Metagenome Family F052384

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052384
Family Type	Metagenome
Number of Sequences	142
Average Sequence Length	41 residues
Representative Sequence	GNLARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEY
Number of Associated Samples	33
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	5.11 %
% of genes near scaffold ends (potentially truncated)	95.07 %
% of genes from short scaffolds (< 2000 bps)	88.73 %
Associated GOLD sequencing projects	32
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (88.732 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater (52.817 % of family members)
Environment Ontology (ENVO)	Unclassified (52.817 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (65.493 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.81% β-sheet: 5.41% Coil/Unstructured: 83.78%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF05699	Dimer_Tnp_hAT	1.41
PF02493	MORN	0.70
PF13833	EF-hand_8	0.70
PF03460	NIR_SIR_ferr	0.70
PF03269	DUF268	0.70
PF13202	EF-hand_5	0.70
PF01209	Ubie_methyltran	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.70
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.70
COG2849	Antitoxin component YwqK of the YwqJK toxin-antitoxin module	Defense mechanisms [V]	0.70
COG4642	Uncharacterized conserved protein	Function unknown [S]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.73 %
All Organisms	root	All Organisms	11.27 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.73 %
cellular organisms	root	All Organisms → cellular organisms	9.86 %
Viruses	superkingdom	All Organisms → Viruses	1.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.73 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	6.34 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.73 %
Cryptophyceae	class	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	4.93 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.73 %
Pyrenomonadales	order	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales	4.23 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.73 %
Geminigeraceae	family	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae	4.23 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.41 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.73 %
Guillardia	genus	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia	3.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.41 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.70 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.73 %
Guillardia theta	species	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta	3.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.41 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.70 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.73 %
Guillardia theta CCMP2712	strain	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta → Guillardia theta CCMP2712	3.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.41 %
Rhodopirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula	0.70 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.73 %
Guillardia theta CCMP2712	strain	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta → Guillardia theta CCMP2712	3.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.41 %
unclassified Rhodopirellula	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → unclassified Rhodopirellula	0.70 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	88.73 %
Guillardia theta CCMP2712	strain	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta → Guillardia theta CCMP2712	3.52 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	1.41 %
Rhodopirellula sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → unclassified Rhodopirellula → Rhodopirellula sp.	0.70 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002447\|JGI24768J34885_10207441	Not Available	661	Open in IMG/M
3300002447\|JGI24768J34885_10312554	Not Available	527	Open in IMG/M
3300005528\|Ga0068872_10138849	All Organisms → cellular organisms → Bacteria → Proteobacteria	1424	Open in IMG/M
3300005662\|Ga0078894_10827383	Not Available	808	Open in IMG/M
3300007593\|Ga0102918_1133628	Not Available	745	Open in IMG/M
3300007600\|Ga0102920_1289863	Not Available	527	Open in IMG/M
3300008113\|Ga0114346_1173517	Not Available	892	Open in IMG/M
3300008117\|Ga0114351_1278131	Not Available	808	Open in IMG/M
3300008119\|Ga0114354_1249822	Not Available	569	Open in IMG/M
3300008258\|Ga0114840_1031664	Not Available	864	Open in IMG/M
3300008259\|Ga0114841_1004310	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae	7748	Open in IMG/M
3300008259\|Ga0114841_1062966	Not Available	1749	Open in IMG/M
3300008259\|Ga0114841_1077534	Not Available	1516	Open in IMG/M
3300008259\|Ga0114841_1081117	Not Available	1469	Open in IMG/M
3300008259\|Ga0114841_1089976	Not Available	2414	Open in IMG/M
3300008259\|Ga0114841_1096858	Not Available	1292	Open in IMG/M
3300008259\|Ga0114841_1104332	Not Available	1223	Open in IMG/M
3300008259\|Ga0114841_1125231	Not Available	1066	Open in IMG/M
3300008259\|Ga0114841_1129544	Not Available	1038	Open in IMG/M
3300008259\|Ga0114841_1137824	Not Available	989	Open in IMG/M
3300008259\|Ga0114841_1162982	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300008259\|Ga0114841_1177871	Not Available	802	Open in IMG/M
3300008259\|Ga0114841_1200405	Not Available	721	Open in IMG/M
3300008259\|Ga0114841_1208629	Not Available	695	Open in IMG/M
3300008259\|Ga0114841_1227771	Not Available	638	Open in IMG/M
3300008259\|Ga0114841_1231443	Not Available	628	Open in IMG/M
3300008259\|Ga0114841_1235659	Not Available	616	Open in IMG/M
3300008259\|Ga0114841_1245489	Not Available	591	Open in IMG/M
3300008259\|Ga0114841_1261314	Not Available	553	Open in IMG/M
3300008259\|Ga0114841_1266756	Not Available	543	Open in IMG/M
3300008259\|Ga0114841_1288937	Not Available	504	Open in IMG/M
3300008261\|Ga0114336_1251656	Not Available	703	Open in IMG/M
3300008264\|Ga0114353_1322858	Not Available	622	Open in IMG/M
3300027154\|Ga0255111_1035747	Not Available	1022	Open in IMG/M
3300027679\|Ga0209769_1171272	Not Available	681	Open in IMG/M
3300027679\|Ga0209769_1247069	Not Available	543	Open in IMG/M
3300027689\|Ga0209551_1072848	Not Available	1125	Open in IMG/M
3300027836\|Ga0209230_10040001	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta → Guillardia theta CCMP2712	2406	Open in IMG/M
3300027836\|Ga0209230_10092775	Not Available	1667	Open in IMG/M
3300027836\|Ga0209230_10109366	Not Available	1544	Open in IMG/M
3300027836\|Ga0209230_10151143	Not Available	1322	Open in IMG/M
3300027836\|Ga0209230_10213903	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta → Guillardia theta CCMP2712	1109	Open in IMG/M
3300027836\|Ga0209230_10277173	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → unclassified Rhodopirellula → Rhodopirellula sp.	966	Open in IMG/M
3300027836\|Ga0209230_10287049	Not Available	948	Open in IMG/M
3300027836\|Ga0209230_10568425	Not Available	638	Open in IMG/M
3300027836\|Ga0209230_10651287	Not Available	585	Open in IMG/M
3300027836\|Ga0209230_10708266	Not Available	554	Open in IMG/M
3300027836\|Ga0209230_10742849	Not Available	537	Open in IMG/M
3300031758\|Ga0315907_10216844	Not Available	1598	Open in IMG/M
3300031758\|Ga0315907_10226903	Not Available	1557	Open in IMG/M
3300031758\|Ga0315907_10429283	Not Available	1059	Open in IMG/M
3300031758\|Ga0315907_10436029	Not Available	1049	Open in IMG/M
3300031758\|Ga0315907_10569956	Not Available	883	Open in IMG/M
3300031784\|Ga0315899_10061527	All Organisms → cellular organisms → Eukaryota	3909	Open in IMG/M
3300031784\|Ga0315899_10147596	Not Available	2400	Open in IMG/M
3300031784\|Ga0315899_10174717	Not Available	2179	Open in IMG/M
3300031784\|Ga0315899_10208959	Not Available	1963	Open in IMG/M
3300031784\|Ga0315899_10215739	Not Available	1927	Open in IMG/M
3300031784\|Ga0315899_10272892	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta → Guillardia theta CCMP2712	1680	Open in IMG/M
3300031784\|Ga0315899_10332087	Not Available	1495	Open in IMG/M
3300031784\|Ga0315899_10353003	Not Available	1441	Open in IMG/M
3300031784\|Ga0315899_10423370	Not Available	1291	Open in IMG/M
3300031784\|Ga0315899_10441686	Not Available	1257	Open in IMG/M
3300031784\|Ga0315899_10487332	Not Available	1183	Open in IMG/M
3300031784\|Ga0315899_10518040	All Organisms → Viruses → Predicted Viral	1139	Open in IMG/M
3300031784\|Ga0315899_10575572	Not Available	1066	Open in IMG/M
3300031784\|Ga0315899_10575592	Not Available	1066	Open in IMG/M
3300031784\|Ga0315899_10606844	Not Available	1031	Open in IMG/M
3300031784\|Ga0315899_10664998	Not Available	973	Open in IMG/M
3300031784\|Ga0315899_10687901	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	952	Open in IMG/M
3300031784\|Ga0315899_10720261	Not Available	924	Open in IMG/M
3300031784\|Ga0315899_10823568	Not Available	847	Open in IMG/M
3300031784\|Ga0315899_10872612	Not Available	814	Open in IMG/M
3300031784\|Ga0315899_10909564	Not Available	792	Open in IMG/M
3300031784\|Ga0315899_10978271	Not Available	754	Open in IMG/M
3300031784\|Ga0315899_11002139	Not Available	742	Open in IMG/M
3300031784\|Ga0315899_11006134	Not Available	740	Open in IMG/M
3300031784\|Ga0315899_11092602	Not Available	700	Open in IMG/M
3300031784\|Ga0315899_11200331	Not Available	657	Open in IMG/M
3300031784\|Ga0315899_11250518	Not Available	639	Open in IMG/M
3300031784\|Ga0315899_11251583	Not Available	639	Open in IMG/M
3300031784\|Ga0315899_11259236	Not Available	636	Open in IMG/M
3300031784\|Ga0315899_11329415	Not Available	613	Open in IMG/M
3300031784\|Ga0315899_11662305	Not Available	526	Open in IMG/M
3300031786\|Ga0315908_10171743	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta → Guillardia theta CCMP2712	1788	Open in IMG/M
3300031786\|Ga0315908_10293166	Not Available	1360	Open in IMG/M
3300031786\|Ga0315908_10356857	All Organisms → Viruses → Predicted Viral	1223	Open in IMG/M
3300031786\|Ga0315908_10494601	Not Available	1021	Open in IMG/M
3300031786\|Ga0315908_10580981	Not Available	931	Open in IMG/M
3300031786\|Ga0315908_10625785	Not Available	892	Open in IMG/M
3300031786\|Ga0315908_10746744	Not Available	803	Open in IMG/M
3300031786\|Ga0315908_10872511	Not Available	731	Open in IMG/M
3300031786\|Ga0315908_11037892	Not Available	658	Open in IMG/M
3300031786\|Ga0315908_11259362	Not Available	585	Open in IMG/M
3300031786\|Ga0315908_11618649	Not Available	501	Open in IMG/M
3300031787\|Ga0315900_10813870	Not Available	642	Open in IMG/M
3300031857\|Ga0315909_10754656	Not Available	623	Open in IMG/M
3300031951\|Ga0315904_10451441	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta → Guillardia theta CCMP2712	1149	Open in IMG/M
3300031951\|Ga0315904_11160083	Not Available	597	Open in IMG/M
3300032050\|Ga0315906_10879012	Not Available	691	Open in IMG/M
3300032092\|Ga0315905_10011597	All Organisms → cellular organisms → Eukaryota	8942	Open in IMG/M
3300032092\|Ga0315905_10014385	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	7999	Open in IMG/M
3300032092\|Ga0315905_10022685	Not Available	6359	Open in IMG/M
3300032092\|Ga0315905_10101696	Not Available	2898	Open in IMG/M
3300032092\|Ga0315905_10109198	Not Available	2785	Open in IMG/M
3300032092\|Ga0315905_10231488	Not Available	1803	Open in IMG/M
3300032092\|Ga0315905_10363177	Not Available	1370	Open in IMG/M
3300032092\|Ga0315905_10385866	Not Available	1319	Open in IMG/M
3300032092\|Ga0315905_10439785	Not Available	1215	Open in IMG/M
3300032092\|Ga0315905_10549804	Not Available	1053	Open in IMG/M
3300032092\|Ga0315905_10578238	Not Available	1019	Open in IMG/M
3300032092\|Ga0315905_10636303	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300032092\|Ga0315905_10820446	Not Available	806	Open in IMG/M
3300032092\|Ga0315905_10820711	Not Available	806	Open in IMG/M
3300032092\|Ga0315905_10826561	Not Available	802	Open in IMG/M
3300032092\|Ga0315905_11025398	Not Available	691	Open in IMG/M
3300032092\|Ga0315905_11034201	Not Available	687	Open in IMG/M
3300032092\|Ga0315905_11072079	Not Available	670	Open in IMG/M
3300032092\|Ga0315905_11163309	Not Available	633	Open in IMG/M
3300032092\|Ga0315905_11442814	Not Available	544	Open in IMG/M
3300032092\|Ga0315905_11548365	Not Available	517	Open in IMG/M
3300032116\|Ga0315903_10617206	Not Available	829	Open in IMG/M
3300034095\|Ga0335022_0133118	Not Available	1554	Open in IMG/M
3300034095\|Ga0335022_0173030	Not Available	1316	Open in IMG/M
3300034095\|Ga0335022_0185153	Not Available	1259	Open in IMG/M
3300034095\|Ga0335022_0247476	Not Available	1039	Open in IMG/M
3300034095\|Ga0335022_0346852	Not Available	822	Open in IMG/M
3300034096\|Ga0335025_0484320	Not Available	626	Open in IMG/M
3300034107\|Ga0335037_0275798	Not Available	917	Open in IMG/M
3300034111\|Ga0335063_0564825	Not Available	542	Open in IMG/M
3300034121\|Ga0335058_0153602	Not Available	1347	Open in IMG/M
3300034121\|Ga0335058_0188874	Not Available	1204	Open in IMG/M
3300034121\|Ga0335058_0472712	Not Available	713	Open in IMG/M
3300034167\|Ga0335017_0094081	Not Available	1765	Open in IMG/M
3300034167\|Ga0335017_0626050	Not Available	554	Open in IMG/M
3300034355\|Ga0335039_0441243	Not Available	661	Open in IMG/M
3300034357\|Ga0335064_0621951	Not Available	676	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	98.59%
Marine	Environmental → Aquatic → Marine	1.41%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	52.82%
Lake	Environmental → Aquatic → Freshwater → Lake	32.39%
Lentic	Environmental → Aquatic → Freshwater → Lentic	12.68%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.41%
River	Environmental → Aquatic → Freshwater → River	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	52.82%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	32.39%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	12.68%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.41%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	52.82%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	19.72%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	12.68%
Freshwater And Sediment	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment	9.15%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	3.52%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.41%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002447	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300007593	Estuarine microbial communities from the Columbia River estuary - metaG 1563A-3	Environmental	Open in IMG/M
3300007600	Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3	Environmental	Open in IMG/M
3300008113	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NA	Environmental	Open in IMG/M
3300008117	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NA	Environmental	Open in IMG/M
3300008119	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NA	Environmental	Open in IMG/M
3300008258	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample HABS-E2014-0110-3-NA	Environmental	Open in IMG/M
3300008259	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0132-C-NA	Environmental	Open in IMG/M
3300008261	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NA	Environmental	Open in IMG/M
3300008264	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-53-LTR	Environmental	Open in IMG/M
3300027154	Freshwater microbial communities from St. Lawrence River, New York, United States - Law_Yuk_RepA_8h	Environmental	Open in IMG/M
3300027679	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.DN (SPAdes)	Environmental	Open in IMG/M
3300027689	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SD (SPAdes)	Environmental	Open in IMG/M
3300027836	Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031786	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124	Environmental	Open in IMG/M
3300031787	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300032050	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122	Environmental	Open in IMG/M
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300034095	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091	Environmental	Open in IMG/M
3300034096	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME15Oct2015-rr0098	Environmental	Open in IMG/M
3300034107	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133	Environmental	Open in IMG/M
3300034111	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Oct2011-rr0186	Environmental	Open in IMG/M
3300034121	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19May2015-rr0174	Environmental	Open in IMG/M
3300034167	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME11Apr2015-rr0082	Environmental	Open in IMG/M
3300034355	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Oct2015-rr0135	Environmental	Open in IMG/M
3300034357	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME12May2017-rr0187	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24768J34885_102074412	3300002447	Freshwater And Sediment	RTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEYRVLDVCGSL*
JGI24768J34885_103125542	3300002447	Freshwater And Sediment	KEFRTGRSQGNLARTPDVAVVTPLNNPGGPEGDTVTMAEQLLNTEY*
Ga0068872_101388491	3300005528	Freshwater Lake	GFRTGRSQGNLARTPDMGVVTPLNNPGGPEGDTVTVAGKLLNTEY*
Ga0078894_108273831	3300005662	Freshwater Lake	FRTGRSRGNLARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEY*
Ga0102918_11336282	3300007593	Estuarine	GNLARTPDMAVVPPLNNFMGPEGDTVTVPEQLLNTEYKEPRPP*
Ga0102920_12898631	3300007600	Estuarine	GRSQGNPARTPDMAVVPPLNNFMGPEGDTVTVAQQLLNTEY*
Ga0114346_11735171	3300008113	Freshwater, Plankton	MTPDMAVVTPLNNPGGPEGDTVTVDDQLLNTEILKL
Ga0114351_12781311	3300008117	Freshwater, Plankton	ARTPDVAVVTPLNNFLGPEGDTVTMDEQLLNTEY*
Ga0114354_12498221	3300008119	Freshwater, Plankton	GFRTGRSQGNLARTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEY*
Ga0114840_10316642	3300008258	Freshwater, Plankton	PDMAVVTPLNNPGGPESDTVTVDEQLLNTEYCPA*
Ga0114841_10043101	3300008259	Freshwater, Plankton	GRRRGNLSMTPDMAVVTPLNNPGGPEGDTVTMDEQLLNTEY*
Ga0114841_10629662	3300008259	Freshwater, Plankton	TGRRRGNLSMTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTQYSILKNLE*
Ga0114841_10775341	3300008259	Freshwater, Plankton	NLARTPDMAVVTPLNNPGGPEGDTVTVAEKLLNTEY*
Ga0114841_10811171	3300008259	Freshwater, Plankton	AKEFRTGRSQGNLARTPDVAVVTPLNNFLGPEGDTVTVDTLLNTEY*
Ga0114841_10899761	3300008259	Freshwater, Plankton	GNLARTPDMAVVTPLNNFLGPEGDTVTVDKQLLNTEYC*
Ga0114841_10968583	3300008259	Freshwater, Plankton	RGNLARTPDMAVVTPLNNFLGPEGDTVTVDKQLLNTEYTVTADNHY*
Ga0114841_11043321	3300008259	Freshwater, Plankton	FRTGRSQGNLARTPDMAVVTPLNNPGGPEGDTVTVAETLLNTCPSAVYK*
Ga0114841_11252311	3300008259	Freshwater, Plankton	NLARTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEY*
Ga0114841_11295441	3300008259	Freshwater, Plankton	GNLARTPDVAVVTPLNNFLGPEGDTVTMDEQLLNTEY*
Ga0114841_11378241	3300008259	Freshwater, Plankton	QGNLARTPDMAVVPPLNNFMGPEGDTVTVAEQLLNTEY*
Ga0114841_11629822	3300008259	Freshwater, Plankton	SMTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEY*
Ga0114841_11778711	3300008259	Freshwater, Plankton	RTPDMAVVTPLNNPGGPESDTVTVDEQLLNTEYCPA*
Ga0114841_12004052	3300008259	Freshwater, Plankton	QGNLARTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEY*
Ga0114841_12086291	3300008259	Freshwater, Plankton	QGNLARTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEYVIMMEH*
Ga0114841_12277712	3300008259	Freshwater, Plankton	LSMTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEY*
Ga0114841_12314432	3300008259	Freshwater, Plankton	RGNLARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEY*
Ga0114841_12356591	3300008259	Freshwater, Plankton	KEFRTGRSRGNLARTPDMAVVTPLNNFLGPEGDTVTVDKQLLNTEY*
Ga0114841_12454891	3300008259	Freshwater, Plankton	NLARTPDMAVVTPLNNPGGPEGDTVTVAEKLLNTEYWG*
Ga0114841_12603881	3300008259	Freshwater, Plankton	QGNLARTPDVAVVTPLNNFLGPEGDTVTMDEQLLNTECLPTEMGL*
Ga0114841_12613141	3300008259	Freshwater, Plankton	GNLARTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEY*
Ga0114841_12667561	3300008259	Freshwater, Plankton	NLSMTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEY*
Ga0114841_12889372	3300008259	Freshwater, Plankton	NLSMTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEY*
Ga0114336_12516561	3300008261	Freshwater, Plankton	TGRSQGNLARTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEY*
Ga0114353_13228581	3300008264	Freshwater, Plankton	MTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEYLGR
Ga0255111_10357471	3300027154	Freshwater	RTPDMAVVTPLNNFLGPEGDTVTVDKQLLNTEYCRTYEVSR
Ga0209769_11712721	3300027679	Freshwater Lake	RGNLSMTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEY
Ga0209769_12470692	3300027679	Freshwater Lake	SQGNLARTPDMAVVPPLNNFMGPEGDTVTVAEQLLNTEY
Ga0209551_10728483	3300027689	Freshwater Lake	TGRRRGNLSMTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEY
Ga0209230_100400011	3300027836	Freshwater And Sediment	RTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEYRVLDVCGSL
Ga0209230_100927753	3300027836	Freshwater And Sediment	GRRRGNLSMTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEY
Ga0209230_101093662	3300027836	Freshwater And Sediment	MGFCSNLARTPDIAVVTPLNNPGGPEGDTVTVDEQLLNTEYWVGS
Ga0209230_101511431	3300027836	Freshwater And Sediment	NLARTPDMAVVTPLNNFLGPEGDTVTVDKQLLNTEY
Ga0209230_102139031	3300027836	Freshwater And Sediment	LAKEFRTGRSQGNPARTPDMAVVPPLNNFMGPEGDTVTVAEQLLNTEY
Ga0209230_102771733	3300027836	Freshwater And Sediment	RRRGNLSMTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEYSP
Ga0209230_102870491	3300027836	Freshwater And Sediment	AKEFRTGRSRGNLARTPDMAVVTPLNNFLGPEGDTVTVDKQLLNTEY
Ga0209230_105684252	3300027836	Freshwater And Sediment	RGNLSMTHDMAVVTPLNNFLGPEGDTVTVDEQLLNTEYCPSRLS
Ga0209230_106512871	3300027836	Freshwater And Sediment	GTSRGNLARTPDMAVVTPLNNPGGPEGDTVTVVEQLLNTEY
Ga0209230_107082661	3300027836	Freshwater And Sediment	RRRGNLSMTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEY
Ga0209230_107428491	3300027836	Freshwater And Sediment	GNLSMTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEY
Ga0315907_102168443	3300031758	Freshwater	NLARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEY
Ga0315907_102269032	3300031758	Freshwater	ARTPDVAVVTPLNNFLGPEGDTVTMVEQLLNTEYSVSGIHT
Ga0315907_104292831	3300031758	Freshwater	ATGFRTGRSQGNLVRTPDVAVVTPLNNFLGPEGDTVTMVKQLLNTEY
Ga0315907_104360291	3300031758	Freshwater	MTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEYWGQVE
Ga0315907_105699561	3300031758	Freshwater	TGRSRGNLARTPDMAVVPPLNNFMGPEGDTVTVAEPLLNTEYWGTPQTPTD
Ga0315899_100615272	3300031784	Freshwater	MTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEYFTKP
Ga0315899_101475965	3300031784	Freshwater	RRGNLSMTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEYL
Ga0315899_101747173	3300031784	Freshwater	GRSQGNLARTPDMGVVTPLNNPGGPEGDTVTVAEKLLNTEY
Ga0315899_102089591	3300031784	Freshwater	TGFRTGRRRGNLSMTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEYWGQVE
Ga0315899_102157391	3300031784	Freshwater	LARTPDMAVVTPLNNPGGPEGDTVTVAEKLLNTEY
Ga0315899_102728923	3300031784	Freshwater	TGRSQGNLARTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEYRVLDVCGSL
Ga0315899_103320871	3300031784	Freshwater	LARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEYRSTMQL
Ga0315899_103530031	3300031784	Freshwater	QGNLARTPDVAVVTPLNNFLGPEGDTVTVDTLLNTEY
Ga0315899_104233702	3300031784	Freshwater	SQGNLARTPDVAVVTPLNNFLGPEGDTVTMDEQLLNTEY
Ga0315899_104416861	3300031784	Freshwater	GNLARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEY
Ga0315899_104873322	3300031784	Freshwater	RGNLSMTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEY
Ga0315899_105180401	3300031784	Freshwater	TGRSRGNLARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEYRHSVRQSR
Ga0315899_105755721	3300031784	Freshwater	MTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEYWSCG
Ga0315899_105755923	3300031784	Freshwater	QGNLARTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEY
Ga0315899_106068442	3300031784	Freshwater	RSRGNLARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEYCV
Ga0315899_106649981	3300031784	Freshwater	SQGNLARTPDMGVVTPLNNPGGPEGDTVTVAEKLLNTEY
Ga0315899_106879011	3300031784	Freshwater	GRSRGNLARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEYCIHNR
Ga0315899_107202612	3300031784	Freshwater	LARTPDMAVVTPLNNFLGPEGATVTVDKQLLNTEYCYG
Ga0315899_108235681	3300031784	Freshwater	QGNLARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEYLESPLLLNY
Ga0315899_108726121	3300031784	Freshwater	KEFRTGRSRGNLARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEY
Ga0315899_109095642	3300031784	Freshwater	RRGNLSMTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEY
Ga0315899_109782712	3300031784	Freshwater	NLSMTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEY
Ga0315899_110021391	3300031784	Freshwater	TGRSQGNLARTPDMAVVTPLNNPGGPEGDTVTVAEKLLNTEYRS
Ga0315899_110061342	3300031784	Freshwater	GNLARTPDMAVATPLNNFLGPEGATVTVDKQLLNTEY
Ga0315899_110926021	3300031784	Freshwater	GRSRGNLARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEY
Ga0315899_112003311	3300031784	Freshwater	SQGNLARTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEYXMHEG
Ga0315899_112505181	3300031784	Freshwater	RSQGNLARTPDMAVVTPLNNPGGPEGDTVTVAEKLLNTEY
Ga0315899_112515831	3300031784	Freshwater	NLARTPDMAVVPPLNNFMGPEGDTVTVAEQLLNTEY
Ga0315899_112592361	3300031784	Freshwater	GRSRGNLARTPDMAVDPPLNNFMGPEGVTVTVAQQLLNTEY
Ga0315899_113294151	3300031784	Freshwater	GNLSMTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTE
Ga0315899_116623051	3300031784	Freshwater	GRSRGNLARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEYWTKH
Ga0315908_101717433	3300031786	Freshwater	LAKEFRTGRSQGNLARTPDMVVVPPLNNFMGPEGDTVTVAEQLLNTEY
Ga0315908_102931663	3300031786	Freshwater	RGNLARTPDMAVVTPLNNFLGPEGDTVTVDGTITEY
Ga0315908_103568572	3300031786	Freshwater	GNLARTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEY
Ga0315908_104946012	3300031786	Freshwater	GNLSMTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTER
Ga0315908_105809811	3300031786	Freshwater	RGNLARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEY
Ga0315908_106257851	3300031786	Freshwater	RSRGNLARTPDMAVVTPLNNFLGPEGDTVTVDKQLLNTEY
Ga0315908_107467442	3300031786	Freshwater	RRGNLSMTPDMAVVTPLNNPGGPEGDTVTVDAQLLNTEY
Ga0315908_108725112	3300031786	Freshwater	SMTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTETS
Ga0315908_110378922	3300031786	Freshwater	TGFRTGRSQGNLARTPDMAVVTPLNNPGGPEGDTVTVAEKLLNTEY
Ga0315908_112593622	3300031786	Freshwater	ARTPDMAVVTPLNNFLGPEGDTVTVDKQLLNTEYC
Ga0315908_116186491	3300031786	Freshwater	RGNLARTPDMAVVTPLNNPGGPEGDTVTVVEQLLNTEY
Ga0315900_108138701	3300031787	Freshwater	ATGFRTGRSQGNLARTPDVAVVTPLNNFLGPEGDTVTMVKQLLNTEY
Ga0315909_107546561	3300031857	Freshwater	GRSQGNLARTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEYWGQVE
Ga0315904_104514411	3300031951	Freshwater	QGNPARTPDMAVVPPLNNFMGPEGDTVTVAEQLLNTEY
Ga0315904_111600831	3300031951	Freshwater	TPDMAVVTPLNNPGGPEGDTVTVAEKLLNTEYWCSNTGV
Ga0315906_108790121	3300032050	Freshwater	TPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEYWSCG
Ga0315905_1001159710	3300032092	Freshwater	TGFRTGRSQGNLARTTDVAVVTPLNNFLGPEGDTVTMVKQLLNTEY
Ga0315905_100143859	3300032092	Freshwater	SRGNLARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEY
Ga0315905_1002268510	3300032092	Freshwater	EFRTGRSQGNLARTPDVAVVTPLNNPGGPEGDTVTMAEQLLNTEY
Ga0315905_101016961	3300032092	Freshwater	GRRRGNLSMTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEY
Ga0315905_101091983	3300032092	Freshwater	GRSQGNLARTPDMGVVTPLNNPGGPEGDTVTVAGKLLNTEY
Ga0315905_102314881	3300032092	Freshwater	GRSQGNLARTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEY
Ga0315905_103631773	3300032092	Freshwater	RGNLARTPDMAVVTPLNNFLGPEGDTVTVDKQLLNTEY
Ga0315905_103785861	3300032092	Freshwater	LARTPDMGVVTPLNNPGGPEGDTVTVAEKLLNTEY
Ga0315905_103858662	3300032092	Freshwater	TGFRTGRSQGNLARTPDMGVVTPLNNPGGPEGDTVTVAEKLLNTEY
Ga0315905_104397851	3300032092	Freshwater	KEFRTGRSRGNLARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEYRHSVRQSR
Ga0315905_105498042	3300032092	Freshwater	TGRSQGNLARTPDVAVVTPLNNFLGPEGDTVTMVEQLLNTEYSVSGIHT
Ga0315905_105782381	3300032092	Freshwater	GRSRGNLARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEYCV
Ga0315905_106363031	3300032092	Freshwater	RRRGNLSMTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEY
Ga0315905_108204462	3300032092	Freshwater	GRSRGNLARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEYC
Ga0315905_108207112	3300032092	Freshwater	MMARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEY
Ga0315905_108265611	3300032092	Freshwater	ARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEYRSTMQL
Ga0315905_110253981	3300032092	Freshwater	GRSQGNLARTPDMAVVTPLNNPGGPEGDTVTVDTQLLNTEY
Ga0315905_110342011	3300032092	Freshwater	RTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEYVIMMEH
Ga0315905_110720792	3300032092	Freshwater	GRSQGNLARTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEYXMHEG
Ga0315905_111633091	3300032092	Freshwater	NLSMTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEYSP
Ga0315905_114428141	3300032092	Freshwater	TSRGNLARTPDMAVVTPLNNPGGPEGDTVTVVAQLLNTEY
Ga0315905_115483651	3300032092	Freshwater	SYRWGNLARTPDMAVVTPLNNFLGPEGDTVTVDKQLLNTEY
Ga0315903_106172061	3300032116	Freshwater	TGRSRGNLARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEFWSPKEVA
Ga0335022_0067481_2_142	3300034095	Freshwater	SQGNLARTPDVAVVTPLNNFLGPEGDTVTMDEQLLNTECLPTEMGL
Ga0335022_0133118_1430_1552	3300034095	Freshwater	RSQGNLARTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEY
Ga0335022_0173030_1_117	3300034095	Freshwater	QGNLARTPDMAVVTPLNNPGGPEGDTVTVAEKLLNTEY
Ga0335022_0185153_2_106	3300034095	Freshwater	MTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEYCT
Ga0335022_0247476_928_1038	3300034095	Freshwater	NLARTPDMAVVTPLNNPGGPEGDTVTVDGQLLNTEY
Ga0335022_0346852_703_822	3300034095	Freshwater	SQGNLARTPDVAVVTPLNNPGGPEGDTVTMAEQLLNTEY
Ga0335025_0484320_518_625	3300034096	Freshwater	GNLARTPDMAVVTPLNNPGGPEGDTVTVDEQLLNY
Ga0335037_0275798_2_115	3300034107	Freshwater	MTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEYWRVP
Ga0335063_0564825_408_542	3300034111	Freshwater	GNLARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEFWSPKEVA
Ga0335058_0153602_2_154	3300034121	Freshwater	GRSRGNLARTPDMAVVPPLNNFMGPEGDTVTVAEPLLNTEYWGTPQTPTD
Ga0335058_0188874_1082_1204	3300034121	Freshwater	RSQGNLARTPDMAVVTPLNNPGGPEGDTVTVDEKLLNTEY
Ga0335058_0235783_2_115	3300034121	Freshwater	DVAVVTPLNNFLGPEGDTVTIDEQLLNTECLPTEMGL
Ga0335058_0472712_1_132	3300034121	Freshwater	TGRRRGNLSMTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEYL
Ga0335017_0094081_1625_1765	3300034167	Freshwater	TGFRTGRSRGNLARTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEY
Ga0335017_0626050_2_121	3300034167	Freshwater	MTPDMAVVTPLNNFLGPEGDTVTVDEQLLNTEYPESERAS
Ga0335039_0441243_526_660	3300034355	Freshwater	FRTGRSQGNLARTPDMAVVTPLNNPGGPEGDTVTVDEQLLNTEY
Ga0335064_0510719_2_118	3300034357	Freshwater	MAVVTPLNNFLGPEGDTVTMVEQLLNTEYGACYQGSQEF
Ga0335064_0621951_1_126	3300034357	Freshwater	QGNLARTPDMAVVTPLNNPGGPESDTVTVDEQLLNTEYCPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F052384

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences