Metagenome / Metatranscriptome Family F052404

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052404
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	75 residues
Representative Sequence	MADPKSFLDNLKNLRLVMSVALEHAQENRNQFVKNATGNQVRQLERSISQIRTLAEQLEKEFNTLEYLIDKRPPTSAS
Number of Associated Samples	91
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.54 %
% of genes near scaffold ends (potentially truncated)	21.13 %
% of genes from short scaffolds (< 2000 bps)	80.28 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.746 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (45.775 % of family members)
Environment Ontology (ENVO)	Unclassified (38.732 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (47.887 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.55% β-sheet: 0.00% Coil/Unstructured: 42.45%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF00072	Response_reg	14.08
PF07238	PilZ	4.93
PF07589	PEP-CTERM	4.23
PF00313	CSD	2.11
PF08448	PAS_4	2.11
PF07690	MFS_1	2.11
PF01541	GIY-YIG	1.41
PF13466	STAS_2	1.41
PF01842	ACT	1.41
PF02511	Thy1	0.70
PF03795	YCII	0.70
PF13772	AIG2_2	0.70
PF00772	DnaB	0.70
PF13620	CarboxypepD_reg	0.70
PF05163	DinB	0.70
PF00211	Guanylate_cyc	0.70
PF08327	AHSA1	0.70
PF00067	p450	0.70
PF07969	Amidohydro_3	0.70
PF00144	Beta-lactamase	0.70
PF07350	DUF1479	0.70
PF01381	HTH_3	0.70
PF13751	DDE_Tnp_1_6	0.70
PF03602	Cons_hypoth95	0.70
PF12697	Abhydrolase_6	0.70
PF04014	MazE_antitoxin	0.70
PF00083	Sugar_tr	0.70
PF07963	N_methyl	0.70
PF13185	GAF_2	0.70
PF00561	Abhydrolase_1	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	0.70
COG0742	16S rRNA G966 N2-methylase RsmD	Translation, ribosomal structure and biogenesis [J]	0.70
COG1092	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	Translation, ribosomal structure and biogenesis [J]	0.70
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	0.70
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.70
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.70
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.70
COG2124	Cytochrome P450	Defense mechanisms [V]	0.70
COG2242	Precorrin-6B methylase 2	Coenzyme transport and metabolism [H]	0.70
COG2265	tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family	Translation, ribosomal structure and biogenesis [J]	0.70
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.70
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.70
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.70
COG2890	Methylase of polypeptide chain release factors	Translation, ribosomal structure and biogenesis [J]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.75 %
Unclassified	root	N/A	42.25 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.75 %
Unclassified	root	N/A	42.25 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.75 %
Unclassified	root	N/A	42.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.25 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	38.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.52 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.25 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	26.06 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.82 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.06 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.82 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.70 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.70 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.70 %
Legionellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.06 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.82 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.70 %
Legionellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae	0.70 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.70 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.06 %
Acidipila	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila	2.82 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.70 %
Legionella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella	0.70 %
Denitrobaculum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Denitrobaculum	0.70 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.06 %
unclassified Acidipila	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila	2.82 %
Denitrobaculum tricleocarpae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Denitrobaculum → Denitrobaculum tricleocarpae	0.70 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.70 %
Legionella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella	0.70 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.25 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	26.06 %
Acidipila sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	2.82 %
Denitrobaculum tricleocarpae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Denitrobaculum → Denitrobaculum tricleocarpae	0.70 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	0.70 %
Legionella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella	0.70 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001137\|JGI12637J13337_1012876	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300001593\|JGI12635J15846_10154917	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300001593\|JGI12635J15846_10560194	Not Available	668	Open in IMG/M
3300002245\|JGIcombinedJ26739_100208736	All Organisms → cellular organisms → Bacteria → Acidobacteria	1845	Open in IMG/M
3300002245\|JGIcombinedJ26739_101329340	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300002906\|JGI25614J43888_10007604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3508	Open in IMG/M
3300002906\|JGI25614J43888_10013616	Not Available	2620	Open in IMG/M
3300002907\|JGI25613J43889_10002558	All Organisms → cellular organisms → Bacteria	4835	Open in IMG/M
3300002907\|JGI25613J43889_10071087	All Organisms → cellular organisms → Bacteria → Proteobacteria	943	Open in IMG/M
3300002914\|JGI25617J43924_10001777	All Organisms → cellular organisms → Bacteria → Proteobacteria	5755	Open in IMG/M
3300002917\|JGI25616J43925_10181639	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	824	Open in IMG/M
3300004102\|Ga0058888_1397698	Not Available	978	Open in IMG/M
3300004104\|Ga0058891_1480948	Not Available	1232	Open in IMG/M
3300004139\|Ga0058897_10045501	Not Available	617	Open in IMG/M
3300004479\|Ga0062595_101876304	Not Available	573	Open in IMG/M
3300005445\|Ga0070708_100698886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	954	Open in IMG/M
3300005468\|Ga0070707_101471237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300005537\|Ga0070730_10037578	All Organisms → cellular organisms → Bacteria	3593	Open in IMG/M
3300005542\|Ga0070732_10039682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2702	Open in IMG/M
3300005542\|Ga0070732_10454534	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	775	Open in IMG/M
3300006028\|Ga0070717_11127014	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300006041\|Ga0075023_100274752	Not Available	683	Open in IMG/M
3300007258\|Ga0099793_10365588	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300007265\|Ga0099794_10002994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6373	Open in IMG/M
3300007265\|Ga0099794_10173691	All Organisms → cellular organisms → Bacteria → Acidobacteria	1099	Open in IMG/M
3300007265\|Ga0099794_10375340	Not Available	741	Open in IMG/M
3300007265\|Ga0099794_10644128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	563	Open in IMG/M
3300007788\|Ga0099795_10034852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1756	Open in IMG/M
3300009038\|Ga0099829_10077334	Not Available	2537	Open in IMG/M
3300009038\|Ga0099829_11231613	Not Available	619	Open in IMG/M
3300009143\|Ga0099792_10050003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2033	Open in IMG/M
3300010159\|Ga0099796_10078173	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1208	Open in IMG/M
3300010159\|Ga0099796_10215906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300010361\|Ga0126378_12469595	Not Available	593	Open in IMG/M
3300010361\|Ga0126378_13061073	Not Available	532	Open in IMG/M
3300010398\|Ga0126383_12036841	Not Available	661	Open in IMG/M
3300011120\|Ga0150983_11834160	All Organisms → cellular organisms → Bacteria → Acidobacteria	1800	Open in IMG/M
3300011120\|Ga0150983_15338470	Not Available	537	Open in IMG/M
3300011269\|Ga0137392_10587164	Not Available	925	Open in IMG/M
3300011269\|Ga0137392_10732243	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300011269\|Ga0137392_11282739	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300012096\|Ga0137389_10195473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1682	Open in IMG/M
3300012096\|Ga0137389_10853780	All Organisms → cellular organisms → Bacteria → Acidobacteria	781	Open in IMG/M
3300012189\|Ga0137388_10086029	All Organisms → cellular organisms → Bacteria → Acidobacteria	2665	Open in IMG/M
3300012200\|Ga0137382_10408414	Not Available	958	Open in IMG/M
3300012202\|Ga0137363_10646829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300012202\|Ga0137363_11413618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300012202\|Ga0137363_11413796	Not Available	586	Open in IMG/M
3300012203\|Ga0137399_11764312	Not Available	507	Open in IMG/M
3300012205\|Ga0137362_10298785	Not Available	1394	Open in IMG/M
3300012205\|Ga0137362_10351587	Not Available	1276	Open in IMG/M
3300012361\|Ga0137360_10052880	All Organisms → cellular organisms → Bacteria → Acidobacteria	2934	Open in IMG/M
3300012361\|Ga0137360_10477449	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1059	Open in IMG/M
3300012582\|Ga0137358_10365836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	976	Open in IMG/M
3300012582\|Ga0137358_10743614	Not Available	655	Open in IMG/M
3300012582\|Ga0137358_10777518	Not Available	638	Open in IMG/M
3300012582\|Ga0137358_10917301	Not Available	573	Open in IMG/M
3300012683\|Ga0137398_10187583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1359	Open in IMG/M
3300012683\|Ga0137398_10419839	Not Available	912	Open in IMG/M
3300012683\|Ga0137398_10420728	Not Available	911	Open in IMG/M
3300012683\|Ga0137398_10627102	Not Available	745	Open in IMG/M
3300012685\|Ga0137397_10437562	Not Available	974	Open in IMG/M
3300012685\|Ga0137397_10546946	Not Available	862	Open in IMG/M
3300012685\|Ga0137397_11254875	Not Available	530	Open in IMG/M
3300012917\|Ga0137395_10038030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2956	Open in IMG/M
3300012917\|Ga0137395_10610259	Not Available	789	Open in IMG/M
3300012922\|Ga0137394_10690413	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	860	Open in IMG/M
3300012923\|Ga0137359_10300696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1429	Open in IMG/M
3300012923\|Ga0137359_10676229	Not Available	901	Open in IMG/M
3300012923\|Ga0137359_10692795	Not Available	888	Open in IMG/M
3300012923\|Ga0137359_11399737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300012923\|Ga0137359_11494436	Not Available	563	Open in IMG/M
3300012924\|Ga0137413_11340743	Not Available	576	Open in IMG/M
3300012925\|Ga0137419_10213481	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300012927\|Ga0137416_10495283	Not Available	1052	Open in IMG/M
3300012927\|Ga0137416_11683648	Not Available	578	Open in IMG/M
3300012930\|Ga0137407_12362836	Not Available	508	Open in IMG/M
3300015052\|Ga0137411_1211927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3078	Open in IMG/M
3300015054\|Ga0137420_1372517	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	1609	Open in IMG/M
3300015242\|Ga0137412_10332526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1185	Open in IMG/M
3300020579\|Ga0210407_10040481	All Organisms → cellular organisms → Bacteria	3468	Open in IMG/M
3300020580\|Ga0210403_10144441	Not Available	1944	Open in IMG/M
3300020581\|Ga0210399_10677811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300021046\|Ga0215015_10679096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300021088\|Ga0210404_10772709	Not Available	548	Open in IMG/M
3300021168\|Ga0210406_10599041	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300021168\|Ga0210406_11294703	Not Available	525	Open in IMG/M
3300021170\|Ga0210400_10364626	Not Available	1190	Open in IMG/M
3300021170\|Ga0210400_11623443	Not Available	510	Open in IMG/M
3300021171\|Ga0210405_10017795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5810	Open in IMG/M
3300021171\|Ga0210405_10144535	All Organisms → cellular organisms → Bacteria → Acidobacteria	1882	Open in IMG/M
3300021171\|Ga0210405_10749958	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300021178\|Ga0210408_10001633	All Organisms → cellular organisms → Bacteria	23113	Open in IMG/M
3300021178\|Ga0210408_10039014	All Organisms → cellular organisms → Bacteria → Acidobacteria	3735	Open in IMG/M
3300021406\|Ga0210386_11545292	Not Available	552	Open in IMG/M
3300021479\|Ga0210410_11530207	Not Available	560	Open in IMG/M
3300022726\|Ga0242654_10229412	Not Available	657	Open in IMG/M
3300024288\|Ga0179589_10157454	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidipila → unclassified Acidipila → Acidipila sp.	972	Open in IMG/M
3300024330\|Ga0137417_1416014	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4602	Open in IMG/M
3300026304\|Ga0209240_1002957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6417	Open in IMG/M
3300026304\|Ga0209240_1018962	Not Available	2626	Open in IMG/M
3300026319\|Ga0209647_1002257	All Organisms → cellular organisms → Bacteria → Acidobacteria	15650	Open in IMG/M
3300026320\|Ga0209131_1002429	All Organisms → cellular organisms → Bacteria	12639	Open in IMG/M
3300026320\|Ga0209131_1043947	Not Available	2552	Open in IMG/M
3300026551\|Ga0209648_10004261	All Organisms → cellular organisms → Bacteria → Acidobacteria	12127	Open in IMG/M
3300026551\|Ga0209648_10526637	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300026557\|Ga0179587_10115877	All Organisms → cellular organisms → Bacteria	1638	Open in IMG/M
3300027034\|Ga0209730_1005822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1090	Open in IMG/M
3300027512\|Ga0209179_1144375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300027537\|Ga0209419_1007961	Not Available	1732	Open in IMG/M
3300027565\|Ga0209219_1106631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300027591\|Ga0209733_1111606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella	684	Open in IMG/M
3300027610\|Ga0209528_1016358	All Organisms → cellular organisms → Bacteria → Acidobacteria	1622	Open in IMG/M
3300027655\|Ga0209388_1224481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300027660\|Ga0209736_1030071	All Organisms → cellular organisms → Bacteria	1615	Open in IMG/M
3300027660\|Ga0209736_1121458	Not Available	703	Open in IMG/M
3300027671\|Ga0209588_1007418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3225	Open in IMG/M
3300027678\|Ga0209011_1061909	All Organisms → cellular organisms → Bacteria	1126	Open in IMG/M
3300027842\|Ga0209580_10161439	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300027842\|Ga0209580_10186483	Not Available	1027	Open in IMG/M
3300027857\|Ga0209166_10301601	Not Available	843	Open in IMG/M
3300027903\|Ga0209488_10112331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2047	Open in IMG/M
3300027903\|Ga0209488_10208225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1473	Open in IMG/M
3300027910\|Ga0209583_10157071	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300028047\|Ga0209526_10154554	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1605	Open in IMG/M
3300028047\|Ga0209526_10253919	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300028047\|Ga0209526_10480174	Not Available	813	Open in IMG/M
3300028047\|Ga0209526_10930295	Not Available	526	Open in IMG/M
3300028536\|Ga0137415_10012174	All Organisms → cellular organisms → Bacteria → Acidobacteria	8525	Open in IMG/M
3300028536\|Ga0137415_10039437	All Organisms → cellular organisms → Bacteria → Acidobacteria	4622	Open in IMG/M
3300028536\|Ga0137415_10193517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1855	Open in IMG/M
3300028536\|Ga0137415_10378651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1219	Open in IMG/M
3300030935\|Ga0075401_10241949	Not Available	555	Open in IMG/M
3300031231\|Ga0170824_100464545	Not Available	706	Open in IMG/M
3300031718\|Ga0307474_11447300	Not Available	541	Open in IMG/M
3300031720\|Ga0307469_10322324	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300031753\|Ga0307477_10150389	All Organisms → cellular organisms → Bacteria → Acidobacteria	1623	Open in IMG/M
3300031754\|Ga0307475_10724675	Not Available	792	Open in IMG/M
3300031833\|Ga0310917_11005034	Not Available	559	Open in IMG/M
3300031962\|Ga0307479_10224386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Denitrobaculum → Denitrobaculum tricleocarpae	1853	Open in IMG/M
3300031962\|Ga0307479_12060725	Not Available	519	Open in IMG/M
3300032001\|Ga0306922_11249135	Not Available	754	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.59%
Aquatic	Environmental → Aquatic	1.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.59%
Sediment	Environmental → Aquatic → Sediment	1.41%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.99%
Loam	Environmental → Terrestrial → Soil → Loam	17.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.41%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	52.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.41%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.70%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	45.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	15.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.15%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.23%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.23%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.11%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004102	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF212 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027034	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030935	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12637J13337_10128761	3300001137	Forest Soil	MASVQNFLDNLKNFRLVTSVALEHIQENRDQFVRDATGTDVRHFERSISQIRTLAEQLEREFNTLEYLIAKRLPKSVS*
JGI12635J15846_101549171	3300001593	Forest Soil	MANTQNFLDNLKNLGLVTSVALEHVQENRDQFVSEATAVEVRHFERSITQIRMLAERLEREFNTIEYLIAKRFP
JGI12635J15846_105601942	3300001593	Forest Soil	MADAKSFLDNLKNLQLVMSVGLEHIQANSNGFVNDATGKQVRHFEGSITQIRTLAEQMEREFNKLEYLIAKRPRNSV*
JGIcombinedJ26739_1002087362	3300002245	Forest Soil	MADSQNFLDNLKNLRVVLSVALEHTQENRNHFVKHATAIQLRQFERFITQVRILAAQLEKEFNTIEYLTYKRRDN*
JGIcombinedJ26739_1013293401	3300002245	Forest Soil	MASVQNFLDNLKNLRLVTSVALEHVQENRDQFVRDATGMDVRQFETSISQIRPLAEQLEREFNTLEYLISKRLPRSVS*
JGI25614J43888_100076047	3300002906	Grasslands Soil	MIARSAMAEPKSFVDNLKNLRLVMSVALEHMQENRNQFVKSATGNQVRQFERSISQIRTLADQLEKEFNTLEYLIGKRPHTSAS*
JGI25614J43888_100136165	3300002906	Grasslands Soil	MADPKSFLDNLKNLRLVMSVALEHAQENRNQFVKNATGNQVRQLERSISQIRTLAEQLEKEFNTLEYLIDKRPPTSAS*
JGI25613J43889_100025586	3300002907	Grasslands Soil	MADPKSFLDNLKNLRLVMSVALEHIQENRNQFVKNATANQVRQFEKSVSQIRTFADRIGTEFNTLEYLIGKRLT*
JGI25613J43889_100710873	3300002907	Grasslands Soil	MANAKSFLDNLKNLRLVMSVALEHIQENRNQFVKNATESQVRQIEKSISQIRAYADRIETEFNTLEYLIG
JGI25617J43924_100017777	3300002914	Grasslands Soil	MADSKSFLDNLKNLRLVMSVALEHLQENRDHFVKDATASQVRQFEKSVSHIRAFADRIETELNTLEYLISKRR*
JGI25616J43925_101816391	3300002917	Grasslands Soil	MAEPKSFLDNLNNLRLVMSVALEHIQANLTPFVKDASANQLRQCDTSIGQIRTLAEHLEREFNTLDYLIRRRPT*
Ga0058888_13976981	3300004102	Forest Soil	MADAKSFLDNLKNLGLVMSVALEHIQANGNGFVKDATGMQVRHFERSITQIRTLAEQTEREFNKLEYLIAKRPPNSP*
Ga0058891_14809482	3300004104	Forest Soil	MSDSTSFLDNLKNLGLFMSVALEHIQANGDGFVRDATGIQVRHFERSITQIRTLAEQTEREFNKLEYLIAKRPRNSA*
Ga0058897_100455011	3300004139	Forest Soil	MSDSTSFLDNLKNLGLFMSVALEHIQANGDGFVKDATGIEVRHFERSITQIRTLAEQTEREFNKLEYLIAKRPRNSA*
Ga0062595_1018763041	3300004479	Soil	MANAQNFIDNLKNLRLVTSVALEHVQENRDQFVRESTTMEVRNFERSITQIRMLAEQLEREFNTMEYLIGKRFPRSVS*
Ga0070708_1006988861	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MVMSVALEHIQANLTQFTKDATGNQLRQSDRSINQIRTLSEQLEREFHTLEYLVSKRPT*
Ga0070707_1014712371	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MAEPKSFVDNLKNLRMVMSVALEHIQANLTQFTKDATGNQLRQSDRSINQIRTLSEQLEREFHTLEYLVSKRPT*
Ga0070730_100375785	3300005537	Surface Soil	MANVQNFLDNLKNLGLVTSVALEHVQENRDQFVSEATEIQVRHFERSITQIRMLAEQLEREFDTLEYLIGKRFPKSVS*
Ga0070732_100396824	3300005542	Surface Soil	MANAQNFIDNLKNLRLVTSVALEHVQENRNQFVNDATGIQVRQFERAVTQIRTLAEQLEKEFNTLEYLINKRSPKSVC*
Ga0070732_104545342	3300005542	Surface Soil	MANVQNFLDNLKNLGLVTSVALEHVQENRDQFSREATEIQVRHFERSISQIRTLAEQLEREFNTLEYLISKRFPKSVS*
Ga0070717_111270142	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MADPKSFLDNLKNLRLVMSVALEHIQENRNQFVQNATANQVRQFEKSVSQVRTLADRIGTEFNTLEYLIGKRLT*
Ga0075023_1002747521	3300006041	Watersheds	MADRQSFLDNLENLRLVLSGALEHVQANRNQFVKDATGNEVRRFERSITQIRILAERIEREFNTLEYLIAKRRRNFS*
Ga0099793_103655882	3300007258	Vadose Zone Soil	LHSSYPLVAMADSRRFLDNLKNLRLVTSVAIEDVQENRNQFVKDATASEVRQLERFISQIRTLAEQAEKEFNTLEYLLAKRPPASEDSGH*
Ga0099794_1000299411	3300007265	Vadose Zone Soil	MSVALEHMQENRDHFVKDATASQVRQFEKSVSHIRAFADRIETEFNTLEYLIGKRR*
Ga0099794_101736911	3300007265	Vadose Zone Soil	MADSRRFLDNLKNLRLVTSVAIEHVQENRNQFVKDATASEVRQLERFISQIRTLAEQAEKEFNTLEYLLAKRPPASEDSGH*
Ga0099794_103753401	3300007265	Vadose Zone Soil	MTEPKSFVDNLKNLRLVMSVALEHMQENRNKFVKNATGNQVRQAERTLSQIRTFADRIET
Ga0099794_106441281	3300007265	Vadose Zone Soil	MTEPKSFVDNLKNLRLVMSVALEHMQENRNKFVKNATGNQVRQAERTLSQIRTFADRIETESNTLEYLIGKRPT*
Ga0099795_100348522	3300007788	Vadose Zone Soil	MAEPKSFLDNLNNLRLVMSVALEHIQANLTPFVKDASANQLRQCDTSIGQIRTLAEHLEREFNTLDYLIRKRPT*
Ga0099829_100773344	3300009038	Vadose Zone Soil	MTDPKSFLDNLNNLRLVTSVALEHIPANLTRFVMVASANQVRQCETSISQIRTLAEHLEREFHTLEYLIGKRPT*
Ga0099829_112316132	3300009038	Vadose Zone Soil	MANSRRFLDNLKNLRLVTSVAIEHVQENRNQFVKDATASEVRQLERFISQIRTLAEQAEKEFNTLEYLLAKRPPASEDPGH*
Ga0099792_100500034	3300009143	Vadose Zone Soil	MTEPKSFVDNLKNLRLVMSVALEHIQENRNQFVKNATGNQVRQAERTLNQIRTFADRIETESNTLEYLIGKRPA*
Ga0099796_100781733	3300010159	Vadose Zone Soil	MTEPKSFVDNLKNLRLVMSVALEHIQENRNQFVKNATGNQVRQAERTLNQIRTFADRIETESNTLEYLI
Ga0099796_102159062	3300010159	Vadose Zone Soil	MTEPKSFVDNLKNLRLVMSVALEHMQENRNKFVKNATGNQVRQAERTLSQIRTFADRIETESNTLEYLIGKRPA*
Ga0126378_124695951	3300010361	Tropical Forest Soil	MANSRRFLDNLKNLRLVTSVALEHVQENRNQFVNDATASEVRQLERFISQIRTLQEQREREFNTLEYLIAKRSPASEDSSNSGTVTR*
Ga0126378_130610732	3300010361	Tropical Forest Soil	KNLRLVTFVALDHVRENRDQFVKDATGSQVQEFETDISQIRTLAEQLEKEFNTVEDLISKRPPVSGSVKNG*
Ga0126383_120368411	3300010398	Tropical Forest Soil	MADVRSFLDNLKNLRMVTFVALDHVKENRDQFVKDATGSQVQEFEADISQIRTLAEQLEKEFNAVEDLISKHPPVSGSVKNG*
Ga0150983_118341602	3300011120	Forest Soil	MADSKSFLDNLKNLQLVMSVGLEHIQANSNGFVKDATGKQVRHFERSITQIRTLAEQMEREFNRLEYLIAERPRSSV*
Ga0150983_153384701	3300011120	Forest Soil	MSDSTSFLDNLKNLGLFMSVALEHIQANGDGFVKDATGIQVRHFERSITQIRTLAEQTEREFNKLEYLMANRPRNSG*
Ga0137392_105871642	3300011269	Vadose Zone Soil	MAEAKSFLDNLKNLRLVMSVALEHMHANLTPFVNGASANQLRQCDTSIGQIRTLAEHLEREFNTLEYLIGKRPT*
Ga0137392_107322431	3300011269	Vadose Zone Soil	QLDALPVGKSINSSYPLVTMANSRRFLDNLKNLRLVTSVAIEHVQENRNQFVKDATASEVRQLERFISQIRTLAEQAEKEFNTLEYLLAKRPPASADSGH*
Ga0137392_112827392	3300011269	Vadose Zone Soil	MADSRRFLDNLKNLRLVTSVAIEHVQENRNQFVKDATASEARQLERFISQIRTLAEQAEKEFNTLE*
Ga0137389_101954731	3300012096	Vadose Zone Soil	MANSRRFLDNLKNLRLVTSVAIEHVQENRNQFVKDATASEVRQLERFISQIRTLAEQAEKEFNTLEYLLAKRPPASADSGH*
Ga0137389_108537802	3300012096	Vadose Zone Soil	MADSRRFLDNLKNLRLVTSVAIEHVQENRNQFVKDATASEIRQLERFISQIRTLTEPVEKEFNTLEYLIAKRPPASEDS
Ga0137388_100860292	3300012189	Vadose Zone Soil	MADSRRFLDNLKNLRLVTSVAIEHVQENRNQFVKDATASEVRQLERFISQIRTLAEQAEKEFNTLEYLLAKRPPASADSGH*
Ga0137382_104084141	3300012200	Vadose Zone Soil	MTEPNSFVDNLKNLRLVMSVALEHMQENRNQFVKNATGNQVRQAERTLSQIRTFADRIETESNTLEYLIEKRPT*
Ga0137363_106468291	3300012202	Vadose Zone Soil	MQENRDHFVKDATASQVRQFEKSVSHIRTFADRIETEFNTLEYLIGKRR*
Ga0137363_114136182	3300012202	Vadose Zone Soil	MTEPKSFVDNLKNLRLVLSVALEHIQENGNQFVKNATGNQVRQAERTLNQIRTFADRIETESNTLEYLIGKRPA*
Ga0137363_114137962	3300012202	Vadose Zone Soil	NLRLVTSVALEHIQANLTHFVMVASANQVRQCETSISQIRTLAEDLEREFSTLEYLIGKRPT*
Ga0137399_117643122	3300012203	Vadose Zone Soil	FLDNLNNLRLVTSVALEHIQANLTHFVMPASANQLRQCETSVSQIRTLAEHLEREFSTLEYLIGKRPT*
Ga0137362_102987851	3300012205	Vadose Zone Soil	MTDPKSFLDNLNNLRLVTSVALEHIQANLTHFVMVASANQMRQCETSISQIRTLAEDLEREFSTLEYLIGKRPT*
Ga0137362_103515873	3300012205	Vadose Zone Soil	MTEPKSFVDNLKNLRLVLSVALEHIQENRNQFVKNATGNQVRQAERTLNQIRTFADRIETESNTLEYLIGKRPA*
Ga0137360_100528805	3300012361	Vadose Zone Soil	MTDPKSFLDNLNNLRLVTSVALEHIQANLTHFVMVASANQVRQCETSITQIRTLAEDLEREFSTLEYLIGKRPT*
Ga0137360_104774493	3300012361	Vadose Zone Soil	GHVCCFGAQEHMQENRDHFVKDATASQVRQFEKSVSHIRTFADRIETEFNTLEYLIGKRR
Ga0137358_103658362	3300012582	Vadose Zone Soil	MTEPKSFVDNLKNLRLVMSVALEHMQENRNKFVKNATGNQVRQAERTLSQIRTFADRTETESNTLEYLIGKRPT*
Ga0137358_107436141	3300012582	Vadose Zone Soil	AMAEPKSFLDNLNNLRLVMSVALEHIQANLTPFVKDASANQLRQCDTSIGQIRTLAEHLEREFNTLDYLIRRRPT*
Ga0137358_107775181	3300012582	Vadose Zone Soil	MADSRRLLDNLKNLRLVTSVAIEHVQENRNQFVKDATASEVRQLERFISQIRTLAEQAEKEFNTLEYLLAKRPPASEDSGH*
Ga0137358_109173011	3300012582	Vadose Zone Soil	AMAEPKSFLDNLNNLRLVMSVALEHIQANLTPFVKDASANQLRQCDTSISQIRTLAEHLEREFNTLEYLIRKRPT*
Ga0137398_101875833	3300012683	Vadose Zone Soil	MAEPKSFLDNLNNLRLVMSVALEYIQANLTPFVKDASANQLRQCDTSISQIRTLAEHLEREFNTLDYLIRKRPT*
Ga0137398_104198392	3300012683	Vadose Zone Soil	MTDPKSFLDNLNNLRLVTSVALEHIQANLTHFVMVASANQVRQCETSISQIRTLAEDLEREFSTLEYLIGKRPT*
Ga0137398_104207282	3300012683	Vadose Zone Soil	MTDPKSFLDNLNNLRLVTSVALEYIQANLTHFVMVASANQVRQCETSISQIRTLAEHLEREFHTLEYLIGKRPTGH*
Ga0137398_106271021	3300012683	Vadose Zone Soil	MTEPKSFVDNLKNLRLVMSVALEHMQENRNKFVKNATGNQVRQAERTLSQIRTFADRIETESNTL
Ga0137397_104375621	3300012685	Vadose Zone Soil	MTEPKSFVDNLKNLRLVMSVALEHIQENRNQFVKNATGNQVRQAERTLNQVRTFADRIETESNTLEYLIGKRPA*
Ga0137397_105469461	3300012685	Vadose Zone Soil	MTEPKSFVDNLKNLRLVMSVALEHMQENRNKFVKNATGNQVRQAKRTLSQIRTFADRIETESNTLEYLIGKRPA*
Ga0137397_112548751	3300012685	Vadose Zone Soil	SFLDNLNNLRLVMSVALEHIQANLTPFVKDASANQLRQCDTSTSQIRTLAEHLEREFNTLEYLIRKRPT*
Ga0137395_100380306	3300012917	Vadose Zone Soil	MTEPKSFVDNLKNLRLVMSVALEHMQENRNKFVKNATGNQVRQAERTLSQIRTFADRIETESNTLGYLIGKRPA*
Ga0137395_106102592	3300012917	Vadose Zone Soil	MAEAKSFLDNLKNLRLVMSVALEHMHANLTPFVNGASANQLRQCDKSIGQIRTLAEHLERELNTLEYLIGKRTN*
Ga0137394_106904132	3300012922	Vadose Zone Soil	MAEPKSFLDNLNNLRLVMSVALEHIQANLTPFVKDASANQLRQCDMSIGQIRTLAEHLEREFNTLDYLIR
Ga0137359_103006962	3300012923	Vadose Zone Soil	MTEPKSFVDNLKNLRLVMSVALEHIQENRNQFVKNATGNQVRQAERTLSQIRTFADRTETESNTLEYLIGKRPT*
Ga0137359_106762291	3300012923	Vadose Zone Soil	VPRIAMAEPKSFLDNLNNLRLVMSVALEHIQANLTPFVKDASANQLRQCDTSISQIRTLAEHLEREFNTLEYLIRKRPT*
Ga0137359_106927951	3300012923	Vadose Zone Soil	MAEPKSFVDNLKNLRLVMSVALEHMQENRNQFVKSATGNQVRQFERSISQIRTLADQLEKEFNTLEYLIGKRPHTSAS*
Ga0137359_113997371	3300012923	Vadose Zone Soil	LRLVMSVALEHLQENHDHFVKDATASQVRQFEKSVSQIRTFADRIETEFNTLEYLIGKRPPPSN*
Ga0137359_114944362	3300012923	Vadose Zone Soil	MADAQKFLDNLKNLRMVMSVALEHAQENRNQFVKNATNSDVDQFERFVSEIRTLAEQVEREFSALEDLIGKRTRSTGQM*
Ga0137413_113407431	3300012924	Vadose Zone Soil	MAEPKNFVDNLNNLRLVMSVALEHIQVNLTQFTKDATGNQLRQSDRSINQIRTLSEQLEREFKTIEYLIGDRPT*
Ga0137419_102134811	3300012925	Vadose Zone Soil	MAEPKSFLDNLNNLRLVMSVALEHIQANLTPFVKDASANQLRQCDMSIGQIRTLAEHLEREFNTLDYLIRKRPT*
Ga0137416_104952832	3300012927	Vadose Zone Soil	MTDPKSFLDNLNNLRLVTSVALEYIQANLTHFVMVASANQVRQCETSISQIRTLAEDLEREFSTLEYLIGKRPT*
Ga0137416_116836481	3300012927	Vadose Zone Soil	SRIAMGDAESFLDNIKNLQLVMSVSLEHMQENRNRFVKDATGNQVRQIEKSISQIRTFADRMETEFNTIEYLVGKRPPNT*
Ga0137407_123628362	3300012930	Vadose Zone Soil	LDNLNNLRLVTSVALEHIQANLTHFVMVASANQVRQCETSISQIRTLAEDLEREFSTLEYLIGKRPT*
Ga0137411_12119272	3300015052	Vadose Zone Soil	MADPKSFLDNLNNLRLVTSVALEHVQANLTNFVRDASADQVRQCDRSISQIRTLAEQLEREFNTLEYLIGQRAPRSN*
Ga0137420_13725172	3300015054	Vadose Zone Soil	MTEPKSFVDNLKNLRLVMSVALEHMQENRNKFVKNATGNQVRQAERTLSQIRTFADRIETESNTLEYLIGK
Ga0137412_103325261	3300015242	Vadose Zone Soil	VPRIAMAEPKSFLDNLNNLRLVMSVALEHIQANLTPFVKDASANQLRQCDTSIGQIRTLAEHLEREFNTLDYLIRRRPT*
Ga0210407_100404813	3300020579	Soil	MADPKSFLDNLNNLRLVTSVALGHIQANPTHFVKEATGNQVRQCDRSISQIRTLAEQLPREFNTLEYLIGKRIT
Ga0210403_101444411	3300020580	Soil	FLDNLKNLRLVMSVALEHIQENRDQFVKDATASQVRQFEKSVSQIRTFADRIETEFNTLEYLIGKRR
Ga0210399_106778111	3300020581	Soil	SFLDNLKNLRLVMSVAFEHIQANRNRFVKDANGSQVRQFDRTISQIRILAEQIEKEIDTLEYLIAKRPSSIN
Ga0215015_106790961	3300021046	Soil	LKNLRLVMSVALEHMQGNRDQFVKDATPSQVRQFEKSVGQIRTFAGRIETEFNTLEYLIGKRR
Ga0210404_107727092	3300021088	Soil	MSDPTSFLDNLKNLGLFMSVALEHIQANGDGFVRDATGIQVRHFERSITQIRTLAEQTEREFNKLEYLIAKRPRNSA
Ga0210406_105990412	3300021168	Soil	MANAQNFIDNLKNLRLVTSVALEHVQENRDQFSREATEIQVRHFERSITEIRMLAEQLEREFNTLEYLIAKRFPKSVS
Ga0210406_112947031	3300021168	Soil	MICGVLMSDSTSFLDNLKNLGLFMSVALEHIQANGDGFVKDATGIEVLHFERSITQIRTLAEQTEREFNKLEYLMAKRPRNSG
Ga0210400_103646263	3300021170	Soil	MADAQNFLDNLKNLRMVMSVALEHAQENRNQFIKNATMSDLGQFERFVSQIRTLAEQMEGEFSTLEHSIGKRTSN
Ga0210400_116234431	3300021170	Soil	MAEPKSFLDNLKNLRLVMSVALEHIQENHNRFVKNATASQVRQFEKSISEIRTFADRLETEFNTLEYLIGKRPT
Ga0210405_100177954	3300021171	Soil	MADPGSFLDNLKNFRLVLSVALEHIQANRDLFVKDATGNHLRHFERCVSQIRPLAEQMEREFNRLEYLIAKREPR
Ga0210405_101445353	3300021171	Soil	MSDSTSFLDNLKNLGLFMSVALEHIQANGDGFVKDASGIQVRHFERSITQIRTLTEQTEREFNKLEYLIAKRPRNSG
Ga0210405_107499582	3300021171	Soil	VARVERQRIEAGQPLVMADRQSFLDNLKNLHLVLSVALEHVQANRNQFVKNATGNQVRHFERSITQIRVLAGQLEREFNAIEYLIAKPPNSVS
Ga0210408_1000163314	3300021178	Soil	MSDSTSFLDNLKNLGLFMSVALEHIQANGDGFVKDATGIQVRHFERSITQIRTLAEQTEREFNKLEYLMANRPRNSG
Ga0210408_100390142	3300021178	Soil	MAEPGSFLDNLKNLRLVLSVALEHIQANRNEFVNEATGNQVRHFERCISQIRPLAEQMEREFNAIEYLIAKRQAR
Ga0210386_115452921	3300021406	Soil	MAEPGSFLDNLKNLRLVLSVALEHIQANRNEFVNDATENQVRHFERCISQIRPLAEQMEREFNAIEYLLAKRQPR
Ga0210410_115302071	3300021479	Soil	MSDPTSFLDNLKNLGLFMSVALEHIQANGDGFVRDATGIQVRHFERSITQIRTLAEQTEREFNKLE
Ga0242654_102294121	3300022726	Soil	MSDSTSFLDNLKNLGLFMSVALEHIQANGDGFVKDATGIEVLHFERSITQIRTLAEQTEREFNKLEYLMAKRPRNSG
Ga0179589_101574542	3300024288	Vadose Zone Soil	MAEPKSFLDNLNNLRLVMSVALEHIQANLTPFVKDASANQLRQCDMSIGQIRTLAEHLEREFNTLDYLIRKRPT
Ga0137417_14160148	3300024330	Vadose Zone Soil	MPKIRVITFKCPLGEVVPRIAMAEPKSFLDNLNNLRLVMSVALEHIQANLTPFVKDASANQLRQCDTSIGQIRTLAEHLEREFNTLDYLIRKRPT
Ga0209240_10029576	3300026304	Grasslands Soil	MIARSAMAEPKSFVDNLKNLRLVMSVALEHMQENRNQFVKSATGNQVRQFERSISQIRTLADQLEKEFNTLEYLIGKRPHTSAS
Ga0209240_10189623	3300026304	Grasslands Soil	MADPKSFLDNLKNLRLVMSVALEHAQENRNQFVKNATGNQVRQLERSISQIRTLAEQLEKEFNTLEYLIDKRPPTSAS
Ga0209647_10022576	3300026319	Grasslands Soil	MAEPKSFVDNLKNLRLVMSVALEHMQENRNQFVKSATGNQVRQFERSISQIRTLADQLEKEFNTLEYLIGKRPHTSAS
Ga0209131_100242911	3300026320	Grasslands Soil	MADPKSFLDNLKNLRLVMSVALEHIQENRNQFVKNATANQVRQFEKSVSQIRTFADRIGTEFNTLEYLIGKRLT
Ga0209131_10439473	3300026320	Grasslands Soil	MANAKSFLDNLKNLRLVMSVALEHIQENRNQFVKNATESQVRQIEKSISQIRAYADRIETEFNTLEYLIGKRPPPSN
Ga0209648_1000426112	3300026551	Grasslands Soil	MADSKSFLDNLKNLRLVMSVALEHLQENRDHFVKDATASQVRQFEKSVSHIRAFADRIETELNTLEYLISKRR
Ga0209648_105266372	3300026551	Grasslands Soil	KSFVDNLKNLRLVMSVALEHMQENRNKFVKNATGNQVRQAERTLSQIRTFADRIETESNTLEYLIGKRPT
Ga0179587_101158772	3300026557	Vadose Zone Soil	VVPRIAMAEPKSFLDNLNNLRLVMSVALEHIQANLTPFVKDASANQLRQCDMSIGQIRTLAEHLEREFNTLDYLIRKRPT
Ga0209730_10058222	3300027034	Forest Soil	MADARSFLDNLKNLRLVMSVAVEHMQGNRDQFVKDATPSQVRQFEKSVGQIRTFADRIETEFNTLEYLIGKRR
Ga0209179_11443751	3300027512	Vadose Zone Soil	VDNLKNLRLVMSVALEHMQENRNKFVKNATGNQVRQAERTLNQIRTFADRIETESNTLEYLIGKRPA
Ga0209419_10079613	3300027537	Forest Soil	MADGQSFLDNLKNLRLVLSVALEHVQANRNQFVKDATGTQVRHFERSITQIRILAEQLEREFNTLEYLIAKRPHNPVN
Ga0209219_11066311	3300027565	Forest Soil	MSPQMICGVLMADAKSFLDNLKNLQLVMSVGLEHIQANSNGFVNDATGKQVRHFEGSITQIRTLAEQMEREFNKLEYLIAKRPRNSV
Ga0209733_11116061	3300027591	Forest Soil	MANTQNFLDNLKNLGLVTSVALEHVQENRDQFVSEATAVEVRHFERSITQIRMLAERLEREFNTIEYLIAKRFPRSVS
Ga0209528_10163583	3300027610	Forest Soil	MADSQNFLDNLKNLRVVLSVALEHTQENRNHFVKHATAIQLRQFERFITQVRILAAQLEKEFNTIEYLTYKRRDN
Ga0209388_12244812	3300027655	Vadose Zone Soil	SRNAMADPKSFLDNLNNLRLVTSVALEHVQANLTNFVRDASADQVRQCDRSISQIRTLAEQLEREFNTLEYLIGQRAPRSN
Ga0209736_10300712	3300027660	Forest Soil	MASVQNFLDNLKNFRLVTSVALEHIQENRDQFVRDATGTDVRHFERSISQIRTLAEQLEREFNTLEYLIAKRLPKSVS
Ga0209736_11214582	3300027660	Forest Soil	MADAKSFLDNLKNLQLVMSVGLEHIQANSNGFVNDATGKQVRHFEGSITQIRTLAEQMEREFNKLEYLIAKRPRNSV
Ga0209588_10074186	3300027671	Vadose Zone Soil	MSVALEHMQENRDHFVKDATASQVRQFEKSVSHIRAFADRIETEFNTLEYLIGKRR
Ga0209011_10619093	3300027678	Forest Soil	MASVQNFLDNLKNFRLVTSVALEHVQENRDQFVRDATGMDVRQFERSISQIRPLAEQLEREFNTLEYLISKRLPRSVS
Ga0209580_101614392	3300027842	Surface Soil	MANAQNFIDNLKNLRLVTSVALEHVQENRNQFVNDATGIQVRQFERAVTQIRTLAEQLEKEFNTLEYLINKRSPKSVC
Ga0209580_101864833	3300027842	Surface Soil	MANVQNFLDNLKNLGLVTSVALEHVQENRDQFSREATEIQVRHFERSISQIRTLAEQLEREFNTLEYLISKRFPKSVS
Ga0209166_103016012	3300027857	Surface Soil	MANVQNFLDNLKNLGLVTSVALEHVQENRDQFVSEATEIQVRHFERSITQIRMLAEQLEREFDTLEYLIGKRFPKSVS
Ga0209488_101123312	3300027903	Vadose Zone Soil	MTEPKSFVDNLKNLRLVMSVALEHMQENRNKFVKNATGNQVRQAERTLSQIRTFADRIETESNTLEYLIGKRPT
Ga0209488_102082254	3300027903	Vadose Zone Soil	MSVALEHIQENRNQFVKNATGNQVRQAERTLNQIRTFADRIETESNTLEYLIGKRPA
Ga0209583_101570712	3300027910	Watersheds	MANVQNFLDNLKNLRLVTSVALEHVEENRDLFVSEATAMEVRQFERSISQIRTLAERLEREFNTLEYLLAKRLPSQ
Ga0209526_101545542	3300028047	Forest Soil	MSVAVEHIQENCNRFVKNATASQVRQFEKSISQIRTFADRMETEFNTLEYLIGNRLT
Ga0209526_102539193	3300028047	Forest Soil	MADGQSFLDNLKNLRLVLSVALEHVQANRNQFVKDATGNQVRHFERSITQIRILAEQLEREFNTLEYLIAKGPHNPVN
Ga0209526_104801742	3300028047	Forest Soil	MSDSTSFLDNLRNLGLFLSVALEHLQANGNVFVKDATGEQVRHFERSITQIRTLAEQMERQFNRLEYLIAKRPGSSA
Ga0209526_109302951	3300028047	Forest Soil	MICGVLMADAKKFLDNLKNFGLVISVTLEHIQENGDGFVKDATGKQVTHFERSITQIRILAEQ
Ga0137415_1001217412	3300028536	Vadose Zone Soil	MGDAESFLDNIKNLQLVMSVSLEHMQENRNRFVKDATGNQVRQIEKSISQIRTFADRMETEFNTIEYLVGKRPPNT
Ga0137415_100394376	3300028536	Vadose Zone Soil	MTDPKSFLDNLNNLRLVTSVALEYIQANLTHFVMVASANQVRQCETSISQIRTLAEDLEREFSTLEYLIGKRPT
Ga0137415_101935174	3300028536	Vadose Zone Soil	MIARSAMAEPKSFVDNLKNLRLVMSVALEHMQENRNKFVKNATGNQVRQAERTLSQIRTFADRIETESNTLEYLIGKRPT
Ga0137415_103786513	3300028536	Vadose Zone Soil	MADSRRFLDNLKNLRLVTSVAIEHVQENRNQFVKDATASEVRQLERFISQIRTLAEQAEKEFNTLEYLLAKRPPASEDSGH
Ga0075401_102419491	3300030935	Soil	MPEIPVITFSAHQKRWFPIVMADSKTFVDNLKNLRLVMSVALEHIQANLTLCLKDATVNQFRQCDRSVSQIRTLAEQIERELDTLEYLIGKKRPT
Ga0170824_1004645451	3300031231	Forest Soil	MANAQNFIDNLKNLRLVTFVALEHVKDNRDQFSREATEIQVRDFERSITEIRMLAEQLEREFNTLEYLIAKRFPKSVS
Ga0307474_114473001	3300031718	Hardwood Forest Soil	MAEPGRFLDNLKNLQLVLSVALEHIQANRNEFVSDATGNEVRHFERYISQIRTLAEQMEREFNRIEYSIAKRQAR
Ga0307469_103223242	3300031720	Hardwood Forest Soil	MANAQNFIDNLKNLRLVTSVALEHVQENRDQFSREATEIQVRQFERSITEIRMLAEQLEREFNTLEYLIAKRFPKSVS
Ga0307477_101503894	3300031753	Hardwood Forest Soil	MADPGSFLDNLKNFRLVLSVALEHIQANRDLFVKDATGNHLRHFERCVSQIRPLAEQMEREFNKLEYLIAKREPR
Ga0307475_107246752	3300031754	Hardwood Forest Soil	MSDSTSFLDNLKNLGLFMSVALEHIQANGDGFVKDATGIQVRHFERSITQIRTLAEQTEREFNKLEYLMAKRPRNSG
Ga0310917_110050341	3300031833	Soil	MADVRSFLDNLKNLRLVTFVALDHVRENRDQFVKDATGSQVQEFETDISQIRTLAEQLEKEFNTVEDLISKHPPVSGSVKNG
Ga0307479_102243863	3300031962	Hardwood Forest Soil	MVEPGSFLDNLKNLRLVLSVALEHIQANRNEFINEATGNQVRHFERCISQIRTLAEQMEREFNTIEYLIAKRQPR
Ga0307479_120607251	3300031962	Hardwood Forest Soil	MADPKSFLDNLKNLRLVMSVAFEHIQANRNRFVKDANGSQVRQFDRTISQIRILAEQIEKEIDTLEYLIAKRPSSIN
Ga0306922_112491351	3300032001	Soil	MEMVPGGSMADSQRFLDNLKNLRLVTSVALEHVQENRNQFVKDATPSEVRQSERFISQIRTLKEQLEREFNTLEYLIAKRSPASEDSSNSGVTR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052404

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences