Metagenome Family F052510

Basic Information
Family ID	F052510
Family Type	Metagenome
Number of Sequences	142
Average Sequence Length	50 residues
Representative Sequence	LEPAVFLAALLIFVGIPAYTVLKLARLRAARPQSASADVTARLEEVE
Number of Associated Samples	116
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.18 %
% of genes near scaffold ends (potentially truncated)	99.30 %
% of genes from short scaffolds (< 2000 bps)	90.85 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Most Common Taxonomy
Group	Bacteria (86.620 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (32.394 % of family members)
Environment Ontology (ENVO)	Unclassified (48.592 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.225 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 50.67% β-sheet: 0.00% Coil/Unstructured: 49.33%
Feature Viewer

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Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF16694	Cytochrome_P460	16.20
PF07883	Cupin_2	8.45
PF11528	DUF3224	5.63
PF01551	Peptidase_M23	2.82
PF01906	YbjQ_1	2.82
PF03174	CHB_HEX_C	2.11
PF12867	DinB_2	2.11
PF04030	ALO	1.41
PF00903	Glyoxalase	1.41
PF13302	Acetyltransf_3	1.41
PF00069	Pkinase	1.41
PF01139	RtcB	1.41
PF04307	YdjM	1.41
PF13561	adh_short_C2	0.70
PF02472	ExbD	0.70
PF13602	ADH_zinc_N_2	0.70
PF01741	MscL	0.70
PF06983	3-dmu-9_3-mt	0.70
PF12796	Ank_2	0.70
PF13354	Beta-lactamase2	0.70
PF08818	DUF1801	0.70
PF05050	Methyltransf_21	0.70
PF05163	DinB	0.70
PF06271	RDD	0.70
PF04140	ICMT	0.70
PF12098	DUF3574	0.70
PF01638	HxlR	0.70
PF02517	Rce1-like	0.70
PF07676	PD40	0.70
PF08241	Methyltransf_11	0.70
PF13240	zinc_ribbon_2	0.70
PF08734	GYD	0.70
PF07311	Dodecin	0.70
PF03747	ADP_ribosyl_GH	0.70
PF13453	zf-TFIIB	0.70
PF04237	YjbR	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	5.63
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	2.82
COG3525	N-acetyl-beta-hexosaminidase	Carbohydrate transport and metabolism [G]	2.11
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	1.41
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	1.41
COG1988	Membrane-bound metal-dependent hydrolase YbcI, DUF457 family	General function prediction only [R]	1.41
COG0848	Biopolymer transport protein ExbD	Intracellular trafficking, secretion, and vesicular transport [U]	0.70
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.70
COG1397	ADP-ribosylglycohydrolase	Posttranslational modification, protein turnover, chaperones [O]	0.70
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.70
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.70
COG1970	Large-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.70
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	0.70
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.70
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.70
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.70
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.70
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.70
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.70
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.70
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.70
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.62 %
Unclassified	root	N/A	13.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.62 %
Unclassified	root	N/A	13.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.62 %
Unclassified	root	N/A	13.38 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	24.65 %
Unclassified	root	N/A	13.38 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.23 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	24.65 %
Unclassified	root	N/A	13.38 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.82 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	2.82 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.11 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.70 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.70 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.70 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.70 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	16.20 %
Unclassified	root	N/A	13.38 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.82 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	2.11 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	2.11 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.11 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.70 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.70 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	14.79 %
Unclassified	root	N/A	13.38 %
Microbulbiferaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Microbulbiferaceae	2.11 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	2.11 %
Gemmatimonadetes bacterium 13_1_40CM_66_11	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_66_11	1.41 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	1.41 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.41 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.70 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.70 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	14.79 %
Unclassified	root	N/A	13.38 %
Microbulbifer	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Microbulbiferaceae → Microbulbifer	2.11 %
unclassified Myxococcales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales	1.41 %
Chroococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales	1.41 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1.41 %
Gemmatimonadetes bacterium 13_1_40CM_66_11	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_66_11	1.41 %
Prochlorococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae	0.70 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	0.70 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.70 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	14.79 %
Unclassified	root	N/A	13.38 %
Microbulbifer mangrovi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Microbulbiferaceae → Microbulbifer → Microbulbifer mangrovi	2.11 %
Microcystaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae	1.41 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1.41 %
Gemmatimonadetes bacterium 13_1_40CM_66_11	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_66_11	1.41 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.70 %
Methyloceanibacter methanicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	0.70 %
Acrocarpospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora	0.70 %
Cyanobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium	0.70 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	0.70 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	14.79 %
Unclassified	root	N/A	13.38 %
Microbulbifer mangrovi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Microbulbiferaceae → Microbulbifer → Microbulbifer mangrovi	2.11 %
Microcystis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis	1.41 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1.41 %
Gemmatimonadetes bacterium 13_1_40CM_66_11	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_66_11	1.41 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.70 %
unclassified Cyanobium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium → unclassified Cyanobium	0.70 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.70 %
Acrocarpospora corrugata	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora → Acrocarpospora corrugata	0.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.70 %
Methyloceanibacter methanicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	14.79 %
Unclassified	root	N/A	13.38 %
Microbulbifer mangrovi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Microbulbiferaceae → Microbulbifer → Microbulbifer mangrovi	2.11 %
Microcystis elabens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis elabens	1.41 %
Myxococcales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1.41 %
Gemmatimonadetes bacterium 13_1_40CM_66_11	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_66_11	1.41 %
Cyanobium sp. A2C-AMD	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium → unclassified Cyanobium → Cyanobium sp. A2C-AMD	0.70 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.70 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.70 %
Acrocarpospora corrugata	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora → Acrocarpospora corrugata	0.70 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	0.70 %
Methyloceanibacter methanicus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	0.70 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.70 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.70 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002562\|JGI25382J37095_10045021	All Organisms → cellular organisms → Bacteria → Proteobacteria	1711	Open in IMG/M
3300002911\|JGI25390J43892_10140367	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300002916\|JGI25389J43894_1019517	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1175	Open in IMG/M
3300005167\|Ga0066672_10284087	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	1072	Open in IMG/M
3300005171\|Ga0066677_10002303	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7116	Open in IMG/M
3300005176\|Ga0066679_10832533	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300005176\|Ga0066679_11035058	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300005186\|Ga0066676_10590321	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	753	Open in IMG/M
3300005186\|Ga0066676_10725370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Microbulbiferaceae → Microbulbifer → Microbulbifer mangrovi	676	Open in IMG/M
3300005187\|Ga0066675_10602061	Not Available	826	Open in IMG/M
3300005451\|Ga0066681_10181780	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300005468\|Ga0070707_100165708	All Organisms → cellular organisms → Bacteria	2154	Open in IMG/M
3300005468\|Ga0070707_100398494	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1336	Open in IMG/M
3300005518\|Ga0070699_101951253	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	537	Open in IMG/M
3300005540\|Ga0066697_10046881	All Organisms → cellular organisms → Bacteria	2440	Open in IMG/M
3300005546\|Ga0070696_100190704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter methanicus	1525	Open in IMG/M
3300005553\|Ga0066695_10171573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis elabens	1355	Open in IMG/M
3300005556\|Ga0066707_10669167	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300005558\|Ga0066698_10692073	Not Available	674	Open in IMG/M
3300005560\|Ga0066670_10352440	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300005576\|Ga0066708_10014687	All Organisms → cellular organisms → Bacteria	3830	Open in IMG/M
3300005586\|Ga0066691_10865918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium → unclassified Cyanobium → Cyanobium sp. A2C-AMD	532	Open in IMG/M
3300006034\|Ga0066656_10075589	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2001	Open in IMG/M
3300006791\|Ga0066653_10634123	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	545	Open in IMG/M
3300006797\|Ga0066659_11833834	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300006845\|Ga0075421_100886194	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300006853\|Ga0075420_101655324	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	548	Open in IMG/M
3300006914\|Ga0075436_100368215	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300006954\|Ga0079219_10309816	All Organisms → cellular organisms → Bacteria → Proteobacteria	985	Open in IMG/M
3300007076\|Ga0075435_100197042	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1706	Open in IMG/M
3300007255\|Ga0099791_10547324	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	564	Open in IMG/M
3300007258\|Ga0099793_10033246	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2204	Open in IMG/M
3300007258\|Ga0099793_10147740	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300007258\|Ga0099793_10617251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	544	Open in IMG/M
3300007265\|Ga0099794_10179012	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300007265\|Ga0099794_10445618	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	679	Open in IMG/M
3300009012\|Ga0066710_102704364	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300009038\|Ga0099829_10051254	All Organisms → cellular organisms → Bacteria → Proteobacteria	3059	Open in IMG/M
3300009089\|Ga0099828_10662727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	938	Open in IMG/M
3300009090\|Ga0099827_10365948	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1228	Open in IMG/M
3300009094\|Ga0111539_10490458	All Organisms → cellular organisms → Bacteria	1431	Open in IMG/M
3300009137\|Ga0066709_102111168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Microbulbiferaceae → Microbulbifer → Microbulbifer mangrovi	778	Open in IMG/M
3300009137\|Ga0066709_102739196	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300009137\|Ga0066709_103206331	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300009137\|Ga0066709_104110793	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300009143\|Ga0099792_10934626	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300010301\|Ga0134070_10468609	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300010303\|Ga0134082_10013769	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2935	Open in IMG/M
3300010322\|Ga0134084_10447531	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	513	Open in IMG/M
3300010323\|Ga0134086_10401912	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300010323\|Ga0134086_10407615	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300010329\|Ga0134111_10233996	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300010329\|Ga0134111_10254933	Not Available	721	Open in IMG/M
3300010335\|Ga0134063_10154188	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300010364\|Ga0134066_10211157	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300010399\|Ga0134127_13572834	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	510	Open in IMG/M
3300010400\|Ga0134122_12414457	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	573	Open in IMG/M
3300010401\|Ga0134121_11373590	Not Available	715	Open in IMG/M
3300011269\|Ga0137392_10830657	Not Available	762	Open in IMG/M
3300012189\|Ga0137388_10022140	All Organisms → cellular organisms → Bacteria → Proteobacteria	4802	Open in IMG/M
3300012189\|Ga0137388_10202821	All Organisms → cellular organisms → Bacteria	1788	Open in IMG/M
3300012198\|Ga0137364_10485776	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300012198\|Ga0137364_11221747	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300012199\|Ga0137383_11268396	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	527	Open in IMG/M
3300012200\|Ga0137382_10518412	Not Available	848	Open in IMG/M
3300012203\|Ga0137399_10646573	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300012203\|Ga0137399_10707405	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300012203\|Ga0137399_11647824	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	530	Open in IMG/M
3300012204\|Ga0137374_10801155	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	699	Open in IMG/M
3300012205\|Ga0137362_11263888	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	623	Open in IMG/M
3300012206\|Ga0137380_10366294	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300012207\|Ga0137381_11120067	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300012207\|Ga0137381_11524019	Not Available	560	Open in IMG/M
3300012208\|Ga0137376_11143172	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300012209\|Ga0137379_11794241	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	508	Open in IMG/M
3300012211\|Ga0137377_10201006	All Organisms → cellular organisms → Bacteria	1914	Open in IMG/M
3300012211\|Ga0137377_11134533	All Organisms → cellular organisms → Bacteria	712	Open in IMG/M
3300012285\|Ga0137370_10343152	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300012285\|Ga0137370_10557113	Not Available	705	Open in IMG/M
3300012285\|Ga0137370_10925370	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300012349\|Ga0137387_10326148	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300012353\|Ga0137367_10294176	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300012353\|Ga0137367_10908269	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	606	Open in IMG/M
3300012359\|Ga0137385_10356490	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300012359\|Ga0137385_11370195	Not Available	570	Open in IMG/M
3300012360\|Ga0137375_10256687	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1610	Open in IMG/M
3300012361\|Ga0137360_10258196	Not Available	1433	Open in IMG/M
3300012362\|Ga0137361_10635802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Chroococcales → Microcystaceae → Microcystis → Microcystis elabens	977	Open in IMG/M
3300012363\|Ga0137390_10010701	All Organisms → cellular organisms → Bacteria	8109	Open in IMG/M
3300012917\|Ga0137395_10657702	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300012918\|Ga0137396_10462756	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	940	Open in IMG/M
3300012927\|Ga0137416_12108828	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300012929\|Ga0137404_11564605	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	611	Open in IMG/M
3300012972\|Ga0134077_10441823	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300012977\|Ga0134087_10636427	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300014154\|Ga0134075_10547415	Not Available	522	Open in IMG/M
3300014166\|Ga0134079_10395250	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	641	Open in IMG/M
3300015356\|Ga0134073_10022896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1514	Open in IMG/M
3300017654\|Ga0134069_1302071	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300017656\|Ga0134112_10060057	All Organisms → cellular organisms → Bacteria → Proteobacteria	1390	Open in IMG/M
3300017656\|Ga0134112_10472893	Not Available	527	Open in IMG/M
3300017657\|Ga0134074_1080716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora → Acrocarpospora corrugata	1110	Open in IMG/M
3300017659\|Ga0134083_10304260	Not Available	677	Open in IMG/M
3300017659\|Ga0134083_10352638	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300017997\|Ga0184610_1315263	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	513	Open in IMG/M
3300018070\|Ga0184631_10050048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1525	Open in IMG/M
3300018073\|Ga0184624_10392605	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300018431\|Ga0066655_10732871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Microbulbiferaceae → Microbulbifer → Microbulbifer mangrovi	670	Open in IMG/M
3300018433\|Ga0066667_10427437	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1077	Open in IMG/M
3300018433\|Ga0066667_10652270	All Organisms → cellular organisms → Bacteria → Proteobacteria	880	Open in IMG/M
3300020003\|Ga0193739_1138008	Not Available	593	Open in IMG/M
3300021088\|Ga0210404_10563698	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	646	Open in IMG/M
3300025318\|Ga0209519_10340251	Not Available	865	Open in IMG/M
3300026296\|Ga0209235_1227110	Not Available	597	Open in IMG/M
3300026298\|Ga0209236_1145344	All Organisms → cellular organisms → Bacteria	1011	Open in IMG/M
3300026300\|Ga0209027_1081436	All Organisms → cellular organisms → Bacteria	1190	Open in IMG/M
3300026310\|Ga0209239_1152386	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300026313\|Ga0209761_1148808	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_66_11	1106	Open in IMG/M
3300026314\|Ga0209268_1113154	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300026325\|Ga0209152_10162842	Not Available	841	Open in IMG/M
3300026328\|Ga0209802_1206725	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300026331\|Ga0209267_1017586	All Organisms → cellular organisms → Bacteria	3660	Open in IMG/M
3300026331\|Ga0209267_1144275	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300026332\|Ga0209803_1286562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300026334\|Ga0209377_1338472	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300026343\|Ga0209159_1137850	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300026524\|Ga0209690_1302745	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300026528\|Ga0209378_1150326	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300026530\|Ga0209807_1150926	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	887	Open in IMG/M
3300026536\|Ga0209058_1279694	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_1_40CM_66_11	575	Open in IMG/M
3300026538\|Ga0209056_10366652	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → unclassified Myxococcales → Myxococcales bacterium	928	Open in IMG/M
3300026538\|Ga0209056_10470827	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300026540\|Ga0209376_1039217	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2848	Open in IMG/M
3300027169\|Ga0209897_1053024	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300027748\|Ga0209689_1247602	Not Available	734	Open in IMG/M
3300027875\|Ga0209283_10987937	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300027886\|Ga0209486_10031653	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	2552	Open in IMG/M
3300028884\|Ga0307308_10507717	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300031720\|Ga0307469_11350774	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300031820\|Ga0307473_11287087	Not Available	547	Open in IMG/M
3300033501\|Ga0326732_1050191	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	689	Open in IMG/M
3300034773\|Ga0364936_108698	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.48%
Host-Associated	Host-Associated	3.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.37%
Plants	Host-Associated → Plants	3.52%
Aquatic	Environmental → Aquatic	2.11%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.52%
Sediment	Environmental → Aquatic → Sediment	2.11%
Peat	Environmental → Terrestrial → Peat	0.70%
Floodplain	Environmental → Terrestrial → Floodplain	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.73%
Loam	Environmental → Terrestrial → Soil → Loam	3.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.52%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.11%
Sand	Environmental → Terrestrial → Soil → Sand	0.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.70%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.11%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.11%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.41%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.70%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.70%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.70%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	32.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.24%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	14.08%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.27%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.82%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.11%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.41%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.70%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.70%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.70%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027169	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300033501	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF12FN SIP fraction	Environmental	Open in IMG/M
3300034773	Sediment microbial communities from East River floodplain, Colorado, United States - 4_s17	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F052510

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J37095_100450213	3300002562	Grasslands Soil	MEPPVFLAALLIFVGIPALTVLKIARLRATRPQSPSADVTE
JGI25390J43892_101403672	3300002911	Grasslands Soil	LEPAVFLTALLIFVGIPAYTVLKLARLRAARPQSASADVTA
JGI25389J43894_10195171	3300002916	Grasslands Soil	MEPGVFLAALLIFVGIPAFTVLKIARLRATRLQSPSAEVTERLEAVEHRVEALQQELA
Ga0066672_102840872	3300005167	Soil	LDSAVFLVALLIFMGIPAFTVLRVARLRAARPQSPSADVTARLEAVE
Ga0066677_100023031	3300005171	Soil	LDSAVFLVALLIFMGIPAFTVLRVARLRAARPQSPSADVTARLEAVEHVVQDLQ
Ga0066679_108325332	3300005176	Soil	LEPAVFLTALLIFVGIPAYTVLKLARLRAARPQSASADVTARLEEVERGV
Ga0066679_110350582	3300005176	Soil	LEPAVFLAALLIFVGIPAYTVLKLARLRAARPQSASADVTARLEEVERGV
Ga0066676_105903211	3300005186	Soil	MEPPVFLAALLIFVGIPALTVLKIARLRASRPQSPSADVTER
Ga0066676_107253701	3300005186	Soil	LEPVVFLTALLILVGIPAVTVLKLARLRAARPQTPSADVTARLEEVERGVQDLRHE
Ga0066675_106020613	3300005187	Soil	VVNQEEGYMEPPVFLAALLIFVGIPAFTVIKVARLRAARTQSPSV
Ga0066681_101817801	3300005451	Soil	MEPGVFLAALLIFIGIPAFTVLKIARLRAARPQSPSADVTERLEAVEHRVEDLQ
Ga0070707_1001657086	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEPGVFLAALLIFVGIPAFTVLKIARLRAARPQSAAADVAERLEAVEQRVE
Ga0070707_1003984941	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LDPIVFLAALLIFVGIPAFTVIKLARLRAARSQSPSADVTARLEAVE
Ga0070699_1019512531	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MEPSVFLAALLIFVGIPAFTVLRIAKLRAARSQPSEDTTARLEALENRVQ
Ga0066697_100468811	3300005540	Soil	MEPGVFLAALLIFVGIPAYTVIRIARLRAARLQSPSADV
Ga0070696_1001907041	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MQPPVFLAALLILFGIPAITVITVARLRAKRPGALPEDVTSRLEALEGGLQDVQKELAETQERLD
Ga0066695_101715734	3300005553	Soil	LDSTVFLVALLIFVGIPAVTVLKVARLRAARPQSPSADVIARLEAVERVVQDLQQQLAE
Ga0066707_106691671	3300005556	Soil	LEPAVFLAALLIFVGIPAYTVLKLARLRAARPQSASADVTARLEEVE
Ga0066698_106920732	3300005558	Soil	MEPPVFLAALLILIGVPAFTVLKIARLRAARPQSPPADVTERLEAVEHR
Ga0066670_103524401	3300005560	Soil	MEPGVFLAALLIFVGIPAFTVLKIARLRATRLQSPSAEVTERLEAVEHRV
Ga0066708_100146871	3300005576	Soil	LDSAVFLVALLIFMGIPAFTVLRVARLRAARPQSPSADVTARLEAVEHVVQDLQQQLA
Ga0066691_108659182	3300005586	Soil	LQPAVFLAALLILVGIPAVTVITLARLRAARSQSPPADVTARLEAVERGV
Ga0066656_100755891	3300006034	Soil	MEPAVFLAALLIFLGIPAIAVITIARLRANRPQSPSADMTARLEAVENGLQDLQQELAAT
Ga0066653_106341232	3300006791	Soil	MEPGVFLAALLIFIGIPAFTVLKIARLRAARPQSPSADVTERL
Ga0066659_118338342	3300006797	Soil	MEPAVFLAALLIFVGIPAFTVLRIARLRAARGQPSEDTTARLEELE
Ga0075421_1008861941	3300006845	Populus Rhizosphere	MEPGVFLAALLIFVGIPAFTVLRIARLRAERRDLP
Ga0075420_1016553242	3300006853	Populus Rhizosphere	MDPVVFLIALCIVVGIPAFTVIKIARLRAARLGSPA
Ga0075436_1003682153	3300006914	Populus Rhizosphere	MEPPVFLAALLIFFGIPALTVITVARLRAKRSESLPPDVTARLEALEGGLQDV
Ga0079219_103098161	3300006954	Agricultural Soil	LEPVVFLAALLIFVGIPAVTVLKLARLRAARPQSPSADVTARLEEVERGVQDLRQELAETQERL
Ga0075435_1001970421	3300007076	Populus Rhizosphere	VEPLVFLTALLIFVGIPAVTVLKLARLRAARPQSPSPDVTARLEEVERSMQDLRQELAET
Ga0099791_105473241	3300007255	Vadose Zone Soil	MEPSVFLAALLIFVGIPAFTVLRIARLRAARGQPSEDTTARLEELENRVQELEQTQAEVQER
Ga0099793_100332461	3300007258	Vadose Zone Soil	MEPGVFLAALLIFVGIPAFTVIKVARLRAARRESPSADVTARLEAVERG
Ga0099793_101477403	3300007258	Vadose Zone Soil	MDPPVFLAALLIFVGIPALTVLKLARLRASRPQSAAADVTERL
Ga0099793_106172512	3300007258	Vadose Zone Soil	MEPGVFLAALLIFVGIPAFTVLRIARLRAARPQSLPAD
Ga0099794_101790122	3300007265	Vadose Zone Soil	VFLAALSIFVGIPAFAVIKVARIRATRTTPPSPDVAARLEALERSVQNLQHELGETQ
Ga0099794_104456182	3300007265	Vadose Zone Soil	MQPAVFLAALLIFMGIPAIAVITIARLRANRPQSPSA
Ga0066710_1027043641	3300009012	Grasslands Soil	LEPAVFLTALLILVGIPAVTVLKLARLRAARPQSASADVTARLEEVERGVQDLRHELAETQE
Ga0099829_100512541	3300009038	Vadose Zone Soil	LEPAVFLAALLIFVGIPAYTVLKLARLRAARPQSPSADVTARLEEMERGVQDLRHE
Ga0099828_106627272	3300009089	Vadose Zone Soil	VDPAVFLVALLIFVGIPAITVIKLARLRASRPQSPSADVTARLEAVERGV
Ga0099827_103659482	3300009090	Vadose Zone Soil	MEPGVFLAALLIFVGIPAFTVIKVARLRAARRESPSVDVTARLEAVERGVQDLQHEL
Ga0111539_104904581	3300009094	Populus Rhizosphere	MEPPVFLAALLIFVGIPALTILKIARLRANRPQSPSPEVTE
Ga0066709_1021111681	3300009137	Grasslands Soil	LEPVVFLTALLILVGIPAVTVLKLARLRAARPQSASADVTARLEEVE
Ga0066709_1027391962	3300009137	Grasslands Soil	MEPSVFLAALLIFVGIPALTVIKLARLRAARPQSPSDELIARLEAVEGRVQDLQQELVETQE
Ga0066709_1032063312	3300009137	Grasslands Soil	MEPAVFLAALLIFVGIPALTVIKLARLRAARPHALSDDVTARLEELESRLQDLQREQAET
Ga0066709_1041107931	3300009137	Grasslands Soil	MEPGVFLAALLIFVGIPSLTILKIARLRANRPQASADVTER
Ga0099792_109346262	3300009143	Vadose Zone Soil	LEPVVFLAALLIFVGIPAVTVLKLARLRAARPQSPSADVTARLEE
Ga0134070_104686092	3300010301	Grasslands Soil	LEPAVFLAALLIFVGIPAYTVLKLARLRAARPQSASADVTARLEEVERGVQDLRHELA
Ga0134082_100137691	3300010303	Grasslands Soil	LEPEVFLAALLIFVGIPAFTVIKLARLRAARPQSLPADVTARLEGL
Ga0134084_104475312	3300010322	Grasslands Soil	MEPAVFLVALLIFVGIPAFTVIRVARLRAARTESPSADVTARLEALERSFQDLQQELG
Ga0134086_104019122	3300010323	Grasslands Soil	MEPAVFLAALLIFVGIPAFTVIKVARLRATRPEALSAEVAARLEALE
Ga0134086_104076152	3300010323	Grasslands Soil	LEPAVFLAALLIFVGIPAYTVLKLARLRAARPQSASADVTARLEEVERGVQ
Ga0134111_102339961	3300010329	Grasslands Soil	MEPGVFLAALLIFVGIPSLTILKIARLRANRSQASG
Ga0134111_102549331	3300010329	Grasslands Soil	VEPAVFLTALLILVGIPAVTVLKLARLRAARPQSGSADVT
Ga0134063_101541883	3300010335	Grasslands Soil	LEPAVFLAALLIFVGIPAYTVLKLARLRAARPQSASADVTARLEEVERGVQDLRHE
Ga0134066_102111571	3300010364	Grasslands Soil	MEPAVFLAAFVIVLGIPRITVLKIARMRGARLQSASADVTE
Ga0134127_135728341	3300010399	Terrestrial Soil	MEPGVFLAALLIFVGIPSLTILRIARLRASRPQAPPADVTERLEAVEHRVEDLQQELAET
Ga0134122_124144571	3300010400	Terrestrial Soil	MEPSVFLAALLIFVGIPAFTVLRIAKLRAARSQPSEDTTARLE
Ga0134121_113735902	3300010401	Terrestrial Soil	MDPAVFIAALLILLGVPAFTVIKLARLRANRLQSPSADVAARL
Ga0137392_108306572	3300011269	Vadose Zone Soil	MEPAVFLAALLIFVGIPAFAVIKVARIRAARTTSPSPDVTARLEA
Ga0137388_100221408	3300012189	Vadose Zone Soil	MEPAVFLAALLIFVGIPAFAVIKVARIRAARTTSPSPDVTARLEALERSVQDLQ
Ga0137388_102028215	3300012189	Vadose Zone Soil	MEPGVFLAALLIFVGIPALTVIKLARLRAARPQALSDDVTARLEALES
Ga0137364_104857761	3300012198	Vadose Zone Soil	LEPAVFLTALLIFVGIPAYTVLKLARLRAARPQSASADVTARLEEVER
Ga0137364_112217471	3300012198	Vadose Zone Soil	LEPAVFLTALLILVGIPAVTVLKLARLRAARPQSASADVTARLEEVERGVQDL
Ga0137383_112683962	3300012199	Vadose Zone Soil	MEPGVFLAALLIFVGIPAFTVLKIARLRATRIQSPSAEVTERLEAVEHRVEALQQELAE
Ga0137382_105184121	3300012200	Vadose Zone Soil	MEPPVFLAALLILIGVPAFTVLKIARLRAARPQSPP
Ga0137399_106465733	3300012203	Vadose Zone Soil	MEPGVFLAALLIFVGIPALTVIKVARLRANRTQSPSADVTARLEALERSVQELQREQ
Ga0137399_107074051	3300012203	Vadose Zone Soil	MEPSVFLAALLIFVGIPALTVLKIARLRASRPQSP
Ga0137399_116478242	3300012203	Vadose Zone Soil	MEPAVFLAALVIFMGIPAFAVIKIARLRASRPESVSSDFTERLEVLEGRVQDLQQEQAE
Ga0137374_108011551	3300012204	Vadose Zone Soil	MEPGVFLAALLIFIGIPAFTVLRIARLRAARPQSPSADVTE
Ga0137362_112638882	3300012205	Vadose Zone Soil	MEPAVFLAALVIFMGIPAFAVIKIARLRAARPESVSSDFTERLEALESRVQDLQ
Ga0137380_103662941	3300012206	Vadose Zone Soil	MDPAVFLAALLILIGIPALAVIKVVRLRATRPQSPSADVTARLEALESGLQDLQQELAAAQE
Ga0137381_111200671	3300012207	Vadose Zone Soil	MEPPVFLAALLIFVGIPAFTVLKIARLRAARPQSPSPEV
Ga0137381_115240193	3300012207	Vadose Zone Soil	VEPAVFLTALLILVGIPAVTVLKLARLRAARPQSASADVTARL
Ga0137376_111431721	3300012208	Vadose Zone Soil	VFLTALLILVGIPAVTVLKLARLRAARPQSASADVTARLEEV
Ga0137379_117942411	3300012209	Vadose Zone Soil	MEPAVFLAALLIFVGIPSLTILKIARLRANRPQASGDVTERLEAVEH
Ga0137377_102010064	3300012211	Vadose Zone Soil	LEPAVFLTALLILVGIPAVTVLKLARLRAARPQSASADVTARLEEVERGVQDLRHE
Ga0137377_111345332	3300012211	Vadose Zone Soil	MEPAVFLAALLIFVGIPALTVIKLARLRAARPHALSDDVTARLEELESRLQDLQREQAE
Ga0137370_103431521	3300012285	Vadose Zone Soil	LEPAVFLTALLIFVGIPAYTVLKLARLRAARPQSASADVTARLEE
Ga0137370_105571131	3300012285	Vadose Zone Soil	MEPPVFLAALLIFVGIPAFTVLKIARLRAARSQSPSAEVTERLEAVEQRVEDLQQELAE
Ga0137370_109253702	3300012285	Vadose Zone Soil	LDPAVFLAALLIFVGIPAYTVLKLARLRAARPQSASADVTARLEEVERGVQDL
Ga0137387_103261484	3300012349	Vadose Zone Soil	LEPAVFLTALLILVGIPAVTVLKLARLRAARPQSASADVTARLEEVERGVQDLRH
Ga0137367_102941761	3300012353	Vadose Zone Soil	MEPGVFLAALLIFVGIPALTVIKLARLRAARREAPSADVTARLEAVERSVQDVQQELAETQER
Ga0137367_109082691	3300012353	Vadose Zone Soil	MEPAVFLAALLIFVGIPALTVLKIARLRATRPQSPSADVAERLEAVEHRVEDLQQELAETQERL
Ga0137385_103564903	3300012359	Vadose Zone Soil	MEPAVFLAALLIFVGIPSLTILKIARLRANRPQASGDVTERLEAVE
Ga0137385_113701953	3300012359	Vadose Zone Soil	LEPAVFLTALLILVGIPAVTVLKLARLRAARPQSASADVTARLEEV
Ga0137375_102566871	3300012360	Vadose Zone Soil	MEPGVFLATLLIFVGIPALTVFKIARLRATRLQSPS
Ga0137360_102581961	3300012361	Vadose Zone Soil	LEPAVFLAALLIFVGIPAYTVLKLARLRAARPQSASADVTARLEEVERGVQDLRH
Ga0137361_106358021	3300012362	Vadose Zone Soil	MEPAVFLAALLIFVGIPALTVIKLARLRAARPHALSDDVTARLEELESRLQD
Ga0137390_100107011	3300012363	Vadose Zone Soil	MEPAVFLAALLIFVGIPAFAVIKVARIRAARTTSPSPDV
Ga0137395_106577022	3300012917	Vadose Zone Soil	MEPAVFLAALSIFVGIPAFAVIKVARIRAARTTSPSPDVTARLEALERSVQDLQHELGET
Ga0137396_104627562	3300012918	Vadose Zone Soil	MEPAVFLAALVIFMGIPAFAVIKIARLRAARPESVSSDFTERLEALESRVQDLQQEQ
Ga0137416_121088282	3300012927	Vadose Zone Soil	MEPSVFLAALLIFVGIPAFTVLRLARLRAARPQSLPADTAERLE
Ga0137404_115646051	3300012929	Vadose Zone Soil	MEPGVFLAALLIFVGIPAFTVIKVARLRAARRESPSADVTAR
Ga0134077_104418231	3300012972	Grasslands Soil	MEPGVFLAALLIFVGIPAYTVIRIARLRAARLQSPSADVTERLEAVEHRVE
Ga0134087_106364272	3300012977	Grasslands Soil	LEPVVFLTALLILVGIPAVTVLKLARLRAARPQSASADVTARLEEVERGVQ
Ga0134075_105474151	3300014154	Grasslands Soil	LEPAVFLTALLILVGIPAVTVLKLARLRAARPQSGSADVTARLEEVERGVQDLRHE
Ga0134079_103952502	3300014166	Grasslands Soil	LEPGVFLAALLIFVGIPAITVIKLARLRAARPQSLPADVTARLEGL
Ga0134073_100228964	3300015356	Grasslands Soil	LDSTVFLVALLIFVGIPAVTVLKVARLRAARPQSPSADVIARLEAVERVVQDLQQQLA
Ga0134069_13020711	3300017654	Grasslands Soil	LDSAVFLVALLIFMGIPAFTVLRVARLRAARPQSPSADV
Ga0134112_100600573	3300017656	Grasslands Soil	LEPAVFLTALLILVGIPAVTVLKLARLRAARPLAPSADVTARLEEVERGVQDLR
Ga0134112_104728932	3300017656	Grasslands Soil	MEPGVFLAALLILVGIPALTVFRIARLRATRLQSPSADVTERLEAVEHRVEDLQQELAETQE
Ga0134074_10807161	3300017657	Grasslands Soil	LEPAVFLTALLILVGIPAVTVLKLARLRAARPQSGSADVTA
Ga0134083_103042602	3300017659	Grasslands Soil	LEPVVFLTALLILVGIPAFTVLKLARRRAARPQSASADVTARLEEVERGVQDLRHE
Ga0134083_103526381	3300017659	Grasslands Soil	LEPAVFLTALLILVGIPAVTVLKLARLRAARPQSA
Ga0184610_13152632	3300017997	Groundwater Sediment	MEPAVFLTALLIIVGIPAATVITIVRLRATRRPLPAADVTARVEALESGLQGLQQELA
Ga0184631_100500483	3300018070	Groundwater Sediment	MHPAVFLAALLIFVGVPALTVFKIARLRATRPDSLSADFAARLEELE
Ga0184624_103926052	3300018073	Groundwater Sediment	MEPGVFLAALLIFVGIPAFTVLRIARLRAERRELPADVTARIEALESGMQDLQQQ
Ga0066655_107328712	3300018431	Grasslands Soil	LEPVVFLTALLILVGIPAVTVLKLARLRAARPQTPSADVTARLEEVERGV
Ga0066667_104274373	3300018433	Grasslands Soil	MEPGVFLAALLIFVGIPAFTVFKIARLRATRLQSPSADVTERLEAVEHRVEDLQQELAET
Ga0066667_106522701	3300018433	Grasslands Soil	LEPVVFLTALLILVGIPAVTVLKLARLRAARPQTPSADVTARLEEVERGVQDLRHELAETQERL
Ga0193739_11380081	3300020003	Soil	MEPAVFLVALLIIVGVPAATVITIVRLRATRRELPAAAVSGRLEALE
Ga0210404_105636981	3300021088	Soil	MEPVVFLAALLIFVGIPAFTVFKIARLRASRPESPSADVAARFEAIERGVQDLRQELAETQE
Ga0209519_103402512	3300025318	Soil	MEPVVFLAALLIFVGIPALTVFKIARLRATRLQSPSADVTERLEAVEHRVEDLQQELAET
Ga0209235_12271101	3300026296	Grasslands Soil	MEPPVFLAALLIFVGIPALTVIKLARLRAARPQSPSDEVVARLEAVEGRLQDLQQELVETQERLD
Ga0209236_11453443	3300026298	Grasslands Soil	MEPPVFLAALLIFVGIPALTVIKLARLRAARPQSPSD
Ga0209027_10814363	3300026300	Grasslands Soil	LEPAVFLAALLIFVGIPAYTVLKLARLRAARPQSAS
Ga0209239_11523863	3300026310	Grasslands Soil	LEPAVFLAALLIFVGIPAYTVLKLARLRAARPQSASADVTARLEEVERG
Ga0209761_11488083	3300026313	Grasslands Soil	MEPPVFLAALLIFVGIPALTVIKLARLRAARPQSPSDEVVARLEAVEVASKTFNKNS
Ga0209268_11131542	3300026314	Soil	LDPAVFLAALLIFVGIPAYTVLKLARLRAARPPSASADVTARLEEVERGVQDLRHELA
Ga0209152_101628421	3300026325	Soil	LEPAVFLAALLIFVGIPAYTVLKLARLRAARPQSASADVTARLEEVERGVQDLRHELAETQERL
Ga0209802_12067251	3300026328	Soil	MEPAVFLAALLIFVGIPALTVIKLARLRAARPQALSDDVTARLEALESRLQDLQQEQAE
Ga0209267_10175867	3300026331	Soil	LEPAVFLAALLIFVGIPAYTVLKLARLRAARPQSASADVTARLEEVERGVQDLRHELAETQER
Ga0209267_11442751	3300026331	Soil	LEPAVFLTALLILVGIPAVTVLKLARLRAARPQSASADVTARLEEVERGVQDLRHELAETQER
Ga0209803_12865622	3300026332	Soil	VEPTVFLAALLIFVGIPAYTVLKLARLRAARPQSPSADVTARLEEVERGVQDLRQELAET
Ga0209377_13384722	3300026334	Soil	LEPAVFLTALLIFVGIPAYTVLKLARLRAARPQSASADVTARLEEVERGVQDLRHELAET
Ga0209159_11378503	3300026343	Soil	VEPAVFLTALLILVGIPAVTVLKLARLRAARPQSGSADVTAR
Ga0209690_13027452	3300026524	Soil	LEPAVFLAALLIFVGIPAYTVLKLARLRAARPQSPSADVTARLEEVERGVQDLRQELAETQERL
Ga0209378_11503263	3300026528	Soil	MEPAVFLAALLIFVGIPAFTVLKIARLRATRPQSPS
Ga0209807_11509262	3300026530	Soil	LEPGVFLAALLIFVGIPAITVIKLARLRAARPQSLPADVTARLEGLEHGIQVLQ
Ga0209058_12796942	3300026536	Soil	MEPPVFLAALLIFVGIPAFTILRLARLRAARPQSLPAETAE
Ga0209056_103666521	3300026538	Soil	LDSAVFLVALLIFMGIPAFTVLRVARLRAARPQSPSADVTARLEAVERVVQ
Ga0209056_104708272	3300026538	Soil	LEPVVFLTALLILVGIPAVTVLKLARLRAARPQTPSADVTARLEEVER
Ga0209376_10392171	3300026540	Soil	LDSAVFLVALLIFMGIPAFTVLRVARLRAARPQSPSADVTARLEAVEHVVQDLQQQLAETQER
Ga0209897_10530242	3300027169	Groundwater Sand	MDPVVFLLALTIFVGIPAFTVLRIARLRAARPESLSADALGRLDALERDV
Ga0209689_12476022	3300027748	Soil	LEPAVFLAALLIFVGIPAYTVLKLARLRAARPQSASADVTARLEEVERGVQDLR
Ga0209283_109879372	3300027875	Vadose Zone Soil	MEPVVFLAALLIFVGIPALTVFKVARLRATRSESPSPDV
Ga0209486_100316535	3300027886	Agricultural Soil	MGPGVFLAALLIVVGIPAFTILRIMSMRAARLQSPS
Ga0307308_105077173	3300028884	Soil	MEPGVFLAALLIFVGIPAFTVLRIARLRAERRELPGDVT
Ga0307469_113507741	3300031720	Hardwood Forest Soil	LEPAVFLAALLIFVGIPAVTVLKLARLRAARPQSASADVTARLEEVERGVQDLRHEL
Ga0307473_112870872	3300031820	Hardwood Forest Soil	MEPGVFLAALLIFVGIPAFTVIKLARLRAARRESPSA
Ga0326732_10501911	3300033501	Peat Soil	MEPIVFLIALTMLVGIPAFTVIKVARLRAARQDSP
Ga0364936_108698_2_169	3300034773	Sediment	MEPIVFLAALLMLVGIPALTVLKIARLRATRLQSPPAEVTQRLEAVEHRVEDLQQE

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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