Metagenome / Metatranscriptome Family F053211

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053211
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	103 residues
Representative Sequence	MRGSVTAVIALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRAAAEIQQQDREQTVVRDLTRPAPRPPQADQDLKGGIQTRSLNNALRR
Number of Associated Samples	121
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	75.20 %
% of genes near scaffold ends (potentially truncated)	24.11 %
% of genes from short scaffolds (< 2000 bps)	60.28 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.652 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (24.113 % of family members)
Environment Ontology (ENVO)	Unclassified (52.482 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.411 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 47.01% β-sheet: 0.00% Coil/Unstructured: 52.99%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF04536	TPM_phosphatase	23.40
PF01168	Ala_racemase_N	15.60
PF00266	Aminotran_5	9.93
PF14031	D-ser_dehydrat	5.67
PF00248	Aldo_ket_red	4.26
PF01575	MaoC_dehydratas	3.55
PF02771	Acyl-CoA_dh_N	2.84
PF04011	LemA	1.42
PF07885	Ion_trans_2	1.42
PF16363	GDP_Man_Dehyd	0.71
PF13529	Peptidase_C39_2	0.71
PF14559	TPR_19	0.71
PF00082	Peptidase_S8	0.71
PF02515	CoA_transf_3	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	2.84
COG1704	Magnetosome formation protein MamQ, lipoprotein antigen LemA family	Cell wall/membrane/envelope biogenesis [M]	1.42
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.65 %
Unclassified	root	N/A	11.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.65 %
Unclassified	root	N/A	11.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.65 %
Unclassified	root	N/A	11.35 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	40.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	18.44 %
Unclassified	root	N/A	11.35 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	40.43 %
Unclassified	root	N/A	11.35 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	40.43 %
Unclassified	root	N/A	11.35 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	39.01 %
Unclassified	root	N/A	11.35 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	39.01 %
Unclassified	root	N/A	11.35 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10008349	All Organisms → cellular organisms → Bacteria	3675	Open in IMG/M
3300002560\|JGI25383J37093_10007681	All Organisms → cellular organisms → Bacteria → Proteobacteria	3486	Open in IMG/M
3300002561\|JGI25384J37096_10007632	All Organisms → cellular organisms → Bacteria → Proteobacteria	4033	Open in IMG/M
3300002562\|JGI25382J37095_10040979	All Organisms → cellular organisms → Bacteria	1808	Open in IMG/M
3300002908\|JGI25382J43887_10006212	All Organisms → cellular organisms → Bacteria → Proteobacteria	5776	Open in IMG/M
3300002912\|JGI25386J43895_10020274	All Organisms → cellular organisms → Bacteria → Proteobacteria	1952	Open in IMG/M
3300003203\|JGI25406J46586_10045969	All Organisms → cellular organisms → Bacteria → Proteobacteria	1499	Open in IMG/M
3300005166\|Ga0066674_10000628	All Organisms → cellular organisms → Bacteria	11260	Open in IMG/M
3300005166\|Ga0066674_10055650	All Organisms → cellular organisms → Bacteria → Proteobacteria	1792	Open in IMG/M
3300005171\|Ga0066677_10231169	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300005175\|Ga0066673_10006842	All Organisms → cellular organisms → Bacteria	4667	Open in IMG/M
3300005181\|Ga0066678_10145426	All Organisms → cellular organisms → Bacteria	1478	Open in IMG/M
3300005186\|Ga0066676_10007651	All Organisms → cellular organisms → Bacteria	5151	Open in IMG/M
3300005440\|Ga0070705_100311033	All Organisms → cellular organisms → Bacteria → Proteobacteria	1133	Open in IMG/M
3300005445\|Ga0070708_100245530	All Organisms → cellular organisms → Bacteria	1681	Open in IMG/M
3300005454\|Ga0066687_10208294	All Organisms → cellular organisms → Bacteria → Proteobacteria	1071	Open in IMG/M
3300005467\|Ga0070706_101948711	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	533	Open in IMG/M
3300005546\|Ga0070696_101161204	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	651	Open in IMG/M
3300005552\|Ga0066701_10061752	All Organisms → cellular organisms → Bacteria → Proteobacteria	2095	Open in IMG/M
3300005559\|Ga0066700_10007635	All Organisms → cellular organisms → Bacteria → Proteobacteria	5398	Open in IMG/M
3300005559\|Ga0066700_10684955	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	705	Open in IMG/M
3300005561\|Ga0066699_10167738	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1510	Open in IMG/M
3300005561\|Ga0066699_10380609	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300005568\|Ga0066703_10400552	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	824	Open in IMG/M
3300005569\|Ga0066705_10430330	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300005569\|Ga0066705_10476856	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	782	Open in IMG/M
3300005576\|Ga0066708_10150337	All Organisms → cellular organisms → Bacteria	1430	Open in IMG/M
3300005586\|Ga0066691_10143714	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300005985\|Ga0081539_10000069	All Organisms → cellular organisms → Bacteria	236854	Open in IMG/M
3300006031\|Ga0066651_10049070	All Organisms → cellular organisms → Bacteria → Proteobacteria	1968	Open in IMG/M
3300006031\|Ga0066651_10083437	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300006755\|Ga0079222_10091093	All Organisms → cellular organisms → Bacteria → Proteobacteria	1571	Open in IMG/M
3300006791\|Ga0066653_10101582	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300006796\|Ga0066665_10039382	All Organisms → cellular organisms → Bacteria	3177	Open in IMG/M
3300006844\|Ga0075428_100129408	All Organisms → cellular organisms → Bacteria	2747	Open in IMG/M
3300006844\|Ga0075428_100301025	All Organisms → cellular organisms → Bacteria → Proteobacteria	1724	Open in IMG/M
3300006845\|Ga0075421_100672591	All Organisms → cellular organisms → Bacteria → Proteobacteria	1207	Open in IMG/M
3300006854\|Ga0075425_100663945	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300006914\|Ga0075436_101093910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	600	Open in IMG/M
3300006954\|Ga0079219_10022699	All Organisms → cellular organisms → Bacteria → Proteobacteria	2352	Open in IMG/M
3300007255\|Ga0099791_10156103	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1067	Open in IMG/M
3300009012\|Ga0066710_103774007	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	569	Open in IMG/M
3300009094\|Ga0111539_11108143	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	920	Open in IMG/M
3300009137\|Ga0066709_100581571	All Organisms → cellular organisms → Bacteria	1592	Open in IMG/M
3300010047\|Ga0126382_11107298	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	702	Open in IMG/M
3300010109\|Ga0127497_1038967	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	563	Open in IMG/M
3300010111\|Ga0127491_1118470	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	530	Open in IMG/M
3300010124\|Ga0127498_1015283	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	555	Open in IMG/M
3300010127\|Ga0127489_1030007	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	538	Open in IMG/M
3300010133\|Ga0127459_1061994	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	594	Open in IMG/M
3300010141\|Ga0127499_1166711	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	788	Open in IMG/M
3300010320\|Ga0134109_10297451	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	621	Open in IMG/M
3300010321\|Ga0134067_10357738	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	576	Open in IMG/M
3300010322\|Ga0134084_10302624	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	595	Open in IMG/M
3300010329\|Ga0134111_10110357	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1062	Open in IMG/M
3300010335\|Ga0134063_10019034	All Organisms → cellular organisms → Bacteria	2821	Open in IMG/M
3300010362\|Ga0126377_11227271	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	821	Open in IMG/M
3300012203\|Ga0137399_10097977	All Organisms → cellular organisms → Bacteria	2262	Open in IMG/M
3300012205\|Ga0137362_10470850	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300012208\|Ga0137376_10641948	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	917	Open in IMG/M
3300012285\|Ga0137370_10234470	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1084	Open in IMG/M
3300012356\|Ga0137371_11454872	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	500	Open in IMG/M
3300012362\|Ga0137361_10042163	All Organisms → cellular organisms → Bacteria	3710	Open in IMG/M
3300012362\|Ga0137361_10127675	All Organisms → cellular organisms → Bacteria	2248	Open in IMG/M
3300012379\|Ga0134058_1123818	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	528	Open in IMG/M
3300012390\|Ga0134054_1176129	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	714	Open in IMG/M
3300012396\|Ga0134057_1306111	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	618	Open in IMG/M
3300012399\|Ga0134061_1146894	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	628	Open in IMG/M
3300012400\|Ga0134048_1303663	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1106	Open in IMG/M
3300012582\|Ga0137358_10180400	All Organisms → cellular organisms → Bacteria	1440	Open in IMG/M
3300012582\|Ga0137358_10562651	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	766	Open in IMG/M
3300012685\|Ga0137397_10036515	All Organisms → cellular organisms → Bacteria	3514	Open in IMG/M
3300012918\|Ga0137396_10249700	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300012918\|Ga0137396_10986650	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	611	Open in IMG/M
3300012918\|Ga0137396_11102702	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	567	Open in IMG/M
3300012922\|Ga0137394_11124631	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	649	Open in IMG/M
3300012923\|Ga0137359_10750669	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	848	Open in IMG/M
3300012925\|Ga0137419_10317641	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1196	Open in IMG/M
3300012929\|Ga0137404_10002345	All Organisms → cellular organisms → Bacteria	12506	Open in IMG/M
3300012976\|Ga0134076_10004493	All Organisms → cellular organisms → Bacteria	4521	Open in IMG/M
3300014150\|Ga0134081_10358539	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	537	Open in IMG/M
3300015054\|Ga0137420_1432691	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1344	Open in IMG/M
3300015264\|Ga0137403_11019611	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	674	Open in IMG/M
3300015356\|Ga0134073_10290038	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	580	Open in IMG/M
3300015359\|Ga0134085_10244787	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	779	Open in IMG/M
3300015371\|Ga0132258_10281937	All Organisms → cellular organisms → Bacteria → Proteobacteria	4077	Open in IMG/M
3300017656\|Ga0134112_10000072	All Organisms → cellular organisms → Bacteria → Proteobacteria	20016	Open in IMG/M
3300017656\|Ga0134112_10007213	All Organisms → cellular organisms → Bacteria	3590	Open in IMG/M
3300018431\|Ga0066655_10001034	All Organisms → cellular organisms → Bacteria	9779	Open in IMG/M
3300018433\|Ga0066667_10045310	All Organisms → cellular organisms → Bacteria	2610	Open in IMG/M
3300020170\|Ga0179594_10148380	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	866	Open in IMG/M
3300020199\|Ga0179592_10252526	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	791	Open in IMG/M
3300025910\|Ga0207684_10039103	All Organisms → cellular organisms → Bacteria	4025	Open in IMG/M
3300026277\|Ga0209350_1020173	All Organisms → cellular organisms → Bacteria → Proteobacteria	2058	Open in IMG/M
3300026277\|Ga0209350_1138640	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300026295\|Ga0209234_1058213	All Organisms → cellular organisms → Bacteria	1470	Open in IMG/M
3300026295\|Ga0209234_1156166	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	804	Open in IMG/M
3300026297\|Ga0209237_1046900	All Organisms → cellular organisms → Bacteria → Proteobacteria	2204	Open in IMG/M
3300026298\|Ga0209236_1010733	All Organisms → cellular organisms → Bacteria → Proteobacteria	5375	Open in IMG/M
3300026298\|Ga0209236_1122892	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1142	Open in IMG/M
3300026306\|Ga0209468_1004328	All Organisms → cellular organisms → Bacteria → Proteobacteria	5613	Open in IMG/M
3300026306\|Ga0209468_1012387	All Organisms → cellular organisms → Bacteria → Proteobacteria	3148	Open in IMG/M
3300026309\|Ga0209055_1033615	All Organisms → cellular organisms → Bacteria	2322	Open in IMG/M
3300026310\|Ga0209239_1253962	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	606	Open in IMG/M
3300026312\|Ga0209153_1141894	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	904	Open in IMG/M
3300026315\|Ga0209686_1031231	All Organisms → cellular organisms → Bacteria → Proteobacteria	2045	Open in IMG/M
3300026323\|Ga0209472_1006752	All Organisms → cellular organisms → Bacteria → Proteobacteria	6041	Open in IMG/M
3300026326\|Ga0209801_1202760	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	793	Open in IMG/M
3300026327\|Ga0209266_1302376	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	503	Open in IMG/M
3300026331\|Ga0209267_1087583	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300026331\|Ga0209267_1210918	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	732	Open in IMG/M
3300026523\|Ga0209808_1002487	All Organisms → cellular organisms → Bacteria	9484	Open in IMG/M
3300026530\|Ga0209807_1001859	All Organisms → cellular organisms → Bacteria	10131	Open in IMG/M
3300026532\|Ga0209160_1298515	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	547	Open in IMG/M
3300026537\|Ga0209157_1107621	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1311	Open in IMG/M
3300026551\|Ga0209648_10012197	All Organisms → cellular organisms → Bacteria	7475	Open in IMG/M
3300026552\|Ga0209577_10652399	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	607	Open in IMG/M
3300027873\|Ga0209814_10005332	All Organisms → cellular organisms → Bacteria → Proteobacteria	4888	Open in IMG/M
3300027880\|Ga0209481_10652902	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	546	Open in IMG/M
3300028536\|Ga0137415_10008117	All Organisms → cellular organisms → Bacteria	10405	Open in IMG/M
3300031720\|Ga0307469_10766218	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	882	Open in IMG/M
3300031720\|Ga0307469_11974166	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	566	Open in IMG/M
3300032180\|Ga0307471_100874971	All Organisms → cellular organisms → Bacteria	1066	Open in IMG/M
3300033412\|Ga0310810_10001441	All Organisms → cellular organisms → Bacteria	24937	Open in IMG/M
3300034164\|Ga0364940_0236054	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	538	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.52%
Host-Associated	Host-Associated	13.48%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.52%
Plants	Host-Associated → Plants	13.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.84%
Floodplain	Environmental → Terrestrial → Floodplain	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.93%
Loam	Environmental → Terrestrial → Soil → Loam	8.51%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.42%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.71%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	37.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.13%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.13%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.42%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	24.11%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.31%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	15.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	13.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.55%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.13%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.42%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010109	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010111	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010124	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010127	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010133	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010141	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012379	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012399	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1015889842	3300000364	Soil	MRGQVVLAALIATFVPAIVLAQAASPDTETQLQQDLRHRRVIVKPLTPLSEVQRDLDRVEIEGLQQQERAAIERRLSRPVQTPPHVDDDFKGGIQTRNLNNLLGR*
JGI25385J37094_100083494	3300002558	Grasslands Soil	MRRTIAAVIALVGALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDPDLKGGIQSRSLNNVLRR*
JGI25383J37093_100076813	3300002560	Grasslands Soil	MRRXIAAVIALVGALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR*
JGI25384J37096_100076324	3300002561	Grasslands Soil	MRRNIAAVIALVGTLVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLDRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR*
JGI25382J37095_100409793	3300002562	Grasslands Soil	MRRNIAAVIALVGALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLDRAAAEIQQPARQQAIVRDLTRPAPRSPQTDPDLKGGIQSRSLNNVLRR*
JGI25382J43887_100062126	3300002908	Grasslands Soil	MRRNIAAVIALVGTLVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLDRAAAEIQQPARQQAIVRDLTRPAPRSPQTDPDLKGGIQSRSLNNVLRR*
JGI25386J43895_100202741	3300002912	Grasslands Soil	LVAALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDPDLKGGIQSRSLNNVLRR*
JGI25406J46586_100459692	3300003203	Tabebuia Heterophylla Rhizosphere	MRRQIAAVAVIVTLVPASVLAQAASPDTETQLQQEMRHRRVIVRPLTPPAEVQRDAERAAAELEQQEXGQVIARDLNRPAQRPPQVDQDLKGGIQTRSLNNLLHR*
Ga0066395_101501502	3300004633	Tropical Forest Soil	MRGQAALVALIVTLILATVLFQAASPDTETQLQQDVRHRRVIVKPTTPLSEVNRDLDRVELEAAQQQERAAIERKVSRPAQTPPHVDAEFKGGIQTRSLNNLLGK*
Ga0066674_100006285	3300005166	Soil	MRRNIAAVIALVGALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR*
Ga0066674_100556502	3300005166	Soil	MKSSVTAVVVVAAALAPAVVLAQSASTETQLQQELRHRRVIVRPVTPPDEVERDADRAVVELQQRERDQVARDLSRPAQRAPQMDQDLKGGIQTRSLNNALRR*
Ga0066677_102311692	3300005171	Soil	MRRSITAVMALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRATTEIQQHDREQTTVRDLTRPAQRPPQADEDLKGGIQTRSLNDALRR*
Ga0066673_100068422	3300005175	Soil	MRGSVTAVMALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRATAEIQQQDREQTVVRDLTRPAPRPPQADQDLKGGIQTRSLNNALRR*
Ga0066678_101454262	3300005181	Soil	MRGSVTAVMALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRATTEIQQHDREQTTVRDLTRPAQRPPQTDEDLKGGIQTRSLNDALRR*
Ga0066676_100076511	3300005186	Soil	MRAEVTAVLVLIGTLVPASVLAQTAAPGAETQLQQEMRHRRVIVRPLTPSDQVERDVDRARTEIRQQERDAAVRELSRPAQRAPQADQDLKGGIQTRSLNNALRR*
Ga0070705_1003110333	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MKGQVALVALIVTLIPATVLAQAASPDTETQLQQDLRHRRVIVRPLTPADEVQRDVDTATSEIQQQEREQAAMRDLGRPTQRPPQADQDLKGGIQTR
Ga0070708_1002455302	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MKGQVALVALIVTLIPATVLAQAASPDTETQLQQDLRHRRVIVRPLTPADEVQRDVDAAASEIQQQEREQAAMSGLTRPRQRPPQADDDLKGGIQTRSLNNLLRR*
Ga0066687_102082941	3300005454	Soil	MKSSVTAVVVVAAALAPAVVLAQSASTETQLQQELRHRRVIVRPVTPPDEVERDADRAVVELQQRERDQVARDLSRPAQRAPQLDQDL
Ga0070706_1019487111	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTGQTALVALIVTLIPATVLAQAASPDTETQLQQDLRHRRVIVRPLTPADEVQRDVDTATSEIQQQEREQAAMRDLGRPTQRPPQADQDLKGGIQTRSLNNLLRR*
Ga0070696_1011612042	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	LIGALLPGTVLAQAASPGSETQLQQELRHRRVIVRPATPTEQVQQDVDRATTIIEQQQRQDAIARDLGRPASRPPQMDDDLKGGIQTRSLNNALRR*
Ga0066701_100617521	3300005552	Soil	MRRTIAAVIALVGALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR*
Ga0066700_100076353	3300005559	Soil	MRRTIAAVIALVGALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDRVQQDLDRAAAEIQQPARQQAIVRDLTRPAPRSPQTDPDLKGGIQSRSLNNVLRR*
Ga0066700_106849551	3300005559	Soil	MKSSVTAVVVVAAALAPAVVLAQSASTETQLQQELRHRRVIVRPVTPPDEVERDADRAVVKLQQRERDQVARDLSRPAQRAPQMDQDLKGGIQTRS
Ga0066699_101677381	3300005561	Soil	MKSSVTAVVVVAAALAPAVVLAQSASTETQLQQELRHRRVIVRPVTPPDEVERDTDRAVVELQQRERDQVARDLSRPAQRAPQMDQDLKGGIQTRSLNNALRR*
Ga0066699_103806092	3300005561	Soil	MRRSITAVMALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRATAEIQQQDREQTVVRDLTRPAPRPPQADQDLKGGIQTRSLNNALRR*
Ga0066703_104005522	3300005568	Soil	MRRNIAAVIALVGALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLDRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR*
Ga0066705_104303302	3300005569	Soil	MRGSVTAVIALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRATAEIQQQDREQTVVRDLTRPAPRPPQADQDLKGGIQTRSLNNALRR*
Ga0066705_104768561	3300005569	Soil	MTSKVAAVIALLGALVPATVLAQAASPDTQLQQEMRHRRVIVRPPTPTDQVERDVDRAVAEIQERGQAVGRDLNRPAQRPPQTDQDLKGGIQTRSLNNALRR*
Ga0066708_101503372	3300005576	Soil	MRGSVTAVMALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRAAAEIQQQDREQTVVRDLTRPAPRPPQADQDLKGGIQTRSLNNALRR*
Ga0066691_101437142	3300005586	Soil	MRGSVTAVMALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRATTEIQQRDREQTTVRDLTRPAQRPPQADEDLKGGIQTRSLNDALRR*
Ga0066905_1005576072	3300005713	Tropical Forest Soil	MRGQVALVALMVTFIPATVLAQAASPDTETQLQQDLRHRRVIVKPVTPLSEVNRDLDRVELEALQQQERAAIERKLSQPAQTPPHVDDDFKGGIQTRNLNKLLGR*
Ga0081539_10000069124	3300005985	Tabebuia Heterophylla Rhizosphere	MRRQIAAVAVIVTLVPASVLAQAASPDTETQLQQEMRHRRVIVRPLTPPAEVQRDAERAAAELEQQERGQVIARDLNRPAQRPPQVDQDLKGGIQTRSLNNLLHR*
Ga0066651_100490702	3300006031	Soil	MKSSVTAVVVVAAALAPAVVLAQSASTENQLQQELRHRRVIVRPVTPPDEVERDADRAVVELQQRERDQVARDLSRPAQRAPQMDQDLKGGIQTRSLNNALRR*
Ga0066651_100834371	3300006031	Soil	MRRNIAAVIALVGALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLR
Ga0075417_105034931	3300006049	Populus Rhizosphere	MRGQAALVALIVTLIPATVLAQAASPDTETQLQQDLRHRRVIVKPTTPLSEVNRDLDRVELEGAQQQERAAIERKLSRPAQTPPHVDDDFKGGIQTRSLNNLLGK*
Ga0079222_100910933	3300006755	Agricultural Soil	IVSLGMLAPAVALAQAASPTTETELQQEMRHRRVIVRPATPPDQVERDAERAAAEIQDREREQAVARDLTRPAQRPPQSDQDLKGGIQTRRLDNLLPRR*
Ga0066653_101015823	3300006791	Soil	MRGSVTAVMALIGTLVHDTVFAQAASPTCETQLQQEMRHRRVIVRPLTPADQVQQDVDRATAEIQQQDREQTVVRDLTRPAPRPPQADQDLKGGIQTRSLDNALRR*
Ga0066665_100393823	3300006796	Soil	MRGSVTAVIALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRAAAEIQQQDREQTVVRDLTRPAPRPPQADQDLKGGIQTRSLNNALRR*
Ga0075428_1001294083	3300006844	Populus Rhizosphere	MKNDVAAVIALIGTLVPATVLAQAASVDTETQLQQQMRHRRVIVRPATPPGEVQRDADQAATEVLQQQEREQDVVRDLTRPAPRAPQADQDLKGGIQTRSLNNVLRR*
Ga0075428_1003010252	3300006844	Populus Rhizosphere	MRRQVAAVAVIVTLVPASVLAQAASPDTETQLQQEMRHRRVIVRPVTHPAEVQRDAERAAAEVEQQQSGQAIARDLNRPAQRPPQVDQDLKGGIQTRNLNNLLRR*
Ga0075421_1006725912	3300006845	Populus Rhizosphere	MRRQVAAVAVIVTLVPASVLAQAASPDTETQLQQEMRHRRVIVRPVTPPAEVQRDAERAAAEVEQQQSGQAIARDLNRPAQRPPQVDQDLKGGIQTRNLNNLLRR*
Ga0075425_1006639452	3300006854	Populus Rhizosphere	MKGQVAAVAVIVALVPASGLAQAASPETQLQQEMRHRRVIVRPITPPAEVERDVDRAAAEIEQQRAEAIAQDLNRPTQRAPQVDQDLKGGIQTRSLNNLIRR*
Ga0075425_1008146932	3300006854	Populus Rhizosphere	MRGQVVLAALIATFVPATVLAQAASPDTETQLQQDLRHRRVIVKPLTPLSEVQRDLDRVEIEGLQQQERAAIERRLSRPAQTPPHVDDDFKGGIQTRNLNNLLGR*
Ga0075434_1001055331	3300006871	Populus Rhizosphere	GQMRGQAALVALIVTLIPATVLAQAASPDTETQLQQDLRHRRVIVKPTTPLSEVNRDLDRVELEGAQQQERAAIERKLSRPAQTPPHVDDDFKGGIQTRSLNNLLGK*
Ga0075436_1010939102	3300006914	Populus Rhizosphere	VYATGGRAMRPALTVVIVSAAMVAPAIALGQAASPTTETELQQEMRHRRVIVRPPTPPDEVQRDAERAATEVQDREREQAIARDLSRPAQRPPQSDQDLKGGIQTRRLDNLLPRR*
Ga0079219_100226994	3300006954	Agricultural Soil	MRPASTAVIVSLGMLAPAVALAQAASPTTETELQQEMRHRRVIVRPATPPDQVERDAERAAAEVQDREREQAVARDLTRPAQRPPQSDQDLKGGIQTRRLDNLLPRR*
Ga0099791_101561032	3300007255	Vadose Zone Soil	MGRSVAAVVALIGMLVPATVLAQAASPTSETLLQQEMRHRRVIVRPLTPADQVQQDVDRATTEIQQQDREQAITRGLTRPAQRPPQADQDLKGGIQTRSLNDALRR*
Ga0066710_1037740072	3300009012	Grasslands Soil	MRRTIAAVITLVAALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPVTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR
Ga0111539_111081432	3300009094	Populus Rhizosphere	MKGSVTAVIVVAAALAPAVVQAQSASTETQLQQELRHRRVIVRPVTPPEEVERDADRAAVELRERERDQVVRDLSRPTQRTPQMDQDLKGGIQTRSLNNALRR*
Ga0066709_1005815712	3300009137	Grasslands Soil	MKSSVTAVVLVAAALAPAVVLAQSASTETQLQQELRHRRVIVRPVTPPDEVERDADRAVVELQQRERDQVARDLSRPAQRAPQMDQDLKGGIQTRSLNNALRR*
Ga0075423_100060817	3300009162	Populus Rhizosphere	MRGQAVLVALIVTLIPATVLAQAASPDTETQLQQDLRHRRVIVKPTTPLSEVNRDLDRVELEGAQQQERAAIERKLSRPAQTPPHVDDDFKGGIQTRSLNNLLGK*
Ga0126382_111072982	3300010047	Tropical Forest Soil	MRRQITAVVALSVTLIPGLVLAQAASPQTETQLEQEMRHRRVIVRPLTPIEEVQRDVDRATADLGQQDREQATVRDLNRPPQRAPQMDQDLKGGIQTRSLNNLLRR*
Ga0127497_10389671	3300010109	Grasslands Soil	MRRNIAAVIALVGALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPVTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR*
Ga0127491_11184701	3300010111	Grasslands Soil	RRNIAAVIALVGALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR*
Ga0127498_10152832	3300010124	Grasslands Soil	LVGALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR*
Ga0127489_10300071	3300010127	Grasslands Soil	RNIAAVIALVGALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR*
Ga0127459_10619942	3300010133	Grasslands Soil	MRRNIAAVITLVGALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR*
Ga0127499_11667112	3300010141	Grasslands Soil	NIAAVIALVGALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR*
Ga0134109_102974511	3300010320	Grasslands Soil	GSVTAVMALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRAAAEIQQQDREQTVVRDLTRPAPRPPQADQDLKGGIQTRSLNNALRR*
Ga0134067_103577382	3300010321	Grasslands Soil	MALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRAAAEIQQQDREQTVVRDLTRPAPRPPQADQDLKGGIQTRSLNNALRR*
Ga0134084_103026242	3300010322	Grasslands Soil	MKSSVTAVVVVAAALAPAVVLAQSASTETQLQQEIRHRRVIVRPVTPPDEVERDADRAVVELQQRERDQVARDLSRPAQRAPQLDQDL
Ga0134111_101103572	3300010329	Grasslands Soil	MKSSVTAVVVVAAALAPAVVLAQSASTETQLQQELRHRRVIVRPVTPPDEVERDADRAVVELQQRERDQVARDLSRPAQRAPQMDQDLKGGIQTRSWNNALRR*
Ga0134063_100190344	3300010335	Grasslands Soil	PMKSSVTAVVVVAAALAPAVVLAQSASTETQLQQELRHRRVIVRPVTPPDEVERDADRAVVELQQRERAQVARDLSRPAQRAPQMDQDLKGGIQTRSLNNALRR*
Ga0126376_100260766	3300010359	Tropical Forest Soil	MRGQAALVALILTLMPATVLAQTGSSDTETQLQQDLRHRRVIVKPVTPLSEVNRDLDRVELEALQQQERAAIERRLSRPVQTPPHVDDDFKGGIQTRSLNNLLGK*
Ga0126372_133292501	3300010360	Tropical Forest Soil	MRGQAALVALILTLMPATVLAQTGSSDTETQLQQDLRHRRVIVKPVTPLSEVNRDLDRVELEALQQQERAAIERKLSRPVQTPPHVDDDFKGGIQTRSLNNLLGK*
Ga0126377_112272712	3300010362	Tropical Forest Soil	MRRQITAVVALSVTLNPGLVLAQAASPQTETQLEQEMRHRRVIVRPLAPIEEVQRDVDRATADLGQQDREQATVRDLNRPPQRAPQTDQDLKGGIQTRSLNNLLRR*
Ga0137399_100979774	3300012203	Vadose Zone Soil	MALIGTLVPATVLAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRATTEIQQHDREQTVVRDLTRPAQRPPQADQDLKGGIQTRSLNDALRR*
Ga0137362_104708502	3300012205	Vadose Zone Soil	MGRSVAAVVALIGMLVPATVLAQAASRTSETLLQQEMRHRRVIVRPLTPADQVQQDVDRATAEIQQQDREAAITRGLTRPAPRPPQADQDLKGGIQTRSLNDALRR*
Ga0137376_106419482	3300012208	Vadose Zone Soil	MTSKVAAVIALLGALVPATVLAQAASPDTQLQQEMRHRRVIVRPPTPTDQVERDVDRAVAEIQEREQAVGRDLNRPAQRPPQTDQDLKGGIQTRSLNNALRR*
Ga0137370_102344702	3300012285	Vadose Zone Soil	SKVAAVIALLGALVPATVLAQAASPDTQLQQEMRHRRVIVRPPTPTDQVERDVDRAVAEIQEREQAVGRDLNRPAQRPPQTDQDLKGGIQTRSLNNALRR*
Ga0137371_114548721	3300012356	Vadose Zone Soil	MRRNIAAVIALVGALVPVVALAQAAGPGRETQLQQEMRHRRVIVRPLTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR*
Ga0137361_100421632	3300012362	Vadose Zone Soil	MRRNIAAVIALVGTLVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLDRAAVEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR*
Ga0137361_101276753	3300012362	Vadose Zone Soil	MGRSVAAVVALIGMLVPATVLAQAASPTSETLLQQEMRHRRVIVRPLTPADQVQQDVDRATAEIQQQDREQTVVRDLTRPAPRPPQADQDLKGGIQTRSLNNALRR*
Ga0134058_11238182	3300012379	Grasslands Soil	IAAVIALVGALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR*
Ga0134054_11761291	3300012390	Grasslands Soil	MRRNIAAVIALVGALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPPDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR*
Ga0134057_13061112	3300012396	Grasslands Soil	ALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR*
Ga0134061_11468941	3300012399	Grasslands Soil	MRRNVTAVIALVGMLVPAAALAQAASPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR*
Ga0134048_13036632	3300012400	Grasslands Soil	MRRNIAAVIALVGALVPVVALAQAAGPGRDMQLQQEMRHRRVIVRPLTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR*
Ga0137358_101804002	3300012582	Vadose Zone Soil	MRGRVAAVVALIGMLIPATVLAQAASPTSETLLQQEMRHRRVIVRPLTPADQVQQDADRATAEIQQQDREQAITRGLTRPAPRPPQADQDLKGGIQTRSLNDALRR*
Ga0137358_105626512	3300012582	Vadose Zone Soil	MALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRATAEIQQQDREQTVVRDLTRPASRPPQADQDLKGGIQTRSLNNALRR*
Ga0137397_100365153	3300012685	Vadose Zone Soil	MRGRVAAVVALIGMLVPATVLAQAASPTSETLLQQEMRHRRVIVRPLTPADQVQQDADRATAEIQQQDREQAITRGLTRPAPRPPQADQDLKGGIQTRSLNDALRR*
Ga0137396_102497002	3300012918	Vadose Zone Soil	MRRNVTAVIALVGTLVPAAVLAQAASPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDVDRAAAEIQQQREQAIVRDLTRPAPRSPQMDPDLKGGIQSRNLNNVLRR*
Ga0137396_109866502	3300012918	Vadose Zone Soil	MALIGTLVPATVLAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRATTEIQQHDREQAVVRDLTRPAQRPPQADQDLKGGIQTRSLNDALRR*
Ga0137396_111027021	3300012918	Vadose Zone Soil	KESPMGRSVAAVVALIGMLVPATVLAQAASPTSETLLQQEMRHRRVIVRPLTPADQVQQDVDRATTEIQQQDREQAITRGLTRPAQRPPQADQDLKGGIQTRSLNDALRR*
Ga0137394_111246312	3300012922	Vadose Zone Soil	MRGRVAAVVALIGMLTPATVLAQAASPTSETLLQQEMRHRRVIVRPPTPADQVQQDVDRATTEIQQQHREQAITRGLTRPAQRPPQADQDLKGGI
Ga0137359_107506692	3300012923	Vadose Zone Soil	MGRSVAAVVALIGMLVPATVLAQAASPTSETLLQQEMRHRRVIVRPLTPADQVQQDVDRATTEIQQQDREQTVVRDLTRPAPRPPQADQDLKGGIQTRSLNDALRR*
Ga0137419_103176412	3300012925	Vadose Zone Soil	MALIGTLVPATVLAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRATTEIQQHDREQTVVRDLTRPAQRPPQADQDLKGGIQTRSLHDALRR*
Ga0137404_100023454	3300012929	Vadose Zone Soil	MKRNVTVMIVLVGTLVPATALAQAASPGRDTQLQQEMRHRRVIVRPLTPADQARQDVDRAAAEIQQQEREQAIVRDLSRPPQRSPQADPDLKGGIQTRSLNNALRR*
Ga0126369_114858811	3300012971	Tropical Forest Soil	MKEHVALVALIGTLLPATVLAQAASPDTETQLQQELRHRRAIVKPLTPTSEVQRDLDRVELESLQQQERAAIERKLTRPVQTPPQVDDDLKGGIQTRNLNNLL
Ga0134076_100044935	3300012976	Grasslands Soil	MRAEVTAVLVLIGTLVPASVLAQTGAPGAETQLQQEMRHRRVIVRPLTPSDQVERDVDRARTEIRQQERDAAVRELSRPAQRAPQADQDLKGGIQTRSLNNALRR*
Ga0134081_103585392	3300014150	Grasslands Soil	MKSSVTAVVVVAAALAPAVVLAQSASTETQLQQELRHRRVIVRPVTPPDEVERDADRAVVELQQRERDQVARDLSRPAQRAPQ
Ga0137420_14326913	3300015054	Vadose Zone Soil	MGRSVAAVVALIGMLVPATVLAQAASPTSETLLQQEMRHRRVIVRPPTPADQVQQDVDRATTEIQQQDREQAITRGLTRPAQRPPQADQDLKGGIQTRSLNDALRR*
Ga0137403_110196111	3300015264	Vadose Zone Soil	MRRNIAAVIALVGTLVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLNRATAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR*
Ga0134073_102900381	3300015356	Grasslands Soil	MKSSVTAVVVVAAALAPAVVLAQSASTETQLQQELRHRRVIVRPVTPPDEVERDADRAVVELQQRERDQVARDLSRPAQRAPQMDQDLKGGIQTRSLSNALRR*
Ga0134085_102447871	3300015359	Grasslands Soil	AALAPAVVLAQSASTETQLQQELRHRRVIVRPVTPPDEVERDADRAVVELQQRERDQVARDLSRPAQRAPQMDQDLKGGIQTRSLNNALRR*
Ga0132258_102819374	3300015371	Arabidopsis Rhizosphere	MRTLGITAVIGVCATLMPVVAPATVLAQSASPETEMQQEMRHRRIIVRPAVPPEQVARDTEDAAAEIQRQRDDAAARELTRPTQRAPQVDQDLKGGIQTRNLNNAVRR*
Ga0132258_115477182	3300015371	Arabidopsis Rhizosphere	MRGQAALVALIVTLIPATVLGQAASPDTETQLQQDLRHRRVIVKPTTPLSEVNRDLDRVELEGAQQQERAAIERKLSRPAQTPPHVDDDFKGGIQTRSLNNLLGK*
Ga0132256_1022652182	3300015372	Arabidopsis Rhizosphere	ALVALIVTLLPATVLAQAASPDTETQLQQDLRHRRVIVKPTTPLSEVNRDLDRVELEGAQQQERAAIERKLSRPAQTPPHVDDDFKGGIQTRSLNNLLGK*
Ga0134112_100000728	3300017656	Grasslands Soil	MRRNIAAVITLVGALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR
Ga0134112_100072134	3300017656	Grasslands Soil	SVLAQTAAPGAETQLQQEMRHRRVIVRPLTPSDQVERDVDRARTEIRKQERDAAVRELSRPAQRAPQADQDLKGGIQTRSLNNALRR
Ga0066655_100010347	3300018431	Grasslands Soil	MRRNIAAVIALVGALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR
Ga0066667_100453102	3300018433	Grasslands Soil	MRGSVTAVMALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRATAEIQQQDREQTVVRDLTRPAPRPPQADQDLKGGIQTRSLNNALRR
Ga0179594_101483801	3300020170	Vadose Zone Soil	MRAEVTAVLVLIGTLVPASVLAQTAAPGAETQLQQEMRHRRVIVRPLTPSDQVERDVDRARTEIRQQERDAAVRELSRPAQRAPQADQDLKGGIQTRSLNNALRR
Ga0179592_102525262	3300020199	Vadose Zone Soil	MGRSVAAVVALIGMLVPATVLAQAASPTSETLLQQEMRHRRVIVRPLTPADQVQQDVDRATTEIQQQDREQAITRGLTRPAQRPPQADQDLKGGIQTRSLNDALRR
Ga0207684_100391035	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKGQVALVALIVTLIPATVLAQAASPDTETQLQQDLRHRRVIVRPLTPADEVQRDVDAAASEIQQQEREQAAMSGLTRPRQRPPQADDDLKGGIQTRSLNNLLRR
Ga0207646_117636052	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKGQVALVALIVTLIPATVLAQAASPDTETQLQQDLRHRRVIVRPLTPADEVQRDVDAAASEIQQQEREQAAMSGLTRPRQRPPQADDD
Ga0209350_10201731	3300026277	Grasslands Soil	MRRNIAAVIALVGTLVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLDRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR
Ga0209350_11386401	3300026277	Grasslands Soil	MRGSVTAVMALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRATAEIQQQDREQTVVRDLTRPAPRPPQADQDLKGGIQTRSLN
Ga0209234_10582132	3300026295	Grasslands Soil	MRRSITAVMALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRATAEIQQQDREQTVVRDLTRPASRPPQADQDLKGGIQTRSLNNALRR
Ga0209234_11561661	3300026295	Grasslands Soil	MKSSVTAVVVVAAALAPAVVLAQSASTETQLQQELRHRRVIVRPVTPPDEVERDADRAVVELQQRERDQVARD
Ga0209237_10469001	3300026297	Grasslands Soil	IAAVIALVGTLVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLDRAAAEIQQPARQQAIVRDLTRPAPRSPQTDPDLKGGIQSRSLNNVLRR
Ga0209236_10107331	3300026298	Grasslands Soil	MRRNIAAVIALVGTLVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLDRAAAEIQQPARQQAIVRDLTRPAPRSPQTDPDLKGGIQSRSLNNVLRR
Ga0209236_11228923	3300026298	Grasslands Soil	MRRTIAAVIALVGALVPVVALAQAAGPGRDTQLQQEMRHRRVIVRPLTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR
Ga0209468_10043283	3300026306	Soil	MRGSVTAVMALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPTDQVQQDLNRAAAEIQQPARQQAIVRDLTRPAPRSPQTDTDLKGGIQSRSLNNVLRR
Ga0209468_10123873	3300026306	Soil	MKSSVTAVVVVAAALAPAVVLAQSASTETQLQQELRHRRVIVRPVTPPDEVERDADRAVVELQQRERDQVARDLSRPAQRAPQMDQDLKGGIQTRSLNNALRR
Ga0209055_10336153	3300026309	Soil	MRRSITAVMALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRATTEIQQHDREQTTVRDLTRPAQRPPQADEDLKGGIQTRSLNDALRR
Ga0209239_12539621	3300026310	Grasslands Soil	MRRSITAVMALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRATTEIQQHDREQTTVRDLTRPAQRPPQADEDLKGGIQTRSLNDARRR
Ga0209153_11418942	3300026312	Soil	MKSSVTAVVVVAAALAPAVVLAQSASTETQLQQELRHRRVIVRPVTPPDEVERDTDRAVVELQQRERDQVARDLSRPAQRAPQMDQDLKGGIQTRSLNNALRR
Ga0209686_10312311	3300026315	Soil	ALAPAVVLAQSASTETQLQQELRHRRVIVRPVTPADEVERDADRAVVELQQRERDQVARDLSRPAQRAPQMDQDLKGGIQTRSLNNALRR
Ga0209472_10067526	3300026323	Soil	MKSSVTAVVVVAAALAPAVVLAQSASTETQLQQELRHRRVIVRPVTPPDEVERDADRAVVELQQRERDQVARDLSRPAQRAPQMDQDLKAGIQTRSLNNALRR
Ga0209801_12027602	3300026326	Soil	MKSSVTAVVVVAAALAPAVVLAQNASTETQLQQELRHRRVIVRPVTPPDEVERDTDRAVVELQMDQDLRGGIQTRSLNNALRR
Ga0209266_13023761	3300026327	Soil	MKGSVTAVVVVAAALAPAVVLAQSASTETQLQQELRHRRVIVRPVTPPDEVERDADRAVVELQQRERDQVARDLSRPAQRAPQMDQDLKGGIQTRSLNNALRR
Ga0209267_10875832	3300026331	Soil	MKSSVTAVVVVAAALAPAVVLAQSASTETQLQQELRHRRVIVRPVTPPDEVERDADRAVVELQQRERDQVARDLSRPAQRAPQMDQDLKGGIQTRS
Ga0209267_12109182	3300026331	Soil	MRGSVTAVMALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRATAEIQQHDREQTVVRDLTRPAPRPPQADQDLKGGIQTRSLNNALRR
Ga0209808_10024873	3300026523	Soil	MRGSVTAVIALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRAAAEIQQQDREQTVVRDLTRPAPRPPQADQDLKGGIQTRSLNNALRR
Ga0209807_100185910	3300026530	Soil	MRGSVTAVIALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRATAEIQQQDREQTVVRDLTRPAPRPPQADQDLKGGIQTRSLNNALRR
Ga0209160_12985152	3300026532	Soil	SVTAVMALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRATAEIQQQDREQTVVRDLTRPAPRPPQADQDLKGGIQTRSLNNALRR
Ga0209157_11076211	3300026537	Soil	RAEVTAVLVLIGTLVPASVLAQTAAPGAETQLQQEMRHRRVIVRPLTPSDQVERDVDRARTEIRQQERDAAVRELSRPAQRAPQADQDLKGGIQTRSLNNALRR
Ga0209648_1001219710	3300026551	Grasslands Soil	GRSVAAVVALIGMLVPATVLAQAASPTSETLLQQEMRHRRVIVRPLTPADQVQQDVDRATTEIQQQDREQAITRGLTRPAQRPPQADQDLKGGIQTRSLNDALRR
Ga0209577_106523991	3300026552	Soil	MRRSITAVMALIGTLVPATVFAQAASPTSETQLQQEMRHRRVIVRPLTPADQVQQDVDRATTEIQQHDREQTTVRDLTRPAQRPPQADEDLKGGIQT
Ga0209814_100053326	3300027873	Populus Rhizosphere	MRRQVAAVAVIVTLVPASVLAQAASPDTETQLQQEMRHRRVIVRPVTPPAEVQRDAERAAAEVEQQQSGQAIARDLNRPAQRPPQVDQDLKGGIQTRNLNNLLRR
Ga0209814_100853452	3300027873	Populus Rhizosphere	MRGQAALVALIVTLIPATVLAQAASPDTETQLQQDLRHRRVIVKPTTPLSEVNRDLDRVELEGAQQQERAAIERKLSRPAQTPPHVDDDFKGGIQTRSLNNLLGK
Ga0209465_103005501	3300027874	Tropical Forest Soil	MRGQAALVALIVTLILATVLFQAASPDTETQLQQDVRHRRVIVKPTTPLSEVNRDLDRVELEAAQQQERAAIERKVSRPAQTPPHVDAEFKGGIQTRSLNNLLGK
Ga0209481_106529021	3300027880	Populus Rhizosphere	MKNDVAAVIALIGTLVPATVLAQAASVDTETQLQQQMRHRRVIVRPATPPGEVQRDADQAATEVLQQQEREQDVVRDLTRPAPRAPQADQDLKGGIQTRSLNNVLRR
Ga0209382_111422121	3300027909	Populus Rhizosphere	GQAVLVALIVTLIPATVLAQAASPDTETQLQQDLRHRRVIVKPTTPLSEVNRDLDRVELEGAQQQERAAIERKLSRPAQTPPHVDDDFKGGIQTRSLNNLLGK
Ga0137415_100081172	3300028536	Vadose Zone Soil	MGRSVAAVVALIGMLVPATVLAQAASPTSETLLQQEMRHRRVIVRPLTPADQVQQDVDRATTEIQQQDREQAITRGLTRPAPRPPQADQDLKGGIQTRSLNDALRR
Ga0307469_107662181	3300031720	Hardwood Forest Soil	MRGSGTAVMALIGMLVPAAVFAQAASPTSETLLQQEMRHRRVIVRPLTPADQVQQDVDRARAEIQQQDRGQTVVRDLTRPAQRPPQADQDLKGGIQTRSLNDALRR
Ga0307469_119741662	3300031720	Hardwood Forest Soil	LIVTLIPATVLAQAASPDTETQLQQDLRHRRVIVRPLTPADEVQRDVDTAASEIQQQEREQAAMSGLTRPRQRPPQADDDLKGGIQTRSLNNLLRR
Ga0307471_1008749712	3300032180	Hardwood Forest Soil	MKANVIAVIALTVAVFPSAVLAQAASPETTLQQELRHRRVIVRPITPIDQVQQDVDQATAEVQRQQAGDSAVRDLSRPPSRQPNLDPDLKGGIQTRNLNNALRR
Ga0310810_1000144116	3300033412	Soil	MRTLSITAVIGVCAALMPVVAPATVLAQSASPETEMQQEMRHRRVIVRPAVPPEQVERDAEHAAAEIQRQRDDAAARELTRPTQRAPQVDQDLKGGIQTRNLNNAVRR
Ga0364940_0236054_100_420	3300034164	Sediment	MRLNVTAVVALIGALLPGAALAQSVGLGRETQLQQEMRHRRVIVRPGTPVERVQQDVDWATAQVERQQRRDALVRELTRSAPREPQVDADLRGGIQTRSLSNALRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053211

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences