Metagenome Family F053225

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053225
Family Type	Metagenome
Number of Sequences	141
Average Sequence Length	82 residues
Representative Sequence	MRKFTQSILGKGVTFTKLCKVRDKRGRVDYARQDIDGIVVENDGYVATIRGWDGVLHTNVETAELKTWAEADRNIEDELSCLV
Number of Associated Samples	92
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	79.29 %
% of genes near scaffold ends (potentially truncated)	25.53 %
% of genes from short scaffolds (< 2000 bps)	77.30 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.355 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (51.773 % of family members)
Environment Ontology (ENVO)	Unclassified (75.177 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (91.489 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.22% β-sheet: 36.04% Coil/Unstructured: 47.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF01592	NifU_N	0.71
PF01391	Collagen	0.71
PF13203	DUF2201_N	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
All Organisms	root	All Organisms	49.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
Viruses	superkingdom	All Organisms → Viruses	36.17 %
cellular organisms	root	All Organisms → cellular organisms	13.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.17 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	13.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.93 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.17 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.17 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	9.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	36.17 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	9.93 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002231\|KVRMV2_101418535	Not Available	855	Open in IMG/M
3300002242\|KVWGV2_10335712	All Organisms → Viruses → Predicted Viral	3140	Open in IMG/M
3300002242\|KVWGV2_10344628	All Organisms → Viruses → Predicted Viral	2026	Open in IMG/M
3300002242\|KVWGV2_10347180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1850	Open in IMG/M
3300002514\|JGI25133J35611_10004373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	6878	Open in IMG/M
3300002514\|JGI25133J35611_10029406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2066	Open in IMG/M
3300002518\|JGI25134J35505_10037964	All Organisms → Viruses → Predicted Viral	1290	Open in IMG/M
3300002519\|JGI25130J35507_1013331	All Organisms → Viruses → Predicted Viral	2015	Open in IMG/M
3300004097\|Ga0055584_101035825	Not Available	858	Open in IMG/M
3300004097\|Ga0055584_101860718	Not Available	619	Open in IMG/M
3300005427\|Ga0066851_10165983	Not Available	701	Open in IMG/M
3300005430\|Ga0066849_10090135	All Organisms → Viruses → Predicted Viral	1222	Open in IMG/M
3300005430\|Ga0066849_10112283	All Organisms → Viruses → Predicted Viral	1081	Open in IMG/M
3300006735\|Ga0098038_1050206	All Organisms → Viruses → Predicted Viral	1507	Open in IMG/M
3300006735\|Ga0098038_1103845	Not Available	978	Open in IMG/M
3300006736\|Ga0098033_1042715	All Organisms → Viruses → Predicted Viral	1345	Open in IMG/M
3300006736\|Ga0098033_1175770	Not Available	596	Open in IMG/M
3300006738\|Ga0098035_1111485	Not Available	947	Open in IMG/M
3300006750\|Ga0098058_1044502	All Organisms → Viruses → Predicted Viral	1263	Open in IMG/M
3300006750\|Ga0098058_1084403	Not Available	868	Open in IMG/M
3300006750\|Ga0098058_1105824	Not Available	758	Open in IMG/M
3300006751\|Ga0098040_1023197	Not Available	2015	Open in IMG/M
3300006751\|Ga0098040_1211671	Not Available	565	Open in IMG/M
3300006753\|Ga0098039_1170478	Not Available	741	Open in IMG/M
3300006753\|Ga0098039_1333443	Not Available	505	Open in IMG/M
3300006754\|Ga0098044_1022361	All Organisms → Viruses → Predicted Viral	2828	Open in IMG/M
3300006754\|Ga0098044_1045170	All Organisms → Viruses → Predicted Viral	1892	Open in IMG/M
3300006754\|Ga0098044_1171971	Not Available	861	Open in IMG/M
3300006789\|Ga0098054_1030083	All Organisms → Viruses → Predicted Viral	2127	Open in IMG/M
3300006793\|Ga0098055_1056407	All Organisms → Viruses → Predicted Viral	1575	Open in IMG/M
3300006793\|Ga0098055_1218578	Not Available	721	Open in IMG/M
3300006923\|Ga0098053_1012046	All Organisms → Viruses → Predicted Viral	1950	Open in IMG/M
3300006923\|Ga0098053_1018345	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1531	Open in IMG/M
3300006927\|Ga0098034_1139778	Not Available	685	Open in IMG/M
3300006928\|Ga0098041_1008820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3387	Open in IMG/M
3300006928\|Ga0098041_1017360	All Organisms → Viruses → Predicted Viral	2361	Open in IMG/M
3300006928\|Ga0098041_1018313	All Organisms → Viruses → Predicted Viral	2294	Open in IMG/M
3300006928\|Ga0098041_1100663	Not Available	933	Open in IMG/M
3300007508\|Ga0105011_1095730	All Organisms → Viruses → Predicted Viral	1164	Open in IMG/M
3300007510\|Ga0105013_1417326	Not Available	667	Open in IMG/M
3300007512\|Ga0105016_1091105	All Organisms → Viruses → Predicted Viral	1832	Open in IMG/M
3300007512\|Ga0105016_1152470	All Organisms → Viruses → Predicted Viral	1221	Open in IMG/M
3300007513\|Ga0105019_1083380	All Organisms → Viruses → Predicted Viral	1783	Open in IMG/M
3300007756\|Ga0105664_1188811	Not Available	796	Open in IMG/M
3300007770\|Ga0105015_1155084	Not Available	698	Open in IMG/M
3300007963\|Ga0110931_1058973	Not Available	1158	Open in IMG/M
3300007963\|Ga0110931_1111321	Not Available	825	Open in IMG/M
3300008050\|Ga0098052_1031468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2409	Open in IMG/M
3300008219\|Ga0114905_1203654	Not Available	637	Open in IMG/M
3300008952\|Ga0115651_1223246	All Organisms → Viruses → Predicted Viral	1242	Open in IMG/M
3300009049\|Ga0102911_1201645	Not Available	560	Open in IMG/M
3300009103\|Ga0117901_1250905	Not Available	898	Open in IMG/M
3300009126\|Ga0118723_1138605	All Organisms → Viruses → Predicted Viral	1421	Open in IMG/M
3300009129\|Ga0118728_1065419	All Organisms → Viruses → Predicted Viral	1784	Open in IMG/M
3300009129\|Ga0118728_1170310	Not Available	933	Open in IMG/M
3300009130\|Ga0118729_1068320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1877	Open in IMG/M
3300009370\|Ga0118716_1289453	Not Available	600	Open in IMG/M
3300009433\|Ga0115545_1026881	Not Available	2337	Open in IMG/M
3300009435\|Ga0115546_1071096	All Organisms → Viruses → Predicted Viral	1302	Open in IMG/M
3300009435\|Ga0115546_1144240	Not Available	842	Open in IMG/M
3300009508\|Ga0115567_10559528	Not Available	692	Open in IMG/M
3300009593\|Ga0115011_10136580	All Organisms → Viruses → Predicted Viral	1767	Open in IMG/M
3300010151\|Ga0098061_1289354	Not Available	565	Open in IMG/M
3300010155\|Ga0098047_10069710	All Organisms → Viruses → Predicted Viral	1379	Open in IMG/M
3300012920\|Ga0160423_10567593	Not Available	770	Open in IMG/M
3300013113\|Ga0171647_1049443	All Organisms → Viruses → Predicted Viral	1511	Open in IMG/M
3300013114\|Ga0171650_1036981	All Organisms → Viruses → Predicted Viral	1745	Open in IMG/M
3300017703\|Ga0181367_1043637	Not Available	795	Open in IMG/M
3300017703\|Ga0181367_1078577	Not Available	570	Open in IMG/M
3300017703\|Ga0181367_1080834	Not Available	561	Open in IMG/M
3300017703\|Ga0181367_1085767	Not Available	542	Open in IMG/M
3300017704\|Ga0181371_1004302	All Organisms → Viruses → Predicted Viral	2588	Open in IMG/M
3300017705\|Ga0181372_1005103	All Organisms → Viruses → Predicted Viral	2563	Open in IMG/M
3300017715\|Ga0181370_1008415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1338	Open in IMG/M
3300017715\|Ga0181370_1043084	Not Available	581	Open in IMG/M
3300017720\|Ga0181383_1000341	All Organisms → cellular organisms → Bacteria	13736	Open in IMG/M
3300017720\|Ga0181383_1104841	Not Available	759	Open in IMG/M
3300017750\|Ga0181405_1074090	Not Available	876	Open in IMG/M
3300017763\|Ga0181410_1078387	Not Available	978	Open in IMG/M
3300017768\|Ga0187220_1026447	All Organisms → Viruses → Predicted Viral	1746	Open in IMG/M
3300017768\|Ga0187220_1111115	Not Available	829	Open in IMG/M
3300017768\|Ga0187220_1200647	Not Available	601	Open in IMG/M
3300017768\|Ga0187220_1260221	Not Available	518	Open in IMG/M
3300017775\|Ga0181432_1012718	All Organisms → Viruses → Predicted Viral	2080	Open in IMG/M
3300017775\|Ga0181432_1019932	All Organisms → Viruses → Predicted Viral	1725	Open in IMG/M
3300017775\|Ga0181432_1028149	Not Available	1495	Open in IMG/M
3300017775\|Ga0181432_1087953	Not Available	914	Open in IMG/M
3300017776\|Ga0181394_1070670	Not Available	1147	Open in IMG/M
3300017776\|Ga0181394_1208817	Not Available	593	Open in IMG/M
3300017952\|Ga0181583_10313014	Not Available	996	Open in IMG/M
3300017956\|Ga0181580_10927084	Not Available	542	Open in IMG/M
3300017958\|Ga0181582_10725853	Not Available	596	Open in IMG/M
3300017962\|Ga0181581_10852870	Not Available	540	Open in IMG/M
3300017964\|Ga0181589_10844403	Not Available	565	Open in IMG/M
3300017967\|Ga0181590_11084133	Not Available	518	Open in IMG/M
3300018421\|Ga0181592_10460347	Not Available	887	Open in IMG/M
3300018423\|Ga0181593_10150676	Not Available	1869	Open in IMG/M
3300020348\|Ga0211600_1071533	Not Available	806	Open in IMG/M
3300020355\|Ga0211598_1027317	All Organisms → Viruses → Predicted Viral	1530	Open in IMG/M
3300020404\|Ga0211659_10045469	All Organisms → Viruses → Predicted Viral	2090	Open in IMG/M
3300020410\|Ga0211699_10001863	All Organisms → cellular organisms → Bacteria	10560	Open in IMG/M
3300020438\|Ga0211576_10028834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	3298	Open in IMG/M
(restricted) 3300023112\|Ga0233411_10039281	All Organisms → Viruses → Predicted Viral	1457	Open in IMG/M
(restricted) 3300023112\|Ga0233411_10084972	All Organisms → Viruses → Predicted Viral	1006	Open in IMG/M
(restricted) 3300023210\|Ga0233412_10142858	All Organisms → Viruses → Predicted Viral	1022	Open in IMG/M
3300025072\|Ga0208920_1003146	All Organisms → Viruses → Predicted Viral	3999	Open in IMG/M
3300025072\|Ga0208920_1039643	Not Available	962	Open in IMG/M
3300025082\|Ga0208156_1079486	Not Available	614	Open in IMG/M
3300025096\|Ga0208011_1048199	Not Available	994	Open in IMG/M
3300025102\|Ga0208666_1078164	Not Available	857	Open in IMG/M
3300025103\|Ga0208013_1008806	All Organisms → Viruses → Predicted Viral	3328	Open in IMG/M
3300025110\|Ga0208158_1009147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2739	Open in IMG/M
3300025110\|Ga0208158_1020007	All Organisms → Viruses → Predicted Viral	1761	Open in IMG/M
3300025110\|Ga0208158_1057960	Not Available	945	Open in IMG/M
3300025118\|Ga0208790_1004689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5373	Open in IMG/M
3300025118\|Ga0208790_1013363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2919	Open in IMG/M
3300025118\|Ga0208790_1078709	Not Available	988	Open in IMG/M
3300025122\|Ga0209434_1061479	Not Available	1136	Open in IMG/M
3300025122\|Ga0209434_1068151	All Organisms → Viruses → Predicted Viral	1063	Open in IMG/M
3300025122\|Ga0209434_1074246	All Organisms → Viruses → Predicted Viral	1007	Open in IMG/M
3300025122\|Ga0209434_1148526	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300025125\|Ga0209644_1052852	Not Available	931	Open in IMG/M
3300025128\|Ga0208919_1149195	Not Available	725	Open in IMG/M
3300025128\|Ga0208919_1231455	Not Available	543	Open in IMG/M
3300025131\|Ga0209128_1008139	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5511	Open in IMG/M
3300025131\|Ga0209128_1025085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2517	Open in IMG/M
3300025132\|Ga0209232_1111848	Not Available	910	Open in IMG/M
3300025133\|Ga0208299_1013258	All Organisms → Viruses → Predicted Viral	3948	Open in IMG/M
3300025133\|Ga0208299_1047820	All Organisms → Viruses → Predicted Viral	1650	Open in IMG/M
3300025133\|Ga0208299_1074752	All Organisms → Viruses → Predicted Viral	1206	Open in IMG/M
3300025141\|Ga0209756_1001331	All Organisms → cellular organisms → Bacteria	22871	Open in IMG/M
3300025632\|Ga0209194_1120289	Not Available	644	Open in IMG/M
3300025873\|Ga0209757_10261774	Not Available	550	Open in IMG/M
3300025892\|Ga0209630_10093401	All Organisms → Viruses → Predicted Viral	1643	Open in IMG/M
3300025892\|Ga0209630_10131287	All Organisms → Viruses → Predicted Viral	1299	Open in IMG/M
3300028022\|Ga0256382_1006803	All Organisms → Viruses → Predicted Viral	2012	Open in IMG/M
3300031775\|Ga0315326_10123586	All Organisms → Viruses → Predicted Viral	1692	Open in IMG/M
3300031775\|Ga0315326_10877714	Not Available	554	Open in IMG/M
3300032073\|Ga0315315_10444124	All Organisms → Viruses → Predicted Viral	1204	Open in IMG/M
3300032278\|Ga0310345_10010338	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	7890	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	54.61%
Coastal	Environmental → Aquatic → Marine → Coastal	10.64%
Strait	Environmental → Aquatic → Marine → Strait	9.93%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	9.22%
Pelagic	Environmental → Aquatic → Marine → Pelagic	4.26%
Unclassified	Environmental → Aquatic → Marine → Unclassified	3.55%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	2.84%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	2.84%
Inlet	Environmental → Aquatic → Marine → Inlet	2.13%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	53.19%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	10.64%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	9.93%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	6.38%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	4.26%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	3.55%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	2.84%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	2.84%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	2.13%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.13%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.71%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	0.71%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.71%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	51.77%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	10.64%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	9.93%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	6.38%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	3.55%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	3.55%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	2.84%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	2.84%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	2.13%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.13%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	0.71%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.71%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.71%
Background Seawater	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater	0.71%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.71%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300002242	Marine sediment microbial communities from Kolumbo Volcano mats, Greece - white/grey mat	Environmental	Open in IMG/M
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental	Open in IMG/M
3300002518	Marine viral communities from the Pacific Ocean - ETNP_6_100	Environmental	Open in IMG/M
3300002519	Marine viral communities from the Pacific Ocean - ETNP_2_300	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300005427	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV65	Environmental	Open in IMG/M
3300005430	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006736	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006751	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006923	Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG	Environmental	Open in IMG/M
3300006927	Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300007508	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 2.7-0.2um, replicate a	Environmental	Open in IMG/M
3300007510	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 267m, 250-2.7um, replicate a	Environmental	Open in IMG/M
3300007512	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 250-2.7um, replicate b	Environmental	Open in IMG/M
3300007513	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 250-2.7um, replicate b	Environmental	Open in IMG/M
3300007756	Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDBack_2015_DNA CLC_assembly	Environmental	Open in IMG/M
3300007770	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 250-2.7um, replicate a	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300008952	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 237m, 250-2.7um	Environmental	Open in IMG/M
3300009049	Estuarine microbial communities from the Columbia River estuary - metaG 1558A-02	Environmental	Open in IMG/M
3300009103	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 143m, 250-2.7um	Environmental	Open in IMG/M
3300009126	Combined Assembly of Gp0139357, Gp0139356	Environmental	Open in IMG/M
3300009129	Combined Assembly of Gp0139513, Gp0139514	Environmental	Open in IMG/M
3300009130	Combined Assembly of Gp0139511, Gp0139512	Environmental	Open in IMG/M
3300009370	Combined Assembly of Gp0127930, Gp0127931	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009435	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413	Environmental	Open in IMG/M
3300009508	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120412	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300010151	Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaG	Environmental	Open in IMG/M
3300010155	Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300013113	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 103m, 250-2.7um, replicate a	Environmental	Open in IMG/M
3300013114	Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, May cruise - 198m, 250-2.7um, replicate a	Environmental	Open in IMG/M
3300017703	Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaG	Environmental	Open in IMG/M
3300017704	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaG	Environmental	Open in IMG/M
3300017705	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaG	Environmental	Open in IMG/M
3300017715	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_06 viral metaG	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017775	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020189	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071401CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020348	Marine microbial communities from Tara Oceans - TARA_B100000676 (ERX556089-ERR599161)	Environmental	Open in IMG/M
3300020355	Marine microbial communities from Tara Oceans - TARA_B100000676 (ERX556077-ERR598988)	Environmental	Open in IMG/M
3300020404	Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)	Environmental	Open in IMG/M
3300020410	Marine microbial communities from Tara Oceans - TARA_B100000519 (ERX555959-ERR599148)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300023112 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_2_MG	Environmental	Open in IMG/M
3300023210 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MG	Environmental	Open in IMG/M
3300025072	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)	Environmental	Open in IMG/M
3300025082	Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)	Environmental	Open in IMG/M
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental	Open in IMG/M
3300025102	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025103	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)	Environmental	Open in IMG/M
3300025110	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG (SPAdes)	Environmental	Open in IMG/M
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental	Open in IMG/M
3300025122	Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)	Environmental	Open in IMG/M
3300025125	Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025132	Marine viral communities from the Pacific Ocean - ETNP_2_60 (SPAdes)	Environmental	Open in IMG/M
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental	Open in IMG/M
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental	Open in IMG/M
3300025632	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)	Environmental	Open in IMG/M
3300025873	Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)	Environmental	Open in IMG/M
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental	Open in IMG/M
3300028022	Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750m	Environmental	Open in IMG/M
3300031775	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 32315	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
KVRMV2_1014185353	3300002231	Marine Sediment	MRKFTQSILGKGVTFTKLCKVRDNRGRVDYARKDIDGIVVENDGYVATVRGWDGTLHTNVETAELVTWAEADQRLDMP
KVWGV2_103357128	3300002242	Marine Sediment	MRKFTQSIIGKGVTFTKLAKVRDTRGKVDFERIDIEGIVTENDGYVCTVRGWDGVMHTNVETAEVRAWQEADRNIEDELSCLV*
KVWGV2_103446282	3300002242	Marine Sediment	MRKFSQSIVGKGVTFTKLAKVRDSKGRVDYARQDIDGIVTESDGYLCTVRAWDGSIHSNVENAELQTWAEADRNIEDELSCLV*
KVWGV2_103471805	3300002242	Marine Sediment	MRKFTQSILGKGVTFTKLCKVRDNRGRVDYARKDIDGIVVENDGYVATVRGWDGTLHTNVETAELVTWAEADQRLDMPCLD*
JGI25133J35611_100043735	3300002514	Marine	MRKFTQSILGKGVTFTKLCKVRDARGRVDYARKDIDGIVTENDGYLCTVRGWDGTMHTNVETTELVTWAEADEPTQDMPCLD*
JGI25133J35611_100294064	3300002514	Marine	MRKFTQSILGTGVTFTKLSKFRDARGRVDYERQEVDGIVTESDGYLCTIRAWDGSVHSNVESSELIPWAEADAGWVLDMPCLD*
JGI25134J35505_100379642	3300002518	Marine	MRKFTQSILGKGVTFTTLVKFRDARNRIDFERQEIDGIIVENDGYVCTIRGWDGKIHRNVETCEVTPWPTPRVPHGLDMPCTD*
JGI25130J35507_10133314	3300002519	Marine	MRKFTQSILGKGVTFTQLVKFRDAKGRVDFDRVEVDGIIVENDGYVCTIRGWDGKIHRNVETCEVTPWPTPRVPHGLDMPCTD*
Ga0055584_1010358253	3300004097	Pelagic Marine	MRKFSQSIVGKGVTFTKLAKVRDSKGRVDYARQDIDGIVMESDGYLCTVRAWDGGIHSNVESSELKTWAEADRNIEDELSCLV*
Ga0055584_1018607182	3300004097	Pelagic Marine	MRKFSQSIVGKGVTFTKLARVRDTRGRVDYERQEIDGIIMENDGYLCTVRGWDGTVHTNVETSEIKTWAEADNNIEEELSCLV*
Ga0066851_101659832	3300005427	Marine	MRKFTQSILGKGVTFTKLCKVRDARGRVDYARKDIDGIVTENDGYVATVRGWDGTMHTNVETTELVTWAEADEPTQDMPCLD*
Ga0066849_100901352	3300005430	Marine	MRKFSQSIVGKGVTFTKLARVRDSRGRVDYERQEIDGIITENDGYLCTVRAWDGKIHSNIETSEIKTWEEADRSIEDELSCLV*
Ga0066849_101122833	3300005430	Marine	MRKFTQSILGKGVTFTKLCKVRDSKGRVDYARQDIDGIVVENDGYVATVRGWDGTMHTNVETAELQTWQEADSNIEDELSCLV*
Ga0098038_10502064	3300006735	Marine	MRKFSQSIVGKGVTFTKLAKVRDSKGRVDYARQDIDGIVTESDGYLCTVRAWDGSMHSNVENSELKTWAEADRNIEDELSCLV*
Ga0098038_11038451	3300006735	Marine	MRKFTQSILGKGVTFTKLCKVRDKRGRVDYARQDIDGIVVENDGYVATIRGWDGVLHTNVETAELKTWAEADRNIEDELSCLV*
Ga0098033_10427153	3300006736	Marine	MRKFTQSILGKGVTFTKLIKVRDTKGRVDFERQEIDGIITENDGYVCTVRGWDGTLHENVETCEVTAWPTPRIPHGLDMPCLE*
Ga0098033_11757701	3300006736	Marine	FTQSILGKGVTFTTLVKFRDARNRIDFERQEIDGIIVENDGYVCTIRGWDGKIHKNVETCEVTPWPTPRVPHGLDMPCTD*
Ga0098035_11114851	3300006738	Marine	MRKFTQSILGKGVTFTTLVKFRDARNRIDFERQEIDGIIVENDGYVCTVRGWDGKIHKNVETCEVTPWPTPRIPQGLDMPCVE*
Ga0098058_10445022	3300006750	Marine	MRKFSQSIVGKGVTFTKLVRVRDSRGRVDYDRQEIDGIIMENDGYLCTVRGWDGSIHTNVETSEIKTWAEADNNIDEELSCLV*
Ga0098058_10844032	3300006750	Marine	MRKFTQSILGTGVTFTKLSKFRDARGRVDYERQEVDGIVTESDGYLCTIRAWDGSVHSNVESSELIPWAESDAGWVLDMPCLD*
Ga0098058_11058242	3300006750	Marine	GKGVTFTTLVKFRDARNRIDFERQEIDGIIVENDGYVCTVRGWDGKIHKNVETCEVTPWPTPRIPQGLDMPCVE*
Ga0098040_10231974	3300006751	Marine	MRKFSQSIVGKGVTFTKLAKVRDSKGRVDYARQDIDGIVTESDGYLSTVRAWDGSIHSNVENAELTTWAEADQPTQDMPCFD*
Ga0098040_12116711	3300006751	Marine	MRKFTQSILGKGVTFTKLCKVRDSKGRVDYARKDIDGIVVENDGYVATVRDWDGTMHTNVETAELQTWQEADSNIEDELSCLV*
Ga0098039_11704782	3300006753	Marine	MRKFTQSIVGKGVTFNKLVKYRDAKGRVDFERVEVDGIVTENDGYVCTVRSWEGVVYENVETSELTGWGLPLKPHDMPCTD*
Ga0098039_13334431	3300006753	Marine	MRKFTQSILGKGVTFTQLVKFRDAKGRVDFDRVEVDGIIVENDGYVCTIRGWDGKIHKNVETCEVTPWPTPRVPHGLDMPCTD*
Ga0098044_10223617	3300006754	Marine	MRKFTQSIIGKGVTFTKLAKMRDIKGRVDYARKEIDGIVVENDGYVCTVRGWDGTVHTNVETAELQTWAEADNNIDEELPCLV*
Ga0098044_10451706	3300006754	Marine	MRKFSQSIVGKGVTFTKLAKMRDAKGRVDYARQEIDGIIMESDGYLSTVRAWDGTVHSNVENSELITWAEADRNIEDELSCLV*
Ga0098044_11719712	3300006754	Marine	MRKFTQSILGKGVTFTQLEKFRDKKGRVDFNRVEVDGIIIENDGYLCTIRGWDGKIHRNVETCEVTPWPTPRVPHGLDMPCLD*
Ga0098054_10300834	3300006789	Marine	MRKFSQSIVGKGVTFTKLAKMRDSRGRVDYARQDIDGIVTESDGYLSTVRAWDGSIHSNVENAELTTWAEADQPAQDMPCLD*
Ga0098055_10564073	3300006793	Marine	MRKFTQTIIGKGVTFTKLAKVRDTRGRVDFERIEIEGIVTENDGYVCTVRGWDGVMHTNVETTEIKTWKEADRSIEEELSCLV*
Ga0098055_12185782	3300006793	Marine	MRKFSQSIVGKGVTFTKLARVRDSKGRIDYERQEIDGIIMENDGYLCTVRGWDGSIHTNVETSEIKTWAEADNNIEDELSCLV*
Ga0098053_10120463	3300006923	Marine	MRKFTQSILGKGVTFTKLCKVRDARGRVDYARKDIDGIVTENDGYVATVRGWDGTMHTNVETTELVTRAEADEPTQDMPCLD*
Ga0098053_10183455	3300006923	Marine	MRKFSQSIVGKGVTFTKLAKMRDSRGRVDYARQDIDGIVTESDGYLSTVRAWDGSIHSNVENAELTTWAEADQPTQDMPCLD*
Ga0098034_11397782	3300006927	Marine	QFRDKKNRVDYERKEIDGVIIENDGYVCTIRGWDGTIYENVETCELTPWPTPRVPHGLDMPCTD*
Ga0098041_10088203	3300006928	Marine	MRKFSQSIVGKGVTFTKLAKVRDSRGRVDYARKEIDGIVTESDGYLSTVRAWDGSVHSNVENSELVAWADADRNIEDELSCLV*
Ga0098041_10173606	3300006928	Marine	MRKFSQSIVGKGVTFTKLARVRDSRGKIDYERQEIDGIITENDGYLCTVRAWDGKLHTNVETSEIKTWAEADSNIEDELSCLV*
Ga0098041_10183132	3300006928	Marine	MRKFTQSILGKGVTFTKLCKVRDSKGRVDYARKDIEGIVVENDGYVATVRGWDGTMHTNVETAELQTWKEADRNIEDELSCLV*
Ga0098041_11006633	3300006928	Marine	WCILFIGDNMRKFTQSILGKGVTFTKLCKVRDSKGRVDYARKDIEGIVVENDGYVATVRGWDGTMHTNVETAELQTWQEADRNIEDELSCLV*
Ga0105011_10957304	3300007508	Marine	MRKFTQSILGKGVTFTKLIKVRDTKGRVDFERQEIDGIITENDGYVCTVRGWDGTVHENVETCEVTAWPTPRVPHGLDMPCLE*
Ga0105013_14173261	3300007510	Marine	FDLLVHPRHGRRGLLFIGDTMRKFTQSILGKGVTFTQLEKFRDKKGRIDFNRVEVDGIIIENDGYLCTIRGWDGKIHKNVETCEVTPWPTPRIPQGLDMPCVD*
Ga0105016_10911055	3300007512	Marine	MRKFTQSILGKGVTFTKLCKVRDNRGRVDYARKDVDGIVVENDGYVATVRGWDGVLHTNVETAELTTWAEADEPTQDMPCLD*
Ga0105016_11524702	3300007512	Marine	MRKFTQSILGKGVTFTQLEKFRDKKGRIDFNRVEVDGIIIENDGYLCTIRGWDGKIHKNVETCEVTPWPTPRIPQGLDMPCVD*
Ga0105019_10833804	3300007513	Marine	MRKFTQSILGKGVTFTKLCKVRDKRGRVDYARKDVDGIVVENDGYVATVRGWDGVLHTNVETAELVTWAEADQPTQDMPCLD*
Ga0105664_11888111	3300007756	Background Seawater	MRKFTQSIVGKGVTFNKLVKFRDGKGRVDFERVEVDGIVTENDGYLCTVRSWGGVVYENVETSELTGWGLPLKPHDIPCGD*
Ga0105015_11550842	3300007770	Marine	SILGKGVTFTQLEKFRDKKGRIDFNRVEVDGIIIENDGYLCTIRGWDGKIHKNVETCEVTPWPTPRIPQGLDMPCVD*
Ga0110931_10589733	3300007963	Marine	MRKFTQSILGKGVTFTKLAKVRDSKGRVDYARKEIDGIVVENDGYVCTVRGWDGTVHTNVETAELQTWKETDDNINEELSCLV*
Ga0110931_11113212	3300007963	Marine	MRKFTQSILGKGVTFTKLCKVRDKRGRVDYARKDVDGIVVENDGYVATVRGWDGVLHTNVETAELVTWAEADEPTQDMPCFD*
Ga0098052_10314688	3300008050	Marine	MRKFSQSIIGKGVTFTKLAKVRDSKGRVDYARQDIDGIVTESDGYLSTVRAWDGSIHSNVENAELTTWAEADQPTQDMPCLD*
Ga0114905_12036541	3300008219	Deep Ocean	ASSSALTVYKETIMRKFTQTIIGKGVTFTKLAKVRDTRGRVDFERIEIEGIVTENDGYVCTVRGWDGVMHTNVETTEIKTWQEADRNIEDELSCLV*
Ga0115651_12232462	3300008952	Marine	MRKFTQSILGKGVTFTKLCKVRDNRGRVDYARKDVDGIVVENDGYVATVRGWDGVLHTNVETAELVTWAEADQPTQDMPCLD*
Ga0102911_12016451	3300009049	Estuarine	MRKFSQSIVGKGVTFTKLAKVRDSKGRVDYARQDIDGIVMESDGYLCTVRAWDGNIHSNVENSELQTWAEADRNIEDELSCLV*
Ga0117901_12509051	3300009103	Marine	QSILGKGVTFTKLCKVRDKRGRVDYARKDVDGIVVENDGYVATVRGWDGVLHTNVETSELITWAEADKPLDMPCLD*
Ga0118723_11386051	3300009126	Marine	MRKFTQSILGKGVTFTKLCKVRDNRGRVDYARKDVDGIVVENDGYVATVRGWDGVLHTNVETAELTTWAEADQPTQDMPCLD*
Ga0118728_10654193	3300009129	Marine	MRKFTQSILGKGVTFTKLCKVRDNRGRVDYARKDVDGIVVENDGYVATVRGWDGVLHTNVETAELTTWAETDTQDMPCLD*
Ga0118728_11703101	3300009129	Marine	RKFTQSILGKGVTFTKLCKVRDKRGRVDYARKDVDGIVVENDGYVATVRGWDGVLHTNVETSELITWAEADKPLDMPCLD*
Ga0118729_10683202	3300009130	Marine	MRKFTQSILGKGVTFTKLCKVRDNRGRVDYARKDVDGIVVENDGYVATVRGWDGVLHTNVETAELVTWAEADEPTQDMPCLD*
Ga0118716_12894532	3300009370	Marine	MRKFTQSILGKGVTFTKLCKVRDNRGRVDYARKDVDGIVVENDGYVATVRGWDGVLHTNVETAELTTWAE
Ga0115545_10268811	3300009433	Pelagic Marine	TNHFIGDSMRKFTQTIIGKGVTFTKLAKVRDTRGRVDFERIEIEGIVTENDGYVCTVRGWDGVMHTNVETTEIKTWKEADRSIEDELSCLV*
Ga0115546_10710962	3300009435	Pelagic Marine	MRKFSQSIVGKGVTFTKLAKVRDSKGRVDYARQDIDGIVMESDGYLCTVRAWDGNIHSNVESSELQTWAEADRNIEDELSCLV*
Ga0115546_11442402	3300009435	Pelagic Marine	MRKFTQTIIGKGVTFTKLAKVRDTRGRVDFERIEIEGIVTENDGYVCTVRGWDGVMHTNVETTEIKTWKEADRSIEDELSCLV*
Ga0115567_105595282	3300009508	Pelagic Marine	GDSMRKFSQSIVGKGVTFTKLAKVRDSKGRVDYARQDIDGIVVESDGYLSTVRAWDGNIHSNVENSELQTWAEADRNIEDELSCLV*
Ga0115011_101365805	3300009593	Marine	MRKFSQSIVGKGVTFTKLAKMRDSKGRVDYARQDIDGIVTESDGYLCTVRAWDGSIHSNVENSELQTWAEADRNIEDELSCLV*
Ga0098061_12893542	3300010151	Marine	VRKFTQSILGKGVTFTQLEKFRDKKGRVDFNRVEVDGIIIENDGYLCTIRGWDGKIHRNVETCEVTPWPTPRVPHGLDMPCLD*
Ga0098047_100697101	3300010155	Marine	GKGVTFTQLEKFRDKKGRVDFNRVEVDGIIIENDGYLCTIRGWDGKIHRNVETCEVTPWPTPRVPHGLDMPCLD*
Ga0160423_105675932	3300012920	Surface Seawater	MRKFSQSIVGKGVTFTKLAKVRDSKGRVDYARQDIDGIVVESDGYLCTVRAWDGSIHSNVENSELQTWAEADRNIEDELSCLV*
Ga0171647_10494431	3300013113	Marine	MRKFTQSILGKGVTFTKLCKVRDKRGRVDYARKDVDGIVVENDGYVATVRGWDGVLHTNVETAELVTWAEADEPTQDMPCLD*
Ga0171650_10369812	3300013114	Marine	MRKFTQSILGKGVTFTKLCKVRDKRGRVDYARKDVDGIVVENDGYVATVRGWDGVLHTNVETSELITWAEADKPLDMPCLD*
Ga0181367_10436371	3300017703	Marine	RLILFIKDNIMRKFTQSILGKGVTFTKLCKVRDARGRVDYARKDIDGIVTENDGYVATVRGWDGTMHTNVETTELVTWAEADEPTQDMPCLD
Ga0181367_10785772	3300017703	Marine	MRKFTQSILGKGVTFTQLEKFRDKKGRVDFNRVEVDGIIIENDGYLCTIRGWDGKIHRNVETCEVTPWPTPRVPHGLDMPCLD
Ga0181367_10808342	3300017703	Marine	MRKFTQSIVGTGVTFNELVQFRDKKNRVDYERKEIDGVIIENDGYVCTIRGWDGTIYENVETCELTPWPTPRVPNGLDMPCTD
Ga0181367_10857671	3300017703	Marine	MRKFTQSILGKGVTFTKLSKFRDARGRVDYKRQDVDGIVVENDGYVATVRGWDGTMHTNVETSELITWAEADEPTQDMPCLD
Ga0181371_10043028	3300017704	Marine	MRKFTQSIIGKGVTFTTLVKFRDARNRIDFERQEIDGIIVENDGYVCTVRGWDGKIHKNVETCEVTPWPTPRIPQGLDMPCVE
Ga0181372_10051031	3300017705	Marine	MRKFTQSILGKGVTFTKLCKVRDARGRVDYARKDIDGIVTENDGYVATVRDWDGTMHTNVETAELQTWQEADSNIEDELSC
Ga0181370_10084156	3300017715	Marine	MRKFTQSIVGKGVTFNKLVKYRDAKGRVDFERVEVDGIVTENDGYVCTVRSWEGVVYENVETSELTGWGLPL
Ga0181370_10430842	3300017715	Marine	KFTQSILGKGVTFTTLVKFRDARNRIDFERQEIDGIIVENDGYVCTIRGWDGKIHKNVETCEVTPWPTPRVPHGLDMPCTD
Ga0181383_100034115	3300017720	Seawater	MRKFSQSIVGKGVTFTKLAKVRDSKGRVDYARQDIDGIVVESDGYLCTVRAWDGNIHSNVENSELQTWAEADRNIEDELSCLV
Ga0181383_11048411	3300017720	Seawater	QSIVGKGVTFTKLAKVRDSKGRVDYARQDIDGIVMESDGYLCTVRAWDGGIHSNVENSELKTWAEADRNIEDELSCLV
Ga0181405_10740902	3300017750	Seawater	RPLLLVCSRNCCWRIHFIGDNMRKFTQSIIGKGVTFTKLCKVRDTRGRVDYARKDIEGIVVENDGYVATVRGWDGTMHTNVETAELQTWQEADRNIEDELSCLV
Ga0181410_10783871	3300017763	Seawater	FTQTIIGKGVTFTKLAKVRDTRGRVDLERIEIEGIVTENDGYVCTVRGWDGVMHTNVETTEIKTWQEADRSIEEELSCLV
Ga0187220_10264471	3300017768	Seawater	IVGKGVTFTKLAKVRDSRGRVDYARQDIDGIVTESDGYLSTVRAWDGSIHSNVENAELTTWAEADEPTQDMPCFD
Ga0187220_11111152	3300017768	Seawater	MRKFSQSIVGKGVTFTKLCKVRDSRGRVDYARQDIDGIVMESDGYLSTVRAWDGSIHSNVENAELTTWKEADDNINEELSCLV
Ga0187220_12006471	3300017768	Seawater	NHFIGDSMRKFTQTIIGKGVTFTKLAKVRDTRGRVDYERIEIEGIVTENDGYVCTVRGWDGVMHTNVETAEIKTWKEADRNIEDELSCLV
Ga0187220_12602211	3300017768	Seawater	MRKFSQSIVGKGVTFTKLARVRDSKGRVDYERQEIDGIIMENDGYLCTVRAWDGSIHTNVETSEIKTWAEADRNIEDELSCLV
Ga0181432_10127184	3300017775	Seawater	MRKFTQSILGKGVTFTQLVKFRDAKGRVDFNRVEVDGLIIENDGYLCTIRGWDGKIHRNVETCEVSPWPTPRVPHGLDMPCTD
Ga0181432_10199322	3300017775	Seawater	MRKFTQAIVGKGVTFNKLVKFRDGRGRVDFERVEVDGIVTENDGYLCTVRSWEGVVYENVETSELTGWGLPLKPHDMPCGD
Ga0181432_10281493	3300017775	Seawater	MRKFTQSIVGTGVTFNELVQFRDKKNRVDYERKEIDGVIIENDGYVCTIRGWDGTIYENVETCELTPWPTPRVPHGLDMPCTD
Ga0181432_10879531	3300017775	Seawater	MRKFTQSIVGKGVTFTTLVKFRDARNRIDFERQEIDGIIVENDGYVCTVRGWDGKIHKNVETCEVTPWPTPRIPQGLDMPCVE
Ga0181394_10706703	3300017776	Seawater	FTKLAKVRDTRGRVDFERIEIEGIVTENDGYVCTVRGWDGVMHTNVETTEIKTWQEADRSIEEELSCLV
Ga0181394_12088171	3300017776	Seawater	FTKLAKVRDTRGRVDFERIEIEGIVTENDGYVCTVRGWDGVMHTNVETAEIKTWKEADRNIEDELSCLV
Ga0181583_103130143	3300017952	Salt Marsh	MRKFTQTIIGKGVTFTKLAKIRDSKGRVDFERIEIEGVVTENDGYVCTVRGWDGVLHTNVETAEIKTWKEADDNISEQLSCLV
Ga0181580_109270842	3300017956	Salt Marsh	CWSLLLIGDTMRKFTQTIIGKGVTFTKLAKVRDKRGRVDFERIEIEGIVTENDGYVCTVRGWDGVLHTNVETAEIKTWKEADDNISEQLSCLV
Ga0181582_107258531	3300017958	Salt Marsh	LLLIGDTMRKFTQTIIGKGVTFTKLAKVRDKRGRVDFERIEIEGIVTENDGYVCTVRGWDGVLHTNVETAEIKTWKEADDNISEQLSCLV
Ga0181581_108528701	3300017962	Salt Marsh	MRKFTQTIIGKGVTFTKLAKVRDTKGRVDFERIEIEGIVTENDGYVCTVRGWDGVLHTNVETAEIKTWKEADDNISEQLSC
Ga0181589_108444031	3300017964	Salt Marsh	MRKFTQTIIGKGVTFTKLAKVRDKRGRVDFERIEIEGIVTENDGYVCTVRGWDGVLHTNVETAEIKTWKEADDNIS
Ga0181590_110841331	3300017967	Salt Marsh	MRKFTQTIIGKGVTFTKLAKIRDSKGRVDFERIEIEGIVTENDGYVCTVRGWDGVLHTNVETAEIKTWKEADDNISEQLSCLV
Ga0181592_104603472	3300018421	Salt Marsh	MRKFTQTIIGKGVTFTKLAKVRDTKGRVDFERIEIEGIVTENDGYVCTVRGWDGVLHTNVETAEIKTWKEADDNISEQLSCLV
Ga0181593_101506761	3300018423	Salt Marsh	MRKFTQTIIGKGVTFTKLAKVRDKRGRVDFERIEIEGVVTENDGYVCTVRGWDGVLHTNVETAEIKTWKEADDNISEQLSCLV
Ga0181578_102902922	3300020189	Salt Marsh	MRKFTQTIIGKGVTFTKLAKVRDKRGRVDFERIEIEGIVTENDGYVCTVRGWDGVLHTNVETAEIKT
Ga0211600_10715332	3300020348	Marine	MRKFTQSIIGKGVTFTKLSRVRDGRGRIDYQRKEVDGIVTENDGYVCTVRGWDGTLHTNVETAELKTWAEADRNIEDELSCLV
Ga0211598_10273173	3300020355	Marine	MRKFSQSIVGKGVTFTKLCRVRDKRGKIDYERQEIDGIITENDGYLCTVRGWDGSIHTNVETSEIKTWAEADRNIEDELSCLV
Ga0211659_100454696	3300020404	Marine	MRKFSQSIVGKGVTFTKLAKVRDSKGRVDYARQDIDGIVTESDGYLCTVRAWDGSMHSNVENSELKTWAEADRNIEDELSCLV
Ga0211699_1000186313	3300020410	Marine	MRKFSQSIVGKGVTFTKLARVRDSKGRIDYERQEIDGIITENDGYLCTVRAWDGKLHTNVETSEIKTWAEADNNIEEELSCLV
Ga0211576_100288347	3300020438	Marine	MRKFTQTIIGKGVTFTKLAKVRDTRGRVDFERIEIEGIVTENDGYVCTVRGWDGVMHTNVETTEIKTWQEADRSIEEELSCLV
(restricted) Ga0233411_100392812	3300023112	Seawater	MRKFSQSIVGKGVTFTKLCKVRDSRGRVDYARQDIDGIVTESDGYLSTVRAWDGSIHSNVENAELIPWAEADDNINEELSCLV
(restricted) Ga0233411_100849722	3300023112	Seawater	MRKFSQSIVGKGVTFTKLVRVRDSRGRVDYERQEIDGIIMENDGYLCTVRAWDGSIHSNVETSEIKTWAEADNNIEEELSCLV
(restricted) Ga0233412_101428581	3300023210	Seawater	MRKFSKSIVGKGVTFTKLCKVRDSRGRVDYARQDIDGIVMESDGYLSTVRAWDGSIHSNVENAELTTWKEADDNINEELSCLV
Ga0208920_10031468	3300025072	Marine	MRKFTQSILGKGVTFTKLCKVRDARGRVDYARKDIDGIVTENDGYLCTVRGWDGTMHTNVETTELVTWAEADEPTQDMPCLD
Ga0208920_10396432	3300025072	Marine	MRKFSQSIVGKGVTFTKLVRVRDSRGRVDYDRQEIDGIIMENDGYLCTVRGWDGSIHTNVETSEIKTWAEADNNIDEELSCLV
Ga0208156_10794862	3300025082	Marine	SLGEHMRKFTQSILGKGVTFTKLIKVRDTKGRVDFERQEIDGIIVENDGYVCTIRGWDGKIHKNVETCEVTPWPTPRVPHGLDMPCTD
Ga0208011_10481992	3300025096	Marine	MRKFSQSIVGKGVTFTKLAKVRDSKGRVDYARQDIDGIVTESDGYLSTVRAWDGSIHSNVENAELTTWAEADQPTQDMPCFD
Ga0208666_10781642	3300025102	Marine	MRKFSQSIVGKGVTFTKLAKVRDSKGRVDYARQDIDGIVVENDGYVATIRGWDGVLHTNVETAELKTWAEADRNIEDELSCLV
Ga0208013_10088067	3300025103	Marine	MRKFSQSIVGKGVTFTKLAKMRDSRGRVDYARQDIDGIVTESDGYLSTVRAWDGSIHSNVENAELTTWAEADQPAQDMPCLD
Ga0208158_10091472	3300025110	Marine	MRKFSQSIVGKGVTFTKLAKVRDSRGRVDYARKEIDGIVTESDGYLSTVRAWDGSVHSNVENSELVAWADADRNIEDELSCLV
Ga0208158_10200075	3300025110	Marine	MRKFSQSIVGKGVTFTKLARVRDSRGKIDYERQEIDGIITENDGYLCTVRAWDGKLHTNVETSEIKTWAEADSNIEDELSCLV
Ga0208158_10579602	3300025110	Marine	MRKFTQSILGKGVTFTKLCKVRDSKGRVDYARKDIEGIVVENDGYVATVRGWDGTMHTNVETAELQTWKEADRNIEDELSCLV
Ga0208790_100468914	3300025118	Marine	MRKFSQSIIGKGVTFTKLAKVRDSKGRVDYARQDIDGIVTESDGYLSTVRAWDGSIHSNVENAELTTWAEADQPTQDMPCFD
Ga0208790_10133636	3300025118	Marine	MRKFTQSILGKGVTFTKLCKVRDSKGRVDYARQDIDGIVVENDGYVATVRGWDGTMHTNVETAELQTWQEADSNIEDELSCLV
Ga0208790_10787092	3300025118	Marine	MRKFTQSIIGKGVTFTKLAKMRDIKGRVDYARKEIDGIVVENDGYVCTVRGWDGTVHTNVETAELQTWAEADNNIDEELPCLV
Ga0209434_10614793	3300025122	Marine	MRKFTQSILGKGVTFTKLSKFRDARGRVDYERQEVDGIVTESDGYLCTIRAWDGSVHSNVESSELIPWAESDAGWVLDMPCLD
Ga0209434_10681512	3300025122	Marine	MRKFTQSILGKGVTFTKLIKVRDTKGRVDFERQEIDGIITENDGYVCTVRGWDGTLHENVETCEVTAWPTPRIPHGLDMPCLE
Ga0209434_10742462	3300025122	Marine	MRKFTQSILGKGVTFTQLVKFRDAKGRVDFDRVEVDGIIVENDGYVCTIRGWDGKIHRNVETCEVTPWPTPRVPHGLDMPCTD
Ga0209434_11485261	3300025122	Marine	VRKFTQSILGKGVTFTQLEKFRDKKGRVDFNRVEVDGIIIENDGYLCTIRGWDGKIHRNVETCEVTPWPTPRVPHGL
Ga0209644_10528522	3300025125	Marine	MRKFTQSILGKGVTFTKLIKVRDTKGRVDFERQEIDGIITENDGYVCTVRGWDGTLHENVETCEVTPWPTPRIPQGLDMPCVE
Ga0208919_11491953	3300025128	Marine	MRKFTQSILGKGVTFTKLAKVRDSKGRVDYARKEIDGIVVENDGYVCTVRGWDGTVHTNVETAELQTWKETDDNINEELSCLV
Ga0208919_12314551	3300025128	Marine	MRKFTQSILGKGVTFTKLCKVRDKRGRVDYARKDVDGIVVENDGYVATVRGWDGVLHTNVETAELVTWAEADEPTQDMPCLD
Ga0209128_100813918	3300025131	Marine	MRKFTQSILGTGVTFTKLSKFRDARGRVDYERQEVDGIVTESDGYLCTIRAWDGSVHSNVESSELIPWAEADAGWVLDMPCLD
Ga0209128_10250855	3300025131	Marine	MRKFTQSILGKGVTFTTLVKFRDARNRIDFERQEIDGIIVENDGYVCTIRGWDGKIHRNVETCEVTPWPTPRVPHGLDMPCTD
Ga0209232_11118482	3300025132	Marine	MRKFSQSIVGKGVTFTKLAKVRDSKGRVDYARQDIDGIVVESDGYLCTVRAWDGGIHSNVENSELQTWAEADRNIEDELSCLV
Ga0208299_101325810	3300025133	Marine	MRKFTQSILGKGVTFTKLCKVRDARGRVDYARKDIDGIVTENDGYVATVRGWDGTMHTNVETTELVTWAEADEPTQDMPCLD
Ga0208299_10478202	3300025133	Marine	MLVHPRHHHRCILFIGDNNMRKFSQSIVGKGVTFTKLAKMRDSRGRVDYARQDIDGIVTESDGYLSTVRAWDGSIHSNVENAELTTWAEADQPAQDMPCLD
Ga0208299_10747522	3300025133	Marine	MRKFSQSIIGKGVTFTKLAKVRDSKGRVDYARQDIDGIVTESDGYLSTVRAWDGSIHSNVENAELTTWAEADQPTQDMPCLD
Ga0209756_100133163	3300025141	Marine	MRKFTQSILGTGVTFTKLSKFRDARGRVDYERQEVDGIVTESDGYLCTIRAWDGSVHSNVESSELIPWAESDAGWVLDM
Ga0209194_11202892	3300025632	Pelagic Marine	MRKFSQSIVGKGVTFTKLAKVRDSKGRVDYARQDIDGIVMESDGYLCTVRAWDGNIHSNVENSELQTWAEADRNIEDELSCLV
Ga0209757_102617741	3300025873	Marine	PYLSLGEHMRKFTQSILGKGVTFTKLVKFRDGRNRVDFDRVEVDGIIIENDGYVCTVRGWDGKVYKNVETCEITPWPTPRIPHGLDMPCLD
Ga0209630_100934014	3300025892	Pelagic Marine	MRKFTQTIIGKGVTFTKLAKVRDTRGRVDFERIEIEGIVTENDGYVCTVRGWDGVMHTNVETTEIKTWKEADRSIEDELSCLV
Ga0209630_101312873	3300025892	Pelagic Marine	MRKFSQSIVGKGVTFTKLAKVRDSKGRVDYARQDIDGIVVESDGYLCTVRAWDGNIHSNVESSELQTWAEADRNIEDELSCLV
Ga0256382_10068032	3300028022	Seawater	MRKFTQSIIGKGVTFTKLCKVRDTRGRVDYARKDIEGIVVENDGYVATVRGWDGTMHTNVETAELQTWQEADRNIEDELSCLV
Ga0315326_101235864	3300031775	Seawater	MRKFSQSIIGQGVTFTKLAKMRDSRGRVDYARQDIDGIVMESDGYLCTVRAWDGGIHSNVENSELKTWAEADRNIEDELSCLV
Ga0315326_108777141	3300031775	Seawater	MRKFSQSIVGKGVTFTKLAKVRDSRGRVDYARQDIDGIVTESDGYLSTVRAWDGSIHSNVENAELTTWAEADEPTQDMPCFD
Ga0315315_104441243	3300032073	Seawater	MRKFSQSIVGKGVTFTKLVRVRDSRGRVDYERQEIDGIIMENDGYLCTVRGWDGSIHSNVETSEIKTWAEADNNIEEELSCLV
Ga0310345_1001033815	3300032278	Seawater	MRKFTQSIVGKGVTFTQLEKFRDKKGRIDFARVEVDGIIIENDGYLCTIRGWDGKMHRNVETCEVTPWPTPRIPHGLDMPCVD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters