Metagenome Family F053093

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053093
Family Type	Metagenome
Number of Sequences	141
Average Sequence Length	38 residues
Representative Sequence	LIQAADGDARALSVEFLRCGQPDPAVAAGDKDILVR
Number of Associated Samples	80
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.71 %
% of genes near scaffold ends (potentially truncated)	99.29 %
% of genes from short scaffolds (< 2000 bps)	92.20 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.454 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (41.135 % of family members)
Environment Ontology (ENVO)	Unclassified (39.007 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.482 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.06% β-sheet: 0.00% Coil/Unstructured: 60.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF00440	TetR_N	10.64
PF02082	Rrf2	7.09
PF07883	Cupin_2	5.67
PF13561	adh_short_C2	2.84
PF16576	HlyD_D23	2.13
PF13460	NAD_binding_10	2.13
PF14588	YjgF_endoribonc	2.13
PF16925	TetR_C_13	2.13
PF14534	DUF4440	1.42
PF08240	ADH_N	1.42
PF07690	MFS_1	1.42
PF01206	TusA	1.42
PF00106	adh_short	0.71
PF01152	Bac_globin	0.71
PF00873	ACR_tran	0.71
PF05368	NmrA	0.71
PF00108	Thiolase_N	0.71
PF07228	SpoIIE	0.71
PF00107	ADH_zinc_N	0.71
PF00903	Glyoxalase	0.71
PF13545	HTH_Crp_2	0.71
PF00486	Trans_reg_C	0.71
PF13565	HTH_32	0.71
PF13701	DDE_Tnp_1_4	0.71
PF02566	OsmC	0.71
PF14552	Tautomerase_2	0.71
PF02803	Thiolase_C	0.71
PF14497	GST_C_3	0.71
PF10011	DUF2254	0.71
PF02321	OEP	0.71
PF07638	Sigma70_ECF	0.71
PF00753	Lactamase_B	0.71
PF12840	HTH_20	0.71
PF12704	MacB_PCD	0.71
PF01548	DEDD_Tnp_IS110	0.71
PF12697	Abhydrolase_6	0.71
PF00857	Isochorismatase	0.71
PF13437	HlyD_3	0.71
PF11994	DUF3489	0.71
PF01047	MarR	0.71
PF12867	DinB_2	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG0640	DNA-binding transcriptional regulator, ArsR family	Transcription [K]	7.09
COG1414	DNA-binding transcriptional regulator, IclR family	Transcription [K]	7.09
COG1725	DNA-binding transcriptional regulator YhcF, GntR family	Transcription [K]	7.09
COG1959	DNA-binding transcriptional regulator, IscR family	Transcription [K]	7.09
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	7.09
COG2188	DNA-binding transcriptional regulator, GntR family	Transcription [K]	7.09
COG2378	Predicted DNA-binding transcriptional regulator YobV, contains HTH and WYL domains	Transcription [K]	7.09
COG2524	Predicted transcriptional regulator, contains C-terminal CBS domains	Transcription [K]	7.09
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	1.42
COG0425	Sulfur carrier protein TusA (tRNA thiolation, molybdenum cofactor biosynthesis)	Translation, ribosomal structure and biogenesis [J]	1.42
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.42
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.71
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.71
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.71
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.71
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.71
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.71
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.45 %
Unclassified	root	N/A	3.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.45 %
Unclassified	root	N/A	3.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.45 %
Unclassified	root	N/A	3.55 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.08 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	9.93 %
Unclassified	root	N/A	3.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.84 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.71 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	9.22 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.09 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.55 %
Unclassified	root	N/A	3.55 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.84 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.13 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.13 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.13 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.71 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	9.22 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.38 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	3.55 %
Unclassified	root	N/A	3.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.84 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.42 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.42 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.71 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.71 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	8.51 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.26 %
Yersiniaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae	3.55 %
Unclassified	root	N/A	3.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.84 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.71 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.71 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.71 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.71 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.71 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8.51 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.26 %
Serratia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia	3.55 %
Unclassified	root	N/A	3.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.84 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.71 %
Acidicapsa	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa	0.71 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.71 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.71 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.71 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8.51 %
unclassified Serratia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → unclassified Serratia	3.55 %
Unclassified	root	N/A	3.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.84 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.42 %
Acidicapsa ligni	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	0.71 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.71 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.71 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.71 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.71 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	8.51 %
Serratia sp. M24T3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → unclassified Serratia → Serratia sp. M24T3	3.55 %
Unclassified	root	N/A	3.55 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.84 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.42 %
Acidicapsa ligni	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	0.71 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.71 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.71 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.71 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.71 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.71 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459014\|G1P06HT02HHYHK	Not Available	671	Open in IMG/M
3300005332\|Ga0066388_100504675	All Organisms → cellular organisms → Bacteria	1845	Open in IMG/M
3300007255\|Ga0099791_10066224	All Organisms → cellular organisms → Bacteria	1633	Open in IMG/M
3300007255\|Ga0099791_10087552	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1425	Open in IMG/M
3300007255\|Ga0099791_10349362	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300007255\|Ga0099791_10382145	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300007265\|Ga0099794_10590423	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	588	Open in IMG/M
3300007265\|Ga0099794_10619455	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	574	Open in IMG/M
3300009038\|Ga0099829_11279201	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300009088\|Ga0099830_10453373	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300009088\|Ga0099830_11413850	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300009088\|Ga0099830_11418937	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300009089\|Ga0099828_11155776	All Organisms → cellular organisms → Bacteria → Acidobacteria	687	Open in IMG/M
3300009090\|Ga0099827_11404036	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300009100\|Ga0075418_10785614	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300009101\|Ga0105247_10386492	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300009137\|Ga0066709_101658790	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300009143\|Ga0099792_10036468	All Organisms → cellular organisms → Bacteria	2314	Open in IMG/M
3300009143\|Ga0099792_10099391	All Organisms → cellular organisms → Bacteria → Acidobacteria	1525	Open in IMG/M
3300009143\|Ga0099792_10269320	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	999	Open in IMG/M
3300009143\|Ga0099792_10788021	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300009147\|Ga0114129_10776875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → unclassified Serratia → Serratia sp. M24T3	1224	Open in IMG/M
3300009147\|Ga0114129_11582338	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300009147\|Ga0114129_12800737	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300009147\|Ga0114129_13464117	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300009162\|Ga0075423_10025659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5899	Open in IMG/M
3300009162\|Ga0075423_10394890	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300009162\|Ga0075423_10740299	All Organisms → cellular organisms → Bacteria → Proteobacteria	1039	Open in IMG/M
3300009162\|Ga0075423_12563373	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300009177\|Ga0105248_10527632	All Organisms → cellular organisms → Bacteria	1331	Open in IMG/M
3300009792\|Ga0126374_10286860	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300010043\|Ga0126380_10087175	All Organisms → cellular organisms → Bacteria	1830	Open in IMG/M
3300010043\|Ga0126380_10296379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → unclassified Serratia → Serratia sp. M24T3	1148	Open in IMG/M
3300010043\|Ga0126380_11680296	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300010043\|Ga0126380_11976585	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300010046\|Ga0126384_10892399	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300010046\|Ga0126384_10912307	All Organisms → cellular organisms → Bacteria → Proteobacteria	794	Open in IMG/M
3300010046\|Ga0126384_11481429	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300010046\|Ga0126384_12312207	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300010047\|Ga0126382_10549463	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300010047\|Ga0126382_10766107	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300010047\|Ga0126382_11318465	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	654	Open in IMG/M
3300010048\|Ga0126373_10488001	Not Available	1272	Open in IMG/M
3300010048\|Ga0126373_12945544	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300010048\|Ga0126373_13236767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	507	Open in IMG/M
3300010159\|Ga0099796_10126230	Not Available	988	Open in IMG/M
3300010304\|Ga0134088_10048097	All Organisms → cellular organisms → Bacteria	1956	Open in IMG/M
3300010337\|Ga0134062_10712244	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	528	Open in IMG/M
3300010358\|Ga0126370_11116992	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300010359\|Ga0126376_12374207	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300010359\|Ga0126376_12823894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300010359\|Ga0126376_13175165	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300010360\|Ga0126372_12095337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	613	Open in IMG/M
3300010360\|Ga0126372_12413929	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300010361\|Ga0126378_10052506	All Organisms → cellular organisms → Bacteria	3807	Open in IMG/M
3300010361\|Ga0126378_10109421	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidicapsa → Acidicapsa ligni	2744	Open in IMG/M
3300010361\|Ga0126378_11040518	All Organisms → cellular organisms → Bacteria → Proteobacteria	921	Open in IMG/M
3300010361\|Ga0126378_11078999	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300010361\|Ga0126378_12666413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300010361\|Ga0126378_12694105	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300010361\|Ga0126378_13026687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M
3300010362\|Ga0126377_10530119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1213	Open in IMG/M
3300010362\|Ga0126377_12544236	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300010362\|Ga0126377_12717676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → unclassified Serratia → Serratia sp. M24T3	570	Open in IMG/M
3300010366\|Ga0126379_11257448	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300010366\|Ga0126379_12390817	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300010366\|Ga0126379_13028053	All Organisms → cellular organisms → Bacteria → Proteobacteria	562	Open in IMG/M
3300010376\|Ga0126381_103446178	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300010396\|Ga0134126_11342207	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300010398\|Ga0126383_11367081	All Organisms → cellular organisms → Bacteria → Proteobacteria	798	Open in IMG/M
3300010398\|Ga0126383_12153382	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300010398\|Ga0126383_12210704	Not Available	636	Open in IMG/M
3300010398\|Ga0126383_12407325	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	611	Open in IMG/M
3300010403\|Ga0134123_13235325	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300011269\|Ga0137392_10080358	All Organisms → cellular organisms → Bacteria	2529	Open in IMG/M
3300011271\|Ga0137393_10317705	All Organisms → cellular organisms → Bacteria → Acidobacteria	1327	Open in IMG/M
3300012096\|Ga0137389_10853107	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	782	Open in IMG/M
3300012189\|Ga0137388_11464900	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300012189\|Ga0137388_11595131	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300012189\|Ga0137388_11915399	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300012189\|Ga0137388_11964753	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300012198\|Ga0137364_11037474	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300012200\|Ga0137382_11165802	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300012202\|Ga0137363_10239939	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1470	Open in IMG/M
3300012202\|Ga0137363_10935525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	736	Open in IMG/M
3300012203\|Ga0137399_10327608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1269	Open in IMG/M
3300012203\|Ga0137399_10955281	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300012205\|Ga0137362_10887673	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300012208\|Ga0137376_11224930	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	640	Open in IMG/M
3300012208\|Ga0137376_11616651	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300012209\|Ga0137379_11363566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	613	Open in IMG/M
3300012210\|Ga0137378_11740879	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	529	Open in IMG/M
3300012211\|Ga0137377_10500212	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1154	Open in IMG/M
3300012211\|Ga0137377_11937507	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300012285\|Ga0137370_10679786	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300012349\|Ga0137387_10266452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1237	Open in IMG/M
3300012349\|Ga0137387_10645658	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300012351\|Ga0137386_10338487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → unclassified Serratia → Serratia sp. M24T3	1083	Open in IMG/M
3300012354\|Ga0137366_10372208	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300012355\|Ga0137369_11148358	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300012356\|Ga0137371_11249793	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300012361\|Ga0137360_10023827	All Organisms → cellular organisms → Bacteria → Acidobacteria	4136	Open in IMG/M
3300012361\|Ga0137360_10997022	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300012362\|Ga0137361_11211496	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	678	Open in IMG/M
3300012363\|Ga0137390_10797327	All Organisms → cellular organisms → Bacteria → Acidobacteria	902	Open in IMG/M
3300012582\|Ga0137358_10403100	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	925	Open in IMG/M
3300012685\|Ga0137397_10140381	All Organisms → cellular organisms → Bacteria → Proteobacteria	1787	Open in IMG/M
3300012896\|Ga0157303_10076891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	755	Open in IMG/M
3300012917\|Ga0137395_10047699	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2677	Open in IMG/M
3300012923\|Ga0137359_10043953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3873	Open in IMG/M
3300012923\|Ga0137359_10207378	All Organisms → cellular organisms → Bacteria → Proteobacteria	1750	Open in IMG/M
3300012924\|Ga0137413_10018195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3638	Open in IMG/M
3300012925\|Ga0137419_10190597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1511	Open in IMG/M
3300012929\|Ga0137404_12075739	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300012930\|Ga0137407_10167479	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300012948\|Ga0126375_10145803	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300012948\|Ga0126375_10148209	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1475	Open in IMG/M
3300012948\|Ga0126375_10907996	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300012948\|Ga0126375_11078711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300012948\|Ga0126375_11366458	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300012961\|Ga0164302_10000979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8601	Open in IMG/M
3300012971\|Ga0126369_10430463	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300012971\|Ga0126369_10545421	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300012971\|Ga0126369_11461734	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300012971\|Ga0126369_11533446	Not Available	756	Open in IMG/M
3300012971\|Ga0126369_11637095	All Organisms → cellular organisms → Bacteria → Proteobacteria	733	Open in IMG/M
3300012971\|Ga0126369_12674861	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300012989\|Ga0164305_10891277	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300013296\|Ga0157374_11883504	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300013297\|Ga0157378_11955788	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300014969\|Ga0157376_11668591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Yersiniaceae → Serratia → unclassified Serratia → Serratia sp. M24T3	672	Open in IMG/M
3300015358\|Ga0134089_10190417	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300015373\|Ga0132257_102785193	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300015374\|Ga0132255_104351462	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	600	Open in IMG/M
3300026304\|Ga0209240_1000732	All Organisms → cellular organisms → Bacteria	13514	Open in IMG/M
3300027671\|Ga0209588_1130014	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300031231\|Ga0170824_111982415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1697	Open in IMG/M
3300031446\|Ga0170820_15392993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1012	Open in IMG/M
3300031564\|Ga0318573_10071384	All Organisms → cellular organisms → Bacteria	1736	Open in IMG/M
3300032261\|Ga0306920_100615141	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300032261\|Ga0306920_104295947	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.94%
Host-Associated	Host-Associated	11.35%
Engineered	Engineered	0.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.94%
Plants	Host-Associated → Plants	11.35%
Solid Waste	Engineered → Solid Waste	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.94%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.42%
Grass	Engineered → Solid Waste → Grass	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.42%
Loam	Environmental → Terrestrial → Soil → Loam	0.71%
Composting	Engineered → Solid Waste → Grass → Composting	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	82.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.93%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.71%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	41.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	35.46%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.13%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.13%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.71%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2PV_04307890	2170459014	Switchgrass, Maize And Mischanthus Litter	LIQAADGDARALSVEFLRCGQPDPAVAAGDKDILAR
Ga0066388_1005046751	3300005332	Tropical Forest Soil	QRPLIQAADGDARALSVEFLRCGQPDPAVAAGDKDILVR*
Ga0099791_100662241	3300007255	Vadose Zone Soil	RPLIQAADGDARALSVEFLRCGQPDPAVAAGDKDILVR*
Ga0099791_100875523	3300007255	Vadose Zone Soil	IQAADGDARALSVEFLRCGQPDPAVAAGDKDILVR*
Ga0099791_103493622	3300007255	Vadose Zone Soil	QAADGDARALSVEFLRCGQPDPAVTAGDKDILVR*
Ga0099791_103821452	3300007255	Vadose Zone Soil	QAADGDARALSVEFLRRGQPDPAVAAGDKNILAR*
Ga0099794_105904231	3300007265	Vadose Zone Soil	LIQAADGDARALSVEFLRCGQPDPAVAAGDKDILVR*
Ga0099794_106194552	3300007265	Vadose Zone Soil	SRLQRPLIQAADGNARALSVEFLRCGQPDSAIAANDEDVLVR*
Ga0099829_112792011	3300009038	Vadose Zone Soil	PLIQAADGDARALSVEFLRCGQPDPAVAACDKDILVR*
Ga0099830_104533731	3300009088	Vadose Zone Soil	IQAADGDARALSVEFLRCGQPDPAVTAGDKDILVR*
Ga0099830_114138501	3300009088	Vadose Zone Soil	LIQAADGDARALSVEFLRCGQPDPAVAAGDKDILAR*
Ga0099830_114189371	3300009088	Vadose Zone Soil	LIQAADGNARALSVEFLRCGQPDPAVAARDKDILAR*
Ga0099828_111557762	3300009089	Vadose Zone Soil	QAADGNARALSVEFLRCGQPDSAIAAGDEDVLVR*
Ga0099827_114040361	3300009090	Vadose Zone Soil	QAADGDARALSVEFLRCGQPDPAVAACDKDILVR*
Ga0075418_107856142	3300009100	Populus Rhizosphere	IQAADGDARALSVEFLRRGQPDPAVAAGDQDILFR*
Ga0105247_103864921	3300009101	Switchgrass Rhizosphere	LIQAADGDARALSVEFLRCGQPDSAIAAGDEDVLVR*
Ga0066709_1016587902	3300009137	Grasslands Soil	PLIQAADGDARSLSVEFLRRGQPDPAVAAGDQDILVR*
Ga0099792_100364684	3300009143	Vadose Zone Soil	QAADGDARALSVEFLRCGQPDPAVAAGDKDILVR*
Ga0099792_100993911	3300009143	Vadose Zone Soil	IQAADGNARALSVEFLRCGQPDSAIAAGYKDVLVR*
Ga0099792_102693202	3300009143	Vadose Zone Soil	LQRPLIQAADGDTRALSVEFLRCGQPDPAVAAGDKDILVR*
Ga0099792_107880211	3300009143	Vadose Zone Soil	LIQAADGDARALSVKFLRCGQPDPAVATGDKDILAR*
Ga0114129_107768752	3300009147	Populus Rhizosphere	IQAADGDARALSVEFLRCGQPDPAVAAGDEDILAC*
Ga0114129_115823381	3300009147	Populus Rhizosphere	IQAADGDARALSVEFLRGGQPDPAVAAGDEDILVS*
Ga0114129_128007372	3300009147	Populus Rhizosphere	QRSLIQAADGDARALSVEFLRCGPPDSAVAACDQDILVR*
Ga0114129_134641172	3300009147	Populus Rhizosphere	QAADGDARALSVEFLRCGQPNPAVAACDKDILVR*
Ga0075423_100256596	3300009162	Populus Rhizosphere	PRIQAADGDARALSVEFLRCGQPDPAVAAGDKDIFAC*
Ga0075423_103948903	3300009162	Populus Rhizosphere	RGIIQAADGDTRALSVEFLRCGPPDPAVAAGDKDILVR*
Ga0075423_107402991	3300009162	Populus Rhizosphere	LIQAANGDARALSVEFLRCGQADPAIAAGDKDILVR*
Ga0075423_125633732	3300009162	Populus Rhizosphere	QRPLIQPADGDARALSFEFLRSRQPDPAVAAGDKDILIR*
Ga0105248_105276321	3300009177	Switchgrass Rhizosphere	LIQAADGDARALSVEFLRCGQPDPAVAACDKDILVR*
Ga0126374_102868601	3300009792	Tropical Forest Soil	IQAADGNARALSVEFLRCSQPNPAVASGDEDILSH*
Ga0126380_100871753	3300010043	Tropical Forest Soil	QRPLIQAADGDSRALLVEFLRCGKPDPAVAAGDKEILVC*
Ga0126380_102963793	3300010043	Tropical Forest Soil	GRLQRPLIQAADGDARTLSVEFLGCRQPDPAVAAGDKDILVR*
Ga0126380_116802961	3300010043	Tropical Forest Soil	RPLIQATDGDARALSVEFLRCGQPDPAIAACDKDILAG*
Ga0126380_119765851	3300010043	Tropical Forest Soil	IQAADGDARALSIEFLRRGQPDPAVAAGDEDILVR*
Ga0126384_108923992	3300010046	Tropical Forest Soil	PLIQAADGDARALSVEFLRCGQPDPAVAAGDKDILVR*
Ga0126384_109123071	3300010046	Tropical Forest Soil	SRLQRPLIQAADGDARALSVEFLRCGQPDPAIAAGDKDILVR*
Ga0126384_114814292	3300010046	Tropical Forest Soil	QRPLIQAADGDARALSVEFLRGGQPDPAVAAGDKDILVS*
Ga0126384_123122071	3300010046	Tropical Forest Soil	IQAADGDARALSVEFLRCGQPDPAVAAGDKDVLAC*
Ga0126382_105494634	3300010047	Tropical Forest Soil	IQAADGDPRALSVKFPRRGQPDPAVAAGDKDVLVR*
Ga0126382_107661071	3300010047	Tropical Forest Soil	LSRLQRPLIQAADGDARALSVEFLRCGQPDPAVTAGDKDILVR*
Ga0126382_113184652	3300010047	Tropical Forest Soil	LQRPLIQAADGDARALSVEFLGSSQPDPAVPAGDKNILVR*
Ga0126373_104880011	3300010048	Tropical Forest Soil	IQAADGDARALSVEFLRCGQPDPAVAAGDKDILAG*
Ga0126373_129455442	3300010048	Tropical Forest Soil	PLIQAADGDARALSVEFLRCGQPDPAVAAGDKEILVR*
Ga0126373_132367672	3300010048	Tropical Forest Soil	LIQAADGDARALSVEFLRCGQPDPAVAAGDKNVLAR*
Ga0099796_101262301	3300010159	Vadose Zone Soil	LQRPLIQAADGDARALSVEFLRCGQPDPAVAAGDKDILVR*
Ga0134088_100480974	3300010304	Grasslands Soil	LIQAADGDARSLSVEFLRRGQPDPAVAAGDKDILVR*
Ga0134062_107122443	3300010337	Grasslands Soil	QAADGDARSLSVEFLRRGQPDPAVAAGNKDILGR*
Ga0126370_111169921	3300010358	Tropical Forest Soil	LIQAADGDARALSVEFLRCGQPDSAVAAGDKDMLVR*
Ga0126376_123742072	3300010359	Tropical Forest Soil	QAADGDAGALSVEFLRCGQPDAAVAACDKDVLAR*
Ga0126376_128238942	3300010359	Tropical Forest Soil	QAADGDARALSVEFLRGGQPDPAVAAGNKDIFAR*
Ga0126376_131751652	3300010359	Tropical Forest Soil	RLQRPLIQAADGDARALSVEFLRRGQPDPAVAAGDEDILAC*
Ga0126372_120953371	3300010360	Tropical Forest Soil	FIQAADGDARALSVEFLRCGQPDPAVAAGDEDIFAR*
Ga0126372_124139291	3300010360	Tropical Forest Soil	LIQAADGDARALSVEFLRRGQPDSAVAAGDKDILVR*
Ga0126378_100525065	3300010361	Tropical Forest Soil	RLQRPLIQAADGDVRTLSVEFLRCGQPDAAVAACDKDILAR*
Ga0126378_101094211	3300010361	Tropical Forest Soil	LIQAADGDARALSVEFLRCGQPDPAVAACDKDILAR*
Ga0126378_110405183	3300010361	Tropical Forest Soil	SRLQRPLIQAADGDARALSVEFLRCGQPDPAVAASDKDILAR*
Ga0126378_110789992	3300010361	Tropical Forest Soil	LIQAADGDARALSVEFLRCGQPDPAVAAGDKEILAR*
Ga0126378_126664132	3300010361	Tropical Forest Soil	RCLQRPLIQPADGDARTLSVKFLRCGQPDSAIAACDEDVLSA*
Ga0126378_126941052	3300010361	Tropical Forest Soil	QAADGDAGAFSVEFLSCGQPDPAVAAGDKNVLAR*
Ga0126378_130266872	3300010361	Tropical Forest Soil	LIQAADGDTRALSVEFLRCGQPDPAVTAGDKEILAR*
Ga0126377_105301191	3300010362	Tropical Forest Soil	PLIQAADGDARALSVEFLRCGQPDPAVAACDKDILAG*
Ga0126377_125442362	3300010362	Tropical Forest Soil	DMIQLHCDARALAVDFRRGGRPDPAVAAGDKDILVR*
Ga0126377_127176762	3300010362	Tropical Forest Soil	QRPRIQPANGDARALSVEFLRCGQSDPAVTAGDEDILAC*
Ga0126379_112574481	3300010366	Tropical Forest Soil	IQAADGDVRTLSVEFLRCGQPDAAVAACDKDILAR*
Ga0126379_123908173	3300010366	Tropical Forest Soil	KRLLGRSQRPLIQAADGDARALSVEFLRCGQANPAVAAGDKDILAR*
Ga0126379_130280531	3300010366	Tropical Forest Soil	LIQAADGDARALAVEFLRGGQPNPAVAAGDKDILVR*
Ga0126381_1034461781	3300010376	Tropical Forest Soil	IQAANGDACALSVEFLRCGQPDSTIAACDEDVLVR*
Ga0134126_113422073	3300010396	Terrestrial Soil	RLQRPFIQAADGDARALSVEFLRCGQPDPAVAASDKNILVR*
Ga0126383_113670812	3300010398	Tropical Forest Soil	LLSRLQRPLIQAADGDVRALSVEFLRCGQPDPAVAAGDKDIFVR*
Ga0126383_121533821	3300010398	Tropical Forest Soil	RPLIQAADGDARALSVEFLRCGQPDPAVAAGDKDILAR*
Ga0126383_122107041	3300010398	Tropical Forest Soil	QAADGDARAFFIEFLCCGQPNPAVAACDKDILVR*
Ga0126383_124073251	3300010398	Tropical Forest Soil	LSRLQRPLIQAADGDTRAFSVEFLRCGQPDPAVAAGDKDILAR*
Ga0134123_132353252	3300010403	Terrestrial Soil	QAADGDARALSVEFLRRGQPDPAVATCDKDILVR*
Ga0137392_100803581	3300011269	Vadose Zone Soil	RPLIQAADGDARALSVEFLRCGQPDPAVAAGDKDIFAC*
Ga0137393_103177051	3300011271	Vadose Zone Soil	IQAANRDARALSVEFLRCGQPDPAVAAGDKDILVR*
Ga0137389_108531073	3300012096	Vadose Zone Soil	SRLQRPLIQAADGDARALSVEFLRCGQPDPAVAAGDKDILVR*
Ga0137388_114649002	3300012189	Vadose Zone Soil	PLIQAADGDARALSVEFLRCGQPDPAVAAGDKDIFAC*
Ga0137388_115951311	3300012189	Vadose Zone Soil	LIQAADGDARALSVKFLRRGQPDPAVAAGDKDILAR*
Ga0137388_119153992	3300012189	Vadose Zone Soil	MIQPYCDARALSIEFLRCGQPDPAVAAGDKDILVR*
Ga0137388_119647532	3300012189	Vadose Zone Soil	QAADGDARALSVEFLRRGQPDPAVAAGDKDILVR*
Ga0137364_110374742	3300012198	Vadose Zone Soil	LIQAADGDARALSVEFLRCGQPDPAVAAGNKDVFAC*
Ga0137382_111658021	3300012200	Vadose Zone Soil	PPIQAAYGDASTLSVEFLRCRQSDPAVAAGDKDILVC*
Ga0137363_102399391	3300012202	Vadose Zone Soil	IQAADGDPRALSVEFLRCGQPDPAVAAGDKDLLSR*
Ga0137363_109355252	3300012202	Vadose Zone Soil	IQAADGDARALSVEFLRCGQPDPAVAAGDKNILVR*
Ga0137399_103276081	3300012203	Vadose Zone Soil	SRLQRPRIQAADGDARARSVEFLRCGQPDPAVAAGDKDIFAC*
Ga0137399_109552811	3300012203	Vadose Zone Soil	RLQRPLIQAADGDARALSAEFLRCGQPDPAVTAGDKDILVR*
Ga0137362_108876732	3300012205	Vadose Zone Soil	SRLQRPLIQAADGDARALSVEFLRCGQPDPAVAAGNKDILVR*
Ga0137376_112249302	3300012208	Vadose Zone Soil	LQGPLIQAADGDTRALSVEFLRCGQPDPAVAAGDKDIFAC*
Ga0137376_116166511	3300012208	Vadose Zone Soil	IQAADGNARALSVEFLRCGQPDSAIAAGDEDVLVR*
Ga0137379_113635662	3300012209	Vadose Zone Soil	LIQAADGDARALSVEFLRCGQPDPAVTAGDKDILVR*
Ga0137378_117408791	3300012210	Vadose Zone Soil	LIQAADGDARALSVEFLRCGQPDPAVAAGDKNILVR*
Ga0137377_105002122	3300012211	Vadose Zone Soil	SRLQRPLIQAADGDARALSVKFLRRGQPDPAVAAGDKDILVR*
Ga0137377_119375072	3300012211	Vadose Zone Soil	RRLKRRLIQAADGDARALSVEFLRCGQPDPTVAAGDKDILVR*
Ga0137370_106797862	3300012285	Vadose Zone Soil	LIQAADGDARALSVEFLRCGQPDPAVAAGDKYILVC*
Ga0137387_102664523	3300012349	Vadose Zone Soil	PLIQAADGDARALSFEFLRRGQPDPAVAAGDKDILVR*
Ga0137387_106456581	3300012349	Vadose Zone Soil	LIQAADGDARALSIEFLRCGQPDPAVAAGDKDILVR*
Ga0137386_103384872	3300012351	Vadose Zone Soil	RPLIQAADGDARALSVEFLRCGQPDPAVTAGDKDILVR*
Ga0137366_103722081	3300012354	Vadose Zone Soil	IQAADGDARALSVEFLRCGQPDPAVAAGDKDILAR*
Ga0137369_111483582	3300012355	Vadose Zone Soil	LIQAADGDSRALSVEFLRCGQPDPAVAAGDKNILVR*
Ga0137371_112497931	3300012356	Vadose Zone Soil	LIQAADGDARALSVEFLRCGQPDPAVAAGDKDILPR*
Ga0137360_100238271	3300012361	Vadose Zone Soil	SRLQRPLIQAADGNARALSVEFLRCGQPDSAIAAGDEDILVR*
Ga0137360_109970223	3300012361	Vadose Zone Soil	QAADGDARALSVEFLRCGQPDPAVAAGNKDILGR*
Ga0137361_112114961	3300012362	Vadose Zone Soil	MIQLHSDARALSVEFLRCGQPDPAVAAGDKDILVR*
Ga0137390_107973272	3300012363	Vadose Zone Soil	QAADGNARALSVKFLRCGQPDPAVAAGDEDVLVR*
Ga0137358_104031001	3300012582	Vadose Zone Soil	PLIQAADGDGRALSVEFLRCGQPDPAVAAGDKDILAR*
Ga0137397_101403811	3300012685	Vadose Zone Soil	LIQAADGDARALSVEFLRCGQPDPAVAARDEDILVR*
Ga0157303_100768911	3300012896	Soil	RPLIQAADGDPRALSVEFLRCGQPDPAVAAGDKDILAR*
Ga0137395_100476991	3300012917	Vadose Zone Soil	LIQAADGDARALSVEFLRCGQADAAVAAGDKNILVR*
Ga0137359_100439535	3300012923	Vadose Zone Soil	LQRPLIHAADGDARALSGEFPRCGQPDPAVAAGDKDILVR*
Ga0137359_102073781	3300012923	Vadose Zone Soil	IQAADGDARALSVEFLRCGQPDPAVAARDEDILVR*
Ga0137413_100181957	3300012924	Vadose Zone Soil	SRPQRSLIQAADGDARALSVKFLSCGQPDPAVTAGDKDILVR*
Ga0137419_101905971	3300012925	Vadose Zone Soil	LQRPLIQAADGDARALSVKFLSRGQPDPAVAAGDKDILVR*
Ga0137404_120757391	3300012929	Vadose Zone Soil	IQAADGNARALSVEFLRCGEPDSAIAACDEDVLVR*
Ga0137407_101674794	3300012930	Vadose Zone Soil	PLIQAADGDARALSVEFLRCGQPDPAVAAGNKDILGR*
Ga0126375_101458032	3300012948	Tropical Forest Soil	IQAADGNACALSVEFMRCGQPDPAIAAGDKDILVR*
Ga0126375_101482092	3300012948	Tropical Forest Soil	LLGRLQRPLIQAADGDARALSVEFLRRGQPNPAVAAGDKDILAL*
Ga0126375_109079963	3300012948	Tropical Forest Soil	LLSRLQRPFIQAADGDARALSVEFLRCGQPDPAVAAGDKDILVR*
Ga0126375_110787112	3300012948	Tropical Forest Soil	QAADGDARALSVEFLRCGQPDPAVAAGNKDIFAR*
Ga0126375_113664581	3300012948	Tropical Forest Soil	RSLIQAADGNARALSVEFLRCGQPDSAIAACDEDVLVR*
Ga0164302_100009791	3300012961	Soil	LRRLQRPLIQAADGDARALSAEFLRCGPPDPAVTAGDEDILVR*
Ga0126369_104304633	3300012971	Tropical Forest Soil	RIQAADGNARALSVEFLRGGKPDPAVAAGDENILAC*
Ga0126369_105454211	3300012971	Tropical Forest Soil	RPLIQAADGDARALSVEFLRCGQPDPAVAAGNKDIFAR*
Ga0126369_114617341	3300012971	Tropical Forest Soil	RLQRPFIQAADGNARSMSVEFLRCGQPDPAVAAGDKDILVR*
Ga0126369_115334463	3300012971	Tropical Forest Soil	MIQLHCDARALSVEILPRCQTDPSVAAGDKDILVR*
Ga0126369_116370952	3300012971	Tropical Forest Soil	KGLLGRLQRPLIQAADGDARALSVEFLRCGQPDPAIAASDKDILVR*
Ga0126369_126748611	3300012971	Tropical Forest Soil	RPLIQAADGDARALSVEFLRRGQPDPAVAAGDKDILVH*
Ga0164305_108912773	3300012989	Soil	QAADGDARALSVEFLRCGQPDPAVAAGDKNILAR*
Ga0157374_118835041	3300013296	Miscanthus Rhizosphere	PLIQAADGNARALSVEFLRCGQPDSAIAAGDEDVLVR*
Ga0157378_119557882	3300013297	Miscanthus Rhizosphere	VQRPLIQAADGDARALSVEFLRRGQPDPAIATGDEDILVR*
Ga0157376_116685912	3300014969	Miscanthus Rhizosphere	LIQAADGDARALSVEFLRCGQPDPAVTAGDEDILVR*
Ga0134089_101904172	3300015358	Grasslands Soil	IQAADGDARALSVEFLRCGQPDPTVAAGDKDILAR*
Ga0132257_1027851931	3300015373	Arabidopsis Rhizosphere	IQAADGDARALSVEFLRCGQPNPAVAACDKDILVR*
Ga0132255_1043514622	3300015374	Arabidopsis Rhizosphere	LQRPLIQAADGDARALSVEFLRCGQPDAAVAAGDKEILVR*
Ga0209240_10007321	3300026304	Grasslands Soil	PLIQAADGDARALLVEFLRCGKPDPAVAAGDKDILAR
Ga0209588_11300141	3300027671	Vadose Zone Soil	SPLQRPRIQAADGDARALSVEFLRRGQPDPAVAAGDKDILVR
Ga0170824_1119824155	3300031231	Forest Soil	QRPLIQAADGDARALSVEFLRRGQPDPAVATCDKDILVR
Ga0170820_153929933	3300031446	Forest Soil	LIQAADGDARALSVEFLGCSQPDPAVAAGDEDILVR
Ga0318573_100713841	3300031564	Soil	LGRLQRPLIQAADGDARTLSVELLRRGQPNPAVAAGD
Ga0306920_1006151413	3300032261	Soil	PLIQAADGDARTLSLELLRRGQPDPAVAAGDKDILVR
Ga0306920_1042959472	3300032261	Soil	LQRPLIKAADGDARALSVELLRCSQADPAIAAGDKDILVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F053093

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences