Metagenome / Metatranscriptome Family F053368

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053368
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	57 residues
Representative Sequence	MSVHIVDDEQRSDRRATPMRPSGSGGAGASAALALLDDVPRHRLRRAALHLPPRRSERGP
Number of Associated Samples	77
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	87.59 %
% of genes near scaffold ends (potentially truncated)	65.25 %
% of genes from short scaffolds (< 2000 bps)	56.03 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.688 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (34.043 % of family members)
Environment Ontology (ENVO)	Unclassified (53.191 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (54.610 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 40.91% β-sheet: 0.00% Coil/Unstructured: 59.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF14534	DUF4440	2.86
PF00756	Esterase	2.14
PF01565	FAD_binding_4	2.14
PF01258	zf-dskA_traR	2.14
PF02738	MoCoBD_1	2.14
PF01925	TauE	1.43
PF13432	TPR_16	1.43
PF04055	Radical_SAM	1.43
PF13180	PDZ_2	1.43
PF00005	ABC_tran	1.43
PF00248	Aldo_ket_red	1.43
PF02803	Thiolase_C	1.43
PF07690	MFS_1	1.43
PF01098	FTSW_RODA_SPOVE	1.43
PF00226	DnaJ	1.43
PF00092	VWA	0.71
PF16537	T2SSB	0.71
PF04358	DsrC	0.71
PF13474	SnoaL_3	0.71
PF13349	DUF4097	0.71
PF16921	Tex_YqgF	0.71
PF07228	SpoIIE	0.71
PF13493	DUF4118	0.71
PF13483	Lactamase_B_3	0.71
PF10101	DUF2339	0.71
PF03576	Peptidase_S58	0.71
PF06983	3-dmu-9_3-mt	0.71
PF16576	HlyD_D23	0.71
PF13646	HEAT_2	0.71
PF05015	HigB-like_toxin	0.71
PF01927	Mut7-C	0.71
PF01451	LMWPc	0.71
PF13510	Fer2_4	0.71
PF12796	Ank_2	0.71
PF13545	HTH_Crp_2	0.71
PF13620	CarboxypepD_reg	0.71
PF00135	COesterase	0.71
PF02566	OsmC	0.71
PF02371	Transposase_20	0.71
PF00318	Ribosomal_S2	0.71
PF14559	TPR_19	0.71
PF02954	HTH_8	0.71
PF08668	HDOD	0.71
PF08327	AHSA1	0.71
PF04389	Peptidase_M28	0.71
PF10659	Trypan_glycop_C	0.71
PF06050	HGD-D	0.71
PF00485	PRK	0.71
PF17202	sCache_3_3	0.71
PF07136	DUF1385	0.71
PF02730	AFOR_N	0.71
PF00464	SHMT	0.71
PF00076	RRM_1	0.71
PF13899	Thioredoxin_7	0.71
PF04551	GcpE	0.71
PF01066	CDP-OH_P_transf	0.71
PF05225	HTH_psq	0.71
PF01058	Oxidored_q6	0.71
PF16861	Carbam_trans_C	0.71
PF12704	MacB_PCD	0.71
PF12974	Phosphonate-bd	0.71
PF04321	RmlD_sub_bind	0.71
PF00291	PALP	0.71
PF04366	Ysc84	0.71
PF08753	NikR_C	0.71
PF00329	Complex1_30kDa	0.71
PF03699	UPF0182	0.71
PF08501	Shikimate_dh_N	0.71
PF08530	PepX_C	0.71
PF02913	FAD-oxidase_C	0.71
PF13577	SnoaL_4	0.71
PF13419	HAD_2	0.71
PF02515	CoA_transf_3	0.71
PF02361	CbiQ	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	2.14
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	1.43
COG0451	Nucleoside-diphosphate-sugar epimerase	Cell wall/membrane/envelope biogenesis [M]	1.43
COG0702	Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains	General function prediction only [R]	1.43
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	1.43
COG0772	Peptodoglycan polymerase FtsW/RodA/SpoVE	Cell cycle control, cell division, chromosome partitioning [D]	1.43
COG1086	NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC	Cell wall/membrane/envelope biogenesis [M]	1.43
COG3191	L-aminopeptidase/D-esterase	Amino acid transport and metabolism [E]	1.43
COG0052	Ribosomal protein S2	Translation, ribosomal structure and biogenesis [J]	0.71
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	0.71
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.71
COG0169	Shikimate 5-dehydrogenase	Amino acid transport and metabolism [E]	0.71
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.71
COG0377	NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase	Energy production and conversion [C]	0.71
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.71
COG0619	ECF-type transporter transmembrane protein EcfT	Coenzyme transport and metabolism [H]	0.71
COG0821	4-hydroxy-3-methylbut-2-enyl diphosphate synthase IspG/GcpE	Lipid transport and metabolism [I]	0.71
COG0852	NADH:ubiquinone oxidoreductase 27 kD subunit (chain C)	Energy production and conversion [C]	0.71
COG0864	Metal-responsive transcriptional regulator, contains CopG/Arc/MetJ DNA-binding domain	Transcription [K]	0.71
COG1087	UDP-glucose 4-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.71
COG1088	dTDP-D-glucose 4,6-dehydratase	Cell wall/membrane/envelope biogenesis [M]	0.71
COG1089	GDP-D-mannose dehydratase	Cell wall/membrane/envelope biogenesis [M]	0.71
COG1090	NAD dependent epimerase/dehydratase family enzyme	General function prediction only [R]	0.71
COG1091	dTDP-4-dehydrorhamnose reductase	Cell wall/membrane/envelope biogenesis [M]	0.71
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.71
COG1615	Uncharacterized membrane protein, UPF0182 family	Function unknown [S]	0.71
COG1656	Uncharacterized conserved protein, contains PIN-related Mut7-C RNAse domain	General function prediction only [R]	0.71
COG1740	Ni,Fe-hydrogenase I small subunit	Energy production and conversion [C]	0.71
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.71
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.71
COG1775	Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB	Amino acid transport and metabolism [E]	0.71
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.71
COG1941	Coenzyme F420-reducing hydrogenase, gamma subunit	Energy production and conversion [C]	0.71
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.71
COG2414	Aldehyde:ferredoxin oxidoreductase	Energy production and conversion [C]	0.71
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.71
COG2920	Sulfur transfer complex TusBCD TusE component, DsrC family (tRNA 2-thiouridine synthesizing protein C)	Translation, ribosomal structure and biogenesis [J]	0.71
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.71
COG2936	Predicted acyl esterase	General function prediction only [R]	0.71
COG3260	Ni,Fe-hydrogenase III small subunit	Energy production and conversion [C]	0.71
COG3262	Ni,Fe-hydrogenase III component G	Energy production and conversion [C]	0.71
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.71
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.71
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.71
COG3872	Uncharacterized conserved protein YqhQ, DUF1385 family	Function unknown [S]	0.71
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.69 %
Unclassified	root	N/A	16.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.69 %
Unclassified	root	N/A	16.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.69 %
Unclassified	root	N/A	16.31 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	38.30 %
Unclassified	root	N/A	16.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.22 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.84 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.13 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	34.04 %
Unclassified	root	N/A	16.31 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	5.67 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.84 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.42 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.42 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.04 %
Unclassified	root	N/A	16.31 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5.67 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	1.42 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.42 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.71 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.71 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.04 %
Unclassified	root	N/A	16.31 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.42 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	0.71 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.71 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.71 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.71 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.04 %
Unclassified	root	N/A	16.31 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.42 %
unclassified Phycisphaerales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales	0.71 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.71 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.71 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.71 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.04 %
Unclassified	root	N/A	16.31 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.42 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.71 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.71 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	0.71 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.71 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	34.04 %
Unclassified	root	N/A	16.31 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1.42 %
Nonomuraea jiangxiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea jiangxiensis	0.71 %
Nocardia veterana	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia veterana	0.71 %
Phycisphaerales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	0.71 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.71 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.71 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_106923141	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	917	Open in IMG/M
3300004014\|Ga0055456_10248741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300004066\|Ga0055484_10148025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300004152\|Ga0062386_101430330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia veterana	576	Open in IMG/M
3300005204\|Ga0068997_10097061	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300005205\|Ga0068999_10057224	Not Available	703	Open in IMG/M
3300006224\|Ga0079037_100014902	All Organisms → cellular organisms → Bacteria → Proteobacteria	5258	Open in IMG/M
3300006930\|Ga0079303_10283999	Not Available	681	Open in IMG/M
3300009506\|Ga0118657_10448254	All Organisms → cellular organisms → Bacteria	1684	Open in IMG/M
3300009506\|Ga0118657_10476747	All Organisms → cellular organisms → Bacteria	2096	Open in IMG/M
3300009506\|Ga0118657_10577153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1440	Open in IMG/M
3300009506\|Ga0118657_11417911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300009549\|Ga0116137_1004191	All Organisms → cellular organisms → Bacteria	7389	Open in IMG/M
3300009614\|Ga0116104_1016113	All Organisms → cellular organisms → Bacteria	2115	Open in IMG/M
3300009614\|Ga0116104_1057052	Not Available	836	Open in IMG/M
3300009617\|Ga0116123_1073081	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	941	Open in IMG/M
3300009618\|Ga0116127_1013518	All Organisms → cellular organisms → Bacteria	2826	Open in IMG/M
3300009629\|Ga0116119_1057747	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300009631\|Ga0116115_1045511	All Organisms → cellular organisms → Bacteria → Acidobacteria	1175	Open in IMG/M
3300009634\|Ga0116124_1019645	Not Available	2210	Open in IMG/M
3300009760\|Ga0116131_1006165	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5223	Open in IMG/M
3300009760\|Ga0116131_1014542	All Organisms → cellular organisms → Bacteria	3017	Open in IMG/M
3300009760\|Ga0116131_1024012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2170	Open in IMG/M
3300009760\|Ga0116131_1024194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2160	Open in IMG/M
3300010131\|Ga0115594_1211633	Not Available	598	Open in IMG/M
3300010302\|Ga0116202_10506679	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300010413\|Ga0136851_10265734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1750	Open in IMG/M
3300012212\|Ga0150985_104188261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1163	Open in IMG/M
3300012931\|Ga0153915_12508684	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300012931\|Ga0153915_13006282	Not Available	549	Open in IMG/M
3300014494\|Ga0182017_10564255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300014496\|Ga0182011_10233236	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1241	Open in IMG/M
3300014502\|Ga0182021_10006125	All Organisms → cellular organisms → Bacteria	14286	Open in IMG/M
3300014502\|Ga0182021_10012260	All Organisms → cellular organisms → Bacteria	10185	Open in IMG/M
3300014502\|Ga0182021_10020881	All Organisms → cellular organisms → Bacteria	7749	Open in IMG/M
3300014502\|Ga0182021_10035423	All Organisms → cellular organisms → Bacteria	5858	Open in IMG/M
3300014502\|Ga0182021_10167343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2563	Open in IMG/M
3300014502\|Ga0182021_10369149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1699	Open in IMG/M
3300014502\|Ga0182021_11984862	Not Available	700	Open in IMG/M
3300014502\|Ga0182021_12131762	Not Available	675	Open in IMG/M
3300014839\|Ga0182027_10238268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2087	Open in IMG/M
3300014839\|Ga0182027_11822805	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300017929\|Ga0187849_1012760	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5355	Open in IMG/M
3300017929\|Ga0187849_1016206	All Organisms → cellular organisms → Bacteria	4449	Open in IMG/M
3300017929\|Ga0187849_1057215	Not Available	1789	Open in IMG/M
3300017929\|Ga0187849_1260608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300017929\|Ga0187849_1309508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300017931\|Ga0187877_1009422	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6292	Open in IMG/M
3300017931\|Ga0187877_1013421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4847	Open in IMG/M
3300017931\|Ga0187877_1028983	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2799	Open in IMG/M
3300017938\|Ga0187854_10008198	All Organisms → cellular organisms → Bacteria	6928	Open in IMG/M
3300017938\|Ga0187854_10012281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5231	Open in IMG/M
3300017940\|Ga0187853_10006428	All Organisms → cellular organisms → Bacteria	7894	Open in IMG/M
3300017940\|Ga0187853_10009186	All Organisms → cellular organisms → Bacteria	6212	Open in IMG/M
3300017940\|Ga0187853_10011623	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5332	Open in IMG/M
3300017940\|Ga0187853_10050423	All Organisms → cellular organisms → Bacteria	2136	Open in IMG/M
3300017941\|Ga0187850_10255684	Not Available	786	Open in IMG/M
3300017944\|Ga0187786_10230387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300017944\|Ga0187786_10328459	Not Available	638	Open in IMG/M
3300018004\|Ga0187865_1016118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3742	Open in IMG/M
3300018005\|Ga0187878_1002025	All Organisms → cellular organisms → Bacteria	18588	Open in IMG/M
3300018005\|Ga0187878_1002816	All Organisms → cellular organisms → Bacteria	14998	Open in IMG/M
3300018005\|Ga0187878_1002816	All Organisms → cellular organisms → Bacteria	14998	Open in IMG/M
3300018005\|Ga0187878_1003197	All Organisms → cellular organisms → Bacteria	13750	Open in IMG/M
3300018005\|Ga0187878_1003558	All Organisms → cellular organisms → Bacteria	12740	Open in IMG/M
3300018005\|Ga0187878_1004505	All Organisms → cellular organisms → Bacteria	10821	Open in IMG/M
3300018005\|Ga0187878_1004802	All Organisms → cellular organisms → Bacteria	10299	Open in IMG/M
3300018005\|Ga0187878_1007580	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7340	Open in IMG/M
3300018005\|Ga0187878_1009108	All Organisms → cellular organisms → Bacteria	6372	Open in IMG/M
3300018005\|Ga0187878_1009205	All Organisms → cellular organisms → Bacteria	6320	Open in IMG/M
3300018005\|Ga0187878_1009942	All Organisms → cellular organisms → Bacteria	5940	Open in IMG/M
3300018005\|Ga0187878_1012978	All Organisms → cellular organisms → Bacteria	4858	Open in IMG/M
3300018005\|Ga0187878_1017934	All Organisms → cellular organisms → Bacteria	3837	Open in IMG/M
3300018005\|Ga0187878_1021213	All Organisms → cellular organisms → Bacteria	3400	Open in IMG/M
3300018005\|Ga0187878_1032210	All Organisms → cellular organisms → Bacteria	2546	Open in IMG/M
3300018013\|Ga0187873_1105482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1111	Open in IMG/M
3300018015\|Ga0187866_1314878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300018018\|Ga0187886_1085072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1351	Open in IMG/M
3300018018\|Ga0187886_1229975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300018018\|Ga0187886_1231316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300018019\|Ga0187874_10008191	All Organisms → cellular organisms → Bacteria	6291	Open in IMG/M
3300018025\|Ga0187885_10002947	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	15779	Open in IMG/M
3300018030\|Ga0187869_10030630	All Organisms → cellular organisms → Bacteria	2972	Open in IMG/M
3300018030\|Ga0187869_10278318	Not Available	807	Open in IMG/M
3300018040\|Ga0187862_10056941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2820	Open in IMG/M
3300018040\|Ga0187862_10356080	All Organisms → cellular organisms → Bacteria → Terrabacteria group	908	Open in IMG/M
3300018040\|Ga0187862_10434802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300018057\|Ga0187858_10006703	All Organisms → cellular organisms → Bacteria	10292	Open in IMG/M
3300018057\|Ga0187858_10024846	All Organisms → cellular organisms → Bacteria	4606	Open in IMG/M
3300018057\|Ga0187858_10533912	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	714	Open in IMG/M
3300018057\|Ga0187858_10658724	Not Available	627	Open in IMG/M
3300019265\|Ga0187792_1237891	Not Available	508	Open in IMG/M
3300022650\|Ga0236339_1262985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300025441\|Ga0208456_1038494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea jiangxiensis	951	Open in IMG/M
3300025446\|Ga0208038_1023956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1414	Open in IMG/M
3300025448\|Ga0208037_1057313	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300025469\|Ga0208687_1003325	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5955	Open in IMG/M
3300025469\|Ga0208687_1015294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2260	Open in IMG/M
3300025472\|Ga0208692_1008463	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3776	Open in IMG/M
3300025472\|Ga0208692_1032961	Not Available	1370	Open in IMG/M
3300025472\|Ga0208692_1051081	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300025548\|Ga0208716_1108694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300026463\|Ga0256815_1041441	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300027811\|Ga0256868_10235662	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → unclassified Phycisphaerales → Phycisphaerales bacterium	770	Open in IMG/M
3300027887\|Ga0208980_10664231	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	591	Open in IMG/M
3300027896\|Ga0209777_10365728	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1095	Open in IMG/M
3300030339\|Ga0311360_11098712	All Organisms → cellular organisms → Bacteria → Proteobacteria	627	Open in IMG/M
3300030613\|Ga0299915_10005764	All Organisms → cellular organisms → Bacteria	9101	Open in IMG/M
3300031902\|Ga0302322_100676770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1221	Open in IMG/M
3300031997\|Ga0315278_10233942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1895	Open in IMG/M
3300031997\|Ga0315278_11877978	Not Available	563	Open in IMG/M
3300032053\|Ga0315284_10002903	All Organisms → cellular organisms → Bacteria	24403	Open in IMG/M
3300032053\|Ga0315284_10024629	All Organisms → cellular organisms → Bacteria → Proteobacteria	8490	Open in IMG/M
3300032053\|Ga0315284_10057978	All Organisms → cellular organisms → Bacteria	5301	Open in IMG/M
3300032163\|Ga0315281_11701890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300032177\|Ga0315276_10831445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	987	Open in IMG/M
3300032342\|Ga0315286_11182605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300032401\|Ga0315275_10473531	Not Available	1403	Open in IMG/M
3300032401\|Ga0315275_10560151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1278	Open in IMG/M
3300032516\|Ga0315273_10003611	All Organisms → cellular organisms → Bacteria	18668	Open in IMG/M
3300033413\|Ga0316603_12042458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300033419\|Ga0316601_100309692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1449	Open in IMG/M
3300033419\|Ga0316601_101715584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300033433\|Ga0326726_11443415	Not Available	670	Open in IMG/M
3300033434\|Ga0316613_10137648	All Organisms → cellular organisms → Bacteria → Proteobacteria	1530	Open in IMG/M
3300033434\|Ga0316613_10344123	All Organisms → cellular organisms → Bacteria → Acidobacteria	994	Open in IMG/M
3300033434\|Ga0316613_10347781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	989	Open in IMG/M
3300033480\|Ga0316620_10932669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	841	Open in IMG/M
3300033481\|Ga0316600_10875818	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300033486\|Ga0316624_11168804	All Organisms → cellular organisms → Bacteria → Proteobacteria	699	Open in IMG/M
3300033487\|Ga0316630_10075932	All Organisms → cellular organisms → Bacteria	2162	Open in IMG/M
3300033487\|Ga0316630_10399033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1097	Open in IMG/M
3300033487\|Ga0316630_11893889	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300033487\|Ga0316630_11987046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300033513\|Ga0316628_100753543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1281	Open in IMG/M
3300033513\|Ga0316628_102565358	Not Available	672	Open in IMG/M
3300033557\|Ga0316617_100799396	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.29%
Host-Associated	Host-Associated	0.71%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	72.34%
Terrestrial	Environmental → Terrestrial	26.95%
Plants	Host-Associated → Plants	0.71%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	64.54%
Soil	Environmental → Terrestrial → Soil	24.11%
Marine	Environmental → Aquatic → Marine	7.09%
Peat	Environmental → Terrestrial → Peat	2.13%
Sediment	Environmental → Aquatic → Sediment	0.71%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.71%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	53.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	21.99%
Lake	Environmental → Aquatic → Freshwater → Lake	9.22%
Wetlands	Environmental → Aquatic → Marine → Wetlands	7.09%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	2.13%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.13%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.42%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	34.75%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	17.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.48%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.51%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	7.80%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	4.26%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.13%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.42%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.42%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.71%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.71%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.71%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	34.04%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	15.60%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	11.35%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	8.51%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	7.80%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.84%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	2.84%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.42%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.42%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.42%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.42%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.71%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.71%
Anoxic Lake Water	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water	0.71%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.71%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.71%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.71%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	0.71%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.71%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.71%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.71%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.71%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.71%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.71%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004014	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLA_D2	Environmental	Open in IMG/M
3300004066	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D2	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005204	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2	Environmental	Open in IMG/M
3300005205	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleC_D2	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009549	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100	Environmental	Open in IMG/M
3300009614	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150	Environmental	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009631	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300010131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_11_14_A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010302	Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 325m metaG	Environmental	Open in IMG/M
3300010413	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019265	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022650	Freshwater microbial communities from thermokarst lake SAS2a, Kuujjuarapick, Canada - Sample Winter W3	Environmental	Open in IMG/M
3300025441	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_100 (SPAdes)	Environmental	Open in IMG/M
3300025446	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100 (SPAdes)	Environmental	Open in IMG/M
3300025448	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100 (SPAdes)	Environmental	Open in IMG/M
3300025469	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025472	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100 (SPAdes)	Environmental	Open in IMG/M
3300025548	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300026463	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 CS6	Environmental	Open in IMG/M
3300027811	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227 HiSeq	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300030339	III_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental	Open in IMG/M
3300032342	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1069231411	3300001213	Wetland	MSKYIVDDEQRRYCLATPIRLGLRTQIPSGSGSAGASAALALLDDVHRHRLRRAA
Ga0055456_102487412	3300004014	Natural And Restored Wetlands	MSVHIVDDEQRSDRRATPMRPMGSGGAGASAALVLLDDVHRHCLRRTALHLPPRRSERDAS*
Ga0055484_101480251	3300004066	Natural And Restored Wetlands	PSWRFRGTSLTIVNNGQRKDRPQHMRPSGSGGTGASAALALLDDDHRHLLRRAAWHLPPWRSERDAS*
Ga0062386_1014303301	3300004152	Bog Forest Soil	RREEEAMQGIVDDEQRSDRRATPVRPSGSGVARASAALPLLDDAPHRLRRGALHLPTRRQERGPS*
Ga0068997_100970611	3300005204	Natural And Restored Wetlands	MRGIVDDEQRSDRRATPVRPSGSGGAGASASLALLDDGHRIVRRAALHLPPRRSERDTS*
Ga0068999_100572242	3300005205	Natural And Restored Wetlands	MRDIVDDEQRSDRRATPVRPSGSGGAGASASLALLDDGHRIVRRAALHLPPRRSERDSS*
Ga0079037_1000149026	3300006224	Freshwater Wetlands	MKIEGMLLHIVDDEQRSNRGAIPMRVPGGAGHLRRALLDDVQRHRLRRAASHLLPQRPGRGPS*
Ga0079303_102839992	3300006930	Deep Subsurface	MPLRIVDDEQRSDRRVTPMGPPGSGLAGASASLALLDDVHRHRLRRAA
Ga0115027_115385702	3300009131	Wetland	MREDEAMPVHIVEHEQRSDRPAIPVRPSDSRGPGASDALALLGDAHRNRLRRTAMHLPAR
Ga0118657_104482541	3300009506	Mangrove Sediment	MSMHIVDDEQRRNGLASPMRPMGYGGAETCAALVLLDDVHRHRLRRTALHLPPRRSER
Ga0118657_104767472	3300009506	Mangrove Sediment	MSMHIADDEQRSNCLTIPMRPMGYGAAGACAALVLLDDVHRHRLRRTALHLPPRRSERDAS*
Ga0118657_105771532	3300009506	Mangrove Sediment	MSMHIVDDKQRRNCLASPMRPMGYGGAGACAALVLLDDVHRHRLRRTALHLPPRRSERDAS*
Ga0118657_114179112	3300009506	Mangrove Sediment	MSMHIVDDEQRRDCLAIPMRPMGYGGAGACAALVLLDDVHRHRLGRTALHLPPRRSERDAS*
Ga0116128_10884621	3300009518	Peatland	MSMHIVDDEQRSDRRATPMRPLGSGLEGASASLALLDDVHRHR
Ga0116137_10041911	3300009549	Peatland	MSMHIVDDEQRSDRRATPTRPLGSGLEGASASLALLDDVHRHRLRRAALHLPLPSQERG
Ga0116104_10161131	3300009614	Peatland	MSMHIVDDEQRSDRHATPMRPPGSGLEGASASLALLDDVHRHRLRRAALHLPLPSQER
Ga0116104_10570523	3300009614	Peatland	DRRPTPMRPLGSGLEGASASLALIDDVRRHRLRRAALHLPLPSQEHGPFQFSDRLLVQA*
Ga0116123_10431343	3300009617	Peatland	MSMHIVDDEQRSDRRPTPMRPLGSGLEGASASLALLDDVHRHRL
Ga0116123_10730812	3300009617	Peatland	MSMHIVDDEQRSDRRATPMRPLGSGLEGASASLALLDDVHRHRLRR
Ga0116127_10135181	3300009618	Peatland	MYIVDDEQRSDRRPTPMRPLGSGLEGASASLALLDDVHRHRLRRAALHLPLPSQERGP
Ga0116119_10577473	3300009629	Peatland	MSMHIVDDEQRRDRRATPMRPPGSGLEGASASLALLDDVPRHRLRRAALHLPLP
Ga0116115_10455111	3300009631	Peatland	MSMHIVDDEQRSDRRATPMRPSGSGLEGASASLALLDDVHRHRLRRAALHLPLPSQ
Ga0116124_10196452	3300009634	Peatland	MSMHIVDDEKRIDRRAAPMRPSGSGLEGASASQALLDDVHRHRLRRAALHLHLPS*
Ga0116131_10061655	3300009760	Peatland	MSVHIVDDEQRSDRRATPMRPLGSGLEGASASLALLDDVHRHRLRRAALHLPLPSQERG
Ga0116131_10145426	3300009760	Peatland	MYIVDDEQRSDRRPTPMRPLGSGLEGASASLALLDNVHRHRLRRAALHLPLPSQE
Ga0116131_10240121	3300009760	Peatland	MSMHIVDDEQRSDRRPTPMRPLGSGLEGASASLALLDDVHRHRLRRAALHLPLPSQE
Ga0116131_10241945	3300009760	Peatland	MHIVDDEQRRDRRATPMRPPGSGLEGASASLALLDDVPRHRLRRAALHLPLPSQERGPFQ
Ga0115594_12116332	3300010131	Wetland	MPLHIVDDERRCDRRVIPTRPLDSSLAGASAMSALLGDVQRHLLRRAALHLPPRRQERGPC*
Ga0116202_105066792	3300010302	Anoxic Lake Water	MSVHIIDDEQRSDRRATPVRPSGSGGAGASAALALLDDVHRHRLCRAAWHLPPRRSERGPA*
Ga0136851_102657342	3300010413	Mangrove Sediment	MSMHVVDDEQRRDCLTISMRPMGYGGAGACAALVLLDDVHRHRLRRTALHLPPRRSERDAS*
Ga0150985_1041882612	3300012212	Avena Fatua Rhizosphere	MPQRIANDEQRRDRPATPVRPAGSGGVPASAALPLLDNARRHCLRRGALPL
Ga0153915_125086842	3300012931	Freshwater Wetlands	MSVHIVDDEQRRDRRATPCNPVRPSGSGLAGTSAALALLDDVHRHRLR
Ga0153915_130062822	3300012931	Freshwater Wetlands	MASARREEEAMSMHIVDDEQRSDRRAIPMRPSGSGVAGASAALSLLDDVHRHRLRRAALHLP
Ga0182017_105642551	3300014494	Fen	MSVHIVDDEQRGDRPATPVRPSGSGGTGASAALALLDDVQRHRLRRAALPLPPRRSEHGPS*
Ga0182011_102332362	3300014496	Fen	MSMHIVDDEQRGDRPATPMRPSGSGGAGASAALALLDDVHRHRLRRAALHLPPRRSERGPS*
Ga0182021_1000612510	3300014502	Fen	MSMNIVDDEQRGDRPATPMRPSGSGGAGASAALALLDDVHRHHLRRAALHLPPRRSERGPS*
Ga0182021_100122607	3300014502	Fen	MSLYIVDDEQRRDRPATPMRPSGSGGTGASAALALLDDVQRHRLRRAALHLPPRRSERGPS*
Ga0182021_100208816	3300014502	Fen	RGDRPATPMRPSGSGGAGASAALALLDDVHRHRLRRAALHLPPRRSERGPS*
Ga0182021_100354231	3300014502	Fen	MSMHIVDGEQRGDRSASPMRPSGSGGAGASAALALLDDVHRHRLRRAALHLPPRRSE
Ga0182021_101673432	3300014502	Fen	MSLHIVDDEQRGDRPATPMRPSGSGGAGASAALALLDDVHRHRLRRAALHLPPRRSE
Ga0182021_103691491	3300014502	Fen	MSMHIVDDEQRGDRPAIPMRPSGSGGAGASAALALLDDVPRHRLRRAALHLPPRRSERGSS*
Ga0182021_119848622	3300014502	Fen	MSLHIVDDEQRGDRPASPMRPSGSGGAGASAALALLDDVQRHRLRRAALHLPPRRSERGP
Ga0182021_121317621	3300014502	Fen	SRREEEAMSLHIVDDEQRRDRPATPMRPSSSGGAGASAALALLDDVQRHRLRRAALHLPPRRSERDPS*
Ga0182027_102382682	3300014839	Fen	MSLHIVDDEQRGDRPASPMRPSGSGGAGASAALALLGDVQRHRLRRAALHLPPRRSERGPS*
Ga0182027_118228052	3300014839	Fen	EEEAMSMHIVDDEQRRDRPATPMRLSGSGGAGASAALALLDDVQRHRLRRAALHLPLRRSERGPS*
Ga0187849_10127605	3300017929	Peatland	MSVHIVDDEQRSDRRATPMRPLGSGLEGASASLALLDDVHRHRLRR
Ga0187849_10162066	3300017929	Peatland	MHIVDDEQRSDRRPTPMRPLGSGLEGASASLALLDDVHRHRLRRAALHLPLPSQERG
Ga0187849_10572153	3300017929	Peatland	MSMHIVDDEQRRDRRATPMRPLGSGLEGASASLALLDDVHRHRLRRAAL
Ga0187849_12606081	3300017929	Peatland	MHIVDDEQRSDRHATPMRPPGSGLEGASASLALLDDVHRHRLRRAALHLPLPSQER
Ga0187849_13095082	3300017929	Peatland	MHIVDDEQRSDRRATPMRPLGSGLEGASASLALLDDVHRHRLRRA
Ga0187877_10094221	3300017931	Peatland	MSVHIVDDEQRSDRRATPMRPLGSGLEGASASLALLDDVHRHRLRRAALHLP
Ga0187877_10134217	3300017931	Peatland	MSMHIVDDEQRSDRRASPMRPLGSGLEGASASLALLDDVHRHRLRRAALHLPLPSQE
Ga0187877_10289831	3300017931	Peatland	MHIVDDEQRSDRRATPMRPSGSGLEGASASLALLDDVHRHRLRRAALHLPLPSQERGPFQ
Ga0187854_100081988	3300017938	Peatland	MSMHIVDDEQRSDRRASPMRPLGSGLEGASASLALLDDVHRHRLRR
Ga0187854_100122811	3300017938	Peatland	MSMHIVDDEQRSDRRASPMRPSGSGLEGASASLALLDDVHRHRLRRAALHL
Ga0187853_1000642812	3300017940	Peatland	MHIVDDEQRSDRRPTPMRPLGSGLEGASASLALLDDVHRHRLRRAALHLPLPSQERGPFQFSD
Ga0187853_100091868	3300017940	Peatland	MYIVDDEQRSDRRPTPMRPLGSGLEGASASLALLDDVHRHRLRRAALHLPLPSQ
Ga0187853_100116235	3300017940	Peatland	MSVHIVDDEQRSDRRATPMRPLGSGLEGASASLALLDDVHRHRLRRAAL
Ga0187853_100504231	3300017940	Peatland	MSMHIVDDEQRRDRRATPMRPLGSGLEGASASLALLDDVHRHRLRRAALHLPLPSQ
Ga0187850_102556842	3300017941	Peatland	MYIVDGEQRRDRLASPMRPSGSGGAGAIGTRALLDDVPRHRLRRAALHLPPRRSERGPS
Ga0187786_102303871	3300017944	Tropical Peatland	MSMHIVDDEQRSDRRAIPMRPSGSGGTGASASLALLDDVHRHRLRRAASHLPPW
Ga0187786_103284592	3300017944	Tropical Peatland	EAMSKHIVDDEQRSDRRVTPMRPLGSGLAGAYASLALLDDVPRHRLRRAA
Ga0187865_10161181	3300018004	Peatland	MSMHIVDDEQRSDRRATPMRPLGSGWEGASASLALLDDVHRHRL
Ga0187878_10020251	3300018005	Peatland	MSVHIVDDEQRSDRRASPMRPSGSGGAGASAALALLDDVPRHRLRRAASHLPPRRSERGP
Ga0187878_100281613	3300018005	Peatland	MSVHIVDDEQRRVRLATPMRPSGSGGAGASAALALLDDAPRHRLRRAAWHLPPRRSERGP
Ga0187878_10028169	3300018005	Peatland	MSVYIVDDEQRRDRLATPMRPSGSGGAGASAALALLDDVPRHRLRRAALNLPPRRSERGP
Ga0187878_100319713	3300018005	Peatland	MSVHIVDDEQRRDRLQSPCALRVPGALLDDVPRHRLRRAALHLPPRRSERGPS
Ga0187878_10035585	3300018005	Peatland	MSGHIVDDEQRKDRPATPMCPSGSGGAGASAALALLDDVPRHRLRRATLHLPPRRSERGP
Ga0187878_10045052	3300018005	Peatland	MSVHIVDDEQRSGRRASPMRPLGSGGAGASAALALLDDVLRHRLRRAALHLPPWRSERGP
Ga0187878_10048023	3300018005	Peatland	MSMHIVDDEQRSDRRATPMRPPGSGAAGASAALALLDDVPRHRLRRAALHLPPRRSERGP
Ga0187878_10075806	3300018005	Peatland	MSVHIVDDEQRSDHRATPMRPSGSGGAGASAALALLDDVPRHRLRRAALHLPPRR
Ga0187878_10091087	3300018005	Peatland	MSVHIVDDEQRSDRRATPMRPSGSGGAGASAALALLDDVPRHRLRRAALHLPPRRSERGP
Ga0187878_10092053	3300018005	Peatland	MSVHIVDDEQRRDRLATPMRPSGSGGAGASAALALLDDVPRHRLRRAALDLPPRSSERGH
Ga0187878_10099421	3300018005	Peatland	ACEASSRREEEAMSVYIVDDEQRRDRLATPMRPSGSGGAGASAALALLDDVPRHCLRRAALHLPPRRSERGPS
Ga0187878_10129783	3300018005	Peatland	MSAHIVDDEQRRDRPAIPMRPSGSGGAGASAALALLDDVSRHRLRRAALHLPLRRSERGP
Ga0187878_10179344	3300018005	Peatland	MSAHIVDDEQRGDHPATPMRPSGSGGAGAIGTRALLDDVPRHRLRRAALHLPPRHSERGP
Ga0187878_10212131	3300018005	Peatland	MSVHIVDDEQRRDRPATPMRPSGSGGAGASAALALLDDVPRHRLRRAALHLPPRR
Ga0187878_10322104	3300018005	Peatland	MSGHIVDDEQRGDRPAIPLRPSGSGGAGASAALALLDDVRRHRLRRAALHLPPRRSERGP
Ga0187873_11054821	3300018013	Peatland	MSMHIVDDEQRSDRRATPMRPSGSGLEGASASLALLDDVHRHRLRRAALHLPLPSQERGPFQ
Ga0187866_13148782	3300018015	Peatland	MSVYIVDDEQRRDRLATPMRPSDSGGAGASAALALLDDVPRHRLRRAAL
Ga0187886_10850721	3300018018	Peatland	RREEKAMSVYIVDDEQRRDRLATPMRPSGSGGAGASAALALLDDVPRHRLRRAALNLPPRRSERGPS
Ga0187886_12299751	3300018018	Peatland	MLVHIVDDEQRRDRPQSPCALRVPGGAGASAALALLDDVHRHRLRRAALHLLPRRPERGP
Ga0187886_12313162	3300018018	Peatland	MSVHIVDDEQRSDHRATPMRPSGSGGAGASAALALLDDVPRHRLRRAASHLPP
Ga0187874_100081918	3300018019	Peatland	MYIVDDEQRSDRRPTPMRPLGSGLEGASASLALLDDVHRHRLRRAAL
Ga0187882_10112397	3300018021	Peatland	MSMYIVDDEQRSDRRATPMRPLGSGLEGASASLALLDDVHRHRL
Ga0187885_100029471	3300018025	Peatland	MSVHIVDDEQRSDRRATPMRPLGSGLEGASASLALLDDVHRHRLRRAALHLPLPSQ
Ga0187869_100306303	3300018030	Peatland	MSMHIVDDEQRRDRRATPMRPLGSGLEGASASLALLDDVHRHRLRRAALHLPLPSQER
Ga0187869_102783181	3300018030	Peatland	MSVHIVDDEQRSDRRATPMRPLGSGLEGASASLALLDDVHRHRLRRAA
Ga0187862_100569412	3300018040	Peatland	MSMHIVDDEQRSDRRPTPMRPLGSGLEGASASLALLDDVHRHRLRRAALHLPLPSQERGPFQF
Ga0187862_103560802	3300018040	Peatland	MSMHIVDDEKRSDRRATPMRPSGSGLEGASASLALLDDVHRHRLRRAALHLPLPSQERGP
Ga0187862_104348022	3300018040	Peatland	MSMHIVDDEQRSDRRPTPMRPSGSGLEGASASLALLDDVQRHRLRRAALHLPLPSQ
Ga0187858_1000670311	3300018057	Peatland	MSMHIVDDEQRSDRRATPMRPLGSGLEGASASLALLDDVHRHRLRRAALHLPLPSQ
Ga0187858_100248461	3300018057	Peatland	MSMHIVDDEQRSDRHATPMRPPGSGLEGASASLALLDDVHRHRLRRAALHLPLPSQERGPFQ
Ga0187858_105339121	3300018057	Peatland	MHIVDDEQHSDRRATPMRPLGSGLEGASASLALLDDVHRHRLR
Ga0187858_106587242	3300018057	Peatland	MHIVDDEQRSDRRATPMRPLGSSLEGASASLALLDDVHRHRLRR
Ga0187792_12378912	3300019265	Peatland	MHIVDDEQRSDRRAIPMRPSGSGGAGASASLALLDDVHRHRLRRAASHLPP
Ga0236339_12629851	3300022650	Freshwater	MSMHIVDDEQRGDRRATPMRPSGSGLAGTSAALALLDDVHRHRLRRAALHLPPPGQERGS
Ga0208456_10384941	3300025441	Peatland	MSMHIVDDEQRRDRRATPMRPLGSGLEGASASLALLDDVHRHRLRRAALHLP
Ga0208038_10239564	3300025446	Peatland	MHIVDDEQRRDRRATPMRPPGSGLEGASASLALLDDVPRHRLRRAALHLPLPSQERGPFQFSV
Ga0208037_10573132	3300025448	Peatland	MSMHIVDDEQRSDRRATPMRPLGSGLEGASASLALLDDVHRHRLRRSALHLPL
Ga0208687_10033251	3300025469	Peatland	MSVHIVDDEQRSDRRATPMRPLGSGLEGASASLALLDDVHRHRLRRAALHLPLPSQER
Ga0208687_10152943	3300025469	Peatland	MSMHIVDDEQRSDRRPTPMRPSGSGLEGTSASLALLDDVHRHRLRRAALHLPLPSQERGP
Ga0208692_10084631	3300025472	Peatland	MSMHIVDDEQRSDRRATPMRPLGSGWEGASASLALLDDVHRHRLRRAALHLPLPSQE
Ga0208692_10329611	3300025472	Peatland	MSVHIVDDEQRSDRRATPMRPLGSGLEGASASLALLDDVHRHRLRRAALHLPL
Ga0208692_10510811	3300025472	Peatland	MSMHIVDDEQRSDRRATPMRPLGSGLEGASASLALLDDVHRHRLRRAALHLPL
Ga0208716_11086941	3300025548	Arctic Peat Soil	MSVHIVDDEQRSDRRATPMRPSGSGAAGASAALALLDDVPRHRLRRAALHLPARRSRQSVNVIH
Ga0256815_10414411	3300026463	Sediment	GACAASARREEEEAMSVHIVDNEQRSNRRATPMRPSGSGAGASAALALLDDVHRHRLRRAALHLPTRRQERDIS
Ga0256868_102356621	3300027811	Soil	MHIVDDEQRSDRGATPMLPSGSGGAGASAALALLDDVHRHRLRRAAARSV
Ga0208980_106642311	3300027887	Wetland	EEEAMSRHIVDDEQRRYCLATPMRPSGSGGAGASAALALLDDVHRHRLRRAALHLPLRRSERDAS
Ga0209777_103657281	3300027896	Freshwater Lake Sediment	MSVHIIDDEQRSDRRATPVRPSGSGGAGASAALALLDDVHRHHLRRAALHLLPRRSERGP
Ga0311360_110987122	3300030339	Bog	MSLHIVDDEQRGDRPATPVRPSGSGGAGASAALALLDDVQRHRLRRAALHLPPRRSERGP
Ga0299915_1000576411	3300030613	Soil	MSAHIVDDEQRSDRRAIPVRPSGSGGAGASAALALLDDVHRHRLRRAALHLPRRRS
Ga0302322_1006767702	3300031902	Fen	MPLRIVDDEQRSDRRATPMRPLGSGGAGASAALALLDDVHRHRLRRAALHLPPRRSERGP
Ga0315278_102339421	3300031997	Sediment	MSVHIVDDEQRRDRPQSPCALRVPGTIAPAALLAGAPAALVLLDDAHRHRLRRAALHLPPPG
Ga0315278_118779782	3300031997	Sediment	MSVHVDDEQRRDRPQCPCALRVPGTVAPAALLAGASAALALLDDVHRHRLRRAALHL
Ga0315284_1000290327	3300032053	Sediment	MSVHIVDDEQRGDRPAIPMRPSGSGGAGASAALALLDDVQRHRLRRAALHQRPRRSERGP
Ga0315284_100246296	3300032053	Sediment	MSVHIVDDEQRRDRPASPMRPSASGGAGASAALALFDDVPRHRLRRAAMHLPPRRSERGP
Ga0315284_100579785	3300032053	Sediment	MSVPIVDDGQRSDRCTTPMRLGFRRCGGAFAALALLDDVHQHRLRRAALHLPPRRSERGP
Ga0315281_117018901	3300032163	Sediment	MSVHIADDEQRSDRRATPMRPSGSGGAGASAALALLDDVQRHRLRRAALHLPPRRSERGP
Ga0315276_108314451	3300032177	Sediment	MSVHIVDDEQCRDRPQSPCALRVPGGAGASAALALLDDDYRHRLRRDALHLPPLGAPQARRCPERGPS
Ga0315286_111826051	3300032342	Sediment	MSVYIVDDEQRRDRPASPMRPSGSGGAGAPAALALLDDAHRHRLRRAALHLPPPGPPQA
Ga0315275_104735312	3300032401	Sediment	VHIVDDEQRRDRPQSPCALRVPGGAGASAALALLDDVQRHRLRRAAWHLPPPRPERGPS
Ga0315275_105601511	3300032401	Sediment	MPVHMVDDERRRDRPQSPCALRIPGAAGACAALALRDDDQRHRRRRAALHLPP
Ga0315273_1000361121	3300032516	Sediment	MSVHIVDDEQRRDRPQSPCALRVPGGAGASAALALLDDVQRHRLRRAAWHLPPPRP
Ga0316603_120424581	3300033413	Soil	MSVHIVDDEQRSDRPATPMRPLGSGLAGASAALALLDDVHRHRLRRAALHLPPPSQERGP
Ga0316601_1003096921	3300033419	Soil	RARREEGAMSLHIVDDERRGDRRVTPMRPLDSGLAGTSAALALLDDVHRHRLRRAALHLPLPG
Ga0316601_1017155842	3300033419	Soil	MSLHIVDDEQRGDRRVTPMRPLGSGLAGTSAALALLDDVHRHRLRRAALHLPLP
Ga0326726_114434152	3300033433	Peat Soil	QRGDRPATPVRPSGSGGAGAIGTRALLDDVPRHRLRRAALHLPPRRSERDAS
Ga0316613_101376483	3300033434	Soil	MSMHIVDDEQRCDRRVPPMRPLGSGLTGTSAALALLDDVHRHRLRHAAV
Ga0316613_103441231	3300033434	Soil	MSLHIVDDEQRGDRRVTPMRPLGSCLAGTSAALALLEDVQRHRLRRAALHLPL
Ga0316613_103477812	3300033434	Soil	MSLHIVDDERRGDRRVTPMRPLDSGLAGTSAALALLDDVHRHRLRRAA
Ga0316620_109326691	3300033480	Soil	MSRHIVDDEQRRDRPAIPMRPPGSGLAETSAALALLDDVHRHRLRRAALHLPPPGQER
Ga0316600_108758181	3300033481	Soil	MSLHIVDDEQRGDRRVTPMRPLGSGLAGTSAALALLDDVHRHRLRRAALHLPLPGQERGPSYYSD
Ga0316624_111688042	3300033486	Soil	MHIVDDEQRSDRRATPMRPSGSGRAGASAALALLDDVHRHRLRRAALHLPPPGQERGPFYDSD
Ga0316630_100759321	3300033487	Soil	MSRHIVDDEQRRYCLVIPMRPLGSGAAGASAALSLLDDVPRHRLRRAALHLPLRRSERDA
Ga0316630_103990331	3300033487	Soil	MSVHIVDDEQRSDRPATPTRPLGSGLAGASAALALLDDVHRHRLRRAALHLPPPSQERGP
Ga0316630_118938892	3300033487	Soil	MYIIVDEQRRDRPQHPCAPSGSGGTGASAALALLDDDHQHRLRRAAWHLPPR
Ga0316630_119870461	3300033487	Soil	MSLRIVDDEQRRDRPQHPCALRVPAARGHLRALALLDDAHQHRLRRAAWHLPL
Ga0316628_1007535432	3300033513	Soil	MSVHIVDDEQRRDRPQSPCGWAAPRTQIPSGSGRAGASAALALLDDVPRHRLRRAALHLPPRGRNAAPPNSRTGS
Ga0316628_1025653582	3300033513	Soil	MSVHIVDDEQRKRSRATPTRPSGSRGAGASAALALLDDVHRHRLRRA
Ga0316617_1007993962	3300033557	Soil	MSLHIVDDEQRGDRRVTPMRPLGSGLAGTSAALALLDDVHRHRLRRAALHLPLPGQERGPFY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053368

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences