Metagenome / Metatranscriptome Family F053188

Basic Information
Family ID	F053188
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	85 residues
Representative Sequence	NDKIVPILKKQAGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYSSVRETMQSLLEAEPVVRTFEVHTSTGHKITAGKAA
Number of Associated Samples	98
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	5.26 %
% of genes near scaffold ends (potentially truncated)	11.35 %
% of genes from short scaffolds (< 2000 bps)	9.22 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Most Common Taxonomy
Group	Unclassified (86.525 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (32.624 % of family members)
Environment Ontology (ENVO)	Unclassified (46.099 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.773 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.24% β-sheet: 15.04% Coil/Unstructured: 63.72%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF07366	SnoaL	9.22
PF00072	Response_reg	4.26
PF00717	Peptidase_S24	3.55
PF08031	BBE	2.84
PF09723	Zn-ribbon_8	2.84
PF00196	GerE	2.13
PF04430	DUF498	2.13
PF02780	Transketolase_C	2.13
PF04120	Iron_permease	1.42
PF01381	HTH_3	1.42
PF13519	VWA_2	0.71
PF13561	adh_short_C2	0.71
PF05222	AlaDh_PNT_N	0.71
PF00571	CBS	0.71
PF02233	PNTB	0.71
PF00005	ABC_tran	0.71
PF12367	PFO_beta_C	0.71
PF02405	MlaE	0.71
PF00076	RRM_1	0.71
PF01258	zf-dskA_traR	0.71
PF13751	DDE_Tnp_1_6	0.71
PF13683	rve_3	0.71
PF01855	POR_N	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	2.84
COG1504	Uncharacterized conserved protein, DUF498 domain	Function unknown [S]	2.13
COG3737	Uncharacterized protein, contains Mth938-like domain	Function unknown [S]	2.13
COG0674	Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.71
COG0767	Permease subunit MlaE of the ABC-type intermembrane phospholipid transporter Mla	Cell wall/membrane/envelope biogenesis [M]	0.71
COG1282	NAD/NADP transhydrogenase beta subunit	Energy production and conversion [C]	0.71
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	0.71
COG4231	TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit	Energy production and conversion [C]	0.71

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.52 %
All Organisms	root	All Organisms	13.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.52 %
cellular organisms	root	All Organisms → cellular organisms	13.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.52 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	13.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.52 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	9.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.52 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	6.38 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6.38 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005586\|Ga0066691_10008590	All Organisms → cellular organisms → Bacteria	4642	Open in IMG/M
3300006791\|Ga0066653_10301385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300006797\|Ga0066659_10245378	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300009038\|Ga0099829_10077925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2529	Open in IMG/M
3300010335\|Ga0134063_10690284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300011270\|Ga0137391_10018121	All Organisms → cellular organisms → Bacteria → Acidobacteria	5771	Open in IMG/M
3300012199\|Ga0137383_10010641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6139	Open in IMG/M
3300012203\|Ga0137399_11349279	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300012208\|Ga0137376_11552873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300012285\|Ga0137370_10232140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1089	Open in IMG/M
3300018468\|Ga0066662_10121579	All Organisms → cellular organisms → Bacteria → Acidobacteria	1906	Open in IMG/M
3300019789\|Ga0137408_1281594	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300020018\|Ga0193721_1061202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	985	Open in IMG/M
3300025910\|Ga0207684_10009286	All Organisms → cellular organisms → Bacteria → Acidobacteria	8687	Open in IMG/M
3300025922\|Ga0207646_10003194	All Organisms → cellular organisms → Bacteria → Acidobacteria	18730	Open in IMG/M
3300026277\|Ga0209350_1104733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300026358\|Ga0257166_1047747	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300026542\|Ga0209805_1144412	All Organisms → cellular organisms → Bacteria	1101	Open in IMG/M
3300028673\|Ga0257175_1062924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.45%
Aquatic	Environmental → Aquatic	3.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.45%
Sediment	Environmental → Aquatic → Sediment	2.13%
Freshwater	Environmental → Aquatic → Freshwater	1.42%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.49%
Loam	Environmental → Terrestrial → Soil → Loam	4.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.13%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.42%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	41.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.67%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.13%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.42%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	32.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	31.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.51%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	4.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.55%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.13%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.42%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.71%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020012	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026358	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-B	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031044	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031872	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU2 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25390J43892_100393213	3300002911	Grasslands Soil	VVELTSKPRKSRELSSLINDKIVPILKKQAGFVDEIVLVSDADSDRVLALSFWKTREDAERYQRGQYNSVRETLQPVLETEPVVRTFEVHTSTGHRIAAGKAA*
JGI25390J43892_100876391	3300002911	Grasslands Soil	VELVSKQGKARELSSTINVKIVPILKKQPGFADEIVLVSDADSNRVLALSFWKTREDAERYQREQYKSVRDTLQSLLEAEPVVRTFEVHTSTGHKITAGXAA*
Ga0066672_108560471	3300005167	Soil	ELVSKQGKARELSSTINDKIVPILKKQGGFEDEIVLVSDADSNRVLALSFWKSREDAERYQREQYNSVRETLQPVLEGEPVVSTFEVHTSTGHKITAGKAA*
Ga0066677_101042823	3300005171	Soil	VDEIVLVSDAERDRVLALSFWKTREDAERYHREQYNTVREKLQHLIDAEPVIRTFDVHTSTGHKIAAGKAA*
Ga0066683_107978491	3300005172	Soil	LKKQAGFVDEIVLVSDAERDRVLALSFWKTREDAERYHREQYNTVREKLQHLIDAEPVIRTFDVHTSTGHKIAAGKAA*
Ga0066680_103168362	3300005174	Soil	AVPILKKQKGFVDEIVLVSDEEGDRVLALSFWKTSEDAERYQREQYNNVRETIQPLLEAEPVIRTFDVHTSTGHKIAAGKAA*
Ga0066680_108831851	3300005174	Soil	KKQAGFVDEIVLVSDAERDRVLALSFWKTREDAERYHREQYNTVREKLQHLIDAEPVIRTFDVHTSTGHKIAAGKAA*
Ga0066679_100532725	3300005176	Soil	EIVLVSDADSNRVLALNFWKARQDAERYQREQYNSVRDTLQSLLEAEPVVRTFEVHTSTGHKITAGKAA*
Ga0066690_100580041	3300005177	Soil	KQGKARELSSTTNDQIVPILKKHGGFEDEIVLVSDADSNRVLALSFWKSREDAERYQREQYNSVRETLQPVLEGEPVVSTFEVHTSTGHKITAGKAA*
Ga0066688_101462631	3300005178	Soil	RVVELTSKPRKSRELSSLINDKIVPILKKQAGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYSSVRETMQSLLKAEPVVRTFEVHTSTGHKITAGKAA*
Ga0066688_102156541	3300005178	Soil	NDKVVPILKKQAGFVDEIVLVSDADSNRVLALSFWKGRDDAERYQREQYNSVRDNLQPLLEAEPVVRTFEVHTSTGHKITAGKAA*
Ga0066678_103555033	3300005181	Soil	RVVELTSKPRKSRELSSLINDKIVPILKKQARFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYSSVRETMQSLLKAEPVVRTFEVHTSTGHKITAGKAA*
Ga0066678_109905481	3300005181	Soil	AERDRVLALSFWKTREDAERYHREQYNTVREKLQHLIDAEPVIRTFDVHTSTGHKIAAGKAA*
Ga0066676_106441792	3300005186	Soil	INDKIVPILKKQAGFVDEIVLVSDADSDRVLALSFWSKREDAERYQREQYNSVRETLQPLLQADPVVRTFEVHTSTGHKITAGKAA*
Ga0066686_111080422	3300005446	Soil	SDAERDRVLALSSWKTREDAERYHREQYNTVREKLQHLIDAEPVIRTFDVHTSTGHKIAAGKAA*
Ga0070706_1000085381	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MFTGVVELTSKPCKSRELSSLINDTIVPILKKQAGFVDEIVLVSDADSNCVLALSFWKTREDAERYQREQYSSVRETMQSLLEAEPVVRTFEVHTSTGHKITPGKAA*
Ga0070697_1016816651	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VPILKKQPGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYKSVRETMQPLLEAEPVVRTFEVHTSTGHKIAAGKAA*
Ga0066697_106419282	3300005540	Soil	VVELVSKQGKARELSSTINDKIVPILKKQAGFEDEIVLVSDADSNRVLALSFWKTREDAERYQRKQYKSVRETLESVLEAEPVVRTFEVHTSTGHKIASGKAA*
Ga0070704_1020556841	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	SDADSDRVLALSFWKTREDAERYQREQYNSVRETMQSVLEADPVVRTFEVHTSTGHKIAAGKAA*
Ga0066661_100497143	3300005554	Soil	LKKQQGFMDEIVLVSDAEPDRVLALSFWKTREDADLYQREHYKNVHESLRHLLETEPKIRTFDVHTSTGHKIAAGKAA*
Ga0066661_106367001	3300005554	Soil	LKKQAGFVDEIVLVSDADSDRVLALSFWKTREDAERYQRGQYNSVRETLQPVLETEPVVRTFEVHTSTGHRIAAGKAA*
Ga0066692_106456961	3300005555	Soil	KKQAGFVDEIVLVSDAERDRVLALSSWKTREDAERYHREQYNTVREKLQHLIDAEPVIRTFDVHTSTGHKSQPAKPPEATPIE*
Ga0066704_104251672	3300005557	Soil	ILKKQAGFVDEIVLVSDADSNRVLALSFWKGRDDAERYQREQYNSVRDNLQPLLEAEPVVRTFEVHTSTGHKITAGKAA*
Ga0066699_105652193	3300005561	Soil	KIVPILKKQGGFEDEIVLVSDADSNRVLALSFWKSREDAERYQREQYNSVRETLQPVLEGEPVVSTFEVHTSTGHKITAGKAA*
Ga0066702_103274011	3300005575	Soil	LKKQAGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYNSVRETLQSLLEAEPVVRTFEVHTSTGHKIASGKAA*
Ga0066708_107658201	3300005576	Soil	ERDRVLALSFWKTREDADRYHQEQYNTVREKLQHLIDAEPVIRTFDVHTSTGHKIAAGKAA*
Ga0066691_1000859010	3300005586	Soil	IVPILKKQAGFVDEIVLVSDADSDRVLALSFWSKREDAERYQREQYDSVRETLQPLLQADPVVRTFEVHTSTGHKIAAGKAA*
Ga0066691_100825081	3300005586	Soil	LTSKPRKSRELSSLINDKIVPILKKQAGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYSSVRETMQSLLKAEPVVRTFEVHTSTGHKITAGKAA*
Ga0066706_103784443	3300005598	Soil	VVELVSKQGKARELSSTINDKIVPILKKQGGFEDEIVLVSDADSNRVLALSFWKSREDAERYQREQYNSVRETLQPVLEGEPVVSTFEVHTSTGHKITAGKAA*
Ga0066706_107321171	3300005598	Soil	ILKKQAGFVDEIVLVSDADSDRVLALSFWSKREDAERYQREQYNSVRETLQPLLQADPVVRTFEVHTSTGHKITAGKAA*
Ga0066652_1011114651	3300006046	Soil	LKKQPGFADEIVLVADADSNRVLALSFWKTREDAERYQREQYNSVRETLQPLLEAEPVVRTFEVHTSTGHRNTAGKAA*
Ga0066653_103013852	3300006791	Soil	VPILKKQPGFADEIVLVSDADSNRVLALSFWNTRQDAERYQREQYHSVRDTLQSLLEAEPVVRTFEVYTSTGRKITAGKAA*
Ga0066658_103837101	3300006794	Soil	KARELSSTINDKIVPILKKQAGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYNSVRETLQPVLDAEPVVRTFEVHTSTGHKITAGKAA*
Ga0066665_103227491	3300006796	Soil	PILKKQGGFEDEIVLVSDADSNRVLALSFWKSREDAERYQREQYNSVRETLQPVLEGEPVVSTFEVHTSTGHKITAGKAA*
Ga0066665_116234921	3300006796	Soil	EIVLVSDADSNRVLALSFWKTREDAERYQREQYKNVRETLRSLLEAEPVVRTFDVHTSTGHKITAGKAA*
Ga0066659_100030271	3300006797	Soil	RELSSLINDKIVPILKKQAGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYSSVRETMQSLLKAEPVVRTFEVHTSTGHKITAGKAA*
Ga0066659_102453783	3300006797	Soil	VSKQGKARELSSTINDKIVPILKKQAGFVYEIVLVSDADSNRVLALNFWKARQDAERYQREQYNSVRDTLQSLLEAEPVVRTFEVHTSTGHKITAGKAA*
Ga0099829_100779255	3300009038	Vadose Zone Soil	AGFVDEIVLVSDADSNRVLALSFWKARQDAERYQREQYKSVRDTLQSLLEAEPVVRTFEVHTSTGHKITAGKAA*
Ga0099828_107233282	3300009089	Vadose Zone Soil	SLINDTILPILRKQAGFVDEIVLVSDADSDRVLALSFWSKREDAERYQREQYNSVRETLQPLLQADPVVRTFEVHTSTGHKITAGKAA*
Ga0066709_1016947521	3300009137	Grasslands Soil	LKKQAGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYNSVRETLQPVLDAEPVVRTVEVHTSTGHKITAGKAA*
Ga0066709_1028159092	3300009137	Grasslands Soil	FTRVVELTSKPRKSRELSSLINDKIVPILKKQAGFVDEIVLVSDADSDRVLALSFWKTREDAERYQRGQYNSVRETLQPVLETEPVVRTFEVHTSTGHKIAAGKAA*
Ga0066709_1032748381	3300009137	Grasslands Soil	VDEIVLVSDADSNRVLALSFWKTREDAARYQREQYNSVRETLQPLLEGEPVVRTFEVHTSTGHKITAGKAA*
Ga0134063_106902841	3300010335	Grasslands Soil	PILKKQPGFADEIVLVSDADSNRVLALSFWNTRQDAERYQREQYNSVRDTLQSLLEAEPVVRTFEVHTSTGHKITAGKAA*
Ga0137391_100181211	3300011270	Vadose Zone Soil	LTSKPRKSRELSSLINDTILPILKKQAGFVDEIVLVSDADSDRVLALSFWSKREDAERYQREQYNSVRETLQPLLQADPVVRTFEVHTSTGHKITAGKAA*
Ga0137364_101727603	3300012198	Vadose Zone Soil	STINDKIVPILKKQPGFADEIVLVADADSNRVLALSFWKTREDAERYQREQYNSVRETLQPLLEAEPVVRTFEVHTSTGHRITAGKAA*
Ga0137364_102612741	3300012198	Vadose Zone Soil	MFTRVVDLLSKQGKARELSSTISDKIVPILKKQPGFADEIVLVSDADSNRVLALSFWNTRQDAERYQREQYHSVRDTLQSLLEAEPVVRTFEVYTSTGRKITAGKAA*
Ga0137364_111849031	3300012198	Vadose Zone Soil	KQGQARELSSTINDRIVPILKKQAGFVDEIVLVSDADSNRVLALSFWKTRDDADRYQREQYNSVRETLQPLLEAEPVVRTFEVHTSTGHRITAGKAA*
Ga0137383_1001064110	3300012199	Vadose Zone Soil	MVSKQGKARELSGTINDKIVPILKKQPGFADEIVLVSDADSNRVLALSFWKSREDAERYQREQYNSVRDTLQPMLEGEPVVSTFEVHTSTGHKITAGKAA*
Ga0137382_101141151	3300012200	Vadose Zone Soil	VDEIVLVSDAERDRVLALSFWKTREDADRYHQEQYNTVREKLQHLIDAEPVIRTFDVHTSTGHKIAAGKAA*
Ga0137382_102883133	3300012200	Vadose Zone Soil	LKKQPGFADEIVLVADADSNRVLALSFWKTREDAERYQREQYNTVRETLQPLLEAEPVIRTFEVHTSTGHKIAGKAA*
Ga0137365_101312101	3300012201	Vadose Zone Soil	GTINDKIVPILKKQPGFADEIVLVSDADSNRVLALSFWKSREDAERYQREQYNSVRDTLQPMLEGEPVVSTFEVHTSTGHKITAGKAA*
Ga0137363_114386221	3300012202	Vadose Zone Soil	AGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYSSVRETMQSLLEAEPVVRTFEIHTSTGHKITAGKAA*
Ga0137363_116544112	3300012202	Vadose Zone Soil	NDKIVPILKKQAGFEDEIVLVSDADSNRVLALSFWKTREDAERYQRKQYKSVRETLESVLEAEPVVRTFEVHSSTGHKITARKAA*
Ga0137399_101932464	3300012203	Vadose Zone Soil	DADSNRVLALSFWKTREDAERYQREQYSSVRETMQSLLEAEPVVRTFEIHTSTGHKITAGKAA*
Ga0137399_113492791	3300012203	Vadose Zone Soil	SKQGKARELSSTINDKIVPILKKQAGFVDEIVLVSDADSDRVLALSFWSKREDAERYQREQYNSVRETLQPLLQADPVVRTFEVHTSTGHKITAGKAA*
Ga0137362_102818282	3300012205	Vadose Zone Soil	MFTRVVELVSKQGKARELSSTINDKIVPILKQQAGFVDEIVLVSDADSNRVLALSFWKARQDAERYQREQYKSVRDTLQSLLEAEPVVRTFEVHTSTGHKITAGKAA*
Ga0137362_105382141	3300012205	Vadose Zone Soil	MFTRVVELTGKPRKSGELSSLINDTIVPILKKQAGFVDEIVLVSDADSDRVLALSFWSKREDAERYQREQYNSVRETLQPLLQADPVVRTFEVHTSTGHKITAGKAA*
Ga0137380_1001353112	3300012206	Vadose Zone Soil	FVDEIVLVSDADSDRVLALSFWKTREDAERYQREQYSSVRETMQSLLEAEPVVRTFEVHTSTGHKITAGKAA*
Ga0137380_110472151	3300012206	Vadose Zone Soil	MVSKQGKARELSGTINDKIVPILKKQPGFADEIVLVSDADSNRVLALSFWKSREDAERYQREQYNSVRDTLQPMLLQPMLEGEPVVSTFGVHTSTGHKITAGKAA*
Ga0137381_102955664	3300012207	Vadose Zone Soil	IVLVSDADSDRVLALSFWKTREDAERYQREQYNSVRETMQSVLEADPVVRTFEVHTSTGHKITAGKAA*
Ga0137381_113478861	3300012207	Vadose Zone Soil	MVSKQGKARELSGTINDKIVPILKKQPGFADEIVLVSDADSNRVLALSFWKSREDAERYQREQYNSVRDTLQPMLLQPMLEGEPVVSTFEVHTSTGHKITAGKA
Ga0137376_102778474	3300012208	Vadose Zone Soil	LRIFCSGLDATLSSGLNRVLALSFWKTREDAERYQREQYNSVRDALQPLLEAEPVVRTFEVHSSTGHKITASKAA*
Ga0137376_106858901	3300012208	Vadose Zone Soil	ELSSLINDTIVPILKKQAGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYSSVRETMQSLLKAEPVVRTFEVHTSTGHKITAGKAA*
Ga0137376_115528732	3300012208	Vadose Zone Soil	LVSDADSNRVLALSFWKSREDAERYQREQYNSVRETLQSVLEAEPVVRTFEVHSSTGHKITAGKAA*
Ga0137379_100062881	3300012209	Vadose Zone Soil	KQAGFVDEIVLVSDADSDRVLALSFWKTREDAERYQREQYSSVRETMQSLLEAEPVVRTFEVHTSTGHKITAGKAA*
Ga0137379_100138279	3300012209	Vadose Zone Soil	MKLFSSRDADSNRVLALSFWKSREDAERYQREQYNSVRDTLQPMLLQPMLEGEPVVSTFEVHTSTGHKITAGKAA*
Ga0137379_115956541	3300012209	Vadose Zone Soil	KQAGFVDEIVLVSDADSDRVLALSFWKTREDAERYQREQYNSVRETMQSVLEADPVVGTFEVHTSTGHKIAAGKAA*
Ga0137378_101476451	3300012210	Vadose Zone Soil	INDKIVPILKKQTGFVDEIVLVSDADSNRVLALSFWKTRENAERYQREQYNSVRDTLQSLLEAEPVVRTFELNTSTGHKITAGKAA*
Ga0137377_100043331	3300012211	Vadose Zone Soil	NDKIVPILKKQAGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYSSVRETMQSLLEAEPVVRTFEVHTSTGHKITAGKAA*
Ga0137370_102321402	3300012285	Vadose Zone Soil	VPILKKQPGFADEIVLVSDADSNRVLALSFWNTKQDAERYQREQYHSVRDTLQSLLEAEPVVRTFEVYTSTGRKITAGKAA*
Ga0137370_102723721	3300012285	Vadose Zone Soil	KQAGFVDEIVLVSDAERDRVLALSFWKTREDAERYHREQYNTVREKLQHLIDAEPIIRTFDVHTSTGHKIAAGKAA*
Ga0137386_100591391	3300012351	Vadose Zone Soil	KQAGFVDEIVLVSDADSDRVLALSFWSKREDAERYQREQYNSVRETLQPLLQADPVVRTFEVHTSTGHKITAGKAA*
Ga0137386_101045931	3300012351	Vadose Zone Soil	QAGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYCSVRETMQSLLEAEPVVRTFEIHTSTGHKITAGKAA*
Ga0137386_101398483	3300012351	Vadose Zone Soil	VSKQGKARELSSTINDKIVPILKKQAGFVDEIVLVSDADSSRVLALSFWKARQDAERYQREQYNSVRDTLQSLLEAEPVVRTFEVHTSTGHKITAGKAA*
Ga0137386_107857203	3300012351	Vadose Zone Soil	DADSNRVLALSFWKSREDAERYQREQYNSVRDTLQPMLLQPMLEGEPVVSTFEVHTSTGHKITAGKAA*
Ga0137386_112820692	3300012351	Vadose Zone Soil	IVLVSDADSDRVLALSFWKTREDAERYQREQYNSVRETMQSVLEADPVVGTFEVHTSTGHKIAAGKAA*
Ga0137384_101343552	3300012357	Vadose Zone Soil	MVSKQGKARELSGTINDKIVPILKKQPGFADEIVLVSDADSNRVLALSFWKSREDAERYQREQYNSVRDTLQPMLLQPMLEGEPVVSTFEVHTSTGHKITAGKAA*
Ga0137360_105308511	3300012361	Vadose Zone Soil	KQGKARELSSTINDKIVPILKKQGGFEDEIVLVSNADSNRVLALSFWKSREDAERYQREQYNSVRETLQPVLEGEPVVSTFEVHTSTGHKITAGKAA*
Ga0137361_102504294	3300012362	Vadose Zone Soil	LINDKIVPILKKQAGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYSSVRETMQSLLEAEPVVRTFEVHTSTGHKITAGKAA*
Ga0137396_100434658	3300012918	Vadose Zone Soil	VEGRACDAKQGKARELSSTINDKIVPILKKQAGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYNSVRETMQSVLEVDPVLRTFE
Ga0137396_103118121	3300012918	Vadose Zone Soil	VPILKKQAGFVDEIVLVSDADSDRVLALSFWSKREDAERYQREQYNRVRETLQPLLQADPVVRTFEVHTSTGHKITAGKAA*
Ga0137359_108288891	3300012923	Vadose Zone Soil	VVELLSKQGKARELSSTINDKIVPILKKQGGFEDEIVLVSDADSNRVLALSFWKSREDAERYQREQYNSVRETLQPLLEAEPVVRTFEVHTSTGHRITAGKAA*
Ga0137407_100876985	3300012930	Vadose Zone Soil	MFTRVVELVSKQGKARELSSTINDKIVPILKKQSGFADEIVLVADADSNRVLALSFWKTREDAERYQREQYNGVRETLQPLLEAEPVVRTFEVHTSTGHRITAGK
Ga0137407_106409771	3300012930	Vadose Zone Soil	VPILKKQAGFVDEIVLVSDADSDRVLALSFWKTREDAERYQREQYNSVRETMQSLLEADPVVRTFEVHTSTGHKIAAGKAA*
Ga0137407_111400041	3300012930	Vadose Zone Soil	DADSNRVLALSFWKTREDAERYQREQYNSVRETLQPLLEGEPVVRTFEVHTSTGHKITAGKAA*
Ga0164302_104786461	3300012961	Soil	MFTRVVELISKQGKARELSSTINDKIVPILKKQAGLLDETVLVSNADFNRVLALSFWKTREDAERYQREQYNSVRETLQPLLEGEPVVRTFEVHTSTGHKITAGKAA*
Ga0134110_100023074	3300012975	Grasslands Soil	VDEIVLVSDAERDRLLALSFWKTREDAERYHREQYNTVREKLQHLIDAEPVIRTFDVHTSTGHKIAAGKAA*
Ga0134110_104057991	3300012975	Grasslands Soil	TRVVELTSKPRKSRELSSLINDKIVPILKKQAGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYSSVRETMQSLLKAEPVVRTFEVHTSTGHKITAGKAA*
Ga0134075_105224071	3300014154	Grasslands Soil	MFTRVVELVSKQGKARELSSTINDKIVPILKKQPGFADEIVLVADADSNRVLALSFWKTRENAERYQREQYNSVRDTLQSLLEAEPVVRTFEVHTSTGHKITAGKAA*
Ga0134078_102759292	3300014157	Grasslands Soil	MFTRVVELVSKQGKARERSSTINDKIVPILKKQPGFADEIVLVADADSNRVLALSFWKTREDAERYQREQYNSVRETLQPLPPEPVVRTFEVHTSTGHRITAGKAA*
Ga0134069_10357412	3300017654	Grasslands Soil	VDEIVLVSDAERDRVLALSFWKTREDADRYHQEQYNTVREKLQHLIDAEPVIRTFDVHTSTGHKIAAGKAA
Ga0134069_11987621	3300017654	Grasslands Soil	MFTRVVELISKQGKARELSSTINDKIVPILKKQAGFVDEIILVSDADSNRVLALSFWKTREDAERYQREQYNSVRETLQPLLEAEPVVRAFEVHTS
Ga0184605_101267121	3300018027	Groundwater Sediment	AGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYNSVRETLQYLLEAEPVVRTFDVHTSTGHKITAGKAA
Ga0184605_102569101	3300018027	Groundwater Sediment	KIVPILKKQAGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYKSVRETLQPALEAEPVVRTFEVHTSTGHKIAAGKAA
Ga0066662_101215791	3300018468	Grasslands Soil	SLINDTIVPILKKQAGFVDEIVLVSDADSDRVLALSFWSKREDAERYQWEQYDSVRETLQPLLQADPVVRTFEVHTSTGHKITAGKAA
Ga0066662_113145342	3300018468	Grasslands Soil	MFTRVVELVSKQGKARELSSTINDKIVPILKQQAGFVYEIVLVSDADSNRVLALNFWKARQDAERYQREQYNSVRDTLQSLLEAEPVVRTFEVHTSTGHKITAGKAA
Ga0066662_127042642	3300018468	Grasslands Soil	VVELVSKQGKARELSSTINDKIVPILKKQPGFADEIVLVADADSNRVLALSFWKTREDAEHYQREQYNSVRETLQPLLEAEPVVRTFEVHTSTGHRITAGKAA
Ga0066669_102056982	3300018482	Grasslands Soil	MFTRVVELVSKQGKARECSSTINDKIVPILKKQPGFADEIVLVADADSNRVLALSFWKTREDAERYQREQYNSVRETLQPLLEAEPVVRTFEVHTSTGHRITAGKAA
Ga0184641_13504611	3300019254	Groundwater Sediment	VDEIVLVSDADSNRVLALSFWKTREDAERYQREQYNSVRETLQSLLEAEPVVRTFEVHTSTGHKITAGKAA
Ga0184642_15909121	3300019279	Groundwater Sediment	QRQARELSSTINDKIVPILKQQAGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYNSVRETLQPVLDAEPVVRTFEVHTSTGHKITAGKAA
Ga0137408_12815942	3300019789	Vadose Zone Soil	KAVPILKKQQGFIDEMVLVSNVEPDRLLALSFWKTREDAERYHREQYPKISEMLQPVLKTEPNIRTFDVHTSTGHKIAAGKAA
Ga0193735_10621081	3300020006	Soil	KQTGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYKSVRETLQPALEAEPVVRTFEVHTSTGHKIAAGKAA
Ga0193732_10229161	3300020012	Soil	VDEIVLVSDADSDRVLALSFWKTREDAERYQREQYNSVRETMQSVLEVDPVVRTFEVHTSTGHKITAGKAA
Ga0193721_10601181	3300020018	Soil	VDEIVLVSDADSNRVLALSFWKTREDAERYQREQYNSVRETLQYLLEAEPVVRTFDVHTSTGHKITAGKAA
Ga0193721_10612023	3300020018	Soil	EMILVSDADSNRVLALSFWNTRQDAERYQREQYNSVRDTLQALLEAEPVVRTFEVHTSTGHKITAGKAA
Ga0222622_110111162	3300022756	Groundwater Sediment	MFTRVVELVSKQGRSRELSSTINDKIVPILKKQLGFVDEILLVSDADSNRVLALSFWKTREDAERYQREQYNSVRETLQPLLEAEPVVRTFEVHTSTGHKITAGKAA
Ga0207684_1000928613	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	EIVLVSDADSNCVLALSFWKTREDAERYQREQYSSVRETMQSLLEAEPVVRTFEVHTSTGHKITPGKAA
Ga0207646_1000319419	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MFTGVVELTSKPCKSRELSSLINDTIVPILKKQAGFVDEIVLVSDADSDRVLALSFWKTREDAERYQREQYSSVRETMQSLLEAEPVVRTFEVHTSTGHKITPGKAA
Ga0209350_11047331	3300026277	Grasslands Soil	PEKQPGFVDEIVLVSDADSNRVLALSFWKTSEDAERYQREQYNSVRATLQSLLEAEPVVRTFEVHTSTGHKITAGKAA
Ga0209238_10246101	3300026301	Grasslands Soil	GFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYNSVRETLQPVLDAEPVVRTFEVHTSTGHKITAGKAA
Ga0209468_10722983	3300026306	Soil	KQAGFVDEIVLVSDAERDRVLALSFWKTREDADRYHQEQYNTVREKLQHLIDAEPVIRTFDVHTSTGHKIAAGKAA
Ga0209469_11328541	3300026307	Soil	FVDEIVLVSDAERDRVLALSSWKTREDAERYHREQYNTVREKLQHLIDAEPVIRTFDVHTSTGHKIAAGKAA
Ga0209055_11927401	3300026309	Soil	VSDADSNRVLALSFWKTSEDAERYQREQYNSVRATLQSLLEAEPVVRTFEVHTSTGHKITAGKAA
Ga0209239_10121906	3300026310	Grasslands Soil	DKIVPILKKQPGFADEIVLVADADSNRVLALSFWKTREDAERYQREQYNSVRETLQPLLEAEPVVRTFEVHTSTGHRINAGKAA
Ga0209686_10873161	3300026315	Soil	PILKKQGGFEDEIVLVSDADSNRVLALSFWKSREDAERYQREQYNSVRETLQPVLEGEPVVSTFEVHTSTGHKITAGKAA
Ga0209154_11293511	3300026317	Soil	EQVVPMLKKQAGFVDEIVLVSDAERDRVLALSFWKTREDAERYHREQYNTVREKLQHLIDAEPVIRTFDVHTSTGHKIAAGKAA
Ga0209471_10260736	3300026318	Soil	LKKQAGFVDEIVLVSDADSDRVLALSFWSKREDAERYQREQYDSVRETLQPLLQADPVVRTFEVHTSTGHKITAGKAA
Ga0209801_12265252	3300026326	Soil	MFTRVVELTSKPRKSRELSSLINDKIVPILKKQARFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYSSVRETMQSLLKAEPVVRTFEVHTSTGHKITAGKAA
Ga0209804_10764921	3300026335	Soil	GGFEDEIVLVSDADSNRVLALSFWKSREDAERYQREQYNSVRETLQPVLEGEPVVSTFEVHTSTGHKITAGKAA
Ga0257166_10477472	3300026358	Soil	ASMFTRVVELVSRQRKARELSSTISDKIVPILKKQPGFADEIVLVSDADSNRVLALSFWNTRQDAERYQRQQYKSVRDTLQSLLEAEPVVRTFEVHTSTGHKITAGKAA
Ga0257181_10222311	3300026499	Soil	EIVLVSDADSDRVLALSFWNKREDAERYQREQYKSVHETLQPLLEAEPVVRTFEIHTSTGHKITAGKAA
Ga0209378_10910133	3300026528	Soil	IVPILKKQPGFVDEIVLVSDADSNRVLALNFWKARQDAERYQREQYNSVRDTLQSLLEAEPVVRTFEVHTSTGHKITAGKAA
Ga0209807_12498821	3300026530	Soil	ERDRVLALSFWKTREDAERYHREQYNTVREKLQHLIDAEPVIRTFDVHTSTGHKIAAGKA
Ga0209056_1002426010	3300026538	Soil	RVVELTSKPRKSRELSSLINDKIVPILKKQAGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYSSVRETMQSLLKAEPVVRTFEVHTSTGHKITAGKAA
Ga0209805_10120941	3300026542	Soil	LKKQKGFVDEIVLVSDEEGDRVLALSFWKTSEDAERYQREQYNNVRETIQPLLEAEPVIRTFDVHTSTGHKIAAGKAA
Ga0209805_11444121	3300026542	Soil	LKKQKGFVDEIVLVSDEEGDRVLALSFWKTSEDAERYQREQYDNVRETIQPLLEAEPVIRTFDVHTSTGHKIAAGKAA
Ga0209805_13980542	3300026542	Soil	ELTSKPRKSRELSSLINDKIVPILKKQAGFVDEIVLVSDADSDRVLALSFWKTREDAERYQRGQYNSVRETLQPVLETEPVVRTFEVHTSTGHRIAAGKAA
Ga0209577_1003323610	3300026552	Soil	VDEIVLVSDAKRDRVLALSFWKTREDAERYHREQYNTVREKLQHLIDAEPVIRTFDVHTSTGHKIAAGKAA
Ga0209577_100412631	3300026552	Soil	PILKKQAGFVYEIVLVSDADSNRVLALNFWKARQDAERYQREQYNSVRDTLQSLLEAEPVVRTFEVHTSTGHKITAGKAA
Ga0257175_10629242	3300028673	Soil	QAGFVDEIVLVSDADSNRVLALSFWKARQDAERYQREQYKSVRDTLQSLLEAEPVVRTFEVHTSTGHKITAGKAA
Ga0307312_108524132	3300028828	Soil	MFTRVVELISKQGKARELSSTINDKIVPILKKQAWFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYNSVRETLQPLLEGEPVVRTFEVHTSTGHKITAG
Ga0265747_1109052	3300031044	Soil	TSKPGKAKELSNAINEKALPILQKLGGFVDEILLVSDAEPDRVLALSFWKARDDAERYHREQYKNLAESLRYLFAAEPLIRTFDMQTSSGRKIVAGRAA
Ga0308197_101412091	3300031093	Soil	ILKKQPGFVDEIVLVSDADSNRVLAISFWKTREDTERYQREQYNSVRETLQPVLDAEPVVRTFEVHTSTGHKITAGKAA
Ga0308193_10364652	3300031096	Soil	EIVLVSDADSDRVLALSFWKTREDAERYQREQYNSVRETMQSVLETEPVVRTFEVHTSTGHKIAAGKAA
Ga0307469_100214163	3300031720	Hardwood Forest Soil	VDEIVLVSDADSDRVLALSFWNKREDAERYQREQYNNVRETLQPMLEAEPVVRTFEVHTSTEHKITAGKAA
Ga0307469_106533963	3300031720	Hardwood Forest Soil	TSKPRKSRELSSLINDKIVPILKKQAGFVDEIVLVSDADSDRVLALSFWSKREDAERYQREQYNSVRDTLQPLLEGEPVVRTFEVHTSTTHKITSGKAA
Ga0307469_109153101	3300031720	Hardwood Forest Soil	STINDKIVPILKKQAGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYNSVRETLQPLLEGEPVVRTFEVHTSTGHKITAGKAA
Ga0307469_110077232	3300031720	Hardwood Forest Soil	ARELSSTINDKIVPILKKQAGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYKSVQETLQPVLEAEPVVRTFEVHTSTGHKIAAGKAA
Ga0316033_1082971	3300031872	Soil	INEKALPILQKLGGFVDEILLVSDAEPDRVLALSFWKARDDAERYHREQYKNLAESLRYLFAAEPLIRTFDMQTSSGRKIVAGRAA
Ga0307472_1027882761	3300032205	Hardwood Forest Soil	IHEKGVPILKKQRGFVDEIVLVSHADPNRVLALSFWNKQEDAEQYQREQYQKIHDTLRHLLQAEPEVRTFDVHTSIGHKITAEKAA
Ga0370546_082446_2_256	3300034681	Soil	DKIVPILKKQAGFVDEIVLVSDADSNRVLALSFWKTREDAERYQREQYPKIQETLKHLLETEPVVRTLEVHTSTGHKIAAGKAA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053188

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign