Metagenome / Metatranscriptome Family F052911

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F052911
Family Type	Metagenome / Metatranscriptome
Number of Sequences	142
Average Sequence Length	87 residues
Representative Sequence	VDDEVVTRELGFAVGVLRRATFRREVQQVCVELGLGCEIDERRRLLTTRVRVLVRGSREGVDALVDYARVSGWSTWTDDALGGSLG
Number of Associated Samples	113
Number of Associated Scaffolds	142

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	34.29 %
% of genes near scaffold ends (potentially truncated)	33.10 %
% of genes from short scaffolds (< 2000 bps)	87.32 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.577 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (36.620 % of family members)
Environment Ontology (ENVO)	Unclassified (38.732 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.704 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.19% β-sheet: 29.82% Coil/Unstructured: 42.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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SCOP family	SCOP domain	Representative PDB	TM-score
d.58.32.0: automated matches	d5fxda2	5fxd	0.79139
d.58.10.0: automated matches	d6krba_	6krb	0.78899
d.58.18.5: Glycine cleavage system transcriptional repressor	d1u8sa1	1u8s	0.77878
d.58.10.1: Acylphosphatase-like	d2vh7a_	2vh7	0.77474
d.58.32.1: Vanillyl-alcohol oxidase-like	d1wvfa1	1wvf	0.77248

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 142 Family Scaffolds
PF01425	Amidase	22.54
PF01641	SelR	8.45
PF12681	Glyoxalase_2	5.63
PF00903	Glyoxalase	4.23
PF06418	CTP_synth_N	2.82
PF01230	HIT	1.41
PF02128	Peptidase_M36	0.70
PF04389	Peptidase_M28	0.70
PF00491	Arginase	0.70

COG ID	Name	Functional Category	% Frequency in 142 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	22.54
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	8.45
COG0504	CTP synthase (UTP-ammonia lyase)	Nucleotide transport and metabolism [F]	2.82
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	0.70

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.58 %
Unclassified	root	N/A	20.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.58 %
Unclassified	root	N/A	20.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.58 %
Unclassified	root	N/A	20.42 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	48.59 %
Unclassified	root	N/A	20.42 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	42.96 %
Unclassified	root	N/A	20.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.42 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	18.31 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	7.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.42 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	7.04 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	5.63 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.11 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.11 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.42 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	7.04 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	5.63 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.11 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.41 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.42 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	5.63 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	4.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.11 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.41 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.42 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	5.63 %
unclassified Arthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter	4.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.11 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.41 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.42 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	5.63 %
Arthrobacter sp. B6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. B6	4.93 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.11 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.41 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.70 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908016\|OU_2_1_1_newblercontig16740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. B6	676	Open in IMG/M
2170459013\|GO6OHWN02J4DZS	Not Available	513	Open in IMG/M
3300000156\|NODE_c0260652	Not Available	531	Open in IMG/M
3300000956\|JGI10216J12902_105148200	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300000956\|JGI10216J12902_112068851	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300000956\|JGI10216J12902_127406499	All Organisms → cellular organisms → Bacteria → Terrabacteria group	561	Open in IMG/M
3300001431\|F14TB_104292835	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300001686\|C688J18823_10028882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	3782	Open in IMG/M
3300004157\|Ga0062590_100670643	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300005093\|Ga0062594_103293509	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300005329\|Ga0070683_100956240	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300005332\|Ga0066388_102532708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	933	Open in IMG/M
3300005332\|Ga0066388_104604795	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300005338\|Ga0068868_102026043	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300005353\|Ga0070669_101883732	All Organisms → cellular organisms → Bacteria → Terrabacteria group	522	Open in IMG/M
3300005355\|Ga0070671_101206920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	666	Open in IMG/M
3300005364\|Ga0070673_102007994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	549	Open in IMG/M
3300005366\|Ga0070659_101555052	Not Available	590	Open in IMG/M
3300005536\|Ga0070697_102049365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. B6	512	Open in IMG/M
3300005546\|Ga0070696_101035806	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300005547\|Ga0070693_100621797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	782	Open in IMG/M
3300005562\|Ga0058697_10051016	Not Available	1586	Open in IMG/M
3300005563\|Ga0068855_100797422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1004	Open in IMG/M
3300005564\|Ga0070664_101985568	All Organisms → cellular organisms → Bacteria → Terrabacteria group	552	Open in IMG/M
3300005614\|Ga0068856_100965390	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300005614\|Ga0068856_102034327	Not Available	584	Open in IMG/M
3300005614\|Ga0068856_102168107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300005844\|Ga0068862_102254682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	556	Open in IMG/M
3300005937\|Ga0081455_10013324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8135	Open in IMG/M
3300005983\|Ga0081540_1000964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	25975	Open in IMG/M
3300005985\|Ga0081539_10005383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13100	Open in IMG/M
3300006163\|Ga0070715_10209729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	995	Open in IMG/M
3300006844\|Ga0075428_101102850	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300006847\|Ga0075431_100682684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1005	Open in IMG/M
3300009098\|Ga0105245_11005346	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300009156\|Ga0111538_10594414	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300009174\|Ga0105241_12322017	Not Available	534	Open in IMG/M
3300009551\|Ga0105238_12177024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300009840\|Ga0126313_10118454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1968	Open in IMG/M
3300009840\|Ga0126313_10160841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1703	Open in IMG/M
3300010038\|Ga0126315_11081183	Not Available	541	Open in IMG/M
3300010041\|Ga0126312_10542170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	834	Open in IMG/M
3300010042\|Ga0126314_11261388	Not Available	553	Open in IMG/M
3300010044\|Ga0126310_11708031	Not Available	523	Open in IMG/M
3300010145\|Ga0126321_1362609	Not Available	941	Open in IMG/M
3300010362\|Ga0126377_10062494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3284	Open in IMG/M
3300010371\|Ga0134125_12766629	All Organisms → cellular organisms → Bacteria → Terrabacteria group	533	Open in IMG/M
3300010375\|Ga0105239_12160415	Not Available	647	Open in IMG/M
3300010397\|Ga0134124_11967591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	621	Open in IMG/M
3300012200\|Ga0137382_10357231	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300012201\|Ga0137365_10359280	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300012204\|Ga0137374_11025566	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300012355\|Ga0137369_10698488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	697	Open in IMG/M
3300012360\|Ga0137375_10563267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	956	Open in IMG/M
3300012360\|Ga0137375_10602536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	914	Open in IMG/M
3300012941\|Ga0162652_100086347	Not Available	550	Open in IMG/M
3300012957\|Ga0164303_11107462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. B6	572	Open in IMG/M
3300012986\|Ga0164304_11226979	Not Available	607	Open in IMG/M
3300012986\|Ga0164304_11432124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. B6	569	Open in IMG/M
3300013306\|Ga0163162_11753947	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300013307\|Ga0157372_10328399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1781	Open in IMG/M
3300013307\|Ga0157372_10883880	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300013307\|Ga0157372_11603099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	749	Open in IMG/M
3300015371\|Ga0132258_11468673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1722	Open in IMG/M
3300015373\|Ga0132257_102026702	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300015374\|Ga0132255_105559366	Not Available	533	Open in IMG/M
3300017792\|Ga0163161_12082281	Not Available	504	Open in IMG/M
3300018027\|Ga0184605_10350155	Not Available	667	Open in IMG/M
3300018051\|Ga0184620_10190330	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300018061\|Ga0184619_10486202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300018066\|Ga0184617_1001880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3193	Open in IMG/M
3300018066\|Ga0184617_1096433	Not Available	821	Open in IMG/M
3300018465\|Ga0190269_11618992	Not Available	541	Open in IMG/M
3300018466\|Ga0190268_11779033	All Organisms → cellular organisms → Bacteria → Terrabacteria group	554	Open in IMG/M
3300019269\|Ga0184644_1418231	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300019869\|Ga0193705_1010663	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2005	Open in IMG/M
3300021078\|Ga0210381_10094632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	962	Open in IMG/M
3300025905\|Ga0207685_10500518	All Organisms → cellular organisms → Bacteria → Terrabacteria group	639	Open in IMG/M
3300025927\|Ga0207687_10644275	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300025931\|Ga0207644_11375039	All Organisms → cellular organisms → Bacteria → Terrabacteria group	593	Open in IMG/M
3300025937\|Ga0207669_11712334	Not Available	537	Open in IMG/M
3300025981\|Ga0207640_10939768	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300026023\|Ga0207677_11066153	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300026075\|Ga0207708_11263089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	646	Open in IMG/M
3300026078\|Ga0207702_10050416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3515	Open in IMG/M
3300027718\|Ga0209795_10215903	Not Available	537	Open in IMG/M
3300028587\|Ga0247828_10815543	All Organisms → cellular organisms → Bacteria → Terrabacteria group	593	Open in IMG/M
3300028589\|Ga0247818_10503019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	826	Open in IMG/M
3300028596\|Ga0247821_10701614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	660	Open in IMG/M
3300028596\|Ga0247821_10839040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	608	Open in IMG/M
3300028596\|Ga0247821_11080367	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300028704\|Ga0307321_1025558	All Organisms → cellular organisms → Bacteria	1055	Open in IMG/M
3300028705\|Ga0307276_10001160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3568	Open in IMG/M
3300028707\|Ga0307291_1009484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	2107	Open in IMG/M
3300028708\|Ga0307295_10177518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	598	Open in IMG/M
3300028711\|Ga0307293_10175484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	682	Open in IMG/M
3300028711\|Ga0307293_10304687	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300028717\|Ga0307298_10066405	All Organisms → cellular organisms → Bacteria	1001	Open in IMG/M
3300028718\|Ga0307307_10259136	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300028720\|Ga0307317_10108442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	922	Open in IMG/M
3300028720\|Ga0307317_10108676	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300028721\|Ga0307315_10052089	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300028722\|Ga0307319_10234354	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300028722\|Ga0307319_10269183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. B6	562	Open in IMG/M
3300028744\|Ga0307318_10016422	All Organisms → cellular organisms → Bacteria	2375	Open in IMG/M
3300028744\|Ga0307318_10297442	Not Available	565	Open in IMG/M
3300028744\|Ga0307318_10304078	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300028755\|Ga0307316_10027852	Not Available	1832	Open in IMG/M
3300028768\|Ga0307280_10238575	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300028771\|Ga0307320_10020579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	2382	Open in IMG/M
3300028778\|Ga0307288_10260936	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300028793\|Ga0307299_10012839	All Organisms → cellular organisms → Bacteria	2966	Open in IMG/M
3300028793\|Ga0307299_10357150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300028796\|Ga0307287_10281318	Not Available	629	Open in IMG/M
3300028799\|Ga0307284_10157606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	878	Open in IMG/M
3300028803\|Ga0307281_10194099	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300028807\|Ga0307305_10219770	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300028807\|Ga0307305_10547658	Not Available	517	Open in IMG/M
3300028814\|Ga0307302_10609438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. B6	543	Open in IMG/M
3300028819\|Ga0307296_10719133	Not Available	545	Open in IMG/M
3300028824\|Ga0307310_10372554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	705	Open in IMG/M
3300028824\|Ga0307310_10376718	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300028828\|Ga0307312_10123992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	1621	Open in IMG/M
3300028828\|Ga0307312_10456650	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300028828\|Ga0307312_11208556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. B6	500	Open in IMG/M
3300028875\|Ga0307289_10098234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1194	Open in IMG/M
3300028875\|Ga0307289_10102580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1168	Open in IMG/M
3300028876\|Ga0307286_10255789	Not Available	642	Open in IMG/M
3300028881\|Ga0307277_10023202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2439	Open in IMG/M
3300028881\|Ga0307277_10070924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1446	Open in IMG/M
3300028881\|Ga0307277_10361123	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300028884\|Ga0307308_10115073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1283	Open in IMG/M
3300028884\|Ga0307308_10433048	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300031152\|Ga0307501_10182435	Not Available	590	Open in IMG/M
3300031164\|Ga0307502_10002447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4198	Open in IMG/M
3300031740\|Ga0307468_100881033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	774	Open in IMG/M
3300031901\|Ga0307406_10261341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1310	Open in IMG/M
3300032013\|Ga0310906_10567738	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300032159\|Ga0268251_10075776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	1155	Open in IMG/M
3300034384\|Ga0372946_0041103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2073	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.83%
Host-Associated	Host-Associated	27.46%
Engineered	Engineered	0.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.49%
Plants	Host-Associated → Plants	27.46%
Aquatic	Environmental → Aquatic	5.63%
Unclassified	Environmental → Unclassified	0.70%
Solid Waste	Engineered → Solid Waste	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.97%
Sediment	Environmental → Aquatic → Sediment	3.52%
Freshwater	Environmental → Aquatic → Freshwater	2.11%
Phylloplane	Host-Associated → Plants → Phylloplane	2.11%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.70%
Unclassified	Environmental → Unclassified → Unclassified	0.70%
Grass	Engineered → Solid Waste → Grass	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.04%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.45%
Loam	Environmental → Terrestrial → Soil → Loam	7.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.11%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	2.11%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.41%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.70%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.70%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified	0.70%
Composting	Engineered → Solid Waste → Grass → Composting	0.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.18%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.93%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.11%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	2.11%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.41%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.41%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.41%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.41%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.70%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.70%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified → Unclassified	0.70%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	36.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.23%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.23%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.23%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.11%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.11%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.11%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.11%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.11%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.11%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	2.11%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.41%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.41%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.41%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.41%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.41%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.70%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.70%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.70%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.70%
	Environmental → Unclassified → Unclassified → Unclassified → Unclassified →	0.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.70%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.70%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908016	Sample 642	Environmental	Open in IMG/M
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010145	Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031164	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 16_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OU_00912210	2124908016		VGLLRRAAFRREVQQVCVELGLGCEIDEHRRLLTARFRVLVRGSPEGVDALIDYARVQGWETWTDDALGAFG
N57_06194070	2170459013	Grass Soil	VDEDGALDDEVVTRELGFAVGLLRRATFRREVQQVCVELGLGCEIDERRRLLTTRVRVLVRGSREGVDALVDYARVSGWSMWIDDAMGGSLG
NODE_02606522	3300000156	Sugar Cane Bagasse Incubating Bioreactor	VRVDEEVLTHEVGFSVARRRRAAFVRELQQVCVELGLGCEMDEQRGLFKTEVRVLVRGSRSGIDALLDYARVSGWSTLNSDGSGGTFG*
JGI10216J12902_1051482002	3300000956	Soil	VVTRELGFTVGLLRRSSFRRELQQVCVELGLGCEIDERTRLLTTRVRVLVRGTRGGVDALVDYARVSGWSTWTNDTLGGSLG*
JGI10216J12902_1120688512	3300000956	Soil	VVTRELGFSVSLRQRAAFLREIQQVCVELGLGCEMDEQRRLLRSRVRVLVRGTCEGVDALLDYARISEWT
JGI10216J12902_1274064991	3300000956	Soil	VNDEVVTRELGFSVSRRRRTAFLREIQQVCVELGVGCEIDERRRLLSTSVRVLVRGSREGVDALRDYARISGWSISSDGAVG*
F14TB_1042928352	3300001431	Soil	VGDEVITRELGFSVGLLRRAAFRREVQQVCVELGLGCEIDEHRRLLTARXXXXXXGSPEGVDALIDYARVSGWSTWTDDALGSAFG*
C688J18823_100288822	3300001686	Soil	VHDQGGAGDEVITRELGFAVGLLRRTAFRRELQQVCVELGLGCDIDERTRLLTTRLRVLVRGTREGVDALVEYARVSGWSTWGDDALGGSLG*
Ga0062590_1006706432	3300004157	Soil	VHDEDAVDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDARTRLLTTHVTVLVRGTREGVDALVDYARVSGWSTWTDDAVGGSLG*
Ga0062594_1032935092	3300005093	Soil	VGEEVITRELGFSVGLLRRAAFRRELQQVCVELGLGCEIDEHRRLLTARLRVLVRGSQEGVDALIDYARVQGWETWTDDALGAFG*
Ga0070683_1009562401	3300005329	Corn Rhizosphere	LRFAVGMRRRTAVRRELQQVCVELGLGCEIDERRRLLTARMHVLVRGSPAGVDALIDYARVSGWTARTDDPLGASLG*
Ga0066388_1025327082	3300005332	Tropical Forest Soil	VGDEVITRELGFSVGLLRRAAFRRELQQVCVELGLGCEIDEHRRLLTARFHVLVRGSQEGVDALIDYARVQGWETWTDDALGAFG*
Ga0066388_1046047952	3300005332	Tropical Forest Soil	VNDEVVTRELGFSVSRRRRTAFLREIQQVCVELGVGCEIDERRRLLSTSVRVLVRGSREGVDALRDYARISGWSMSSDGAVG*
Ga0068868_1020260432	3300005338	Miscanthus Rhizosphere	VHDEEAVDDEVVTRELSFAVGLLRRTTFRRELQQVCVELGLGCEIDARTRLLTTHVTVLVRGTREGVDALVDYARVSGWSTSPDDALGGSLG*
Ga0070669_1018837322	3300005353	Switchgrass Rhizosphere	VHDEEAVDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDARTRLLTTHVTVLVRGTREGVDALVDYARVSGWSTSPDDALGGSLG*
Ga0070671_1012069201	3300005355	Switchgrass Rhizosphere	VHDEEAVDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDERTRLLTTRVTVLVRGTREGVDALVDYARVSGWSTWTDDALGGSLG*
Ga0070673_1020079942	3300005364	Switchgrass Rhizosphere	VVTRELRFAVGMRRRTAVRRELQQVCVELGLGCEIDERRRLLTARMHVLVRGSPAGVDALIDYARVSGWT
Ga0070659_1015550521	3300005366	Corn Rhizosphere	VVTRELRFAVGMRRRTAVRRELQQVCVELGLGCEIDERRRLLTARMHVLVRGSPAGVDALIDYARVSGWTARTDDPLGASLG*
Ga0070697_1020493652	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ITRELGFSVGLLRRAAFRRELQQVCVELGLGCEIDEHRRLLTARLRVLVRGSQEGVDALIDYARVQGWETWTDDALGAFG*
Ga0070696_1010358061	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VHDEEAVDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDARTRLLTTHVTVLVRGTREGVDALVDYARVSGW
Ga0070693_1006217972	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VGEEVITRELGFSVGLLRRAAFRRELQQLCVELGLGCEIDEYRRLLTARLRVLVRGSQEGVDALIDYARVQGWETWTDDALGAFG*
Ga0058697_100510163	3300005562	Agave	VGDEVITRELGFSVGLLRRAAFRREVQQVCVELGLGCEIDEHRRLLTVRFRVLVRGSPEGVDALIDYARVSGWSTWTDDALGSAFG*
Ga0068855_1007974221	3300005563	Corn Rhizosphere	VHDEDAVDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDARTRLLTTHVTVLVRGTREGVDALVDYARVSGWS
Ga0070664_1019855681	3300005564	Corn Rhizosphere	VHEHGAVDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDERTRLLTTRVTVLVRGTREGVDALVDYARVSGWSTWTDDALGGSVG*
Ga0068856_1009653902	3300005614	Corn Rhizosphere	VHDEEAVDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDERTRLLTTRVTVLVRGTREGVDALVDYARVSGWSTWTDDALGGSVG*
Ga0068856_1020343272	3300005614	Corn Rhizosphere	FPGSPPTIGAVDDEVVTRELRFAVGMRRRTAVRRELQQVCVELGLGCEIDERRRLLTARMHVLVRGSPAGVDALIDYARVSGWTARTDDPLGASLG*
Ga0068856_1021681071	3300005614	Corn Rhizosphere	ELGFAVAVRHRATFRREVQQVCVELGLGCEIDEHRRLLTTRLRVLVRGTREGVDALVDYARVSGWSTWTDDGLDPAVTRG*
Ga0068862_1022546821	3300005844	Switchgrass Rhizosphere	VLDGEQAREDEVITRELGFAVGLLRRSAFRRELQQVCVELGLGCEIDESRRLLSTRLRVLVRGTREGVDALVDYARVSGWSTWSDDALDGSLG*
Ga0081455_1001332410	3300005937	Tabebuia Heterophylla Rhizosphere	VDEEVLTRELGFSVARRRRAAFVRELQQVCVELGLGCEMDEQRGLFKTTVRVLVRGSRSGIDALLDYARVSGWSTVNSDGPGGTFG*
Ga0081540_100096416	3300005983	Tabebuia Heterophylla Rhizosphere	VITRELGFSVGLLRRAAFRRELQQVCVELGLGCEIDEHRRLLTARFRVLVRGSQEGVDALIDYARVQGWETWTDDALGAFG*
Ga0081539_100053834	3300005985	Tabebuia Heterophylla Rhizosphere	VGDEVITRELGFSVGLLRRAAFRREVQQVCVELGLGCEIDEHRRLLTARFRVLVRGSEEGVDALIDYARVQGWQTWTDDALGAFG*
Ga0070715_102097292	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VHDEEAVDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDEHTRLLTTRVTVLVRGTREGVDALVDYARVSGWSTWTDDALGGSVG*
Ga0075428_1011028502	3300006844	Populus Rhizosphere	VGEEVITRELGFSVGLLRRGAFRRELQQVCVELGLGCEIDEHRRLLTARFRVLVRGSQEGVDALIDYARVQGWETWTDDALGAFG*
Ga0075431_1006826841	3300006847	Populus Rhizosphere	VGEEVITRELGFSVGLLHRGAFRRELQQVCVELGLGCEIDEHRRLLTARFRVLVRGSQEGVDALIDYARVQGWETWTDDALGAFG*
Ga0105245_110053461	3300009098	Miscanthus Rhizosphere	VDDEVVTRELRFAVGMRRRTAVRRELQQVCVELGLGCEIDERRRLLTARMHVLVRGSPAGVDALIDYARVSGWTARTDDPLGASLG*
Ga0111538_105944143	3300009156	Populus Rhizosphere	VGEEVITRELGFSVGLLHRGAFSRELQQVCVELGLGCEIDEHRRLLTARFRVLVRGSQEGVDALIDYARVQGWETWTDDALGAFG*
Ga0105241_123220171	3300009174	Corn Rhizosphere	VDDEVVTRELGFVVGLRGRATFRREVQQVCVELGLGCEIDERRRLLTARMHVLVRGSPAGVDALIDYARVSGWTARTDDALGASLG*
Ga0105238_121770242	3300009551	Corn Rhizosphere	VDDEVVTRELGFVVGLRGRATFRREVQQVCVELGLGCEIDEHRRLLTTRMRVLVRGTREGVDALVDYARVSGWATWTDNALDGSPG*
Ga0126313_101184542	3300009840	Serpentine Soil	VHDDGAVEDEVVTRELGFAVGVLRRSAFRRELQQVCVELGLGCEIDERTRLLTTRVRVLVRGTREGVDALIAYARVSGWSTWTDDALGGTPG*
Ga0126313_101608412	3300009840	Serpentine Soil	VNDEVVTRELGFSVGLLRRAAFRRELQQVCVELGLGCEIDEHRRLLTARFRVLVRGSPEGVDALIDYARVSGWSTWTDDALGSAFG*
Ga0126315_110811832	3300010038	Serpentine Soil	VGDEVITRELGFSVGLLRRAAFRREVQQVCVELGLGCEIDEQRRLLTARFRVLVRGSTEGVDALIDYARVIEPLIQARGAVAP*
Ga0126312_105421701	3300010041	Serpentine Soil	LPWRLGFAVGVLRRSAFRRELQQVCVELGLGCEIDERTRLLTTRVRVLVRGTREGVDALIAYARVSGWSTWTDDALGGTPG*
Ga0126314_112613881	3300010042	Serpentine Soil	VGDEVITRELGFSVGLLRRSAFRREVQQVCVELGLGCEIDEHRRLLTARFRVLVRGSPEGVDALIDYARVSGWSTWTDDALGSAFG*
Ga0126310_117080312	3300010044	Serpentine Soil	SAPTIGAVHDESAVDDEVVTRELGFAVGRLRRTAFRRELQQVCVELGLGCEIDEHTRLLTTRVRVLVRGTREGVDALVDYARVSGWSTWSDDGLGGSLG*
Ga0126321_13626091	3300010145	Soil	VGDEVITRELGFSVGLLRRTAFRREVQQVCVELGLGCEIDEHRRLLTVRFRVLVRGSPEGVDALIDYARVSGWSTWTDDALGSAFG*
Ga0126377_100624942	3300010362	Tropical Forest Soil	VDEEVLTRELGFSVARRRRGAFVRELQQVCVELGLGCEMDERRGLFKTHVRVLVRGSRADIDALLDYARVSGWSTVNNDGAGSAFG*
Ga0134125_127666291	3300010371	Terrestrial Soil	VHDEEAVDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDARTRLLTTHVTVLVRGTREGVDALVDYARVSGWSTWTDDALGGSVG*
Ga0105239_121604152	3300010375	Corn Rhizosphere	VDDEVVTRELGFAVGVRHRATFRREVQQVCVELGLGCEIDEHRRLLTTRMRVLVRGTREGVDALVDYARVSGWTTWTDDGLDRAGTQG*
Ga0134124_119675911	3300010397	Terrestrial Soil	VHDEEAVDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDERTRLLNTRVTVLVRGTRESVDALVDYARVSGWSTWTDDALG*
Ga0137382_103572311	3300012200	Vadose Zone Soil	VHDEGRVDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDERTRLLTTRVRVLVRGTREGVDALVDYARVSGWSTWADDALGGSPG
Ga0137365_103592802	3300012201	Vadose Zone Soil	VDDEVVTRELGFSVGLLRRVAFRREIQQVCVELGLGCEIDERRRLLTTRVRVLVRGSPEGVEALVDYAGVSGWSTWTDDALGGALG*
Ga0137374_110255661	3300012204	Vadose Zone Soil	VGDEVITRELGFSVGLLRRAAFRREVQQVCVELGLGCEIDEHRRLLTARFRVLVRGSTEGVDALIDYARVSGWSTWTD
Ga0137369_106984882	3300012355	Vadose Zone Soil	TRERGFSVGLLRRAAFRREVQQVCVELGLGCEIDEHRRFLTARFRVLVRGTAEGVDALIDYARVSGWSTWTDDALGNAFG*
Ga0137375_105632672	3300012360	Vadose Zone Soil	VHDDGAVDDEVVTRELGFAVSLLRRSTFRRELQQVCVELGLGCEIDERTRLLTTRVRVLVRGTREGVDALVAYARVSGWSTWTDDALGGTPG*
Ga0137375_106025362	3300012360	Vadose Zone Soil	VGDEVITRELGFSVGLLRRAAFRREVQQVCVELGLGCEIDEHRRFLTARFRVLVRGTAEGVDALIDYARVSGWSTWTDDALGNAFG*
Ga0162652_1000863471	3300012941	Soil	VGDEVITRELGFSVGLMRRAAFRREVQQVCVELGLGCEIDEHRRLLTARFRVLVRGSPEGVDALIDYARVSGWSTWTDDALGSAFG*
Ga0164303_111074621	3300012957	Soil	IEAVHDERAIDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDERTRLLTTRVRVLVRGTRDGVEALVDYARVSGWTTWSDDALGTSPG*
Ga0164304_112269792	3300012986	Soil	VDDEVVTRELGFAIGLRRRATFRREVQQVCVELGLGCEIDEHRRLLTTRMRVLVRGTREGVDALVDYARVSGWSTWTDNALDGSPG*
Ga0164304_114321241	3300012986	Soil	LGFAVGLLRRTTFRRELQQVCVELGLGCEIDARTRLLTTHVTVLVRGTRAGVDALVDYARVSGWSTWTDDALGGSVG*
Ga0163162_117539472	3300013306	Switchgrass Rhizosphere	VHDEEAVDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDARTRLLTTHVTVLVRGTREGVDALVDYARVSGWSTWTDDAVGGSLG*
Ga0157372_103283992	3300013307	Corn Rhizosphere	VHDEEAVDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDARTRLLTTHVTVLVRGTREGVDALVDYARVSGWSTWTDDAVGRSLG*
Ga0157372_108838801	3300013307	Corn Rhizosphere	VDDEVVTREPRFAVGMRRRTAVRRELQQVCVELGLGCEIDERRRLLTARMHVLVRGSPAGVDALIDYARVSGWTARTDDPLGASLG*
Ga0157372_116030992	3300013307	Corn Rhizosphere	VDDEVVTRELGFAVGVRRRATFRREVQQVCVELGLGCEIDEHRRLLTTRMRVLVRGTREGVDALVDYARVSGWSTWTDDGLDPVGTQG*
Ga0132258_114686734	3300015371	Arabidopsis Rhizosphere	LDGKQAREDEVITRELGFAVGLLRRSAFRRELQQVCVELGLGCEIDESRRLLSTRLRVLVRGTREGVDALVDYARVSGWATWSDEALDGSLG*
Ga0132257_1020267022	3300015373	Arabidopsis Rhizosphere	LDGEQAREDEVIPRELGFAVGLLRRSAFRRELQQVCVELGLGCEIDERRRLLSTRLRVLVRGTREGVDALVDYARVSGWATWSDEALDGSLG*
Ga0132255_1055593662	3300015374	Arabidopsis Rhizosphere	LDGEQAREDEVITRELGFAVGLLRRSAFRRELQQVCVELGLGCEIDESRRLLSTRLRVLVRGTREGVDALVDYARVSGWATWSDDALDGSLG*
Ga0163161_120822811	3300017792	Switchgrass Rhizosphere	GFAVGLLRRTTFRRELQQVCVELGLGCEIDARTRRLTTHVTVLVRGTREGVDALVDYARVSGWSTSPDDALGGSLG
Ga0184605_103501552	3300018027	Groundwater Sediment	VGDEVITRELGFSVGLMRRAAFRREVQQVCVELGLGCEIDEHRRLLTARFRVLVRGSAEGVDALIDYARVSGWSTWTDDALGSAFG
Ga0184620_101903301	3300018051	Groundwater Sediment	VGDEVITRELGFSVGLMRRAAFRREVQQVCVELGLGCEIDEHRRLLTARFRVLVRGSPEGVDALIDYARVSGWSTWSDDALGSAFG
Ga0184619_104862021	3300018061	Groundwater Sediment	VDEDGALDDEVVTRELGFAVGLLRRATFRREVQQVCVELGLGCEIDERRRLLTTRVRVLVRGSREGVDALVDYARVSGWSMWIDDAMG
Ga0184617_10018802	3300018066	Groundwater Sediment	VHDEEAVHDEGAVHDEVVTREFGFTVGLLRRTTFRRELQQVCVELGLGCEIDERTRLLTTRVRVLVRGTREGVDALVDYARVSGWSIWADDALGRSPG
Ga0184617_10964331	3300018066	Groundwater Sediment	DEVVTRELGFEVSLLRREAFRREIQQVCVELGLGCEIDDHRRLLTARFRVLVRGSREGIDALIDYARVSGWSTWSDSTLDSAFG
Ga0190269_116189921	3300018465	Soil	DEVVTRELGFSVGLTRRAAFRREVQQVCVELGLGCEIDEQRRLLTTRVRVLVRGSREGVDALVDYARVSGWSTWTDDALGSAFG
Ga0190268_117790332	3300018466	Soil	VHDEGAVHDEGAVHDEVVTRELGFTVGLLRRTTFRRELQQVCVELGLGCDIDQRTRLLTTRVSVLVRGTRESVDALLDYARVSGWSTWSDDAPGGSQG
Ga0184644_14182311	3300019269	Groundwater Sediment	VGDEVITRELGFSVGLMRRAAFRREVQQVCVELGLGCEIDEHRRLLTARFRVLVRGSPEGVDALIDYAHVSGWSTWTDDALGSAFG
Ga0193705_10106633	3300019869	Soil	VHDEGAVHDEGAVHDEVVTRELGFTVGLLRRTTFRRELQQVCVELGLGCEIDEHTRLLTTRVRVLVRGTREGVDALVDYARVSGWSIWADDALGHSLG
Ga0210381_100946322	3300021078	Groundwater Sediment	VHDEGAVHDEGAVHDEGAVHDEVVTRELGFTVGLLRRTTFRRELQQVCVELGLGCEIDEHTRLLTTRVRVLVRGTREGVDALVDYARVSGWSIWADDALGRSPG
Ga0207685_105005182	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VHDEEAVDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDEHTRLLTTRVTVLVRGTREGVDALVDYARVSGWSTWTDDALGGSVG
Ga0207687_106442752	3300025927	Miscanthus Rhizosphere	VGEEVITRELGFSVGLLRRAAFRRELQQVCVELGLGCEIDEHRRLLTARLRVLVRGSQEGVDALIDYARVQGWETWTDDALGAFG
Ga0207644_113750391	3300025931	Switchgrass Rhizosphere	VHDEEAVDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDERTRLLTTRVTVLVRGTREGVDALVDYARVSGWSTWTDDALGGSVS
Ga0207669_117123342	3300025937	Miscanthus Rhizosphere	VHDEEAVDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDERTRLLTTRVTVLVRGTREGVDALVDYARVSGWSTWTDDALGGSVG
Ga0207640_109397682	3300025981	Corn Rhizosphere	VHDEEAVDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDERTRLLTTRVTVLVRGTREGVDALVDYARVSGWSTWT
Ga0207677_110661532	3300026023	Miscanthus Rhizosphere	VVTRELRFAVGMRRRTAVRRELQQVCVELGLGCEIDERRRLLTARMHVLVRGSPAGVEALIDYARVSGWTARTDDALGASLG
Ga0207708_112630892	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VHDEEAVDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDERRRLLTARMHVLVRGSPAGVDALIDYARVSGWTARTDDPLGASLG
Ga0207702_100504162	3300026078	Corn Rhizosphere	VVTRELRFAVGMRRRTAVRRELQQVCVELGLGCEIDERRRLLTARMHVLVRGSPAGVDALIDYARVSGWTARTDDPLGASLG
Ga0209795_102159031	3300027718	Agave	VGDEVITRELGFSVGLLRRAAFRREVQQVCVELGLGCEIDEHRRLLTARFRVLVRGTAEGVDALIDYARVQGWETWTDDALGAFG
Ga0247828_108155432	3300028587	Soil	VLDGEQAREGEVITRELAVGLLRRSAFRRELQQVCVELGLGCEIDESRRLLSTRLRVLVRGTREGVDALVDYARVSGWATWSDDALDGSLG
Ga0247818_105030192	3300028589	Soil	VLDGEQAREDEVITRELGFAVGLLRRSAFRHELQQVCVELGLGCEIDESRRLLSTRLRVLVRGTREGVDALVDYARVSGWATWSDDALDGSLG
Ga0247821_107016142	3300028596	Soil	VHDEEAVDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDARTRLLTTHVTVLVRGTREGVDALVDYARVSGWSTSPDDALGGSLG
Ga0247821_108390401	3300028596	Soil	VLDGEQAREGEVITRELGFAVGLMRRSAFRRELQQVCVELGLGCEIDESRRLLSTRLRVLVRGTREGVDALVDYARVSGWATWSVDALD
Ga0247821_110803672	3300028596	Soil	VGEEVITRELGFSVGLLRRAAFRRELQQVCVELGLGCEIDEHRRLLTARLRVLVRGSQEGVDALIDYARVQGWETWTDDALGA
Ga0307321_10255581	3300028704	Soil	HDEGAVHDEVVTRELGFTVGLLRRTTFRRELQQVCVELGLGCEIDEHTRLLTTRVRVLVRGTREGVDALVDYARVSGWSIWADDALGHSLG
Ga0307276_100011603	3300028705	Soil	VVTREFGFTVGLLRRTTFRRELQQVCVELGLGCEIDEHTRLLTTRVRVLVRGTREGVDALVDYARVSGWSIWADDALGRSPG
Ga0307291_10094842	3300028707	Soil	VVTREFGFTVGLLRRTTFRRELQQVCVELGLGCEIDEHTRLLTTRVRVLVRGTREGVDALVDYARVSGWSIWADDALGHSLG
Ga0307295_101775181	3300028708	Soil	VVTRELGFTVGLLRRTTFRRELQQVCVELGLGCEIDEHTRLLTTRVRVLVRGTREGVDALVDYARVSGWSIWADDALGHSLG
Ga0307293_101754842	3300028711	Soil	VDDDGAPVDEVVTRELGFAVGLLRGATFRREVQQVCVELGLGCEIDERRRLLTTRVRVLVRGSREGVDALVDYARVSGWSMWIDDAMGGSLG
Ga0307293_103046872	3300028711	Soil	VGDEVITRELGFSAGLMRRAAFRREVQQVCVELGLGCEIDEHRRLLTARFRVLVRGSPEGVDALIDYARVSGWSTWTDDALGSA
Ga0307298_100664051	3300028717	Soil	VHDEVVTRELGFTVGLLRRTTFRRELQQVCVELGLGCEIDEHTRLLTTRVRVLVRGTREGVDALVDYARVSGWSIWADDALGHSLG
Ga0307307_102591362	3300028718	Soil	ITRELGFAVGLMRRTAFRRELQQVCVELGLGCDIDERTRLVTTRLRVLVRGTREGVDALVEYARVSGWSTWGDDAVGGSLS
Ga0307317_101084422	3300028720	Soil	EFGFTVGLLRRTTFRRELQQVCVELGLGCEIDEHTRLLTTRVRVLVRGTREGVDALVDYARVSGWSIWADDALGRSPG
Ga0307317_101086762	3300028720	Soil	LGFSVGLMRRAAFRREVQQVCVELGLGCEIDEHRRLLTARFRVLVRGSPEGVDALIDYARVSGWSTWTDDALGSAFG
Ga0307315_100520891	3300028721	Soil	VTRELGFTVGLLRRTTFRRELQQVCVELGLGCEIDEHTRLLTTRVRVLVRGTRAGVDALVDYARVSGWSIWADDALGHSLG
Ga0307319_102343541	3300028722	Soil	VVTRELGFAVGVLRRGTVRREVQQVCVELGLGCEIDEHRRLLTTRMSVLVRGSPEGVNALVDYARVSGWSTWI
Ga0307319_102691831	3300028722	Soil	LAASPPTIGAVDDEVVTRELGFAVGVLRRGPFRREVQQVCVELGLGCEIDEHRRLLTTRMSVLVRGSPEGVNALVDYARVSGWSTWIDDAMGSSLG
Ga0307318_100164224	3300028744	Soil	VVTREFGFTVGLLRRTTFRRELQQVCVELGLGCEIDEHTRLLTTRVRVLVRGTREGVDALVDYARVSGWSIWADDPLGRSP
Ga0307318_102974421	3300028744	Soil	VNDEVVTRELGFEVSLLRREAFRREIQQVCVELGLGCEIDDHRRLLSARFRVLVRGSREGIDALIDYARVSGWSTWSDSTLDSAFG
Ga0307318_103040782	3300028744	Soil	DDEVVTRELGFAVGVLRRGTFRREVQQVCVELGLGCEIDEHRRLLTTRMSVLVRGSPEGVNALVDYARVSGWSTWIDDAMGSSLG
Ga0307316_100278521	3300028755	Soil	VHDEGAVHDEGAVHDEVVTREFGFTVGLLRRTTFRRELQQVCVELGLGCEIDEHTRLLTTRVRVLVRGTREGVDALVDYARVSGWSIWADDALGRSPG
Ga0307280_102385751	3300028768	Soil	VVTRELGFAVGLLRRATFRREVQQVCVELGLGCEIDERRRLLTTRVRVLVRGSREGVDALVDYARVSGWSMWIDDAMGGSLG
Ga0307320_100205793	3300028771	Soil	VVTRELGFAVGVLRRGTFRREVQQVCVELGLGCEIDEHRRLLTTRMSVLVRGSPEGVNALVDYARVSGWSTWIDDAMGSSLG
Ga0307288_102609362	3300028778	Soil	DEVVTRELGFTVGLLRRTTFRRELQQVCVELGLGCEIDEHTRLLTTRVRVLVRGTREGVDALVDYARVSGWSIWADDALGHSLG
Ga0307299_100128393	3300028793	Soil	VHDEGAVHDEGAVHDEVVTRELGFTVGLLRRTTFRRELQQVCVELGLGCEIDEHTRLLTTRVRVLVRGTREGVDALVDYARVSGWSIWADDALGRSPG
Ga0307299_103571501	3300028793	Soil	VGDEVITRELGFSVGLMRRAAFRREVQQVCVELGLGCEIDERRRLLTTRVLVLVRGSREGVDALVDYARVSGWSMWIDDAMGGS
Ga0307287_102813182	3300028796	Soil	VDDDGASADEVVTRELGFAVGVLRRATFRREVQQVCVELGLGCEIDERRRLLTTRVLVLVRGSREGVDALVDYARVSGWSIWIDDAMGGSLG
Ga0307284_101576062	3300028799	Soil	VHDEGAVHDEVVTREFGFTVGLLRRTTFRRELQQVCVELGLGCEIDEHTRLLTTRVRVLVRGTREGVDALVDYARVSGWSIWADDALGRSPG
Ga0307284_103859701	3300028799	Soil	VGDEVITRELGFSVGLLRRAAFRREVQQVCVELGLGCEIDEHRRLLTARFRVLVRGSSEGVAALIDYAR
Ga0307281_101940991	3300028803	Soil	VDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDERRRLLTTRVRVRVLVRGSREGVDALVDYARVSGWSTWTDDALGGSLGSR
Ga0307305_102197701	3300028807	Soil	VVTRELGFAVRWLRRSSFRREVQQVCVELGLGCEIDQRRRLLTTRVRVLVRGSREGVDALVDYARVSGWSTWTDDALGGSLG
Ga0307305_105476581	3300028807	Soil	VVTRELGFAVGLLRRATFRREVQQVCVELGLGCEIDERRRLLTTRLRVLVRGSREGVDALVDYARVSGWSTWTDDALGGSVG
Ga0307302_106094381	3300028814	Soil	DDEVVTRELGFAVGSLRRATFRREVQQVCVELGLGCEIDERRRLLTTRVRVLVRGSREGVDALVDYARVSGWSIWIDDAMGGSLG
Ga0307296_107191332	3300028819	Soil	VDDDGAPADEVVTRELGFAVGVLRRATFRREVQQVCVELGLGCEIDERRRLLTTRVLVLVRGSREGVDALVDYARVSGWSMWIDDAMGGSLG
Ga0307310_103725542	3300028824	Soil	VDDEIVTRELGFSVGLLRRASFRREVQQVCVELGLGCEIDEHRRLLTARLRVLVRGSREGVDALIDYARVSGWSTWTDDALGSAFG
Ga0307310_103767182	3300028824	Soil	VVTRELGFAVGLLRRATFRREVQQVCVELGLGCEIDERRRLLTTRLRVLVRGSREGVDALVDYARVSGWSTWTDDALGG
Ga0307310_104256361	3300028824	Soil	AGAAPTIAAVHDEGAVHDEGAVHDEVVTRELGFTVGLLRRTTFRRELQQVCVELGLGCEIDEHTRLLTTRVRVLVRGTREGVDALVDYARVSGWSIWADDALGHSLG
Ga0307312_101239921	3300028828	Soil	VTREFGFTVGLLRRTTFRRELQQVCVELGLGCEIDEHTRLLTTRVRVLVRGTREGVDALVDYARVSGWSIWADDALGHSLG
Ga0307312_104566501	3300028828	Soil	VGDEVITRELGFSVGFLRREAFRREIQQVCVELGLGCEIDDHRRWLTARFSVLVRGTREGIDALIDYARVSGWSTWTDDALGSAFS
Ga0307312_112085562	3300028828	Soil	LPTIGAVDDEVVTRELGFAVGSLRRTTFRREVQQVCVELGLGCEIDERRRLLTTRVRVLVRGSREGVDALVDYARVSGWSTWTDDALGGSLG
Ga0307289_100982342	3300028875	Soil	VHDEGALDDEVVTREFGFAVGLLHRTTFRRELQQVCVELGLGCEIDERTRLLTTRVTVLVRGTRGGVDALVDYARVSGWSTWADDALGGSPG
Ga0307289_101025802	3300028875	Soil	VVTRELGFAVGLLRRATFRREVQQVCVELGLGCEIDERRRLLTTRVRVLVRGSREGVDALVDYARVSGWSTWTDDALGGSLG
Ga0307286_102557891	3300028876	Soil	GALDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDERTRLLTTRVTVLVRGTREGVDALVDYARVSGWATWADDALDGSLG
Ga0307277_100232022	3300028881	Soil	VGDEVITRELGFSVGLLRRAAFRREVQQVCVELGLGCEIDEHRRLLTARFRVLVRGSSEGVAALIDYARVSGWSTWTDDALGSAFG
Ga0307277_100709242	3300028881	Soil	VVTRELGFAVGSLRRTTFRREVQQVCVELGLGCEIDERRRLLTTRVRVLVRGSREGVDALVDYARVSGWSTWTDDALGGSLG
Ga0307277_103611232	3300028881	Soil	VGDEVITRELGFSAGLMRRAAFRREVQQVCVELGLGCEIDEHRRLLTARFRVLVRGSPQGVDALIDYARVSGWSTWTDDALGSAFG
Ga0307308_101150731	3300028884	Soil	GGRIAVVHDEGAVHDEGAVHDEVVTREFGFTVGLLRRTTFRRELQQVCVELGLGCEIDEHTRLLTTRVRVLVRGTREGVDALVDYARVSGWSIWADDALGRSPG
Ga0307308_104330481	3300028884	Soil	VDDEVVTRELGFAVGLLRRATFRREVQQVCVELGLGCEIDERRRLLTKRVRVLVRGSREGVDALVDYARVSGWSTWSDDALGSSLG
Ga0307501_101824352	3300031152	Soil	VHDEGEVDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDVHTRLLTTRVRVLVRGTREGVDALVDYARVSGWSTWADDAPGGSVG
Ga0307502_100024474	3300031164	Soil	VVTRELGFAVGWLGRATFRREVQQVCVELGLGCEIDERRRLLTTRVRVLVRGSREGVDALVDYARVSGWSTWTDDALGGSLG
Ga0307468_1008810332	3300031740	Hardwood Forest Soil	VLDGEQAREGEVITRELGFAVGLMRRSAFRRELQQVCVELGLGCEIDESRRLLSTRLRVLVRGTREGVDALVDYARVSGWATWSDDALDGSLG
Ga0307406_102613413	3300031901	Rhizosphere	VGDEVITRELGFSVGLLRRSAFRREVQQVCVELGLGCEIDEHRRLLTARFRVLVRGSPEGVDALIDYARVSGWSTWTDDALGSAFG
Ga0310906_105677381	3300032013	Soil	VHDEEAVDDEVVTRELGFAVGLLRRTTFRRELQQVCVELGLGCEIDARTRLLTTHVTVLVRGTRAGVDALVDYARVSGWSTSTDDALGGSLG
Ga0268251_100757762	3300032159	Agave	VGDEVITRELGFSVGLLRRAAFRREVQQVCVELGLGCEIDEHRRLLTVRFRVLVRGSPEGVDALIDYARVSGWSTWTDDALGSAFG
Ga0372946_0041103_364_624	3300034384	Soil	VDDEVVTRELGFAVGVLRRATFRREVQQVCVELGLGCEIDERRRLLTTRVRVLVRGSREGVDALVDYARVSGWSTWTDDALGGSLG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F052911

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences