Metagenome / Metatranscriptome Family F053282

Basic Information
Family ID	F053282
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	55 residues
Representative Sequence	MTLQEKVDRLEELRRQLEGCESLEDAVDLLAEFDAAAKDLIDAIDQAKRESDAQP
Number of Associated Samples	109
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.76 %
% of genes near scaffold ends (potentially truncated)	28.37 %
% of genes from short scaffolds (< 2000 bps)	91.49 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Most Common Taxonomy
Group	Bacteria (64.539 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.638 % of family members)
Environment Ontology (ENVO)	Unclassified (38.298 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.262 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.63% β-sheet: 0.00% Coil/Unstructured: 43.37%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.2.8.1: Eukaryotic DNA topoisomerase I, dispensable insert domain	d1k4ta1	1k4t	0.9116
a.7.14.0: automated matches	d5fvka_	5fvk	0.89552
a.87.1.1: DBL homology domain (DH-domain)	d1txda1	1txd	0.8901
c.49.2.0: automated matches	d5ik2g_	5ik2	0.88501
a.25.1.2: Ribonucleotide reductase-like	d3n20b_	3n20	0.87174

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF01029	NusB	40.43
PF00348	polyprenyl_synt	34.75
PF02785	Biotin_carb_C	12.77
PF02786	CPSase_L_D2	4.26
PF01479	S4	2.13
PF01728	FtsJ	2.13
PF09957	VapB_antitoxin	1.42
PF00364	Biotin_lipoyl	0.71
PF02310	B12-binding	0.71
PF13476	AAA_23	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG0142	Geranylgeranyl pyrophosphate synthase	Coenzyme transport and metabolism [H]	34.75
COG0293	23S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJ	Translation, ribosomal structure and biogenesis [J]	2.13
COG1189	Predicted rRNA methylase YqxC, contains S4 and FtsJ domains	Translation, ribosomal structure and biogenesis [J]	2.13

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.25 %
Unclassified	root	N/A	34.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.25 %
Unclassified	root	N/A	34.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.54 %
Unclassified	root	N/A	34.75 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	15.60 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11.35 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	4.26 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3.55 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	2.84 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.42 %
Halobacteria	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.55 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.42 %
Halobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales	0.71 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.55 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.71 %
Halobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales	0.71 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.55 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.71 %
Halobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales	0.71 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.75 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.55 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.71 %
Halobacteriales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales	0.71 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig536266	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
2228664021\|ICCgaii200_c0847693	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300000956\|JGI10216J12902_100054564	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300000956\|JGI10216J12902_101942850	All Organisms → cellular organisms → Bacteria	1885	Open in IMG/M
3300000956\|JGI10216J12902_102314550	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300000956\|JGI10216J12902_104726701	All Organisms → cellular organisms → Bacteria	725	Open in IMG/M
3300000956\|JGI10216J12902_105264999	All Organisms → cellular organisms → Bacteria	2427	Open in IMG/M
3300000956\|JGI10216J12902_106455807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	659	Open in IMG/M
3300000956\|JGI10216J12902_112131769	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300003987\|Ga0055471_10310184	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300004019\|Ga0055439_10093564	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300004114\|Ga0062593_100001967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	7246	Open in IMG/M
3300004114\|Ga0062593_101517456	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300004114\|Ga0062593_101580030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	711	Open in IMG/M
3300004114\|Ga0062593_102550585	Not Available	580	Open in IMG/M
3300004463\|Ga0063356_101260746	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300004463\|Ga0063356_102183961	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300004479\|Ga0062595_100036522	All Organisms → cellular organisms → Bacteria	2093	Open in IMG/M
3300004479\|Ga0062595_100425171	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300004479\|Ga0062595_102236787	Not Available	537	Open in IMG/M
3300004643\|Ga0062591_101657264	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300005093\|Ga0062594_100869259	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300005093\|Ga0062594_101405098	Not Available	709	Open in IMG/M
3300005104\|Ga0066818_1017406	Not Available	577	Open in IMG/M
3300005164\|Ga0066815_10104773	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005330\|Ga0070690_101241024	Not Available	596	Open in IMG/M
3300005332\|Ga0066388_101935893	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300005332\|Ga0066388_102575363	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300005332\|Ga0066388_107038460	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300005339\|Ga0070660_101615641	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300005341\|Ga0070691_10954939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300005343\|Ga0070687_101050382	Not Available	593	Open in IMG/M
3300005345\|Ga0070692_10624122	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300005353\|Ga0070669_101500044	Not Available	586	Open in IMG/M
3300005365\|Ga0070688_101492151	Not Available	550	Open in IMG/M
3300005435\|Ga0070714_101837807	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005438\|Ga0070701_10740525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	665	Open in IMG/M
3300005445\|Ga0070708_101178541	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300005457\|Ga0070662_100924844	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Halobacteriales	745	Open in IMG/M
3300005526\|Ga0073909_10150748	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300005529\|Ga0070741_10011014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16848	Open in IMG/M
3300005529\|Ga0070741_10060345	All Organisms → cellular organisms → Bacteria	4424	Open in IMG/M
3300005535\|Ga0070684_100502029	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300005535\|Ga0070684_101564644	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300005544\|Ga0070686_101123327	Not Available	650	Open in IMG/M
3300005548\|Ga0070665_100397544	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300005548\|Ga0070665_102168150	Not Available	560	Open in IMG/M
3300005713\|Ga0066905_101087596	Not Available	709	Open in IMG/M
3300005713\|Ga0066905_101493958	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005764\|Ga0066903_101199739	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300005764\|Ga0066903_102095843	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300005887\|Ga0075292_1048010	Not Available	614	Open in IMG/M
3300005888\|Ga0075289_1000933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3891	Open in IMG/M
3300005937\|Ga0081455_10068027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	2966	Open in IMG/M
3300006046\|Ga0066652_100133543	All Organisms → cellular organisms → Bacteria	2057	Open in IMG/M
3300006575\|Ga0074053_11279248	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300006580\|Ga0074049_12814246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	781	Open in IMG/M
3300006755\|Ga0079222_10200834	All Organisms → cellular organisms → Bacteria	1199	Open in IMG/M
3300006844\|Ga0075428_102374759	Not Available	545	Open in IMG/M
3300006871\|Ga0075434_102132356	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300006881\|Ga0068865_100670892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	883	Open in IMG/M
3300006881\|Ga0068865_100944662	Not Available	752	Open in IMG/M
3300006904\|Ga0075424_101115082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	841	Open in IMG/M
3300007076\|Ga0075435_100285657	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300009098\|Ga0105245_10704888	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300009148\|Ga0105243_12224168	Not Available	585	Open in IMG/M
3300010359\|Ga0126376_12147023	Not Available	603	Open in IMG/M
3300010360\|Ga0126372_10673949	Not Available	1005	Open in IMG/M
3300010362\|Ga0126377_10075317	All Organisms → cellular organisms → Bacteria	3015	Open in IMG/M
3300010375\|Ga0105239_10684461	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300010375\|Ga0105239_11232921	All Organisms → cellular organisms → Bacteria	862	Open in IMG/M
3300010375\|Ga0105239_11350003	Not Available	823	Open in IMG/M
3300011119\|Ga0105246_10433259	Not Available	1100	Open in IMG/M
3300011119\|Ga0105246_12597198	Not Available	500	Open in IMG/M
3300012469\|Ga0150984_120753498	Not Available	563	Open in IMG/M
3300012496\|Ga0157353_1028680	Not Available	581	Open in IMG/M
3300012910\|Ga0157308_10054369	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300012957\|Ga0164303_10389922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	856	Open in IMG/M
3300012961\|Ga0164302_11082953	Not Available	631	Open in IMG/M
3300012984\|Ga0164309_10268234	All Organisms → cellular organisms → Bacteria	1213	Open in IMG/M
3300012985\|Ga0164308_10488394	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300012986\|Ga0164304_10724593	Not Available	758	Open in IMG/M
3300012989\|Ga0164305_11199368	Not Available	658	Open in IMG/M
3300013102\|Ga0157371_11507620	Not Available	524	Open in IMG/M
3300013105\|Ga0157369_11013524	Not Available	850	Open in IMG/M
3300013306\|Ga0163162_10423849	Not Available	1463	Open in IMG/M
3300013306\|Ga0163162_10642934	Not Available	1185	Open in IMG/M
3300013306\|Ga0163162_10812294	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300014745\|Ga0157377_11206468	Not Available	586	Open in IMG/M
3300015373\|Ga0132257_100812996	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300017966\|Ga0187776_11338352	Not Available	543	Open in IMG/M
3300018060\|Ga0187765_10375223	Not Available	872	Open in IMG/M
3300019361\|Ga0173482_10090120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1092	Open in IMG/M
3300022756\|Ga0222622_10032707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2791	Open in IMG/M
3300024232\|Ga0247664_1010376	All Organisms → cellular organisms → Bacteria	2147	Open in IMG/M
3300024254\|Ga0247661_1040683	Not Available	844	Open in IMG/M
3300024286\|Ga0247687_1017594	Not Available	999	Open in IMG/M
3300025558\|Ga0210139_1045332	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300025899\|Ga0207642_10161602	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300025901\|Ga0207688_10106139	All Organisms → cellular organisms → Bacteria	1626	Open in IMG/M
3300025910\|Ga0207684_10746387	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300025918\|Ga0207662_10515337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	825	Open in IMG/M
3300025920\|Ga0207649_10308533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1159	Open in IMG/M
3300025920\|Ga0207649_10568238	Not Available	869	Open in IMG/M
3300025927\|Ga0207687_10066130	All Organisms → cellular organisms → Bacteria	2569	Open in IMG/M
3300025929\|Ga0207664_11679241	Not Available	557	Open in IMG/M
3300025934\|Ga0207686_10311851	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300025934\|Ga0207686_11590976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300025936\|Ga0207670_10638728	Not Available	877	Open in IMG/M
3300025938\|Ga0207704_11681192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300025944\|Ga0207661_11749554	Not Available	567	Open in IMG/M
3300026023\|Ga0207677_10148611	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300026025\|Ga0208778_1007354	All Organisms → cellular organisms → Bacteria	1018	Open in IMG/M
3300026075\|Ga0207708_10527521	Not Available	993	Open in IMG/M
3300026078\|Ga0207702_10422862	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300026142\|Ga0207698_12202470	Not Available	564	Open in IMG/M
3300027401\|Ga0208637_1027417	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300027821\|Ga0209811_10037549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1627	Open in IMG/M
3300027821\|Ga0209811_10277466	Not Available	643	Open in IMG/M
3300027907\|Ga0207428_10476549	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300028379\|Ga0268266_10969341	Not Available	823	Open in IMG/M
3300028380\|Ga0268265_12026597	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300028587\|Ga0247828_10135725	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300028705\|Ga0307276_10212107	Not Available	512	Open in IMG/M
3300028713\|Ga0307303_10010928	All Organisms → cellular organisms → Bacteria	1619	Open in IMG/M
3300028809\|Ga0247824_10327236	Not Available	869	Open in IMG/M
3300028885\|Ga0307304_10388692	Not Available	628	Open in IMG/M
3300030336\|Ga0247826_10109636	All Organisms → cellular organisms → Bacteria	1737	Open in IMG/M
3300031170\|Ga0307498_10391922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300031226\|Ga0307497_10093669	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300031226\|Ga0307497_10113393	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300031240\|Ga0265320_10262206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	766	Open in IMG/M
3300031366\|Ga0307506_10102941	Not Available	939	Open in IMG/M
3300032013\|Ga0310906_11267606	Not Available	538	Open in IMG/M
3300032163\|Ga0315281_11294753	Not Available	723	Open in IMG/M
3300032174\|Ga0307470_10768227	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300033004\|Ga0335084_10314429	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300033004\|Ga0335084_10879291	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300033004\|Ga0335084_12297593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	521	Open in IMG/M
3300033550\|Ga0247829_11391475	Not Available	580	Open in IMG/M
3300033551\|Ga0247830_10316151	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.79%
Host-Associated	Host-Associated	31.21%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.25%
Plants	Host-Associated → Plants	31.21%
Aquatic	Environmental → Aquatic	3.55%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.35%
Marine	Environmental → Aquatic → Marine	2.13%
Freshwater	Environmental → Aquatic → Freshwater	0.71%
Sediment	Environmental → Aquatic → Sediment	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.55%
Loam	Environmental → Terrestrial → Soil → Loam	17.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.64%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.09%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.67%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.13%
Lake	Environmental → Aquatic → Freshwater → Lake	0.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.64%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.09%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.67%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.84%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.13%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.09%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.26%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.26%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.55%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.55%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.55%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.55%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.84%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.13%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.13%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.13%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.13%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.13%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.13%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.42%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.42%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.71%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.71%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.71%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005104	Soil and rhizosphere microbial communities from Laval, Canada - mgHAC	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012496	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.090610	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300024286	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK28	Environmental	Open in IMG/M
3300025558	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026025	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027401	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_02917410	2124908045	Soil	VTLQEKVDRLEDLRRRLEACQSLEEAVDLLAEFDSAAKELIDAVDKAKRESDAQP
ICCgaii200_08476932	2228664021	Soil	MTLQEKVDRLEQLRRQLDSCESLEDAVDLLAEFDAAAKDLIEAIDQAKREADARP
JGI10216J12902_1000545642	3300000956	Soil	MDIQQQVDHLEQLRQKLESCESLEQAVDLLGEFDAAAKELIDAIDRAKRGSDAHA*
JGI10216J12902_1019428502	3300000956	Soil	MTLHEKVDRLEELRRRLEQCESLEDAVDLLAEFDAAAKDLIEAIDKAKRETDAQP*
JGI10216J12902_1023145502	3300000956	Soil	MTLQEKVDRLEELRRQLEGCESLEDALDLLAEFDTAAKDLIDAIDQAKRETDAQP*
JGI10216J12902_1047267012	3300000956	Soil	VTLQEKVDRLEELRRRLEACESLEDAVDLLAEFDAAAKDLIEAIDQAKREADAQP*
JGI10216J12902_1052649993	3300000956	Soil	VDDQDQLDHLEQQIDHLEQLRQKLDACETLEEAVDLLGEFDAAAKELVDSIDRGKRESDANA*
JGI10216J12902_1064558072	3300000956	Soil	MSQLQDKVDRLEELRRRLEACGSLEDAVELLAEFDTAAKELIEAIDEAKREADA*
JGI10216J12902_1121317692	3300000956	Soil	VTLQEKVDRLEDLRRRLEACQSLEEAVDLLAEFDAAAKELIDAIDQAKRESDAQP*
Ga0055471_103101842	3300003987	Natural And Restored Wetlands	MTLQEKVDRLEKLRRKLESCESLEEAVDLLAEFDAAAKDLIEAIDQAKREADAQP*
Ga0055439_100935642	3300004019	Natural And Restored Wetlands	MTLQEKVDRLEALRKQLETCESLEEAVDLLAEFDAAAKDLIEAIDQAKREADAQP*
Ga0062593_1000019676	3300004114	Soil	MTLQEKVDRLEQLRRQLEGCESLEDAVDLLAEFDTAAKELIEAIDQAKREADAQP*
Ga0062593_1015174562	3300004114	Soil	VSDLNEQVDRLEQLRVKLESCESLEQAVDLLAEFDVAAKDLIESIDRAKRDADAHA*
Ga0062593_1015800302	3300004114	Soil	MDIQEQVDNLEQLRQKLESCESLEEAVELLGEFDAAAKELIDAIDRAKRESDAHA*
Ga0062593_1025505851	3300004114	Soil	MSEMNIEAQVDRLEQLRQKLEGCESLEQAVDLLGEFDAAAKQLIDAIDRAKRESDAHS*
Ga0063356_1012607462	3300004463	Arabidopsis Thaliana Rhizosphere	MTLQEKVDRLEQLRRQLDSCESLEDAVDLLAEFDAAAKDLIEAIDQAKREADAQP*
Ga0063356_1021839612	3300004463	Arabidopsis Thaliana Rhizosphere	MTLQEKVDRLEALRKQLESCRSLEEAVDLLAEFDAAAKDLIEAIDQAKREADAQP*
Ga0062595_1000365223	3300004479	Soil	MTIQEQVDRLEQLRQKLEGCESLEEAVDLLGEFDAAAKELIESIDRAKRESDAHA*
Ga0062595_1004251712	3300004479	Soil	VTLQEKVDRLEDLRRRLEACQSLEEAVDLLAEFDSAAKELIDAVDKAKRESDAQP*
Ga0062595_1022367872	3300004479	Soil	VSEMNIEAQVDRLEQLRQKLEGCESLEEAVDLLGEFDAAAKELIDAIDRAKRDSDARA*
Ga0062591_1016572642	3300004643	Soil	MTLDEQIDRLEQLRLKLEGCESLEQAVDLLAEFDVAAKDLIETIDRAKRDADAHS*
Ga0062594_1008692592	3300005093	Soil	MTLQEKVDRLEELRRQLEGCESLEDAVDLLAEFDAAAKDLIDAIDQAKRESDAQP*
Ga0062594_1014050982	3300005093	Soil	MDIQGQVDHLEQLRQKLESCESLEDAVGLLGEFDAAAKELIDAIDRAQRESDAHA*
Ga0066818_10174062	3300005104	Soil	VSEMDIEAQIDRLEQLRQKLEGCESLEDAVGLLSEFDAAAKELIDAIDRAKRESDAHA*
Ga0066815_101047732	3300005164	Soil	VSEMNIEAQVDRLEQLRQKLEGCESLEEAVDLLGEFDAAAKELIDAIDRAKRESGAHS*
Ga0070690_1012410242	3300005330	Switchgrass Rhizosphere	EAQVDRLEQLRQKLEGCESLEQAVDLLGEFDAAAKQLIDAIDRAKRESDAHS*
Ga0066388_1019358933	3300005332	Tropical Forest Soil	MTLQEQVERLEELRRKLESCESREDAVDLLAEFDAAAKDLIEAIDQAKREVDAQP*
Ga0066388_1025753631	3300005332	Tropical Forest Soil	VTLQEKVDRLEDLRRRLEACESLEDAVDLLAEFDAAAKDLIEAIDEAKRESDAQP*
Ga0066388_1070384601	3300005332	Tropical Forest Soil	VTLQEKVDRLEELRRQLEACDSLEEAVDLLAEFDAAAKDLIDAIDAAKRESDAQP*
Ga0070660_1016156412	3300005339	Corn Rhizosphere	MSEMNIEAQVERLEQLRQKLEGCESLEQAVDLLGEFDAAAKQLIDAIDRAKRESDAHS*
Ga0070691_109549391	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	PRRDRPNGDGMTLQEKVDRLEELRRQLEGCESLEDAVDLLAEFDAAAKDLIDAIDQAKRESDAQP*
Ga0070687_1010503822	3300005343	Switchgrass Rhizosphere	MSEMNIEAQVDRLEQLRQKLEGCESLEQAVDLLGEFDAAAKQLIDAIDR
Ga0070692_106241221	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MTLQEKVDRLEELRRQLEGCESLEDAVDLLAEFDAAAKDLIDAIDQAKRESDAQS*
Ga0070669_1015000441	3300005353	Switchgrass Rhizosphere	MSEMNIEAQVDRLEQLRQKLEGCESLEQAVDLLGEFDAAAKQLIDAIDRA
Ga0070688_1014921511	3300005365	Switchgrass Rhizosphere	VTLQEKVDRLEELRRRLEGCESLEDAVDLLAEFDAAAKDLIDAIDEA
Ga0070714_1018378072	3300005435	Agricultural Soil	MTLQEKVDRLEELRRQLEGCESLEDAVDLLAEFDAAAKDLIGAIDQAKRESDAQP*
Ga0070701_107405251	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MSEMNIEAQVDRLEQLRQKLEGCESLEQAVDLLGEFDAAAKQLIDAIDRAKRES
Ga0070708_1011785411	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTLQEKVDRLEELRRRLEACESLEDAVDLLAEFDAAAKDLIEAIDQAKR
Ga0070662_1009248443	3300005457	Corn Rhizosphere	MTLQEKVDRLEQLRRQLDSCESLEDAVDLLAEFDAAAKDLIEAIDRAKREADARP*
Ga0073909_101507482	3300005526	Surface Soil	MTLQEKVDRLEHLRLQVEGCESLEDAVDLLAEFDTAAKELIEAIDQAKREADAQP*
Ga0070741_1001101416	3300005529	Surface Soil	MTLQEQVDRLEQLRLELERCESLESAVDLLAEFDAAAKALIDAIDQAKRESDAQP*
Ga0070741_100603452	3300005529	Surface Soil	VNIEEQVDRLEQLRRKLESCESLEEAVELLGEFDAAAKELIDSIDRAKREPGAHA*
Ga0070684_1005020293	3300005535	Corn Rhizosphere	VTLQEKVDRLEELRRKLEGCESLEDAVDLLAEFDAAAKDLIDAIDEAKRETDAQP*
Ga0070684_1015646442	3300005535	Corn Rhizosphere	VSEMNIEAQVDRLEQLRQKLEGCESLEEAVDLLGEFDAAAKELIDAIDRAKRDADARA*
Ga0070686_1011233272	3300005544	Switchgrass Rhizosphere	VSELDAQVDRLEQLRLKLESCESLEQAVDLLAEFDAAARDLIDSIDRAKRDSDAHA*
Ga0070665_1003975443	3300005548	Switchgrass Rhizosphere	MTLQEKVDRFEELRRQLEGCESLEDADDLLAEFDAAAKDLIDAIDQAKREADAHR*
Ga0070665_1021681502	3300005548	Switchgrass Rhizosphere	DRLEQLRLKLESCESLEEAVDLLGEFDTAAKELIDAIDRAKRENDAHA*
Ga0066905_1010875962	3300005713	Tropical Forest Soil	MTLQEKVDRLEELRRQLEGCESLEDAVDLLGEFDAAAKDLIEAIEKAKREADAQP*
Ga0066905_1014939582	3300005713	Tropical Forest Soil	MDIQEQVDHLEQLRQKLEACESLEEAVELLGEFDTAAKELIDAIDRAKRESDAHA*
Ga0066903_1011997391	3300005764	Tropical Forest Soil	VDIQEQVDHLEQLRQKLESCESLEEAVELLGEFDTAAKELIDAIDRAKRE
Ga0066903_1020958432	3300005764	Tropical Forest Soil	MTLQEKVDRLEELRRQLEGCESLEDAVDLLGEFDAAAKDLIEAIDQAKREADAQP*
Ga0075292_10480102	3300005887	Rice Paddy Soil	VSEMNIEAQVDRLEQLRQKLESCESLEEAVGLLGEFDAAAKELIDAIDRAKRESDAHS*
Ga0075289_10009335	3300005888	Rice Paddy Soil	VTLQEKVDRLEELRRQLEGCESLEDAVDLLAEFDAAAKDLIDAIDQAKRESDAQP*
Ga0081455_100680272	3300005937	Tabebuia Heterophylla Rhizosphere	MNLQEKVDRLEELRRKLERCESLEEAVDLLGEFDAAAKDLIEAIDHAKRQADVQP*
Ga0066652_1001335433	3300006046	Soil	MSLQEQVDRLEGLRRRLEACQSLEEAVDLLAEFDAAAKELIDAIDQAKRESDAQP*
Ga0074053_112792483	3300006575	Soil	VTLEEKVERLEELQSKVEACESLEEAVDLLAEVDAVVKDLIEAVQAKGEADAQP*
Ga0074049_128142462	3300006580	Soil	MSELDAQVDRLEQLRLKLESCDSLEQAVDLLAEFDAAAKDLIDSIDRAKREADAHA*
Ga0079222_102008342	3300006755	Agricultural Soil	VSIDEQVDRLEQLRLKLESCESLEQAVDLLGEFDAAAKELIDSIDRAKRESDAHA*
Ga0075428_1023747592	3300006844	Populus Rhizosphere	MNIQEQVDRLEQLRQKLESCESLEEAVDLLGEFDAAAKELIESIDRAKRESDAHA*
Ga0075434_1021323562	3300006871	Populus Rhizosphere	VTLQEKVDRLEDLRRRLEACQTLEEAVDLLAEFDAAAKELIDAIDQAKRETDAQP*
Ga0068865_1006708922	3300006881	Miscanthus Rhizosphere	MSELDAQVDRLEQLRLKLESCESLEQAVDLLAEFDAAARDLIDSIDRAKRDSDAHA*
Ga0068865_1009446621	3300006881	Miscanthus Rhizosphere	PARQRRARDAGKAMSEMNIEAQVDRLEQLRQKLEGCESLEQAVDLLGEFDAAAKQLIDAIDRAKRESDAHS*
Ga0075424_1011150822	3300006904	Populus Rhizosphere	VTLQEKVDRLEDLRRRLEACRSLEEAVDLLAEFDAAAKELIDAIDQAKREGDAQP*
Ga0075435_1002856573	3300007076	Populus Rhizosphere	VTLQEKVDRLEDLRRRLEACQTLEEAVDLLAEFDAAAKELIDAIDQAKREGDAQP*
Ga0105245_107048883	3300009098	Miscanthus Rhizosphere	MTLQEKVDRLEQLRRQLDSCESLEDAVDLLAEFDAAAKDLIEAIDQAKREEDAQP*
Ga0105243_122241683	3300009148	Miscanthus Rhizosphere	MSEMNIEAQVDRLEQLRQKLEGCESLEQAVDLLGEFDAAAKQLIDAIDRAGS
Ga0126376_121470232	3300010359	Tropical Forest Soil	MTLQEKVDRLEELRRQLEGCESLEDAVDLLAEFDAAAKELIEAIDQAKREADAQP*
Ga0126372_106739492	3300010360	Tropical Forest Soil	VTLQEKVDRLEDLRRRLEACESLEDAVDLLAEFDAAAKDLIQAIDEAKRESDAQP*
Ga0126377_100753174	3300010362	Tropical Forest Soil	MTLQEKVDRLEELRRQLEGCESLEDAVDLLAEFDAAAKELIEAIDQAKRETDAQP*
Ga0105239_106844613	3300010375	Corn Rhizosphere	LEQLRQKLEGCESLEQAVDLLGEFDAAAKQLIDAIDRAKRESDAHS*
Ga0105239_112329213	3300010375	Corn Rhizosphere	MDIQGQVDRLEQLRQRLEGCESLEEAVDLLGEFDAAAKQLIDAIDRAKRESDAHS*
Ga0105239_113500032	3300010375	Corn Rhizosphere	MDIQGQVDHLEQLRQKLESCESLEDAVGLLGEFDAAAKELIDAIDRAKRESDAHA*
Ga0105246_104332592	3300011119	Miscanthus Rhizosphere	VTLQEKVDRLEELRRRLEGCESLEDAVDLLAEFDAAAKDLIDAIDEAKRETDAQP*
Ga0105246_125971982	3300011119	Miscanthus Rhizosphere	VSELDGQVDRLEQLRLKLESCESLEEAVDLLGEFDTAAKELIDAIDRAKRENDAHA*
Ga0150984_1207534981	3300012469	Avena Fatua Rhizosphere	MSEMNIEGQVDRLEQLRQKLEGCESLEEAVDLLGEFDAAAKELIDTIDRAKRESDSHA*
Ga0157353_10286801	3300012496	Unplanted Soil	QRQAEELRRRLEACDSPEEAADLVTQFDAVVKDLIEAIDAAKREADAQP*
Ga0157308_100543691	3300012910	Soil	MTLQEKVDRLEQLRRQLEGCESLEDAVDLLAEFDTAAKELIEAIDQA
Ga0164303_103899223	3300012957	Soil	MTLQEKVDRFEELRRQLEGCESLEDADDLLAEFDAAAKDLIDAIDQAKREA
Ga0164302_110829532	3300012961	Soil	MSEMNIEAQVDRLEQLRQKLEGCESLEEAVDLLGEFDAAAKELIDAIDRAKRDSDARA*
Ga0164309_102682342	3300012984	Soil	MSEMNIEAQVDRLEQLRQKLEGCESLEQAVDLLGEFDAAAKELIDAIDRAKRESGAHS*
Ga0164308_104883942	3300012985	Soil	MDIEGQVDRLEQLRQKLEGCESLEEAVDLLGEFDAAAKELIDAIDRAKRESGAHS*
Ga0164304_107245932	3300012986	Soil	QVDRLEQLRQKLEGCESLEQAVDLLGEFDAAAKQLIDAIDRAKRESDAHS*
Ga0164305_111993681	3300012989	Soil	MTLDEQIDRLEQLRLKLEGCESLEQAVDLLAEFDTAAKDLIDTIDRAKRDADAHS*
Ga0157371_115076202	3300013102	Corn Rhizosphere	DRLEQLRLKLESCESLEQAVDLLAEFDAAARDLIDSIDRAKRDSDAHA*
Ga0157369_110135243	3300013105	Corn Rhizosphere	MTLQEKVDRLEELRRQLEGCESLEDAVDLLAEFDAAAKDLIDAIDQAKREADAHR*
Ga0163162_104238493	3300013306	Switchgrass Rhizosphere	MALQGKVDRLEQLLLAVEGCESLEDAVDLLAEFDTAAKELIEAIDQAKREADAQP*
Ga0163162_106429342	3300013306	Switchgrass Rhizosphere	MSEMNIEAQVDRLEQLRQKLEGCESLEQAVDLLGEFDTAAKQLIDAIDRAKRESDAHS*
Ga0163162_108122943	3300013306	Switchgrass Rhizosphere	MTLQEKVDRLEQLRRQLEGCESLEDADDLLAEFDAAAKDLIDAIDQAKREADAHR*
Ga0157377_112064682	3300014745	Miscanthus Rhizosphere	MSEMNIEAQVDRLEQLRQKLEGCESLEQAVDLLGEFDAAAKQLIDAIDRAKR
Ga0132257_1008129962	3300015373	Arabidopsis Rhizosphere	MTLQEKVDRLEQLRRQLEGGESLEDAVDLLAEFDTAAKELIEAIDQAKREADAQP*
Ga0187776_113383521	3300017966	Tropical Peatland	AGSGGMTLQEKVDRLEDLRRRLEACESLEDAVDLRAEFDAAAKELIEAIDAAKREGGDAQ
Ga0187765_103752231	3300018060	Tropical Peatland	LQEKVDRLEELRRRLEACGSLEEAVDLLAEFDAAAKELIDAIDAAKHEADAQP
Ga0173482_100901202	3300019361	Soil	MSEMNIEAQVDRLEQLRQKLEGCESLEQAVDLLGEFDAAAKQLIDAIDRAKRESDAHS
Ga0222622_100327074	3300022756	Groundwater Sediment	MTLQEKVDRLEELRRQLDSCASLEDAVDLLAEFDAAAKDLIEAIDQAKREADAQP
Ga0247664_10103763	3300024232	Soil	VTLQEKVDRLEELRRRLEGCESLEDAVDLLAEFDAAAKDLIDAIDEAKRETDAQP
Ga0247661_10406832	3300024254	Soil	VTLQEKVDRLEELRRKLGGCESLEDAVDLLAEFDAAAKDLIDAIDEAKRETDAQP
Ga0247687_10175943	3300024286	Soil	KVDRLEELRRKLGGCESLEDAVDLLAEFDAAAKDLIDAIDEAKRETDAQP
Ga0210139_10453322	3300025558	Natural And Restored Wetlands	MTLQEKVDRLEALRKQLETCESLEEAVDLLAEFDAAAKDLIEAIDQAKREADAQP
Ga0207642_101616022	3300025899	Miscanthus Rhizosphere	MTLQEKVDRLEELRRQLEGCESLEDAVDLLAEFDAAAKDLIDAIDQAKRESDAQP
Ga0207688_101061393	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VSELDGQVDRLEQLRLKLESCESLEEAVDLLGEFDTAAKELIDAIDRAKRENDAHA
Ga0207684_107463871	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTLQEKVDRLEELRRRLEGCESLEDAVDLLAEVDAAVKELIDAIE
Ga0207662_105153371	3300025918	Switchgrass Rhizosphere	MTLQEKVDRLEELRRQLEGCESLEDAVDLLAEFDAAAKDLIDAIDQAKRESDA
Ga0207649_103085332	3300025920	Corn Rhizosphere	MTLQEKVDRFEELRRQLEGCESLEDADDLLAEFDAAAKDLIDAIDQAKREADAHR
Ga0207649_105682382	3300025920	Corn Rhizosphere	MTLQEKVDRLEQLRRQLEGCESLEDAVDLLAEFDTAAKELIEAIDEAKREADAQP
Ga0207687_100661302	3300025927	Miscanthus Rhizosphere	MTLQEKVDRLEQLRRQLDSCESLEDAVDLLAEFDAAAKDLIEAIDQAKREEDAQP
Ga0207664_116792412	3300025929	Agricultural Soil	MTLQEKVDRLEELRRQLEGCESLEDAVDLLAEFDAAAKDLIGAIDQAKRESDAQP
Ga0207686_103118512	3300025934	Miscanthus Rhizosphere	MTLQEKVDRLEQLRRQLDSCESLEDAVDLLAEFDAAAKDLIDAIDQAKRESDAQP
Ga0207686_115909762	3300025934	Miscanthus Rhizosphere	VSGLDGQVDRLEQLRLKLESCESLEEAVDLLGEFDTAAKELIDAIDRAKRENDAHA
Ga0207670_106387282	3300025936	Switchgrass Rhizosphere	GMTLQEKVDRLEELRRQLEGCESLEDAVDLLAEFDTAAKELIEAIDQAKREADAQP
Ga0207704_116811921	3300025938	Miscanthus Rhizosphere	MTLQEKVDRLEQLRRQLDSCESLEDAVDLLAEFDAAAKDLIEAIDQAKREADAQP
Ga0207661_117495542	3300025944	Corn Rhizosphere	DAREGRGVSEMQDKVDRLEALRIKLEGCESLEEAVDLLAEFDAAAKELIDAIDLAKRESDAHA
Ga0207677_101486113	3300026023	Miscanthus Rhizosphere	MTLQEKVDRLEELRRQLEGCESLEDAADLLAEFDAAAKDLIDAIDQ
Ga0208778_10073542	3300026025	Rice Paddy Soil	VTLQEKVDRLEELRRQLEGCESLEDAVDLLAEFDAAAKDLIDAIDQAKRESDAQP
Ga0207708_105275211	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	GDGMTLQEKVDRLEELRRQLEGCESLEDAVDLLAEFDAAAKDLIDAIDQAKRESDAQP
Ga0207702_104228623	3300026078	Corn Rhizosphere	GRMTLQEKVDRLEQLRRQLEGCESLEDAVDLLAEFDTAAKELIEAIDQAKREADAQP
Ga0207698_122024701	3300026142	Corn Rhizosphere	DGQVDRLEQLRLKLESCESLEEAVDLLGEFDTAAKELIDAIDRAKRENDAHA
Ga0208637_10274172	3300027401	Soil	VSEMNIEAQVDRLEQLRQKLEGCESLEEAVDLLGEFDAAAKELIDAIDRAKRESGAHS
Ga0209811_100375493	3300027821	Surface Soil	VSEMNIEAQVDRLEQLRQKLEGCESLEEAVDLLGEFDAAAKELIDAIDRAKRESDAHA
Ga0209811_102774662	3300027821	Surface Soil	MTLQEKVDRLEHLRLQVEGCESLEDAVDLLAEFDTAAKELIEAIDQAKREADAQP
Ga0207428_104765492	3300027907	Populus Rhizosphere	MTLQEKVDRLEQLRRQLEGCESLEDAVDLLAEFDTAAKELIEAIDQAKREADAQP
Ga0268266_109693412	3300028379	Switchgrass Rhizosphere	GGCVSELDGQVDRLEQLRLKLESCESLEEAVDLLGEFDTAAKELIDAIDRAKRENDAHA
Ga0268265_120265972	3300028380	Switchgrass Rhizosphere	MTLQEKVDRLEQLRRQLDGCESLEDAVDLLAEFDAAAKDLIEAIDRAKREADARP
Ga0247828_101357253	3300028587	Soil	VSEMDIQGQVDRLEQLRQRLEGCESLEEAVDLLGEFDAAAKQLIDAIDRAKRESDAHS
Ga0307276_102121071	3300028705	Soil	AVNINEQVERLEQLRQKLEGCESLEDAVDLLGEFDAAAKELIESIDRAKRESDAHA
Ga0307303_100109282	3300028713	Soil	VNINEQVERLEQLRQKLEGCESLEDAVDLLGEFDAAAKELIESIDRAKRESDAHA
Ga0247824_103272363	3300028809	Soil	VSEMDIRGQVDRLEQLRQRLEGCESLEEAVDLLGEFDAAAKQLIDAIDRAKRESDAHS
Ga0307304_103886921	3300028885	Soil	QVERLEQLRQKLEGCESLEDAVDLLGEFDAAAKELIESIDRAKRESDAHA
Ga0247826_101096362	3300030336	Soil	VSEMQDKVDRLEALRIKLEGCESLEEAVDLLAEFDAAAKELIDAIDLAKRESDAHA
Ga0307498_103919222	3300031170	Soil	VTLQEKVDRLEELRRKLEGCESLEDAVDLLAEFDAAAKDLIDAVDEAKRETDARP
Ga0307497_100936692	3300031226	Soil	VSEMDIQGQVDRLERLRQKLEGCESLEEAVDLLGEFDAAAKQLIDAIDRAKRESDAHS
Ga0307497_101133933	3300031226	Soil	VTLQEKVDRLEELRRKLEGCESLEDAVDLLAEFDAAAKDLIDAVGEAKRETDARP
Ga0265320_102622062	3300031240	Rhizosphere	MSLEDQVDRLEALRLKLEGCESLEEAVDLLAEFDSAAKDLIDSIDRAKRESDAHA
Ga0307506_101029412	3300031366	Soil	MSDLDAQIDRLEQLRAKLEECESLEQAVDLLTEFDAAAKSLIDAIDRAKREADAQP
Ga0310906_112676061	3300032013	Soil	RDRKGGCVSELDGQVDRLEQLRLKLESCESLEEAVDLLGEFDTAAKELIDAIDRAKRENDAHA
Ga0315281_112947531	3300032163	Sediment	RAGGGLTLQEQVDRLDALRQKLEACTSLEEAVELLGEFDTAAKELIDSIDQAKREADAQP
Ga0307470_107682273	3300032174	Hardwood Forest Soil	MTLQEKVDRLEQLRRQLDSCESLEDAVDLLAEFDAAAKDLIEAIDQA
Ga0335084_103144292	3300033004	Soil	VTLQEKVDRLEELRRKLEECESLEDAVELLAEFDAAAKDLIEAIDAAKQEGPDAQP
Ga0335084_108792912	3300033004	Soil	VTLQEKVDRLEELRRRLEACGSLEDAVDLLAEFDAAAKDLIEAIDSAKHEGGDAQP
Ga0335084_122975931	3300033004	Soil	RRGRDADGVTLQEKVDRLEELRHRLEECESLEDAVDLLAEFDAAAKDLIEAIDAAKREGGDAQP
Ga0247829_113914752	3300033550	Soil	GIGARRGRDANGVTLQEKVDRLEELRRKLEACETLEDAVDLLAEFDAAAKDLIEAIDQAKREADAQP
Ga0247830_103161513	3300033551	Soil	MTLQEKVDRLEQLRRQLDSCESLEDAVDLLAEFDAAAKDLIEAIDRAKREADARP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053282

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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