Metagenome Family F052832

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052832
Family Type	Metagenome
Number of Sequences	142
Average Sequence Length	76 residues
Representative Sequence	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFKAMPVRYMAR
Number of Associated Samples	106
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	46.43 %
% of genes near scaffold ends (potentially truncated)	42.96 %
% of genes from short scaffolds (< 2000 bps)	78.17 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.408 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (19.718 % of family members)
Environment Ontology (ENVO)	Unclassified (40.845 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.042 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.64% β-sheet: 0.00% Coil/Unstructured: 36.36%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF13467	RHH_4	6.34
PF04392	ABC_sub_bind	4.23
PF01042	Ribonuc_L-PSP	3.52
PF07238	PilZ	2.11
PF04342	DMT_6	2.11
PF02308	MgtC	2.11
PF03401	TctC	1.41
PF04773	FecR	1.41
PF00211	Guanylate_cyc	1.41
PF08734	GYD	1.41
PF01098	FTSW_RODA_SPOVE	1.41
PF13185	GAF_2	1.41
PF00072	Response_reg	0.70
PF12071	DUF3551	0.70
PF00775	Dioxygenase_C	0.70
PF00034	Cytochrom_C	0.70
PF06147	DUF968	0.70
PF13545	HTH_Crp_2	0.70
PF00027	cNMP_binding	0.70
PF16868	NMT1_3	0.70
PF02954	HTH_8	0.70
PF13414	TPR_11	0.70
PF01183	Glyco_hydro_25	0.70
PF12700	HlyD_2	0.70
PF13673	Acetyltransf_10	0.70
PF02518	HATPase_c	0.70
PF08241	Methyltransf_11	0.70
PF00857	Isochorismatase	0.70
PF05292	MCD	0.70
PF01844	HNH	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.23
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	3.52
COG1285	Magnesium uptake protein YhiD/SapB, involved in acid resistance	Inorganic ion transport and metabolism [P]	2.11
COG3169	Uncharacterized membrane protein, DMT/DUF486 family	Function unknown [S]	2.11
COG3174	Membrane component of predicted Mg2+ transport system, contains DUF4010 domain	Inorganic ion transport and metabolism [P]	2.11
COG0772	Peptodoglycan polymerase FtsW/RodA/SpoVE	Cell cycle control, cell division, chromosome partitioning [D]	1.41
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.41
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.41
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	1.41
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.70
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.70
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.70
COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	Cell wall/membrane/envelope biogenesis [M]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.41 %
All Organisms	root	All Organisms	48.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.41 %
cellular organisms	root	All Organisms → cellular organisms	48.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.41 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.41 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.03 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.41 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.58 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	1.41 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.41 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21.13 %
unclassified Armatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes	1.41 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.70 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.70 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.41 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.75 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	2.11 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	1.41 %
Tepidamorphaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Tepidamorphaceae	0.70 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.70 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.70 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.70 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.70 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.41 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.63 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	2.11 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	1.41 %
Tepidamorphus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Tepidamorphaceae → Tepidamorphus	0.70 %
Nitrosovibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosovibrio	0.70 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.70 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.70 %
Thermohalobaculum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Thermohalobaculum	0.70 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.41 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	1.41 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	1.41 %
Tepidamorphus gemmatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Tepidamorphaceae → Tepidamorphus → Tepidamorphus gemmatus	0.70 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.70 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.70 %
Thermohalobaculum xanthum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Thermohalobaculum → Thermohalobaculum xanthum	0.70 %
unclassified Nitrosovibrio	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosovibrio → unclassified Nitrosovibrio	0.70 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.70 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.70 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.41 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1.41 %
Armatimonadetes bacterium 13_1_40CM_3_65_7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	1.41 %
Nitrosovibrio sp. Nv17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosovibrio → unclassified Nitrosovibrio → Nitrosovibrio sp. Nv17	0.70 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.70 %
Tepidamorphus gemmatus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Tepidamorphaceae → Tepidamorphus → Tepidamorphus gemmatus	0.70 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.70 %
Thermohalobaculum xanthum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Thermohalobaculum → Thermohalobaculum xanthum	0.70 %
Pseudolabrys taiwanensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	0.70 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.70 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q01AE8KI	Not Available	507	Open in IMG/M
2199352025\|deepsgr__Contig_9982	Not Available	573	Open in IMG/M
3300000041\|ARcpr5oldR_c008219	Not Available	885	Open in IMG/M
3300000042\|ARSoilYngRDRAFT_c02604	Not Available	701	Open in IMG/M
3300000156\|NODE_c0642094	All Organisms → cellular organisms → Bacteria → Proteobacteria	2121	Open in IMG/M
3300000156\|NODE_c0734850	All Organisms → cellular organisms → Bacteria	9450	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1006690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1873	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10039959	Not Available	1244	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10148322	Not Available	565	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1022767	Not Available	1176	Open in IMG/M
3300000787\|JGI11643J11755_10790946	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300001915\|JGI24741J21665_1012293	All Organisms → cellular organisms → Bacteria → Proteobacteria	1475	Open in IMG/M
3300002073\|JGI24745J21846_1000618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3198	Open in IMG/M
3300002126\|JGI24035J26624_1001879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1958	Open in IMG/M
3300004463\|Ga0063356_100130996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2810	Open in IMG/M
3300004463\|Ga0063356_101706458	Not Available	942	Open in IMG/M
3300004633\|Ga0066395_10031731	All Organisms → cellular organisms → Bacteria → Proteobacteria	2208	Open in IMG/M
3300004643\|Ga0062591_101611656	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300005103\|Ga0066813_1012253	Not Available	547	Open in IMG/M
3300005163\|Ga0066823_10148915	Not Available	517	Open in IMG/M
3300005330\|Ga0070690_100067614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2315	Open in IMG/M
3300005331\|Ga0070670_100016592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6319	Open in IMG/M
3300005332\|Ga0066388_100103073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3324	Open in IMG/M
3300005332\|Ga0066388_100283987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2298	Open in IMG/M
3300005332\|Ga0066388_100881986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1475	Open in IMG/M
3300005332\|Ga0066388_100883716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1474	Open in IMG/M
3300005332\|Ga0066388_104886810	Not Available	681	Open in IMG/M
3300005332\|Ga0066388_105231614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosovibrio → unclassified Nitrosovibrio → Nitrosovibrio sp. Nv17	658	Open in IMG/M
3300005332\|Ga0066388_106285020	Not Available	599	Open in IMG/M
3300005337\|Ga0070682_100012748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4825	Open in IMG/M
3300005337\|Ga0070682_102000426	Not Available	509	Open in IMG/M
3300005366\|Ga0070659_100686251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	885	Open in IMG/M
3300005434\|Ga0070709_10002351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10247	Open in IMG/M
3300005539\|Ga0068853_100761644	Not Available	926	Open in IMG/M
3300005547\|Ga0070693_101451015	Not Available	535	Open in IMG/M
3300005713\|Ga0066905_100308850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1246	Open in IMG/M
3300005713\|Ga0066905_101358357	Not Available	642	Open in IMG/M
3300005764\|Ga0066903_102253101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1051	Open in IMG/M
3300005764\|Ga0066903_106230932	All Organisms → cellular organisms → Bacteria	623	Open in IMG/M
3300005764\|Ga0066903_108103985	Not Available	538	Open in IMG/M
3300005764\|Ga0066903_108830994	Not Available	511	Open in IMG/M
3300006172\|Ga0075018_10556286	Not Available	605	Open in IMG/M
3300006954\|Ga0079219_10717969	Not Available	764	Open in IMG/M
3300009545\|Ga0105237_11225545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	757	Open in IMG/M
3300009792\|Ga0126374_10074247	All Organisms → cellular organisms → Bacteria → Proteobacteria	1832	Open in IMG/M
3300009792\|Ga0126374_10329669	Not Available	1037	Open in IMG/M
3300010046\|Ga0126384_10905762	Not Available	797	Open in IMG/M
3300010047\|Ga0126382_10749566	Not Available	826	Open in IMG/M
3300010047\|Ga0126382_11578946	Not Available	607	Open in IMG/M
3300010048\|Ga0126373_11924055	All Organisms → cellular organisms → Bacteria → Proteobacteria	654	Open in IMG/M
3300010358\|Ga0126370_11429799	Not Available	654	Open in IMG/M
3300010359\|Ga0126376_10510936	Not Available	1115	Open in IMG/M
3300010359\|Ga0126376_10823411	Not Available	909	Open in IMG/M
3300010359\|Ga0126376_11584434	Not Available	686	Open in IMG/M
3300010360\|Ga0126372_11333523	Not Available	747	Open in IMG/M
3300010362\|Ga0126377_10069610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3126	Open in IMG/M
3300010362\|Ga0126377_10077396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2977	Open in IMG/M
3300010362\|Ga0126377_10090753	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2765	Open in IMG/M
3300010362\|Ga0126377_10189204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Thermohalobaculum → Thermohalobaculum xanthum	1964	Open in IMG/M
3300010362\|Ga0126377_11848335	Not Available	679	Open in IMG/M
3300010362\|Ga0126377_12709113	Not Available	571	Open in IMG/M
3300010366\|Ga0126379_10038424	All Organisms → cellular organisms → Bacteria → Proteobacteria	3824	Open in IMG/M
3300010366\|Ga0126379_10352971	Not Available	1502	Open in IMG/M
3300010366\|Ga0126379_10798369	Not Available	1043	Open in IMG/M
3300010366\|Ga0126379_12213479	Not Available	651	Open in IMG/M
3300012951\|Ga0164300_10006195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3475	Open in IMG/M
3300012971\|Ga0126369_10056060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3391	Open in IMG/M
3300012971\|Ga0126369_10595322	All Organisms → cellular organisms → Bacteria → Proteobacteria	1175	Open in IMG/M
3300012971\|Ga0126369_10596374	Not Available	1174	Open in IMG/M
3300012971\|Ga0126369_11215399	All Organisms → cellular organisms → Bacteria → Proteobacteria	843	Open in IMG/M
3300012986\|Ga0164304_11011951	Not Available	659	Open in IMG/M
3300012988\|Ga0164306_10000948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12489	Open in IMG/M
3300014745\|Ga0157377_11127665	Not Available	602	Open in IMG/M
3300014969\|Ga0157376_10173903	Not Available	1963	Open in IMG/M
3300015371\|Ga0132258_10189664	All Organisms → cellular organisms → Bacteria → Proteobacteria	4978	Open in IMG/M
3300015371\|Ga0132258_10500830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3037	Open in IMG/M
3300015371\|Ga0132258_11981554	All Organisms → cellular organisms → Bacteria	1465	Open in IMG/M
3300015371\|Ga0132258_13306043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1109	Open in IMG/M
3300015373\|Ga0132257_102089520	Not Available	732	Open in IMG/M
3300015373\|Ga0132257_104174039	Not Available	525	Open in IMG/M
3300015374\|Ga0132255_101832598	Not Available	922	Open in IMG/M
3300017947\|Ga0187785_10194452	Not Available	879	Open in IMG/M
3300017947\|Ga0187785_10676711	Not Available	539	Open in IMG/M
3300017959\|Ga0187779_10313649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1006	Open in IMG/M
3300017973\|Ga0187780_10011719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6455	Open in IMG/M
3300019356\|Ga0173481_10011351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	2527	Open in IMG/M
3300021560\|Ga0126371_10620645	Not Available	1230	Open in IMG/M
3300021560\|Ga0126371_10926972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1014	Open in IMG/M
3300021560\|Ga0126371_13014286	Not Available	570	Open in IMG/M
3300023066\|Ga0247793_1069844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	585	Open in IMG/M
3300023261\|Ga0247796_1054393	Not Available	702	Open in IMG/M
3300024177\|Ga0247686_1017988	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300025271\|Ga0207666_1001138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3143	Open in IMG/M
3300025321\|Ga0207656_10291024	Not Available	807	Open in IMG/M
3300025899\|Ga0207642_10850570	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300025906\|Ga0207699_10005339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6157	Open in IMG/M
3300025911\|Ga0207654_10050750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → unclassified Armatimonadetes → Armatimonadetes bacterium 13_1_40CM_3_65_7	2385	Open in IMG/M
3300025981\|Ga0207640_10502374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1010	Open in IMG/M
3300025986\|Ga0207658_12043526	Not Available	521	Open in IMG/M
3300026041\|Ga0207639_10576964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1035	Open in IMG/M
3300026095\|Ga0207676_10107235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	2329	Open in IMG/M
3300026807\|Ga0207547_103306	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300026817\|Ga0207775_118117	Not Available	529	Open in IMG/M
3300026822\|Ga0207498_103934	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300026839\|Ga0207764_107930	Not Available	1035	Open in IMG/M
3300026869\|Ga0207821_1005475	All Organisms → cellular organisms → Bacteria	1391	Open in IMG/M
3300026932\|Ga0207836_1023654	Not Available	745	Open in IMG/M
3300026947\|Ga0207853_1052399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis	507	Open in IMG/M
3300026959\|Ga0207852_1008000	All Organisms → cellular organisms → Bacteria	1186	Open in IMG/M
3300026979\|Ga0207817_1029186	Not Available	587	Open in IMG/M
3300027019\|Ga0207857_1004980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2518	Open in IMG/M
3300027401\|Ga0208637_1024363	Not Available	674	Open in IMG/M
3300027460\|Ga0207506_1015992	Not Available	580	Open in IMG/M
3300027523\|Ga0208890_1061243	Not Available	606	Open in IMG/M
3300027682\|Ga0209971_1027859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1351	Open in IMG/M
3300027775\|Ga0209177_10148777	Not Available	792	Open in IMG/M
3300027992\|Ga0247750_1006462	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10022966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1606	Open in IMG/M
3300031226\|Ga0307497_10489250	All Organisms → cellular organisms → Bacteria → Proteobacteria	605	Open in IMG/M
3300031231\|Ga0170824_124335016	Not Available	1079	Open in IMG/M
3300031446\|Ga0170820_10537229	Not Available	1157	Open in IMG/M
3300031469\|Ga0170819_10414817	Not Available	704	Open in IMG/M
3300031562\|Ga0310886_10375448	Not Available	833	Open in IMG/M
3300031716\|Ga0310813_10022888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4294	Open in IMG/M
3300031720\|Ga0307469_12018955	Not Available	560	Open in IMG/M
3300031763\|Ga0318537_10361646	Not Available	535	Open in IMG/M
3300031770\|Ga0318521_10220777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1100	Open in IMG/M
3300031894\|Ga0318522_10392376	Not Available	526	Open in IMG/M
3300031908\|Ga0310900_10480254	Not Available	962	Open in IMG/M
3300031912\|Ga0306921_11782229	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300031944\|Ga0310884_11048578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300032000\|Ga0310903_10762818	Not Available	527	Open in IMG/M
3300032075\|Ga0310890_10740328	Not Available	774	Open in IMG/M
3300032179\|Ga0310889_10231367	Not Available	868	Open in IMG/M
3300032180\|Ga0307471_101064984	Not Available	975	Open in IMG/M
3300032421\|Ga0310812_10019642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Tepidamorphaceae → Tepidamorphus → Tepidamorphus gemmatus	2368	Open in IMG/M
3300032828\|Ga0335080_11828598	Not Available	592	Open in IMG/M
3300032893\|Ga0335069_11031739	Not Available	911	Open in IMG/M
3300033004\|Ga0335084_11177066	All Organisms → cellular organisms → Bacteria → Proteobacteria	767	Open in IMG/M
3300033513\|Ga0316628_102421173	Not Available	694	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.17%
Host-Associated	Host-Associated	20.42%
Engineered	Engineered	1.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.46%
Plants	Host-Associated → Plants	20.42%
Solid Waste	Engineered → Solid Waste	1.41%
Aquatic	Environmental → Aquatic	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.34%
Grass	Engineered → Solid Waste → Grass	1.41%
Sediment	Environmental → Aquatic → Sediment	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.41%
Loam	Environmental → Terrestrial → Soil → Loam	19.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.63%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.82%
Composting	Engineered → Solid Waste → Grass → Composting	1.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.70%
Sand	Environmental → Terrestrial → Soil → Sand	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.87%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.49%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.34%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.63%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.63%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.41%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	1.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.70%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.70%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	19.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.49%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.82%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.82%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.11%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.11%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.41%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.41%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.41%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.41%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	1.41%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.70%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.70%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000041	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere	Host-Associated	Open in IMG/M
3300000042	Arabidopsis rhizosphere soil microbial communities from the University of North Carolina - sample from Arabidopsis soil young	Host-Associated	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001915	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7	Host-Associated	Open in IMG/M
3300002073	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4	Host-Associated	Open in IMG/M
3300002126	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Host-Associated	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005103	Soil and rhizosphere microbial communities from Laval, Canada - mgLAA	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300024177	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK27	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026807	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G09A5-11 (SPAdes)	Environmental	Open in IMG/M
3300026817	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 17 (SPAdes)	Environmental	Open in IMG/M
3300026822	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A1-12 (SPAdes)	Environmental	Open in IMG/M
3300026839	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 52 (SPAdes)	Environmental	Open in IMG/M
3300026869	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 53 (SPAdes)	Environmental	Open in IMG/M
3300026932	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 18 (SPAdes)	Environmental	Open in IMG/M
3300026947	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 6 (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300026979	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 13 (SPAdes)	Environmental	Open in IMG/M
3300027019	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 22 (SPAdes)	Environmental	Open in IMG/M
3300027401	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)	Environmental	Open in IMG/M
3300027460	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE17-C (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027992	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S125-311R-5	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_07413780	2170459005	Grass Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAIPVRYMAR
deepsgr_01530210	2199352025	Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAIPVRYMARQ
ARcpr5oldR_0082192	3300000041	Arabidopsis Rhizosphere	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHVTEAAVVAFKAMPVRYIAR*
ARSoilYngRDRAFT_026041	3300000042	Arabidopsis Rhizosphere	DGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHVTEAAVVAFKAMPVRYIAR*
NODE_06420943	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MTIESIIRRRAFRDGFYDGRQGCAMRRLATRKARWLYALGRIFANVAPADIQVYEQRQATAAAVAAFKAIPVRYAAR*
NODE_07348502	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MTIESIIRRRAFRDGFYDGRQGCPMRRLATCKTRWLYALGRIFANVAPPNLQVYEQRHATEAAVAAFRAMPVRYTAH*
AF_2010_repII_A01DRAFT_10066906	3300000580	Forest Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRFATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPVRCMAR*
AF_2010_repII_A1DRAFT_100399593	3300000597	Forest Soil	MTTESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYAMGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPVRCMAR*
AF_2010_repII_A1DRAFT_101483221	3300000597	Forest Soil	TVTERASVMTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPVRCMAR*
AF_2010_repII_A100DRAFT_10227671	3300000655	Forest Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAIPVRY*
JGI11643J11755_107909462	3300000787	Soil	MTIESIIRRRAFRDGFHDGRHGCPMRRLASCKARWLYALGRIFANVAPTNVQIYEQRHVSKAAVAAFAAMPARY*
JGI24741J21665_10122931	3300001915	Corn Rhizosphere	IRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHATEAAVAAFKAMPVRYMAR*
JGI24745J21846_10006181	3300002073	Corn, Switchgrass And Miscanthus Rhizosphere	SVMTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHATEAAVAAFKAMPVRYMAR*
JGI24035J26624_10018794	3300002126	Corn, Switchgrass And Miscanthus Rhizosphere	EGASVMTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHATEAAVAAFKAMPVRYMAR*
Ga0063356_1001309963	3300004463	Arabidopsis Thaliana Rhizosphere	MTIESIIRRRAFRDGFHDGRHGCPMRRLASCKARWLYALGRIFANVAPTNVQIYEQRHVSKAAVAAFAAMPARYLVL*
Ga0063356_1017064582	3300004463	Arabidopsis Thaliana Rhizosphere	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVA
Ga0066395_100317314	3300004633	Tropical Forest Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKTRWLYALGRIFANVAPTDLQVYEQRHATEAAVAAFRAMPVRCMAR*
Ga0062591_1016116562	3300004643	Soil	MTIESIIRRRAFRDGFHDGRHGCPMRRLASCKARWLYALGRIFANVAPTNVQIYEQRHVSKAAVAAFAAMPARYLAL*
Ga0066813_10122531	3300005103	Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAIPVRYMAR*
Ga0066823_101489151	3300005163	Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANAAPTNLQVYEQRHATEAAVAAFRAIPVRYLAR*
Ga0070690_1000676141	3300005330	Switchgrass Rhizosphere	IIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHATEAAVAAFKAMPVRYMAR*
Ga0070670_1000165926	3300005331	Switchgrass Rhizosphere	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPPRYIGPLAAAG*
Ga0066388_1001030735	3300005332	Tropical Forest Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPTRYMGH*
Ga0066388_1002839872	3300005332	Tropical Forest Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKTRWLYALGRIFANVASTNLQIYEQRHATEAAIAAFRVMPVRCMPRNLLPPPKSLPAVQ*
Ga0066388_1008819863	3300005332	Tropical Forest Soil	MTTESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYAMGRIFANVAPTNLQVYEQRHATEGAVAAFRAMPVRCMAR*
Ga0066388_1008837163	3300005332	Tropical Forest Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRFATRKARWLYALGRIFANVAPANLQVYEQRHATEAAVAAFRAMPVRCMAR*
Ga0066388_1048868102	3300005332	Tropical Forest Soil	IMTIESIIRRRAFRDGFYDGRQGCSMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPVRWMAR*
Ga0066388_1052316141	3300005332	Tropical Forest Soil	VMTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPANLQVYEQCHATEAAVAAFRAMPVRCMAR*
Ga0066388_1062850201	3300005332	Tropical Forest Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKTRWLYALGRIFANVAPTKLQVYEQRHATEAAVAAFRAMPVRCMAR*
Ga0070682_1000127487	3300005337	Corn Rhizosphere	PGMTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPPRYIGPLAAAG*
Ga0070682_1020004261	3300005337	Corn Rhizosphere	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHATEAAVAAFKAMPVRYMAR*
Ga0070673_1012148401	3300005364	Switchgrass Rhizosphere	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAIAAFRSMAPRYIGPLAAAGPPRFPGFENRLHGVRSWV
Ga0070659_1006862512	3300005366	Corn Rhizosphere	LKSGMTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPPRYIGPLAAAG*
Ga0070709_1000235113	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GMTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPPRYIGPLAAAG*
Ga0068853_1007616441	3300005539	Corn Rhizosphere	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPADIQVYEQRHATAAAVAAFRAIPVRYS
Ga0070693_1014510151	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MTIESIIRRRAFRDGFYDGRQGCPMRCLATRKARWLYALGRIFANVAPADIQVYEQRHATAAAV
Ga0066905_1003088502	3300005713	Tropical Forest Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHATEAAVAAFRAMPVRYIAR*
Ga0066905_1013583572	3300005713	Tropical Forest Soil	MTIEAIIRRRAFRDGFCDGRQGCPMRRLATHKTRWLYALGRIFANVAPTNLQVYEQRHATEAAVVAFRAMPVRYMAR*
Ga0066903_1022531011	3300005764	Tropical Forest Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPVRCMAH*
Ga0066903_1062309321	3300005764	Tropical Forest Soil	TIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPANLQVYEQCHATEAAVAAFRAMPVRCMAR*
Ga0066903_1081039852	3300005764	Tropical Forest Soil	MTIESVIRRRAFCDGLYDGRQGCPMRRLATRKTRWLYALGRIFANVAPTNLQVYEHRHATEAAVAAFRAMPVRCMAR*
Ga0066903_1088309943	3300005764	Tropical Forest Soil	AFRDGFYDGRQGCPMRRLATRKTRWLYALGRIFANVAPTKLQVYEQRHATEAAIAAFRAMPVRCMAR*
Ga0075018_105562861	3300006172	Watersheds	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAIPVRYMARP*
Ga0079219_107179692	3300006954	Agricultural Soil	MTIESIIRRRAFRDGFYDGRQGCPMRCLATRKARWLYALGRIFANVAPADIQVYEQRHATAAAVAAFRAIPVRYSAR*
Ga0105237_112255451	3300009545	Corn Rhizosphere	IIRRRAFRDGFYDGRQGCPMRCLATRKARWLYALGRIFANVAPADIQVYEQRHATAAAVAAFRAIPVRYSAR*
Ga0126374_100742473	3300009792	Tropical Forest Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKTRWLYALGRIFANVAATDLQVYEQRHATEAAVAAFRAMPVRCMAR*
Ga0126374_103296693	3300009792	Tropical Forest Soil	MTIESIIRRRAFRDGFYDGRQGCSMRRLATRKARWLYALGRIFANVAPTNVQVYEQRHATEAAVAAFRAMPVRYMAR*
Ga0126384_109057621	3300010046	Tropical Forest Soil	MTIESIIRRRAFRDGFYDGRQGCSMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPVRWMAR*
Ga0126382_107495661	3300010047	Tropical Forest Soil	MTVESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNMQVYEQRHATEAAVAAFRAMPVRCMAR*
Ga0126382_115789461	3300010047	Tropical Forest Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHATEAAIAAFRAMPVRYMAR*
Ga0126373_119240552	3300010048	Tropical Forest Soil	MTIEAIIRRRAFRDGFYDGRQGCPMRRLATRKTRWLYALGRIFANVAPTDLQVYEQRHATEAAVAAFRAMPVRCMAR*
Ga0126370_114297991	3300010358	Tropical Forest Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRFATRKARWLYALGRIFANVAPANLQVYEQRHATEAAVAAFKAMPVRCMAR*
Ga0126376_105109361	3300010359	Tropical Forest Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATCKTRWLYALGRIFANVAPTNLQLYEQRHATEAAVAVFRAMPVRYTAR*
Ga0126376_108234111	3300010359	Tropical Forest Soil	MTIESIIRRRAFRDGFYDGRQGCSMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPVRYMAR*
Ga0126376_115844341	3300010359	Tropical Forest Soil	MTIESILRRRAFRDAFYDGRQGCPMRRLATRKTRWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPVRCVAR*
Ga0126372_113335232	3300010360	Tropical Forest Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKTRWLYALGRIFANVASTNLQIYEQRHATEAAIAAFRVMPVRCMSRNLLPPPKSVPAVQ*
Ga0126377_100696103	3300010362	Tropical Forest Soil	MTIESILRRRAFRDGFYDGRQGCPMRRLATRKTRWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPVRCVAR*
Ga0126377_100773961	3300010362	Tropical Forest Soil	SIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPTRYMAR*
Ga0126377_100907532	3300010362	Tropical Forest Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKTRWLYALGRIFANVAPTNLQVYEQRHATEAAIAAFRAMPARYMAR*
Ga0126377_101892041	3300010362	Tropical Forest Soil	SIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHATEAAVAAFKAMPVRYMAR*
Ga0126377_118483352	3300010362	Tropical Forest Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLASRKARWLYALGRIFANVAPTSIQVYEQRHATAAAVAAFRAMPVRYMAR*
Ga0126377_127091131	3300010362	Tropical Forest Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFR
Ga0126379_100384241	3300010366	Tropical Forest Soil	RAFRDGFYDGRQGCPMRRFATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPVRCMAR*
Ga0126379_103529711	3300010366	Tropical Forest Soil	MTTESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYAMGRIFANVAPTNLQVYEQRHATEAAVVAFRAIPVRCMAR*
Ga0126379_107983691	3300010366	Tropical Forest Soil	MTIESIIRRRAFRDGFYDGRQGCSMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAV
Ga0126379_122134791	3300010366	Tropical Forest Soil	MTVESIIRRRAFRDGFYDGRQGCPMRRLATRKTRWLYALGRIFANVAPTDLQVYEQRHAPEAAVAAFRAMPVRCMAR*
Ga0164300_100061951	3300012951	Soil	RDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPPRYIGPLAAAG*
Ga0126369_100560603	3300012971	Tropical Forest Soil	MTIEAIIRRRAFRDGFYDGRQGCPMRRLATRKTRWLYALGRIFANVAPTNLQVYEQRHATEAAIAAFRAMPVRCMGR*
Ga0126369_105953221	3300012971	Tropical Forest Soil	SIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPANLQVYEQCHATEAAVAAFRAMPVRCMAR*
Ga0126369_105963741	3300012971	Tropical Forest Soil	MTIEAIIRRRAFRDGFYDGRQGCPMRRLATRKTRWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPVRCMAR*
Ga0126369_112153991	3300012971	Tropical Forest Soil	MTIESIIRRRGFRDGFYDGRQGCPMRRLATRKTRWLYALGRIFANVAPTDLQVYEQRHATEAAVAAFRAMPVRCMAR*
Ga0164304_110119512	3300012986	Soil	EGASVMTIESIIRRRAFRDGFYDGRQGYPMRRLATRKACWLYALGRIFANLAPTNLQVYEQRQATEAAIAAFKAMPVRYMAR*
Ga0164306_100009486	3300012988	Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVSPTNLQVYEQRHATEAAVAAFRAMPPRYIGPLAAAG*
Ga0157377_111276651	3300014745	Miscanthus Rhizosphere	MTIESIIRSRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRWMPPRYIGPLAAAG*
Ga0157376_101739033	3300014969	Miscanthus Rhizosphere	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAIPVRYMARQ*
Ga0132258_101896646	3300015371	Arabidopsis Rhizosphere	MTIESILRRRAFRDGFYDGRQGCSMRCLASRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPVRYMAR*
Ga0132258_105008303	3300015371	Arabidopsis Rhizosphere	MTIESIIRRRAFRDGFHDGRHGCPMRRLATCKARWLYALGRIFANVAPTNVQIYEQRHVSKAAVAAFAAMSARYLAL*
Ga0132258_119815543	3300015371	Arabidopsis Rhizosphere	ESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHATEAAVAAFKAMPVRYMAR*
Ga0132258_133060432	3300015371	Arabidopsis Rhizosphere	RASKPGMTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPPRYIGPLAAAG*
Ga0132257_1020895201	3300015373	Arabidopsis Rhizosphere	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANAAPTNLQVYEQRHATEAAVAAFRAIPVRYMAR*
Ga0132257_1041740391	3300015373	Arabidopsis Rhizosphere	MTIESILRRRAFRDGFYDGRQGCSMRCLASRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPRPSRYL*
Ga0132255_1018325982	3300015374	Arabidopsis Rhizosphere	GFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHVTEAAVVAFKAMPVRYIAR*
Ga0187785_101944522	3300017947	Tropical Peatland	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVASTNLQIYEQRHATEAAIAAFRVMPVRCMPRNLLPPPKSLPAVQ
Ga0187785_106767111	3300017947	Tropical Peatland	IRRRAFRDGFHDGRNGCSMRRLATRKARWLYALGRIFANIAPTNVQIFEQRRVSEVAIAAFAAMPVRY
Ga0187779_103136492	3300017959	Tropical Peatland	SIIRRRTFRDGFHDGRQGCPMRRLTTRKARWLYALGRIFANVAPTNMQIYEHGHVSDAAVVAFAAMPVRH
Ga0187780_100117193	3300017973	Tropical Peatland	MTIESIIRRRTFRDGFHDGRQGCPMRRLTTRKARWLYALGRIFANVAPTNMQIYEHGHVSDAAVVAFAAMPVRH
Ga0173481_100113512	3300019356	Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHATEAAVAAFKAMPVRYMAR
Ga0126371_106206453	3300021560	Tropical Forest Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKTRWLYALGRIFANVAPTDLQVYEQRHATEAAVAAFRAMPVRCMAR
Ga0126371_109269721	3300021560	Tropical Forest Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRFATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPVRCMAR
Ga0126371_130142861	3300021560	Tropical Forest Soil	MTIEAIIRRRAFRDGFYDGRQGCPMRRLATRKTRWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPVRYMAR
Ga0247793_10698442	3300023066	Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHATEAAVAAF
Ga0247796_10543932	3300023261	Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHATEAAVAAFKAMPVRYMA
Ga0247686_10179881	3300024177	Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAA
Ga0247693_10387301	3300024181	Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEA
Ga0207666_10011383	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHATEAAVAAFKAMPV
Ga0207656_102910242	3300025321	Corn Rhizosphere	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHATEAAVAAFKA
Ga0207642_108505702	3300025899	Miscanthus Rhizosphere	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVDAFRAMPPRYIGPLAAAG
Ga0207699_100053397	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	RRASKPGMTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPPRYIGPLAAAG
Ga0207654_100507504	3300025911	Corn Rhizosphere	MTIESIIRRRAFRDGFYDGRRGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHATEAAVAAFKAMPVRYMAR
Ga0207640_105023741	3300025981	Corn Rhizosphere	SSVTERASVMTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPPRYIGPLAAAG
Ga0207658_120435261	3300025986	Switchgrass Rhizosphere	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHATEAAVAAFKAM
Ga0207639_105769641	3300026041	Corn Rhizosphere	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPADIQVYEQRHATAAAVAAFRAIPVRYSAR
Ga0207676_101072351	3300026095	Switchgrass Rhizosphere	QPRRASKPGMTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPPRYIGPLAAAG
Ga0207547_1033061	3300026807	Soil	AFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHATEAAVAAFKAMPVRYMAR
Ga0207775_1181171	3300026817	Tropical Forest Soil	MTIESILRRRAFRDGFHDGRRGCPMRRLATRRARWLYALGRIFANVAPAEMRIYERRQVTEA
Ga0207498_1039342	3300026822	Soil	TIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHATEAAVAAFKAMPVRYMAR
Ga0207764_1079303	3300026839	Tropical Forest Soil	MTIESILRRRAFRDGFHDGRRGFPMRRLATRRARWLYALGRIFANVAPADVRIYERRQVTQAAIAAFAAMPARY
Ga0207821_10054751	3300026869	Tropical Forest Soil	ANTRQINSNKKGTPAMTIESILRRRAFRDGFHDGRRGCPMRRLATRRARWLYALGRIFANVAPAEMRIYERRQVTEAAVAAFAAMPARY
Ga0207836_10236541	3300026932	Tropical Forest Soil	IESILRRRAFRDGFHDGRRGCPMRRLATRRARWLYALGRIFANVAPAEMRIYERRQVTEAAVAAFAAMPARY
Ga0207853_10523992	3300026947	Tropical Forest Soil	MTIESILRRRAFRDGFHDGRRGCPMRRLATRRARWLYALGRIFANVAPAEMRIYERRQVTEAAV
Ga0207852_10080001	3300026959	Tropical Forest Soil	KKGTPAMTIESILRRRAFRDGFHDGRRGCPMRRLATRRARWLYALGRIFANVAPAEMRIYERRQVTEAAVAAFAAMPARY
Ga0207817_10291861	3300026979	Tropical Forest Soil	NKKGTPAMTIESILRRRAFRDGFHDGRRGCPMRRLATRRARWLYALGRIFANVAPAEMRIYERRQVTEAAVAAFAAMPARY
Ga0207857_10049801	3300027019	Tropical Forest Soil	MTIESILRRRAFRDGFHDGRRGCPMRRLATRRARWLYALGRIFANVAPAEMRIYERRQVTEAAVAAFAAMPARY
Ga0208637_10243632	3300027401	Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANAAPTNLQVYEQRHATEAAVAAFRAIPVRYMAR
Ga0207506_10159922	3300027460	Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAA
Ga0208890_10612432	3300027523	Soil	MTIESIIRRRAFRDGFYDGHQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAI
Ga0209971_10278592	3300027682	Arabidopsis Thaliana Rhizosphere	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHATEAAIAAFKAMPVRYMARF
Ga0209177_101487771	3300027775	Agricultural Soil	TERLSVTERASVMTIESIIRRRAFRDGFHDGRQGCPMRRLASRKARWLYALGRMFANVAPANLQVYEQRHATEAAVAAFRAMPARYFAQ
Ga0247750_10064621	3300027992	Soil	TEGASVMTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHATEAAVAAFKAMPVRYMAR
(restricted) Ga0255310_100229662	3300031197	Sandy Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLTTRKARWLYALGRIFANVAPTNMQVYEQRHATEAAVAAFSAMPVRYMAR
Ga0307497_104892502	3300031226	Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQSHATEAAVAAFKAMPVRYMAR
Ga0170824_1243350162	3300031231	Forest Soil	MTIESIIRRRAFRDGFYDGRQECPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAIPVRYMARP
Ga0170820_105372292	3300031446	Forest Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAIPVRYMARP
Ga0170819_104148171	3300031469	Forest Soil	MTIESIIRRRAFRDGFYDGRQECPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAIPVRYIAR
Ga0310886_103754481	3300031562	Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAIPVRYL
Ga0310813_100228883	3300031716	Soil	MTIESIIRRRAFRDGFHDGRHGCPMRRLASCKARWLYALGRIFANVAPTNVQIYEQRHVSKAAVAAFAATPARYLVL
Ga0307469_120189552	3300031720	Hardwood Forest Soil	ASVMTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNVQVYEQRHATEAAVAAFSAMPVRYLAR
Ga0318537_103616461	3300031763	Soil	GFYDGRQGCPMRRLATRKTRWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPVRYMAR
Ga0318521_102207772	3300031770	Soil	MTIEAIIRRRAFRDGFYDGRQGCPMRRLATRKTRWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPVQYMAR
Ga0318522_103923761	3300031894	Soil	MTIEAIIRRRAFRDGFYDGRQGCPMRRLATRKTRWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFRAMPVRY
Ga0310900_104802542	3300031908	Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANHAPTNLQVYEQRHATEAAV
Ga0306921_117822291	3300031912	Soil	GFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATDAAVAAFRAMPVRCMAR
Ga0310884_110485782	3300031944	Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHATEAAVA
Ga0310903_107628181	3300032000	Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTNLQVYEQRHATEAAVAAFKAMPVRYMAR
Ga0310890_107403281	3300032075	Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHVTEAAVVAFKAMPVRYIAR
Ga0310889_102313671	3300032179	Soil	MPDPESALHDELVAQVKRQNRKVHLLRNGLVMTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANLAPTNLQVYEQRHVTEAAVVAFKAMPVRYIAR
Ga0307471_1010649842	3300032180	Hardwood Forest Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPTDLQVYEQRHATEAAVVAFRAMPARYFAH
Ga0310812_100196422	3300032421	Soil	MTIESIIRRRAFRDGFHDGRHGCPMRRLASCKARWLYALGRIFANVAPTNVQIYEQRHVSKAAVAAFAAMPARYLVL
Ga0335080_118285981	3300032828	Soil	MTIESIIRRRAFRDGFYDGRQGCSMRRLATRKARWLYALGRIFANVAPTNVQVYEQRHATEAAVAAFRAMPVRYMAR
Ga0335069_110317393	3300032893	Soil	QRQNRKGHPLSKWARVMTIESIIRRRTFRDGFHDGRQGCPMRRLATRKARWLYALGRIFANVVPNNVQIYEQGHVTSAAVAAFAAMPVRY
Ga0335084_111770661	3300033004	Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPINVQIYEQRHVTEAA
Ga0316628_1024211731	3300033513	Soil	MTIESIIRRRAFRDGFYDGRQGCPMRRLATRKARWLYALGRIFANVAPANVQIYEQRHVTEAAVTAFAAMPVRYLAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters