Metagenome / Metatranscriptome Family F052217

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052217
Family Type	Metagenome / Metatranscriptome
Number of Sequences	143
Average Sequence Length	87 residues
Representative Sequence	MIPGQAIRNTSYATVFSVIREIEIWRAAVLMVNRYADEAEANSFQRAEELAAEGDHAGAAIWRRVTVAIEQLTDTTGPPN
Number of Associated Samples	102
Number of Associated Scaffolds	143

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	48.59 %
% of genes near scaffold ends (potentially truncated)	39.16 %
% of genes from short scaffolds (< 2000 bps)	91.61 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.937 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (27.273 % of family members)
Environment Ontology (ENVO)	Unclassified (38.462 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.538 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.96% β-sheet: 0.00% Coil/Unstructured: 37.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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SCOP family	SCOP domain	Representative PDB	TM-score
a.118.8.9: TPR-like repeats from PCI (proteasome / COP9 signalosome / eIF3) domains	d3txna1	3txn	0.67839
a.23.1.1: HSC20 (HSCB), C-terminal oligomerisation domain	d1fpoa2	1fpo	0.66427
a.118.17.0: automated matches	d6i2mb_	6i2m	0.65298
a.118.17.0: automated matches	d4a64a1	4a64	0.65278
a.25.1.0: automated matches	d2c2ua_	2c2u	0.65271

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 143 Family Scaffolds
PF02617	ClpS	30.07
PF06627	DUF1153	14.69
PF00313	CSD	10.49
PF00072	Response_reg	4.20
PF13701	DDE_Tnp_1_4	0.70
PF13007	LZ_Tnp_IS66	0.70
PF00083	Sugar_tr	0.70
PF02538	Hydantoinase_B	0.70

COG ID	Name	Functional Category	% Frequency in 143 Family Scaffolds
COG2127	ATP-dependent Clp protease adapter protein ClpS	Posttranslational modification, protein turnover, chaperones [O]	30.07
COG0146	N-methylhydantoinase B/oxoprolinase/acetone carboxylase, alpha subunit	Amino acid transport and metabolism [E]	1.40

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.94 %
Unclassified	root	N/A	37.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.94 %
Unclassified	root	N/A	37.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.94 %
Unclassified	root	N/A	37.06 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	59.44 %
Unclassified	root	N/A	37.06 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	53.85 %
Unclassified	root	N/A	37.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.06 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	36.36 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.50 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.40 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.06 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	36.36 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	2.10 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.40 %
Thalassospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.06 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	36.36 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1.40 %
Magnetospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum	1.40 %
Varunaivibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Varunaivibrio	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.06 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	36.36 %
Magnetospirillum magnetotacticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum magnetotacticum	1.40 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.70 %
Varunaivibrio sulfuroxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Varunaivibrio → Varunaivibrio sulfuroxidans	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.06 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	36.36 %
Magnetospirillum magnetotacticum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum magnetotacticum	1.40 %
Sphingomonas sp. SRS2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SRS2	0.70 %
Varunaivibrio sulfuroxidans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Varunaivibrio → Varunaivibrio sulfuroxidans	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100548131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	1033	Open in IMG/M
3300002245\|JGIcombinedJ26739_100630205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	950	Open in IMG/M
3300002245\|JGIcombinedJ26739_100776552	All Organisms → cellular organisms → Bacteria → Proteobacteria	838	Open in IMG/M
3300003505\|JGIcombinedJ51221_10060297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1461	Open in IMG/M
3300004082\|Ga0062384_100134206	All Organisms → cellular organisms → Bacteria → Proteobacteria	1380	Open in IMG/M
3300004092\|Ga0062389_103949030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300005174\|Ga0066680_10384391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	893	Open in IMG/M
3300005332\|Ga0066388_101389059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1219	Open in IMG/M
3300005435\|Ga0070714_101614179	Not Available	633	Open in IMG/M
3300005435\|Ga0070714_102234272	Not Available	533	Open in IMG/M
3300005436\|Ga0070713_100661996	Not Available	995	Open in IMG/M
3300005436\|Ga0070713_102447763	Not Available	505	Open in IMG/M
3300005439\|Ga0070711_101301875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	630	Open in IMG/M
3300005439\|Ga0070711_101641811	Not Available	562	Open in IMG/M
3300005467\|Ga0070706_100608688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1015	Open in IMG/M
3300005468\|Ga0070707_100871552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	865	Open in IMG/M
3300005471\|Ga0070698_100148751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2290	Open in IMG/M
3300005471\|Ga0070698_100635014	Not Available	1009	Open in IMG/M
3300005518\|Ga0070699_100634488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	975	Open in IMG/M
3300005536\|Ga0070697_101233434	Not Available	667	Open in IMG/M
3300005560\|Ga0066670_10025755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2807	Open in IMG/M
3300005602\|Ga0070762_10371574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	916	Open in IMG/M
3300006102\|Ga0075015_100671151	Not Available	613	Open in IMG/M
3300006163\|Ga0070715_10839693	Not Available	561	Open in IMG/M
3300006173\|Ga0070716_100684463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	782	Open in IMG/M
3300006175\|Ga0070712_100121379	Not Available	1966	Open in IMG/M
3300006175\|Ga0070712_100191857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1599	Open in IMG/M
3300006175\|Ga0070712_100333366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1237	Open in IMG/M
3300006175\|Ga0070712_101449391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	599	Open in IMG/M
3300006176\|Ga0070765_101931977	Not Available	553	Open in IMG/M
3300006755\|Ga0079222_10106827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1487	Open in IMG/M
3300006804\|Ga0079221_10474650	All Organisms → cellular organisms → Bacteria → Proteobacteria	803	Open in IMG/M
3300006954\|Ga0079219_11926825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. SRS2	559	Open in IMG/M
3300007255\|Ga0099791_10455517	Not Available	619	Open in IMG/M
3300009143\|Ga0099792_10564700	Not Available	721	Open in IMG/M
3300009143\|Ga0099792_11063551	Not Available	543	Open in IMG/M
3300009147\|Ga0114129_12078456	Not Available	686	Open in IMG/M
3300010047\|Ga0126382_10563449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	930	Open in IMG/M
3300010047\|Ga0126382_11519391	Not Available	617	Open in IMG/M
3300010048\|Ga0126373_10401377	Not Available	1395	Open in IMG/M
3300010335\|Ga0134063_10616546	Not Available	554	Open in IMG/M
3300010360\|Ga0126372_12875262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	533	Open in IMG/M
3300010376\|Ga0126381_100835205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1324	Open in IMG/M
3300010398\|Ga0126383_10809435	Not Available	1020	Open in IMG/M
3300010400\|Ga0134122_12998385	Not Available	526	Open in IMG/M
3300012202\|Ga0137363_10780451	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	810	Open in IMG/M
3300012205\|Ga0137362_11063577	Not Available	688	Open in IMG/M
3300012361\|Ga0137360_10563511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	973	Open in IMG/M
3300012362\|Ga0137361_10398052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1265	Open in IMG/M
3300012582\|Ga0137358_10425836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	897	Open in IMG/M
3300012582\|Ga0137358_10844657	Not Available	605	Open in IMG/M
3300012923\|Ga0137359_10036267	Not Available	4252	Open in IMG/M
3300012923\|Ga0137359_10722532	Not Available	867	Open in IMG/M
3300012957\|Ga0164303_10194270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1117	Open in IMG/M
3300012960\|Ga0164301_11619063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum magnetotacticum	538	Open in IMG/M
3300012989\|Ga0164305_10431456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1018	Open in IMG/M
3300018468\|Ga0066662_10855065	Not Available	889	Open in IMG/M
3300018482\|Ga0066669_10373895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1195	Open in IMG/M
3300020579\|Ga0210407_10459640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	995	Open in IMG/M
3300020579\|Ga0210407_10774764	Not Available	741	Open in IMG/M
3300020580\|Ga0210403_11216857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	579	Open in IMG/M
3300020581\|Ga0210399_10227562	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300020581\|Ga0210399_10490649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1021	Open in IMG/M
3300020582\|Ga0210395_10820069	Not Available	693	Open in IMG/M
3300020583\|Ga0210401_10232937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1700	Open in IMG/M
3300020583\|Ga0210401_10584300	Not Available	979	Open in IMG/M
3300020583\|Ga0210401_11003970	Not Available	693	Open in IMG/M
3300021088\|Ga0210404_10069608	All Organisms → cellular organisms → Bacteria → Proteobacteria	1707	Open in IMG/M
3300021088\|Ga0210404_10295384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	890	Open in IMG/M
3300021168\|Ga0210406_11142342	Not Available	570	Open in IMG/M
3300021168\|Ga0210406_11312380	Not Available	521	Open in IMG/M
3300021170\|Ga0210400_10515030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	987	Open in IMG/M
3300021171\|Ga0210405_10783996	Not Available	731	Open in IMG/M
3300021171\|Ga0210405_10986244	Not Available	636	Open in IMG/M
3300021171\|Ga0210405_10990808	Not Available	634	Open in IMG/M
3300021178\|Ga0210408_10676617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	814	Open in IMG/M
3300021178\|Ga0210408_10685878	Not Available	807	Open in IMG/M
3300021180\|Ga0210396_10759913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	834	Open in IMG/M
3300021404\|Ga0210389_10363917	All Organisms → cellular organisms → Bacteria → Proteobacteria	1136	Open in IMG/M
3300021404\|Ga0210389_11196925	Not Available	585	Open in IMG/M
3300021405\|Ga0210387_10602616	Not Available	976	Open in IMG/M
3300021406\|Ga0210386_10425374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1146	Open in IMG/M
3300021406\|Ga0210386_10802586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	809	Open in IMG/M
3300021406\|Ga0210386_11469253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	569	Open in IMG/M
3300021432\|Ga0210384_10386540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1260	Open in IMG/M
3300021478\|Ga0210402_10167308	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2010	Open in IMG/M
3300021478\|Ga0210402_11166856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300021560\|Ga0126371_11123609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	924	Open in IMG/M
3300024288\|Ga0179589_10051694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1549	Open in IMG/M
3300024288\|Ga0179589_10395521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	633	Open in IMG/M
3300025898\|Ga0207692_10455203	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300025910\|Ga0207684_10549550	Not Available	988	Open in IMG/M
3300025915\|Ga0207693_10254636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1377	Open in IMG/M
3300025916\|Ga0207663_10659863	Not Available	826	Open in IMG/M
3300025916\|Ga0207663_11641046	Not Available	517	Open in IMG/M
3300025929\|Ga0207664_11648359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	564	Open in IMG/M
3300026356\|Ga0257150_1017251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1002	Open in IMG/M
3300026489\|Ga0257160_1035416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	836	Open in IMG/M
3300026489\|Ga0257160_1065011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300026490\|Ga0257153_1038921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	981	Open in IMG/M
3300026490\|Ga0257153_1039965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	966	Open in IMG/M
3300026490\|Ga0257153_1060425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	770	Open in IMG/M
3300026490\|Ga0257153_1078875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	662	Open in IMG/M
3300026880\|Ga0209623_1002069	Not Available	1057	Open in IMG/M
3300026984\|Ga0208732_1007914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	855	Open in IMG/M
3300027050\|Ga0209325_1029516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	653	Open in IMG/M
3300027070\|Ga0208365_1005602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1512	Open in IMG/M
3300027172\|Ga0208098_1001163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1770	Open in IMG/M
3300027521\|Ga0209524_1003637	All Organisms → cellular organisms → Bacteria	2850	Open in IMG/M
3300027548\|Ga0209523_1060162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Thalassospiraceae → Varunaivibrio → Varunaivibrio sulfuroxidans	779	Open in IMG/M
3300027583\|Ga0209527_1009487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2052	Open in IMG/M
3300027605\|Ga0209329_1002891	All Organisms → cellular organisms → Bacteria	2792	Open in IMG/M
3300027635\|Ga0209625_1005758	All Organisms → cellular organisms → Bacteria → Proteobacteria	2689	Open in IMG/M
3300027729\|Ga0209248_10053785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1233	Open in IMG/M
3300027737\|Ga0209038_10016571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2166	Open in IMG/M
3300027795\|Ga0209139_10187875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	731	Open in IMG/M
3300027824\|Ga0209040_10547288	Not Available	504	Open in IMG/M
3300027884\|Ga0209275_10370936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	804	Open in IMG/M
3300027889\|Ga0209380_10049587	All Organisms → cellular organisms → Bacteria → Proteobacteria	2383	Open in IMG/M
3300027903\|Ga0209488_10100370	All Organisms → cellular organisms → Bacteria → Proteobacteria	2169	Open in IMG/M
3300027903\|Ga0209488_11104751	Not Available	541	Open in IMG/M
3300027903\|Ga0209488_11240644	Not Available	500	Open in IMG/M
3300027908\|Ga0209006_10180988	Not Available	1838	Open in IMG/M
3300028047\|Ga0209526_10237953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1250	Open in IMG/M
3300028047\|Ga0209526_10396616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	916	Open in IMG/M
3300029636\|Ga0222749_10269646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	872	Open in IMG/M
3300029636\|Ga0222749_10373149	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300031231\|Ga0170824_104551323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	653	Open in IMG/M
3300031446\|Ga0170820_11454992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	620	Open in IMG/M
3300031474\|Ga0170818_114427195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	912	Open in IMG/M
3300031474\|Ga0170818_115104149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	849	Open in IMG/M
3300031708\|Ga0310686_115581497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1598	Open in IMG/M
3300031753\|Ga0307477_10493573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	833	Open in IMG/M
3300031753\|Ga0307477_10913165	Not Available	579	Open in IMG/M
3300031754\|Ga0307475_10447087	Not Available	1039	Open in IMG/M
3300031754\|Ga0307475_11397832	Not Available	539	Open in IMG/M
3300031754\|Ga0307475_11430730	Not Available	532	Open in IMG/M
3300031823\|Ga0307478_11640485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Magnetospirillum → Magnetospirillum magnetotacticum	531	Open in IMG/M
3300031823\|Ga0307478_11731050	Not Available	515	Open in IMG/M
3300031910\|Ga0306923_12522229	Not Available	506	Open in IMG/M
3300032174\|Ga0307470_11089307	Not Available	642	Open in IMG/M
3300032205\|Ga0307472_101182468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	729	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.30%
Host-Associated	Host-Associated	0.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.41%
Aquatic	Environmental → Aquatic	4.90%
Plants	Host-Associated → Plants	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.41%
Freshwater	Environmental → Aquatic → Freshwater	4.20%
Sediment	Environmental → Aquatic → Sediment	0.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.24%
Loam	Environmental → Terrestrial → Soil → Loam	32.17%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.06%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.28%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	27.27%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.19%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.90%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	4.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.80%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.10%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.40%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.40%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.70%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026490	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-A	Environmental	Open in IMG/M
3300026880	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300026984	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF048 (SPAdes)	Environmental	Open in IMG/M
3300027050	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027172	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1005481311	3300002245	Forest Soil	YAPADNIRTNRRLSASPMIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAVELAAEGDHAGAAIWRRITVAIEQLTDTTGLPN*
JGIcombinedJ26739_1006302052	3300002245	Forest Soil	MFLKVRAKEGSANPVFLVQAIRNTRSAIVPSVIPEIEIWRVAVLMVSRYADEAEANSFVRAEELAAEGDHAGAAIWRRVTVAIEQLTDTTGPPN*
JGIcombinedJ26739_1007765522	3300002245	Forest Soil	MIPGQAIRNTSYATVFSVIREIEIWRVAVLMVNRYAGDAEANSFRRAVELAAEGDHAGAAIWRRVTVAIDQLTDTTGPLN*
JGIcombinedJ51221_100602972	3300003505	Forest Soil	MFPKVQAKEGSANPVFLVQAIRNTSSAIVPSVIREIEIWRLAVLMINRYADEAEANSFRRAEELAAEGDHARAAIWRRVTVAIEQLTDTTGPLN*
Ga0062384_1001342063	3300004082	Bog Forest Soil	MIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAMELRPKGESRRSAPKLAAEGDHAGAAIWRRVTVAIEQLTDTTGPPN*
Ga0062389_1039490302	3300004092	Bog Forest Soil	VRYAGLGSKPNFLGQELRNRSFANLPSVIREIDIWRVAVLMVNRYADAAEAKADRCAVELETEGDHTGAANWRRVTVAIERLTDTTGPPH*
Ga0066680_103843912	3300005174	Soil	MRNLTGSGHLLMKIWTKEGSASSVILGQAMRNTSSAIVPSVIREIEIWRVAVLMINRYADEAEANSFRRAEELAAEGDHAGAAVWRRVTVAIEQLTDTTGPLN*
Ga0066388_1013890591	3300005332	Tropical Forest Soil	GQAIRNTSSAIVLRVLREIEIWRAAVLMLSRYAGDAEANSLRRAGELRPKCESRRSAPKLAAEGDHAGAAIWRRITVRQLTDTRGPPNC*
Ga0070714_1016141792	3300005435	Agricultural Soil	VIREIEIWGVAVLMINRYADDAEAKGFGRAVELRPKGESRRSAPKLAAEGDHAGAAIWRRVTVAIEQLTDTTVPLN*
Ga0070714_1022342722	3300005435	Agricultural Soil	RTKEGSACPVLLGQAIRNTRSANVPSVIREIEIWRVAVLMVNRYADEAEANSFMRAEELRPEGESRRSAPKLAAEGDHAGAAIWRRVTIAIEQLTDTTGPPN*
Ga0070713_1006619962	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRNLSGSGHRPTDPDQGGSASSVFLGQAIRKTSSATVPSVIREIEIWRVALLMVNRYADEAEANSFGRAEELAAEGDHAGAAIWRRVTVAIEQLTDTTGSLN*
Ga0070713_1024477631	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAMELRPKGESRRSAPKLAAEGDHAGAAIWRRITVAIEQLTDTTGPLN**
Ga0070711_1013018751	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MIPGQAIRNTSSAIVPSVIREIEIWRVAVLMVNRYADEAEANSFQRAEERAAEGDHAGAAIWRRVTIAIEQLTDTTGPPN*
Ga0070711_1016418111	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAMELRPKGESRRSAPKLAAEGDHAGAAIWRRITVAIEQLTDTTGPPN*
Ga0070706_1006086881	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VRNFSGSGRLPRRYGPMRVLACPVLLGQAIRNTSSAIVPNVIREIEIWHVAVLMVNRYADEAEANSFWRAEELAAEGDHTGAAIWRRITVAIEQLTDTTGPLN*
Ga0070707_1008715522	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRGWACPVLLGQAIRNTSSAIVPNVIREIEIWHVAVLMVNRYADEAEANSFWRAEELAAEGDHAGAAIWRRITVAIEQLTDTTGPLN*
Ga0070698_1001487511	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VRNFSGSARLPRRYGPMRGWACPVLLGQAIRNTSSAIVPNVIREIEIWHVAVLMVNRYADEAEANSFWRAEELAAEGDHAGAAIWRRITVAIEQLTDTTGPLN*
Ga0070698_1006350142	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MKIRTKQGWANPVFLVQAIRNTSSAIVPSMIREIEIWRVAVLMINRYADEAEANSFWRAEELARDGDYAGAAIWRRITVAVEQLTDTTGPLN*
Ga0070699_1006344882	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MRGWACPVLLGQAIRNTSSAIVPNVIREIEIWHVAVLMVNRYADEAEANSFWRAEELAAEGDHTGAAIWRRITVAIEQLTDTTGPLN*
Ga0070697_1012334341	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VIREIEIWGVAVLMINRYADDAEAKGFGRAVELRPKGESRRSAPKLAAEGDHAGATIWRRITVAIEQL
Ga0066670_100257555	3300005560	Soil	MPLVRQFDTGFSVIREIEIWRVAVLMINRYADEAEANSFRRAGERAAEGDHAGAAIWRRVTTDTTGPPDCKCAEGTTG*
Ga0070762_103715741	3300005602	Soil	MIPGQAIRNTRSAIVPSVIPEIEIWRVAVLMVSRYADEAEANSFVHAEELAAEGDHAGAAIWRRITVAIEQLTDTTGPFN*
Ga0075015_1006711511	3300006102	Watersheds	MIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAVELAAEGGHAGAAIWRRITVAIEQLTDTTGLPN*
Ga0070715_108396931	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MIPGQVIRNTSSAIVPSVIREIEIWRVAVLMVNRYADEAEANSFMRAEELRPKGESRRSAPKLAAEGDHAGAAIWRRVTIAIEQLTDTRVPLD*
Ga0070716_1006844632	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	APADNIRTNRRLSASPMIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAMELRPKGESRRSAPKLAAEGDHAGAAIWRRITVAIEQLTDTTGPPN*
Ga0070712_1001213795	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VIREIEIWGVAVLMINRYAGDAEAKGFGRAVELRPKGESRRSAPKLAAEGDHAGATIWRRITVAIEQLTDTTGPLN*
Ga0070712_1001918572	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAVELAAEGDHAGAAIWRRITVAIEQLTDTTGLPN*
Ga0070712_1003333662	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MIPGQVIRNTSSAIVPSVIREIEIWRVAVLMVNRYADEAEANSFMRAEELAAEGDQAGAAIWRRVTVAIEQLIDTTGPLN*
Ga0070712_1014493912	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MIPGQAIRNTRSAIVLGVIPEIEIWRVAVRMINRYADDAEANSFMRAEELVAEGDHAGAAIWRRITVAIEQLTDTTGRRARL*
Ga0070765_1019319771	3300006176	Soil	MIPGQAVRNTSSAIVPGVVREIEIWRVALLMVNRYADEAEANSFRRSLELRPKCESRRSAPKLAAQGDHAGAAIWRRITVAIEQLTDTTGPPN*
Ga0079222_101068272	3300006755	Agricultural Soil	MSPGHAIRNASSAIVPSVIREIEIWRVAVLMVNRYADEAEANSFLRAEESAAEGDHAGAAIWRRITVAIEQLTDTTGPFN*
Ga0079221_104746501	3300006804	Agricultural Soil	KEGSTNPVFLVQANRNTRSAILLGVIPEIEFWRIAVLMVNRYADEAEANSFMRAEELVAEGDHAGAAIWRRITVAIEQLTDTTGPFN*
Ga0079219_119268251	3300006954	Agricultural Soil	MIPGQAIRNTRSAIVLGVIPEIEIWRVAVRMINRYADDAETNSFMRAEELVAEGDHAGAAIWRRITVAIEQLTDTTGPPN*
Ga0099791_104555172	3300007255	Vadose Zone Soil	FPRQAIRNINRATLPGVIREINIWRVAVLMVNRYADEAKANSDRRAEELATDGDHAGAAIWRRVKVAIEQLTDTTGPPH*
Ga0099792_105647001	3300009143	Vadose Zone Soil	VYAPADNIQTNRRLSASPMIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAMELAAEGDHAGAAIRRRITVAIEQLTDTTGLPN*
Ga0099792_110635511	3300009143	Vadose Zone Soil	RTKEGSACPVLLGQAIRNTSSANIPSVIREIEIWGVAVLMVNRYADEAEANSFRRAEELAAEGDHAGAAIWRRVTVAIEQLTDTTGPPN*
Ga0114129_120784561	3300009147	Populus Rhizosphere	DNEGPDPRGFGQSCFSVQAIRNTSCAIVPSVIREIDIWRVAVLMVNRYGDQAKTNSQRRAEELATNSDHAGAAIWRRVTVAIEQLTDTTGPLN*
Ga0126382_105634491	3300010047	Tropical Forest Soil	IQGVSLIHLLTTSGPIRLSASRMIPGQAIRNTSSAIVLGVLPEIEIWRAAVLMLSRDAGDAEANSLRRAGELRPKCESRRSAPKLAAEGDHAGAAIWRRITVRQLTDTRGPPNC*
Ga0126382_115193911	3300010047	Tropical Forest Soil	MNPGQAIRNTSSAIVLRVLPEIEIWRAAVLMLSRYACDAEAKSFRRAVELAAEGDQAGAAIWRRITGAIEQLTDTTGPPN*
Ga0126373_104013771	3300010048	Tropical Forest Soil	PRASRSSNSKQNSAIVPSVLREIEIWRVAALMVSRYAGEAETNSFRRAAESAAEGDHAGAAIWRRITVAIEQLTNTSGPPN*
Ga0134063_106165461	3300010335	Grasslands Soil	MAEHIGRSRNLTGSGYLLIKIRTKEGSANPAFLIQAIRNTSSAIVPSVIREIEIWRVAVLMINRYVDKAKANSFQRTEELAAEGDHARAAIWRRVTVAIGQLTDTTGPLN*
Ga0126372_128752621	3300010360	Tropical Forest Soil	NTSSAIVLRVLREIEIWRAAVLMLSRYAGDAEANSLRRAGELRPKCESRRSAPKLAAEGDHAGAAIWRRITVAIEQLTDTTGPPN*
Ga0126381_1008352052	3300010376	Tropical Forest Soil	MIPGQAIRNTSSAIVLGVLPEIEIWRAAVLMLSRYACDAEAKSFRRAVELAAEGDQAGAAIWRRITGAIEQLTDTTGPPN*
Ga0126383_108094352	3300010398	Tropical Forest Soil	MMPGQAIRNICFAIAIRVLREIEIWRAAVLMLSRYAGDAEANSFRRTVELAAKGDHAGAAIWRRITVAIEQLTDTTGVPN*
Ga0134122_129983851	3300010400	Terrestrial Soil	TRTGPGAPRGSALQAIRNTRSAIVPSVIREIEICRVTVLMLSRYADEAEANSFRRAEERAAEGDHAGAAIWRRVTMAIEQITDTTRPPN*
Ga0137363_107804511	3300012202	Vadose Zone Soil	MKIRSKDGSANPVFLGQTIRNTSSAIVPSMIREIEIWRVAVLMINRYADEAEANSFWRAEELTAEGDHAGAAIWRRVTVAIERLTDTTGPLN*
Ga0137362_110635771	3300012205	Vadose Zone Soil	MIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAMELAAEGDHAGAAIWRRITVAIEQLTDTTGLPN*
Ga0137360_105635112	3300012361	Vadose Zone Soil	MKIRTKEGSASPVFLGQAIRNTSSAIVPSVIREIEIWRVAVLMVNRYADEAEANSFRRAEERAAEGDHAGAAIWRRITVAIEQLTDTTGPFN*
Ga0137361_103980522	3300012362	Vadose Zone Soil	MKIRTKEGSASPVFLGQAIRNTSSAIVPSVIREIEIWRVAVLMVNRYADEAEANSFRRAEELTAEGDHAGAAIWRRITIAIEQLTDTTGPLN*
Ga0137358_104258361	3300012582	Vadose Zone Soil	MIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRCAMELCPKGESRRSAPKLAAEGDHAGAAIWRRVTVAIEQPTDTTGPPN*
Ga0137358_108446571	3300012582	Vadose Zone Soil	GRSLNLTGSGYLLIKIRTKEGSANPAFLIQAIRNTSSAIVPSVIREIEIWRVAVLMVNRYADEAEANSFRRAMELAAEGDHAGAAIWRRITVAIEQLTDTTGLPN*
Ga0137359_100362674	3300012923	Vadose Zone Soil	MKIRSKDGSANPVFLGQTIRNTSSAIVPSMVREIEIWRVAVLMINRYADEAEANSFWRAEELARDGDYAGAAIWRRITVAVEQLTDTTGPLN*
Ga0137359_107225321	3300012923	Vadose Zone Soil	MAEHIGRSRNLTGSGYLLIKIRTKEGSANPAFLIQAIRNTSSAIVPSVIREIEIWRVAVLMINRYADKAEANSFQRAEQLAAEGDHARAAIWRRVTVAIGQLTDTTGPLN*
Ga0164303_101942702	3300012957	Soil	MIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAMELRPKGESRRSAPKLAAERDHAGAAIWRRITFAIEQLT
Ga0164301_116190631	3300012960	Soil	MIPGQAIRNTSYATVFSVIREIEIWRAAVLMVNRYADEAEANSFQRAEELAAEGDHAGAAIWRRVTVAIEKLKTREVRIRRSPAAQSMSSCG*
Ga0164305_104314562	3300012989	Soil	MIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAVELRPKGESRRSAPKLAAEGDHAGAAIWRRITVAIEQLTDTTGPLN*
Ga0066662_108550651	3300018468	Grasslands Soil	MAEHIGRSRNLTGSGYLLIKIRTKEGSANPAFHIQAIRNTSSAIVPSVIREIEIWRVAVLMINRYADKAEANSFQRAEQLAAEGDHAGAAIWRRITGAIEQLTDMTGIMLPSRRGRTI
Ga0066669_103738951	3300018482	Grasslands Soil	MPLVRQFDTGFSVIREIEIWRVAVLMINRYADEAEANSFRRAGERAAEGDHAGAAIWRRVTTDTTGPPDCKCAEGTTG
Ga0210407_104596402	3300020579	Soil	MFPKVQAKEGSANPVFLVQAIRNTSSAIVPSVIREIEIWRLAVLMINRYADEAEANSFRRAEELAAEGDHARAAIWRRVTVAIEQLTDTTGPLN
Ga0210407_107747642	3300020579	Soil	MKIRTKQGWANPVFLVQAIRNTSSAIVPSMIREIEIWRVAVLMINRYADEAEANSFWRAEELARDCDYAGAAIWRRITVAVEQLTDTTGPLN
Ga0210403_112168571	3300020580	Soil	GTLMFLKVRAKEGSANPVFLVQAIRNTRSAIVPSVIPEIEIWRVAVLMVSRYADEAEANSFVHAEELAAEGDHAGAAIWRRITVAIEQLTDTTGPFN
Ga0210399_102275621	3300020581	Soil	MIPGQAIRNTRSAIVPSVIREIEIWRVAVLMVDRYADEAEANSFMRAMELAAEGDHAGAAIWRRVTVAIEQLSDTTGPPN
Ga0210399_104906492	3300020581	Soil	AIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAVELAAEGDHAGAAIWRRITVAIEQLTDTTGPPN
Ga0210395_108200691	3300020582	Soil	VIREIEIWRVAVLMANRYAGDADANSFRRAVELRPKGESRRSAPKLAAEGDHAGAAIWRRITVAIEPA
Ga0210401_102329372	3300020583	Soil	VIREIEIWRVAVLMIKRHADVAEANSFRRAEELRPKGESRRSAPKLAAEGDHAGAAIWRRITVAIEQLTDTTTPPN
Ga0210401_105843001	3300020583	Soil	LNAKSQISTPALEIRTKPGSATPVFLVQAIRNTSSVIVPTSVIREIEIWRVAVLMVNRYADEAEANSFQRAEERAAEGDHAGAAIWRRITVAIEQL
Ga0210401_110039701	3300020583	Soil	MTPGQAIRNTSYATVFSVIREIEIWHAAVLMLSRYAGDAEANSFQRAVELRPKCESRRSAPKLAADGDHAGAAIWRRVTVAIEQLTDTTGPPN
Ga0210404_100696083	3300021088	Soil	TTANKIRTKEGSACPVLLGQAIRNTRSAIVPSVIREIEIWRVAVLMVNRYADEAEANSFMRAEELAAEGDDAGAAIWRRVTVAIEQLTDTTVPLN
Ga0210404_102953843	3300021088	Soil	GSANPVFLVQAIRNTSSAIVPSVIREIEIWRLAVLMINRYADEAEANSFRRAEELAAEGDHARAAIWRRVTVAIEQLTDTTGPLN
Ga0210406_111423421	3300021168	Soil	MFPKVQAKEGSANPVFLVQAIRNTSSAIVPSVIREIEIWRLAVLMINRYADEAEANSFRRAEELAAEGDHARAAIWRRVTVA
Ga0210406_113123801	3300021168	Soil	QSSVKHPKHKVCYLPGVIREIEIWRVAVLMVNRYADEAEANSFMRAEELRPKRESRRSAPKLAAEGDHAGAAIWRRITVAIEQLTDTTGTPN
Ga0210400_105150303	3300021170	Soil	AIRNTSSAIVPSVIREIEIWRVAVLMVNRYADEAEANSFMRAEELAAEGDDAGAAIWRRVTVAIEQLTDTTVPLN
Ga0210405_107839961	3300021171	Soil	MIPGQAIRNTRSAIVPGVIREIEIWRVAVLIINRYADEAGANSFQRAEELRPKCESRRSAPKLAAEGNHAGAAIWRRVTVAIEQLTDTTGPLNS
Ga0210405_109862441	3300021171	Soil	AGEYAPADNIRTNRRLSASPMIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAVELAAEGDHAGAAIWRRITVAIEQLTDTTGPPN
Ga0210405_109908081	3300021171	Soil	MIPGQAIRNTRSANIPSVIREIKIWRVAVLMVSRYADEAEANSFVRAEELRPKCESRRSAPKLAAEGDHAGAAIWGRITVAIEPA
Ga0210408_106766172	3300021178	Soil	PRRYGSMRGWACPVLLGQAIRNTSSAIVPNVIREIEIWHVAVLMVNRYADEAEANSFWRAEELAAEGDHAGAAIWRRITVAIEQLTDTTGPLN
Ga0210408_106858782	3300021178	Soil	YAGDAEANSFRRAVELAAEGDHAGATIWRRITVAIEQLTDTTGLPNSRFRFRPSEPSELPDPFDRRPHRR
Ga0210396_107599132	3300021180	Soil	MIPGQAIRKTSYATVFSVIREIEIWRVAVLMVNRYADEAEANSFQRAEELTAEGDHAGAAIWRRVTVAIEQLTDTTGPPN
Ga0210389_103639173	3300021404	Soil	ACPVLLGQAIRNTRSAIVPSVIREIEIWRVAVLMVNRYADEAEANSFMRAEELAAEGDDAGAAIWRRVTVAIEQLTDTTVPLN
Ga0210389_111969251	3300021404	Soil	LQAIRNTSSTVVPSVIREIEIWRVAVLMIKRHADVAEANSFRRAEELRPKGESRRSAPKLAAEGDHAGAAIWRRITVAIEQLTDTTTPPN
Ga0210387_106026161	3300021405	Soil	MIPGQAIRNRSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAMELRPKGESRRSAPKLAAEGDHAGAAIWRRITVAIEPA
Ga0210386_104253742	3300021406	Soil	MRNLTDLDTCNKIRTDEGSTNPVLLGQVIRNTSSAIIPSVIREIEIWRVAVLMVNRYADEAEANSFQRAEELAAEGDHAGAAIWRRITVAIEQLTDTTGPFN
Ga0210386_108025861	3300021406	Soil	AVLMLSRYAGDAEANSFRRAVELRPKCESRRSAPKLAADGDHAGAAIWRRVTVAIEQLTDTTGPPN
Ga0210386_114692532	3300021406	Soil	KHKLCYRPSVIREIEIWRVAVLMIKRHADEAEANSFRRAEELRPKGESRRSAPKLAAEGDHAGAAIWRRITVAIEQLTDTTTPPN
Ga0210384_103865402	3300021432	Soil	MIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANCFRRAVELAAEGDHAGAAIWRRITVAIEQLTDTTGPPN
Ga0210390_113581611	3300021474	Soil	MIPGQAIRNTRSAIVPSVIREIEIWRVAVLMVNRYADEAEANSFMRAEELAAEGDDAGAAIWRRVTVAIE
Ga0210402_101673084	3300021478	Soil	TNRRLSASPMIPGQAIRNTSYATVFSLIREIEIWRVAVLMVNRYAGDAEANSFRGAVELAAEGEHAGAAIWRRVTVAIDQLTDTTGPLN
Ga0210402_111668561	3300021478	Soil	RRLSASPMIPGQAIRNTRSAIVPSVIREIEIWRVAVLMVDRYADEAEANSFMRAMELAAEGDHAGAAIWRRVTVAIEQLSDTTGPPN
Ga0126371_111236091	3300021560	Tropical Forest Soil	GPIRLSASRMIPGQAIRNTSSAIVLGVLPEIEIWRAAVLMLSRYNGDAEANSFRRAVVLRTKCESRRSAPKLAAEGDHAGAAIWRRITVAIEQLTDTMGPPN
Ga0179589_100516941	3300024288	Vadose Zone Soil	MLSLGSGCRNVSSAIVSSVIREIEMWRVAVLMVNRYADEAEANSFLRAEERAAEGDHAGAAIWRRATIAIEQLTNTTGPLN
Ga0179589_103955211	3300024288	Vadose Zone Soil	AIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAMELCPKGESRRSAPKLAAEGDHAGAAIWRRVTIAIEQLTDTTGPPN
Ga0207692_104552032	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VIREIEIWRAAVLMLSRYAGDAEANSFRRAMELRPKGESRRSAPKLAAEGDHAGAAIWRRVTVAIEQLTDTT
Ga0207684_105495501	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRVLACPVLLGQAIRNTSSAIVPNVIREIEIWHVAVLMVNRYADEAEANSFWRAEELAAEGDHTGAAIWRRITVAIEQLTDTTGPLN
Ga0207693_102546363	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRNLTGSGRLPTRSGRKRGSACPVLLGQAIRNTRSAIVLSVIREIEIWRIAVLMVNRYADEAEANSFMRAEELAAEGDQAGAAIWRRVTVAIEQLIDTTGPLN
Ga0207663_106598631	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	GGSASSVFLGQAIRKTSSATVPSVIREIEIWRVALLMVNRYADEAEANSFGRAEELAAEGDHAGAAIWRRVTVAIEQLTDTTGSLN
Ga0207663_116410461	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	TQTKEGSACPVFLGEAIRNTSSAIVPSVMREIEIWRAAMLMINRYADEAEANSFQRAEELAAEGDHAGAAIWRRITVAIEQLTDTTGPLN
Ga0207664_116483592	3300025929	Agricultural Soil	TSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAMELRPKGESRRSAPKLAAEGDHAGAAIWRRITVAIEQLTDTTGPPN
Ga0257150_10172512	3300026356	Soil	MLSLGSGCRNVSSAIVSSVIREIEIWRVAVLMVNRYADEAEANSFLRAEERAAEGDHAGAAIWRRVTIAIEQLTDTTGPPN
Ga0257160_10354161	3300026489	Soil	MLSLGSGCRNVSSAIVSSVIREIEIWRVAVLMVNRYADEAEANSFLRAEEREAEGDHAGAAIWRRVTIAIEQLTDTTGPPN
Ga0257160_10650112	3300026489	Soil	QAIRNTSSAIVLSVIREIEIWRVAVLTINRYADEAEANSFRRAEELRPKGESRRSAPKLAAEGDHAGAAIWRRVTVAIEQLTDTTGPPN
Ga0257153_10389211	3300026490	Soil	GCRNVSSAIVSSVIREIEIWRAAVLMLSRYAGDAEANSFRRALELAAEGDHAGAAIWRRITVAIEQLTDTMGPLN
Ga0257153_10399652	3300026490	Soil	MNLRTKQGSANPIFLGQTIRNTSSAIVPSMIREIEIWRVAVLMINRYADEAEANSVWRAEELARDGDYAGAAIWRRITVAVEQLTDTTGPLN
Ga0257153_10604251	3300026490	Soil	NTSSAIVLSVIREIEIWRVAVLMINRYADEAEANSFRRAEELRPKGESRRSAPKLAAEGDHAGAAIWRRVTVAIEQLTDTTGPPN
Ga0257153_10788752	3300026490	Soil	RYVRSIRQTQPDIRPGATMLSLGSGCRNVSSAIVSSVIREIEIWRVAVLMVNRYADEAEANSFLRAEEREAEGDHAGAAIWRRVTIAIEQLTDTTGPPN
Ga0209623_10020691	3300026880	Forest Soil	FLVQAIRNTRSAIVPSVIPEIEIWRVAVLMVSRDADEAEANSFRRAEERAAEGDHAGAAIWRRVTVAIEQLTDTTGPLN
Ga0208732_10079141	3300026984	Forest Soil	MIPGQAIRNASSAYRPSVIREIEIWRVAVLMINRYADEAEANSFRRAEERAAEGDHAGAAIWRRVTVAIEHLTDTTGP
Ga0209325_10295162	3300027050	Forest Soil	VIREIEIWRVAVLMVNRYADEAEANSFPACRGASPEGRVSRRSAPKLAADGDHAGAAIWRRVTVAIEQLTDTTQPLN
Ga0208365_10056022	3300027070	Forest Soil	MIPGQAIRNTSYATVFSVIREIEIWRVALLMVNRYAGDAEANSFRRAVELAAEGDHAGAAIWRRVTVAIEQLTDTTGPLN
Ga0208098_10011633	3300027172	Forest Soil	MIPGQAIRNTRSAIVPSVIREIEIWRVAVLMVNRYADEAEANSFRRAEERAAEGDHAGAAIWRRVTVAIEHLTDTTGPLI
Ga0209524_10036372	3300027521	Forest Soil	MISGQAIRNTSYATVFSVIREIEIWRVAVLMINRYADEAEANSFRRAGERAAEGDHAGAAIWRRITVAIEQLTDTTGPPN
Ga0209523_10601621	3300027548	Forest Soil	MPLVRQFDTGFSVIREIEIWRVAVLMINRYADEAEANSFRRAGKRAAEGDHAGAAIWRRVTTDTTGPPDCKCAEGTTG
Ga0209527_10094872	3300027583	Forest Soil	MIPGQAIRNTSYATVFSVIREIEIWRVAVLMVNRYAGDAEANSFRRAVELAAEGDHAGAAIWRRITVAIEQLTDTTGLPN
Ga0209329_10028915	3300027605	Forest Soil	MIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAVELAAEGDHAGAAIWRRVTVAIEQLTDTTGPPN
Ga0209625_10057582	3300027635	Forest Soil	MIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAMELRPKRESRRSAPKLAAEGDHAGAAIWRRITVAIEQSLRTRQTGPLN
Ga0209248_100537852	3300027729	Bog Forest Soil	MIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAMELRPKGESRRSAPKLAAEGDHAGAAIWRRITVAIERLTDTTGPFN
Ga0209038_100165711	3300027737	Bog Forest Soil	MKIRINEGSASAVFSVKQFETQALLSFERDREIEIWRVAVLMVNRYADEAAANSFRRAKELAAKGDHAGAAIWRRVTVAIERLTDTTGPLN
Ga0209139_101878751	3300027795	Bog Forest Soil	GQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAMELRPKGESRRSAPKLAAEGDHAGAAIWRRITVAIEQLTDTTGLPN
Ga0209040_105472881	3300027824	Bog Forest Soil	MSRTEVPLNRGGFPVTAALAVPGVIREIEIWRVAVLMVNRYADEAEANSFLRAEELASVGDHTGAAIWQRVTVAIEQLTDTTGPPN
Ga0209275_103709361	3300027884	Soil	MIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRTVELRPKGESRRSAPKLAAEGDHAGAAIWRRITVAIEQLTDTTGPGTHEAAI
Ga0209380_100495871	3300027889	Soil	MVNVPRRSRPKRGSANPVFLVQAIRNTSSAIVPSVIREIEIWRLAVLMINRYADEAEANSFRRAEELAAEGDHARAAIWRRVTVAIEQLTDTTGPLN
Ga0209488_101003703	3300027903	Vadose Zone Soil	MIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAMELRPKGESRRSAPKLAAEGDHAGAAIWRRVTVAIEQLTDTTGPPN
Ga0209488_111047512	3300027903	Vadose Zone Soil	MFLKVRAKQGSANPVFLVQAIRNTSSANVPSVIREIEIWGVAVLMVNRYADEAEANSFRRAEELAAEGDHAGAAIWRRVTVAIEQLTDTTGPPN
Ga0209488_112406441	3300027903	Vadose Zone Soil	MKIRTKQGWANPVFLVQAIRNTSSAIVPSVIREIEIWRVAVLMINRYADEAEANGFRRAEELTAEGDHAGAAIWRRVTVAIEQLTDTTGPLN
Ga0209006_101809882	3300027908	Forest Soil	MIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAVELAAEGDHAGAAIWRRITVAIEQLTDTTGLPN
Ga0209526_102379532	3300028047	Forest Soil	MIPGQAIRNTSYATVFSVIREIEIWRVAVLMVNRYAGDAEANSFRRAVELAAEGDHAGAAIWRRITVAIEQLTDTMGPLN
Ga0209526_103966161	3300028047	Forest Soil	QSSATVPGVIREIEIWRVAVLMVNRYADVAEANSFQRAEELRPKCESRRSAPKLAAEGDHAGAAIWRRITVAIAQLTDTTGPFN
Ga0222749_102696462	3300029636	Soil	MRKLTDLDTCNKIRTDEGSTNPVLLGQVIRNTSSAIIPSVIREIEIWRVAVLMVNRYADEAEANSFQRAEELAAEGDHAGAAIWRRITVAIEQLTDTTGPFN
Ga0222749_103731492	3300029636	Soil	MIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAVELAAEGDHAGATIWRRITVAIEQLTDTTGLPNSRFRFRPSEPSELP
Ga0170824_1045513232	3300031231	Forest Soil	VQARQSPSRLPGGQAIRNRSPPILPGVLREIDIWRVAVLMVNRYADEAKGKADCRADELETEGDHTGAAIWRRVTVAIERLTDNTGPPH
Ga0170820_114549921	3300031446	Forest Soil	PGQAIRNTSSAIVPSVIREIEIWGVAVLMVNRYADEAEANSFQRAEEPASVGDHAGAAIWRRITVAIEQLTDTTGPLN
Ga0170818_1144271951	3300031474	Forest Soil	SAQKFCCTGHRQQFWIAARHWTMRAIVQAIRNTSSAIVPSVIREIEIWGVAVLMVNRYADEAEANSFQRAEELAAEGDHAGAAIWRRITVAIEQLTDTTGPLN
Ga0170818_1151041492	3300031474	Forest Soil	VIREIVIWRAAVLMLSRYAGDAEANSFRRAMELRPKGESRRSAPKLAAEGDHAGAAIWRRVTVAIEQLTDTTGPPN
Ga0310686_1155814971	3300031708	Soil	MIPGQAIRNTSYATVFSVIREIEIWRAAVLMLSRYAGDAEANSFRRAVELAAEGDHAGAAIWRRITVAIEQLTDTTGPFN
Ga0307477_104935731	3300031753	Hardwood Forest Soil	SYVTVFSVIREIEIWHAAVLMLSRYAGDAEANSFQRAVELRPKCESRRSAPKLAADGDHAGAAIWRRVTVAIEQLTDTTGPPN
Ga0307477_109131651	3300031753	Hardwood Forest Soil	MSIGKWSKFRKIRAKEGSACPVLLGQAIRNTSYATVFSVIREIEIWRVAVLMVNRYAGEAEANSFMRAGERAAEGDHAGAAIWRRVTVAIEQLTNTTGPLN
Ga0307475_104470871	3300031754	Hardwood Forest Soil	IEIWRAVVLMLSRYAGDAEANSFRRAVELRPKGESRRSAPKLAAEGDHAGAAIWRRITVAIEQLTDTTGLPN
Ga0307475_113978321	3300031754	Hardwood Forest Soil	AGLGSKPNLLSQELRNRSFANLPGVIREIDIWRVAVLMVNRYADAAETKADRCADDLETEGDHAGAAIWRRVTVAIEHLTDTTGPPH
Ga0307475_114307301	3300031754	Hardwood Forest Soil	MTPGHAIRNASSAIVPGVVREIEIWRVALLMVNRYAGDAEANSFRRAVELRPKCESRRSAPKLAAEGDHAGAAIWRRVTVAIDQLTDTTGPPN
Ga0307478_116404851	3300031823	Hardwood Forest Soil	MIPGQAIRNTSYATVFSVIREIEIWRAAVLMVNRYADEAEANSFQRAEELAAEGDHAGAAIWRRVTVAIEQLTDTTGPPN
Ga0307478_117310501	3300031823	Hardwood Forest Soil	MTHGHAIRNASSAIVPSVIREIEIWRAAVLMLSRYAGDAETKLAAEGDHAGAAIWRRITVAIEQLTDTTGPLNS
Ga0306923_125222291	3300031910	Soil	SPARAIGGLRRTGSKSNFLSQELRNRSFANLLGVIREIDIWRVAVLMVNRYADAAEARADRCADDLETEGDHTGTAIWRRVTVAIERLTDTTGPLH
Ga0307470_110893072	3300032174	Hardwood Forest Soil	MIPGQAIRNTSYATVFSVRREIEIWRAAVLMLSRYAGDAGANSFRRAMELRPKGESRRSAPKLAAEGDHAGAAIWRRIT
Ga0307472_1011824682	3300032205	Hardwood Forest Soil	MIAGQAIRNTSYATVFSVIHEIEIWRAAVLMLSRYAGDVEANSFQRAVELAAAGNYAGAAIWRRITVAIEQLTD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052217

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences