Metagenome / Metatranscriptome Family F053379

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053379
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	59 residues
Representative Sequence	MPVERRGQAIRVMINLVNWQQEEPTGCDGERQLSMDGTSRVSREAQARICERLGVQ
Number of Associated Samples	117
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.27 %
% of genes near scaffold ends (potentially truncated)	84.40 %
% of genes from short scaffolds (< 2000 bps)	96.45 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.319 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (15.603 % of family members)
Environment Ontology (ENVO)	Unclassified (31.915 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.610 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.48% β-sheet: 0.00% Coil/Unstructured: 59.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF08388	GIIM	2.13
PF00078	RVT_1	2.13
PF00069	Pkinase	1.42
PF03572	Peptidase_S41	0.71
PF07690	MFS_1	0.71
PF02586	SRAP	0.71
PF05016	ParE_toxin	0.71
PF00872	Transposase_mut	0.71
PF01546	Peptidase_M20	0.71
PF06983	3-dmu-9_3-mt	0.71
PF12704	MacB_PCD	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	5.67
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.71
COG2764	Zn-dependent glyoxalase, PhnB family	Energy production and conversion [C]	0.71
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.71
COG3865	Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferase	General function prediction only [R]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.32 %
All Organisms	root	All Organisms	44.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.32 %
cellular organisms	root	All Organisms → cellular organisms	44.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.32 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.32 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.99 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	16.31 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.32 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	15.60 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8.51 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	6.38 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.71 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.60 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.51 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	6.38 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.71 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.60 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8.51 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	6.38 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.60 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8.51 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	6.38 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.60 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	8.51 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	6.38 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.32 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.60 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	8.51 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	6.38 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.71 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002162\|JGI24139J26690_1057269	All Organisms → cellular organisms → Bacteria → Proteobacteria	711	Open in IMG/M
3300004971\|Ga0072324_1265338	Not Available	719	Open in IMG/M
3300005294\|Ga0065705_10407328	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	874	Open in IMG/M
3300005332\|Ga0066388_101881291	Not Available	1067	Open in IMG/M
3300005332\|Ga0066388_102335128	All Organisms → cellular organisms → Bacteria → Proteobacteria	969	Open in IMG/M
3300005332\|Ga0066388_105200242	Not Available	660	Open in IMG/M
3300005332\|Ga0066388_106563554	Not Available	586	Open in IMG/M
3300005332\|Ga0066388_107267651	Not Available	556	Open in IMG/M
3300005332\|Ga0066388_108404405	Not Available	514	Open in IMG/M
3300005552\|Ga0066701_10951554	Not Available	508	Open in IMG/M
3300005574\|Ga0066694_10411560	Not Available	635	Open in IMG/M
3300005713\|Ga0066905_100229337	All Organisms → cellular organisms → Bacteria → Proteobacteria	1411	Open in IMG/M
3300005713\|Ga0066905_101639777	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	589	Open in IMG/M
3300005713\|Ga0066905_101955695	Not Available	543	Open in IMG/M
3300005764\|Ga0066903_104224520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300005764\|Ga0066903_105642188	Not Available	658	Open in IMG/M
3300005764\|Ga0066903_105706927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	654	Open in IMG/M
3300005764\|Ga0066903_107511255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300006086\|Ga0075019_10367422	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300006194\|Ga0075427_10116413	Not Available	507	Open in IMG/M
3300006844\|Ga0075428_101737114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300006854\|Ga0075425_100708808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1156	Open in IMG/M
3300006871\|Ga0075434_100339274	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300006893\|Ga0073928_10945148	Not Available	589	Open in IMG/M
3300006904\|Ga0075424_100643015	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1133	Open in IMG/M
3300007521\|Ga0105044_11356724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	518	Open in IMG/M
3300009090\|Ga0099827_11453676	Not Available	597	Open in IMG/M
3300009094\|Ga0111539_11789014	All Organisms → cellular organisms → Bacteria → Proteobacteria	712	Open in IMG/M
3300009100\|Ga0075418_10996760	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	907	Open in IMG/M
3300009147\|Ga0114129_11886107	Not Available	725	Open in IMG/M
3300009147\|Ga0114129_12291140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300009156\|Ga0111538_10364442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1829	Open in IMG/M
3300009156\|Ga0111538_13372975	Not Available	555	Open in IMG/M
3300009162\|Ga0075423_10992448	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	892	Open in IMG/M
3300009792\|Ga0126374_10358723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1003	Open in IMG/M
3300009792\|Ga0126374_11046065	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	644	Open in IMG/M
3300010043\|Ga0126380_11269609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	639	Open in IMG/M
3300010047\|Ga0126382_12356687	Not Available	516	Open in IMG/M
3300010048\|Ga0126373_11912251	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300010106\|Ga0127472_1113023	Not Available	535	Open in IMG/M
3300010359\|Ga0126376_11940465	Not Available	629	Open in IMG/M
3300010360\|Ga0126372_10789121	Not Available	939	Open in IMG/M
3300010361\|Ga0126378_10504773	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	1325	Open in IMG/M
3300010362\|Ga0126377_11482575	Not Available	752	Open in IMG/M
3300010362\|Ga0126377_12098481	Not Available	641	Open in IMG/M
3300010366\|Ga0126379_10188051	All Organisms → cellular organisms → Bacteria	1972	Open in IMG/M
3300010376\|Ga0126381_100030707	All Organisms → cellular organisms → Bacteria	6405	Open in IMG/M
3300010376\|Ga0126381_100777234	Not Available	1374	Open in IMG/M
3300010376\|Ga0126381_101396159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1012	Open in IMG/M
3300010376\|Ga0126381_103628512	Not Available	605	Open in IMG/M
3300010379\|Ga0136449_102741931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	698	Open in IMG/M
3300010398\|Ga0126383_10098259	All Organisms → cellular organisms → Bacteria	2608	Open in IMG/M
3300010398\|Ga0126383_13412309	Not Available	519	Open in IMG/M
3300010398\|Ga0126383_13505567	Not Available	512	Open in IMG/M
3300010860\|Ga0126351_1207048	Not Available	607	Open in IMG/M
3300010863\|Ga0124850_1043955	Not Available	1413	Open in IMG/M
3300010865\|Ga0126346_1003917	Not Available	615	Open in IMG/M
3300010866\|Ga0126344_1259423	Not Available	625	Open in IMG/M
3300011120\|Ga0150983_15152513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	725	Open in IMG/M
3300012189\|Ga0137388_11038509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300012203\|Ga0137399_11513369	Not Available	558	Open in IMG/M
3300012212\|Ga0150985_111479305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300012390\|Ga0134054_1100662	Not Available	601	Open in IMG/M
3300012517\|Ga0157354_1014585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	841	Open in IMG/M
3300012948\|Ga0126375_11021022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300012948\|Ga0126375_11109430	Not Available	652	Open in IMG/M
3300012971\|Ga0126369_12710268	Not Available	579	Open in IMG/M
3300014165\|Ga0181523_10453011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	711	Open in IMG/M
3300014491\|Ga0182014_10315692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	798	Open in IMG/M
3300014496\|Ga0182011_10510157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	773	Open in IMG/M
3300015358\|Ga0134089_10009830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3057	Open in IMG/M
3300015371\|Ga0132258_10244785	All Organisms → cellular organisms → Bacteria	4379	Open in IMG/M
3300015372\|Ga0132256_101969476	Not Available	691	Open in IMG/M
3300015374\|Ga0132255_103164329	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	702	Open in IMG/M
3300016270\|Ga0182036_10107862	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1907	Open in IMG/M
3300016341\|Ga0182035_11162600	Not Available	688	Open in IMG/M
3300016341\|Ga0182035_11202739	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	677	Open in IMG/M
3300016357\|Ga0182032_10550416	Not Available	955	Open in IMG/M
3300016404\|Ga0182037_11011666	Not Available	725	Open in IMG/M
3300016700\|Ga0181513_1200220	Not Available	647	Open in IMG/M
3300016750\|Ga0181505_10294238	Not Available	601	Open in IMG/M
3300017939\|Ga0187775_10119798	Not Available	906	Open in IMG/M
3300017966\|Ga0187776_11341306	Not Available	542	Open in IMG/M
3300018030\|Ga0187869_10579418	Not Available	532	Open in IMG/M
3300018038\|Ga0187855_10883255	Not Available	522	Open in IMG/M
3300018052\|Ga0184638_1329088	Not Available	514	Open in IMG/M
3300018468\|Ga0066662_13001914	Not Available	501	Open in IMG/M
3300019183\|Ga0184601_116470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300019233\|Ga0184645_1172570	Not Available	644	Open in IMG/M
3300019254\|Ga0184641_1290366	Not Available	579	Open in IMG/M
3300019265\|Ga0187792_1343028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	643	Open in IMG/M
3300019377\|Ga0190264_12095660	Not Available	522	Open in IMG/M
3300019487\|Ga0187893_10548486	Not Available	743	Open in IMG/M
3300020018\|Ga0193721_1009074	Not Available	2607	Open in IMG/M
3300021073\|Ga0210378_10251113	Not Available	669	Open in IMG/M
3300021407\|Ga0210383_11391130	Not Available	584	Open in IMG/M
3300021413\|Ga0193750_1060653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	765	Open in IMG/M
3300021432\|Ga0210384_10326706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1381	Open in IMG/M
3300021560\|Ga0126371_12723303	Not Available	599	Open in IMG/M
3300022222\|Ga0226658_10069636	Not Available	1637	Open in IMG/M
3300022513\|Ga0242667_1029924	Not Available	616	Open in IMG/M
3300022531\|Ga0242660_1086876	All Organisms → cellular organisms → Bacteria → Proteobacteria	746	Open in IMG/M
3300022718\|Ga0242675_1060828	All Organisms → cellular organisms → Bacteria → Proteobacteria	655	Open in IMG/M
3300022721\|Ga0242666_1117818	All Organisms → cellular organisms → Bacteria → Proteobacteria	627	Open in IMG/M
3300022722\|Ga0242657_1174887	All Organisms → cellular organisms → Bacteria → Proteobacteria	580	Open in IMG/M
3300025581\|Ga0208355_1106800	Not Available	586	Open in IMG/M
3300025888\|Ga0209540_10251929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1024	Open in IMG/M
3300027273\|Ga0209886_1013382	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1197	Open in IMG/M
3300027533\|Ga0208185_1109561	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M
3300027654\|Ga0209799_1027537	Not Available	1256	Open in IMG/M
3300027907\|Ga0207428_11069230	Not Available	565	Open in IMG/M
3300027950\|Ga0209885_1029650	Not Available	610	Open in IMG/M
3300031234\|Ga0302325_12648246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	593	Open in IMG/M
3300031446\|Ga0170820_16874191	Not Available	516	Open in IMG/M
3300031469\|Ga0170819_14153844	Not Available	573	Open in IMG/M
3300031474\|Ga0170818_108078625	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1148	Open in IMG/M
3300031543\|Ga0318516_10310207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	912	Open in IMG/M
3300031572\|Ga0318515_10283271	Not Available	889	Open in IMG/M
3300031576\|Ga0247727_10704772	Not Available	738	Open in IMG/M
3300031679\|Ga0318561_10562832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300031708\|Ga0310686_109104803	Not Available	514	Open in IMG/M
3300031719\|Ga0306917_11183195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300031781\|Ga0318547_11083396	Not Available	502	Open in IMG/M
3300031820\|Ga0307473_10176652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1244	Open in IMG/M
3300031945\|Ga0310913_10392547	Not Available	984	Open in IMG/M
3300031946\|Ga0310910_10986745	Not Available	659	Open in IMG/M
3300031952\|Ga0315294_11293523	Not Available	584	Open in IMG/M
3300031954\|Ga0306926_10755327	Not Available	1175	Open in IMG/M
3300031954\|Ga0306926_11585842	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300031954\|Ga0306926_11835052	Not Available	687	Open in IMG/M
3300032035\|Ga0310911_10648117	Not Available	612	Open in IMG/M
3300032051\|Ga0318532_10225076	Not Available	666	Open in IMG/M
3300032059\|Ga0318533_10994129	Not Available	615	Open in IMG/M
3300032059\|Ga0318533_11350018	Not Available	521	Open in IMG/M
3300032063\|Ga0318504_10390188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300032076\|Ga0306924_11442543	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300032180\|Ga0307471_102184474	Not Available	697	Open in IMG/M
3300032261\|Ga0306920_102337793	Not Available	739	Open in IMG/M
3300033158\|Ga0335077_10900429	All Organisms → cellular organisms → Bacteria → Proteobacteria	891	Open in IMG/M
3300033289\|Ga0310914_10933663	Not Available	767	Open in IMG/M
3300033433\|Ga0326726_11437298	Not Available	671	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.94%
Host-Associated	Host-Associated	12.06%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.31%
Plants	Host-Associated → Plants	12.06%
Aquatic	Environmental → Aquatic	10.64%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.93%
Freshwater	Environmental → Aquatic → Freshwater	7.80%
Sediment	Environmental → Aquatic → Sediment	2.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.13%
Peat	Environmental → Terrestrial → Peat	1.42%
Cave	Environmental → Terrestrial → Cave	1.42%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.45%
Loam	Environmental → Terrestrial → Soil → Loam	11.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.22%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.26%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.55%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.13%
Lake	Environmental → Aquatic → Freshwater → Lake	1.42%
Sand	Environmental → Terrestrial → Soil → Sand	1.42%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.42%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.42%
Ice	Environmental → Aquatic → Freshwater → Ice	0.71%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.37%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.22%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.55%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.84%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.13%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.13%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.13%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.13%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.13%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.42%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.42%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.42%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.42%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.71%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.71%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	0.71%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.64%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.55%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.84%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.13%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.13%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.13%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.13%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.42%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.42%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.42%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.71%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.71%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	0.71%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.71%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.71%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.71%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.71%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.71%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.71%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.71%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.71%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.71%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.71%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.71%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002162	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-21A	Environmental	Open in IMG/M
3300004971	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 41 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007521	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-01	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010106	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300010865	Boreal forest soil eukaryotic communities from Alaska, USA - C3-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012390	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016700	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019183	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZA1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019265	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022222	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1 (v2)	Environmental	Open in IMG/M
3300022513	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022531	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300027273	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027950	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_40_50 (SPAdes)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031952	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_40	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24139J26690_10572691	3300002162	Arctic Peat Soil	MPVERRGQAIRVMVNLANWQQEEPTGCGGGRQLSMDGTSRVTGDSHARFCERLGGKFP
Ga0072324_12653381	3300004971	Peatlands Soil	MPVERRGQVICVMVNLANWQQEEPTGYGGGRRLSMDDTSRVNREVYARFCERLGG
Ga0065705_104073282	3300005294	Switchgrass Rhizosphere	MPVERRGQAIRVMINLVNWQQDEPTGCGGGRQLSMNGKSRVSREAQARFREGLGV
Ga0066388_1018812912	3300005332	Tropical Forest Soil	MPVERRGQAIRVMINLVNWQQEEPTGCDGERQLSMDGTSRVSREAQARICERLGVQ
Ga0066388_1023351281	3300005332	Tropical Forest Soil	MPVEPRGQAIRVMINLVNRKREEPPGCGGGRQLSLDGTSRVTGDCHARICERLGVKSPGRLGGDQR*
Ga0066388_1052002422	3300005332	Tropical Forest Soil	MSVERRGQVIRVPIMLVNWQQEEPTNRGEGRQPLMDGTSRVSREAQARFCEGLGV*
Ga0066388_1065635541	3300005332	Tropical Forest Soil	VERRGQVIRVSIMLVNWQQEEPTDCGEGRQLFMDDTSRVSREAQARFCE
Ga0066388_1072676511	3300005332	Tropical Forest Soil	MSVERRGQVIRVTTQLVNWQQEEPTDRGEGRQLLMNDKSRVSREAQARFREGLGVKLPGATRP
Ga0066388_1084044051	3300005332	Tropical Forest Soil	MSVERRGQVIRALITSVNWQQEEPTDCGEGRQLFMDDTSRVSREAQARFREGLGVQFPGATRPPNWLR*
Ga0066701_109515541	3300005552	Soil	MPAERRGRAIRVMVNLVNWQQEEPTGCGGGRQPSMDGTSRVTGDRHARF
Ga0066694_104115601	3300005574	Soil	MPVERREQAIRVMVMLVNWQQEEPNGCGGGRQLLLNGTSRVTGDGHARICEGLGVKVPGA
Ga0066905_1002293371	3300005713	Tropical Forest Soil	MSVERRGQVIRALITLVNWQQEEPIDRGEGRQLFMDDTSRVSREAQARFSEGLGVKLPGATRPATEIHP*
Ga0066905_1016397771	3300005713	Tropical Forest Soil	MSVERRGQVIRVMINLVNWQQEEPTDCGEGRQLFMDDTSRVSREAQARFCER
Ga0066905_1019556951	3300005713	Tropical Forest Soil	MSVERRGQVIRVSIMLVNWQREEPTDCGEGRQLFMDDTSRVSREAQARFCER
Ga0066903_1042245202	3300005764	Tropical Forest Soil	MERRGQVIRVPIMLVNWQQEEPTDCGEGRQLFMDDTSRVSREAQARICERLGVRLPGATRPGTEIRFQFLPHRKCQMSE*
Ga0066903_1056421881	3300005764	Tropical Forest Soil	MSVERRGQVIRVPITLVNRQREEPTDRGEERQLFMDGTSRVSREAQARFCEGLGVQFPGA
Ga0066903_1057069272	3300005764	Tropical Forest Soil	MSVERRGQVIRVPIMLVNWQQEEPTNRGEGRQPLMDGTSRVSREAQARFCEGLGVQLPGATRPST*
Ga0066903_1075112552	3300005764	Tropical Forest Soil	MSVERRGQVIRVPIMLVNWQQEEPTDCGEGRQLFMDGTSRVSRETQARFCEGLGVQLPGATRPSIESRNTKTDR*
Ga0075019_103674221	3300006086	Watersheds	VERRGQAIRVMVNLANWQQEEPIGRDGGRQLSMDGTSRVTGDSHARFC
Ga0075427_101164133	3300006194	Populus Rhizosphere	MPVEQRGQAIRVMINLVNWQQDEPTGCGGGRQLSMNGTSRVSREAQARICERLGV
Ga0075428_1017371141	3300006844	Populus Rhizosphere	MERRGRVIRVILTLVNRQREEPTGCDGERQLSMNGTSRVSREAQARICERLGVRFPGATR
Ga0075425_1007088083	3300006854	Populus Rhizosphere	MSVERRGQVIRVPITLVNWQQEEPTDRGEGRQLFMDDTSRVSREAQARFREGLGVQLPGATRP
Ga0075434_1003392741	3300006871	Populus Rhizosphere	MPVEQRGQAIRVMINLVNWQQDEPTGCGGGRQLSMNGTSRVSREAQARICERLGVRFPGATR
Ga0073928_109451481	3300006893	Iron-Sulfur Acid Spring	MKRVTTAERRGQAIRVVIDLVNRRREEPTDHDRGRQLSLDGTSRVTGDSHARFCESC
Ga0075424_1006430154	3300006904	Populus Rhizosphere	MPVEQRGQAIRVMINLVNWQQDEPTGCGGGRQLSMNGTSRVSREAQARICERLGVRFPGATRPSIGVYGATVQ*
Ga0105044_113567241	3300007521	Freshwater	VERRGRVIRVTVDLVNWQQEEPTDCGRGRQLSMNGTSRVTGDSQARFCERLGVKLPGPTR
Ga0099827_114536762	3300009090	Vadose Zone Soil	MPVERRGQAIRVMVNLANWQQEEPTGCGGGRQLSMDGTSRVTGDSHARFCERLGV
Ga0111539_117890141	3300009094	Populus Rhizosphere	MPVEQRGQAIRVMIHLVNWQQEEPTGCGGGRQLSMDGTSRVMGDYHARFCERLGVK
Ga0075418_109967601	3300009100	Populus Rhizosphere	MPVEQRGQAIRVMINLVNWQQDEPTGCGGGRQLSMNGTSRVSREAQARICERLGVRFPGATRPRGETPR
Ga0114129_118861071	3300009147	Populus Rhizosphere	VERRGQAIRVVIDLVNWQQEEPTGYGGGRQPSMSGTSRISREAYVRSCERLGVKFP
Ga0114129_122911401	3300009147	Populus Rhizosphere	MERRGRVIRVILTLVNRQREEPTGCDGERQLSMNGTSRVSREAQARICERLGVRFPGAT
Ga0111538_103644423	3300009156	Populus Rhizosphere	MPVEQRGQAIRVMINLVNWQQDEPTGCGGGRQLSMNGTSRVSREAQARICERLGVRFPGATRPSKWEQS
Ga0111538_133729751	3300009156	Populus Rhizosphere	MPVEQRGQAIRVMIHLVNWQQEEPTGCGGGRQLSMDGTSRVMGDYHARFCERLGVKFPGATRRYLGPVAVA*
Ga0075423_109924481	3300009162	Populus Rhizosphere	MPVEQRGQAIRVMINLVNWQQDEPTGCGGGRQLSMNGTSRVSREAQARICERLGVRFPGATRPS
Ga0126374_103587231	3300009792	Tropical Forest Soil	MERRGRVIRVIPTLVNRQREEPTGCDGERQLSMDGTSRVSREAQARICERLGVRFPGATR
Ga0126374_110460652	3300009792	Tropical Forest Soil	VERRGQVIRVPITLVNWQQEESTDRGEGRQLFMDDTSRVSREAQARFREGLGVQFPGATRPS
Ga0126380_112696092	3300010043	Tropical Forest Soil	VERRGQVIRVMINLVNWQQEEPTDCGEGRQLFMDDTSRVSREAQARFCEGLGVQLPGATR
Ga0126382_123566871	3300010047	Tropical Forest Soil	MERRGRVIRVIPTLVNRQREEPTGCDGGRQLSMNGTSRVSREAQARICERLGVR
Ga0126373_119122512	3300010048	Tropical Forest Soil	GQVIRALITLVNWQQEEPTDCGEGRQLFMDDTSRVSREAQARFREGLGVQFPGATRPTTEIPSPRLLLFVCS*
Ga0127472_11130232	3300010106	Grasslands Soil	MSVERRGQAIRVMVNLANWQQEELTGCGGARQLSMDGTSRVTGDSHARFCERLGVKF
Ga0126376_119404652	3300010359	Tropical Forest Soil	MSVERRGQVIRVPITLVNWQQEEPTDRGEGRQLFMDDTSRVSREAQARFREGLGVQFPGATRPATEPNAYPD*
Ga0126372_107891211	3300010360	Tropical Forest Soil	MSVERRGQVIRVMINLVNWQQEEPTDCGEGRQLFMDDTSRVSREAQARFCEGLGVQLPGATRPSTEKDPTDN*
Ga0126378_105047732	3300010361	Tropical Forest Soil	VEPRGQAIRVMINLVNRKREEPPGCGGGRQLSLDGTSRVTGDCHARICERLGVKSPGATR
Ga0126377_114825751	3300010362	Tropical Forest Soil	MSVERRGQVIRVPITLVNWQQEESTDRGEGRQLFMDDTSRVSREAQARFCEGLG
Ga0126377_120984811	3300010362	Tropical Forest Soil	VERRGQAIRVMINLVNWQQEEPTDCGGERQLSVDGTSRVSREAQARICERLGVRFPGATRPPT
Ga0126379_101880512	3300010366	Tropical Forest Soil	MSAERRGQVIRVPTMLVNWQQEEPTDRGEGRQLFMNDKSRVSREAQARFCEGLGVKLPGATRPSKWVR*
Ga0126381_1000307072	3300010376	Tropical Forest Soil	MERRGQAIRVMINLVNWQQEEPIGCGGERQLSVNGTSRVSREAQARFREGLVVKLPGATRPSI*
Ga0126381_1007772342	3300010376	Tropical Forest Soil	VEPRGQAIRVMINLVNRKREEPPGCGGGRQLSLDGTSRVTGDCHARICERLGVK
Ga0126381_1013961592	3300010376	Tropical Forest Soil	MERRGRVIRVIPTLVNRQREEPTGCDGGRQLSMNGTSRVSREAQARICERLGVRLPGA
Ga0126381_1036285121	3300010376	Tropical Forest Soil	VEPRGQAIRVMINLVNRKREEPAGCGGGRQPSRNGTSRVTGDCHARICERLGVKIPGATR
Ga0136449_1027419311	3300010379	Peatlands Soil	VERRGQAIRVMITLVNWQQEEPNGCGGGRQLSMDGTSRVTGDCHARFCERLGVKLPGATR
Ga0126383_100982593	3300010398	Tropical Forest Soil	MFVERRGQAIRVQINLVNRQREEPTGRGGERQLSMDGTSRVTGGCHARFCERLGVKYPGATRRR*
Ga0126383_134123091	3300010398	Tropical Forest Soil	MERRGQVIRVPIMLVNWQQEEPTDCGEGRQLFMDDTSRVSREAQARICERLGVRLPGA
Ga0126383_135055671	3300010398	Tropical Forest Soil	MSVERRGQVIRVPITLVNRQREEPTDRGEERQLFMDGTSRVSREAQARFCEGLGVQ
Ga0126351_12070481	3300010860	Boreal Forest Soil	MPVERRGQAICVMINLANWKQEEPNDYGGGRQLSMDGTSRVTGDCHARICE
Ga0124850_10439553	3300010863	Tropical Forest Soil	VERRGQVIRVPITLVNWQQEESTDRGEGRQLFMDDTSRVSREAQARICERLGVRFPGATRPSTNVLLFYN
Ga0126346_10039171	3300010865	Boreal Forest Soil	MPVERRGQAICVMINLANWKQEEPNGYGGGRQPSMDGTSRVTGDCHARICERLG
Ga0126344_12594231	3300010866	Boreal Forest Soil	MPVERRGQAICVMINLANWKQEEPNDYGGGRQLSMDGTSRVTGDCHARICERLGA
Ga0150983_151525131	3300011120	Forest Soil	VERRGQVIRVPITLVNWQQEEPTDRGEGRQLFMGDKSRVSREAQARFCEGL
Ga0137388_110385092	3300012189	Vadose Zone Soil	MPVERRGRAIRVTAGVVNWQQEEPSGRDGKRQLSRGGTSRVTGDSHARICERLGVK
Ga0137399_115133691	3300012203	Vadose Zone Soil	VERRGQAIRVMVNLANWQQEELTGCGGGRQPSMDGTSRVTGDCHARFCERLGVK
Ga0150985_1114793052	3300012212	Avena Fatua Rhizosphere	MPVEQRGQAIRVMINLVNRKREEPTGCGGGRQLSMDGTSRVTGDFHARFYDRLGVKLPGPTRRG
Ga0134054_11006621	3300012390	Grasslands Soil	MAVERRGQVIRVMINLGNWQQDDPTGCGGGRQLSMGGTSRVSREVHARFCESL
Ga0157354_10145851	3300012517	Unplanted Soil	MERRGRVIRVILTLVNRQREEPTGCDGERQLSMNGTSRVSREAQARICERLGVR
Ga0126375_110210222	3300012948	Tropical Forest Soil	VPITLVNLQQEEPPDRGEGRQLFMDRTSRVSREAQARICERLGVRFPGATRPSTGIRLLFS*
Ga0126375_111094301	3300012948	Tropical Forest Soil	MSVERRGQVIRALITLVNWQQEEPIDRGEGRQLFMDDTSRVSREAQARFSEGLGVKLPGATRPATNRH*
Ga0126369_127102681	3300012971	Tropical Forest Soil	VERRGQAIRVMINLVNWQQEEPTDCGGERQLSVDGTSRVSREAQARICERLGVRFPGATR
Ga0181523_104530111	3300014165	Bog	MIDLVNRKREEPTGCGGGRQPSLDGTSRVTGDGHARSCERLGVKFPGPTRR
Ga0182014_103156921	3300014491	Bog	MPVEQRGQAIRVTINLVNWQQEEPTGYGGGRQLSLDGTSRVNREVYARFCERLGVQFPGP
Ga0182011_105101571	3300014496	Fen	VERRGQAIRVMIALVNWQQEEPNGCGGGQQLLMNGTSRVNREIYARFCERLGVKFPGPTR
Ga0134089_100098306	3300015358	Grasslands Soil	MAVERRGQVIRVMINLGNWQQDDPTGCGGGRQLSMGGTSRVSREVHARFCESLGVQFPGATRHSHCRLRKT*
Ga0132258_102447855	3300015371	Arabidopsis Rhizosphere	VMSVERRGQVIRVPITLVNWQQEEPTDCGGERQLSVDGKSRVSREAQARFREGLGVRLPGATRPSSDQKSTVM*
Ga0132256_1019694761	3300015372	Arabidopsis Rhizosphere	VERRGQAIRVMINLVNWQQEEPTDCGGERQLSVDGKSRVSREAQARICERLGVRFPGATRPSIGVYGATVQ*
Ga0132255_1031643292	3300015374	Arabidopsis Rhizosphere	MPVEQRGQAIRVMINLVNWQQDEPTGCGGGRQLSMNGTSRVSREAQARI
Ga0182036_101078623	3300016270	Soil	MPTERRGQAIRVMPTLVNRQREEPTGCDGGRQLSMNGTSRVSREAQARICERLGVQLPG
Ga0182035_111626001	3300016341	Soil	VERRGQAIRVVINLVNWQQEEPNGYGGGRQLSMDGTSRVTGDSHARICERLGVK
Ga0182035_112027392	3300016341	Soil	MERRGQAIRVMINLVNWQQEEPIGCGGGRQLSMDGTSRVTGDSHARICERLGVK
Ga0182032_105504161	3300016357	Soil	MSVERRGQVIRALITLVNWQQEEPTDCGEGRQLFMDDTSRVSREAQARFREGLGVKLPIAPG
Ga0182037_110116661	3300016404	Soil	MERRGQAIRVMINLVNWQQEEPIGCGGGRQLSVNGTSRVSREAQARICERLGVRLPIAPG
Ga0181513_12002201	3300016700	Peatland	MPAEQRGQAIRVMIALVNWQQEEPNGCGGGQQLLLNGTSRVNREIYARFCERL
Ga0181505_102942381	3300016750	Peatland	MPAEQRGQAIRVMIALVNWQQEEPNGCGRGQQLSRNGTSRVNREIYARFCGAA
Ga0187775_101197981	3300017939	Tropical Peatland	MSAEQRGQAIRVMINLVNRKREEPTDCGGRRQPSMDGTSRVSREAHARICERLGVQAP
Ga0187776_113413062	3300017966	Tropical Peatland	MSVERRGQVIRVTTQLVNWQQEEPTERGEGRQLFMNDKSRVSREAQARFREGLGVKLPGA
Ga0187869_105794181	3300018030	Peatland	MSVERRGQAIRVMIELVNWQQEEPNGCGGGQQLSMNGTSRVNREIYARFCERLG
Ga0187855_108832551	3300018038	Peatland	MSVERRGQAIRVTINLVNWQQDEPTGYGGGRQLSMDGTGRVNREVYARFCE
Ga0184638_13290881	3300018052	Groundwater Sediment	MPVERRGRAIRVTVGVVNWQQEEPRGRDGKRQLSRDGTSRVTGDSHARICERLGVKF
Ga0066662_130019141	3300018468	Grasslands Soil	MPVERREQAIRVMVMLVNWQQEEPNGCGEGRQLLLNGTSRVTGDGHARICEGLGVKVPGATRLVSR
Ga0184601_1164701	3300019183	Soil	VERRGQAIRVMINLANWQQEEPTGCGGGRQLSMDDTSRVNREVYARFCERLGVKFPGPTR
Ga0184645_11725702	3300019233	Groundwater Sediment	MPVERRGRAIRVTVGVVNWQQEEPRGRDGKRQLSRDGTSRVTGDSHA
Ga0184641_12903661	3300019254	Groundwater Sediment	MPVERRGRAIRVTVGVVNWQQEEPRGRDGKRQLSRDGTSRVTGDSHARI
Ga0187792_13430281	3300019265	Peatland	MSAEQRGQAIRVTTAMVNWQQEEPNGCGGGRRPSVDGTSRVIGDNHARFCEGLGVKFPGP
Ga0190264_120956601	3300019377	Soil	MPVERRGRAIRVVIDLVNRRRDEPTAHDRGRQLPLDGTSRVTGDGQARFREGCALQAH
Ga0187893_105484861	3300019487	Microbial Mat On Rocks	VERRGQAIRVMVNLANWQQEEPTDCGGGRQLSMDGTSRVTGDSHARLCERL
Ga0193721_10090742	3300020018	Soil	MSVERRGQAIRVIVNLANWQQEEPTGCGGGRQLSMDGTSRVTGDSHARFCERLGV
Ga0210378_102511131	3300021073	Groundwater Sediment	MPVERRGRAIRVTVGVVNWQQEEPRGRDGKRQLSRDGTSRVTGDSHARICERLGVKFLGP
Ga0210383_113911301	3300021407	Soil	MSVEQRGQAIRAMINKANWQQEEPTGCGGGRQLSMDGTSRVTGDCQARFCERLGVK
Ga0193750_10606531	3300021413	Soil	MSVERRGQAIRVMVNLANWQQEEPTGCGGGRQLSMDGTSRVTGDSHARFCERLGVKFPGATRRCEAT
Ga0210384_103267063	3300021432	Soil	MPVERRGWAIRVTADVVNWQQEEPDGRDGRRQLSRDGTSRVTGDSHARICESLGVKFPGATRPR
Ga0126371_127233031	3300021560	Tropical Forest Soil	VERRGQAIRVMITLVNRKREEPAGCGGGRQPSRNGTSRVTGDCHARICERLGVKIPGATRRAASDGR
Ga0226658_100696364	3300022222	Freshwater Microbial Mat	MPVERRGRAIRVMVNLVNWQQEEPTDCGGGRQLSMNGTSRVTGDSQARFCERLGVKLPGPTR
Ga0242667_10299241	3300022513	Soil	MPVERRGQAIRVMINKANWQQEEPTGCGGGRQLSMDGTSRVTGDCHARFCERL
Ga0242660_10868761	3300022531	Soil	MPVERRGRAIRVTAGVVNWQQEEPSGRDGRRQLSRGGTSRVTGDSH
Ga0242675_10608281	3300022718	Soil	MSVERRGQAIRVMVDLANWQQEEPTGCGGGRQLSMDGTSRVTGDSHARFCERLGV
Ga0242666_11178181	3300022721	Soil	VERRGRAIRVMITLVNWQQEEPNGCGGGRQLSMDGTSRVTGDCHARFCERL
Ga0242657_11748871	3300022722	Soil	MSVERRGQAIRVMVDLANWQQEEPTGCGGGRQLSMDGTSRVTGDSHARFC
Ga0208355_11068001	3300025581	Arctic Peat Soil	VERRGQAIRVMIALVNWQQEEPNGFGGGQQLLMNGTSRVNREIYARFRERLRV
Ga0209540_102519291	3300025888	Arctic Peat Soil	VERRGQAIRVRITLVNWQQEEPTGSGGGRQLSMDGTSRVTGDSHARFCERL
Ga0209886_10133822	3300027273	Groundwater Sand	VERRGWGIRAVVDLVNRQREEPTDHGGRRQPSEGATSRVIGDNHARFCEGPGV
Ga0208185_11095611	3300027533	Soil	MPAERRGQAIRVMIKLVNWRQEEPAGYGGGRQLSVDGTSRVSREAQARFREGL
Ga0209799_10275372	3300027654	Tropical Forest Soil	VERRGQVIRVTVTLVNWQQEEPTDRGEGRQLFMDDTSRVSREAQARFREGLGVQFPGATRPSTNLRCSIMPCEIMHLTIGSQHAV
Ga0207428_110692301	3300027907	Populus Rhizosphere	MPVEQRGQAIRVMINLVNWQQDEPTGCGGGRQLSMNGTSRVSREAQARICERLGVR
Ga0209885_10296502	3300027950	Groundwater Sand	VERRGWGIRAVVDLVNRQREEPTDHGGRRQPSGGATSRVIGDNHARFCEGPGVKLPGATR
Ga0302325_126482462	3300031234	Palsa	VERRGQAIRVMINKANWQQEEPTGCGGGRQLSMDGTSRVTGDCHARFCERLGVKFPGAT
Ga0170820_168741911	3300031446	Forest Soil	MSVERRGQVIRVPITLVNWQQEEPTDCGEGRQLFMDDTSRVSREAQARFREGLGVQ
Ga0170819_141538441	3300031469	Forest Soil	MSVERRGQVIRVPITLVNWQQEEPTDCGEGRQLFMDDTSRVSREAQARFREGLGVQLPGAIRPGPERWMALPFGVTP
Ga0170818_1080786252	3300031474	Forest Soil	MSVERRGQVIRVPITLVNWQQEEPTDCGEGRQLFMDDTSRVSREAQARFREGLGVQFPGATRPDT
Ga0318516_103102071	3300031543	Soil	VEPRGQAIRVMIDLVNWQQEEPTGYGGGRQLSLDGTSRVTGDSHARICERLGVKIPGATRRR
Ga0318515_102832712	3300031572	Soil	MPTERRGQAIRVMPTLVNRQREEPTGCDGGRQLSMNGTSRVSREAQARIC
Ga0247727_107047721	3300031576	Biofilm	VERRGWGIHAMIDLANRQREEPTGSGGRRQPSQDATSRVIGDNQARFCESAGVKAPRATR
Ga0318561_105628321	3300031679	Soil	VEQRGQAIRVMITLVNCQQEEPIGYGGGRQLSMDGTSRVTGDSHARICERLGLQIPGAI
Ga0310686_1091048031	3300031708	Soil	VERRGQAIRVMINLANWQQEEPTGCGGGRQLSRDGTSRVTGDCHARFCE
Ga0306917_111831951	3300031719	Soil	VEQRGQAIRVMITLVNWQQDEPIGYGGGRQLSMDGTSRVTGDSHARICERLGV
Ga0318547_110833961	3300031781	Soil	MSVERRGQVIRVPIMLVNWQQEEPTGCDGERQLSMDGTSRVSREAQARICERLGVQFPGATRPSTDG
Ga0307473_101766522	3300031820	Hardwood Forest Soil	MLVERRGRVTESGSTGVNWQQEEPDGLGGRHQPSRGGTSRVTGDGQARICERLGA
Ga0310913_103925471	3300031945	Soil	MPTERRGQAIRVMPTLVNRQREEPTGCDGGRQLSMNGTSRVSREAQARICERLGVRL
Ga0310910_109867452	3300031946	Soil	MSVERRGQVIRVPIALVNWQQEELTDRGEGRQLFMDDTSRVSREAQARFREGLGVKLPGATRPCAEP
Ga0315294_112935231	3300031952	Sediment	VERRGQVTRVAIDLANWQQEEPGGCGGRRQPSLGGTSRVTGDCHARFCERLCQGDAKAFC
Ga0306926_107553272	3300031954	Soil	QAIRVMPTLVNRQREEPTGCDGGRQLSMNGTSRVSREAQARICERLGVRLPIAPG
Ga0306926_115858422	3300031954	Soil	MSVERRGQVIRALITLVNWQQEEPTDCGEGRQLFMDDTSRVSREAQARFREGLGVKLPG
Ga0306926_118350521	3300031954	Soil	VERRGQAIRVMINLVNWQQEEPTGCGGGRQLSIDGTSRVTGDSHARFCERLGVGF
Ga0310911_106481171	3300032035	Soil	VERRGQAIRVVINLVNWQQEEPNGYGGGRQLSMDGTSRVTGDSHARICERLGVKTPGAT
Ga0318532_102250761	3300032051	Soil	VERRGQVIRALITLVNWQQEEPTDCGEGRQFFMDDTSRVSRKAQAQFREGLGVQF
Ga0318533_109941291	3300032059	Soil	VERRGQAIRVVINLVNWQQEEPNGYGGGRQLSMDGTSRVTGDSHARICERLGVQIP
Ga0318533_113500181	3300032059	Soil	MSVERRGQVIRALITLVNWQQEEPTDCGEGRQFFMDDTSRVSRKAQAQFREGLGVQFPGATRPSR
Ga0318504_103901881	3300032063	Soil	MPTERRGQAIRVMPTLVNRQREEPTGCDGGRQLSMNGTSRVSREAQARICERL
Ga0306924_114425431	3300032076	Soil	MPTERRGQAIRVMPTLVNRQREEPTGCDGGRQLSMNGTSRVSREAQARICERLGVRLPGATRPRGAIPR
Ga0307471_1021844741	3300032180	Hardwood Forest Soil	VERRGQAIRVMVNLANWQQEEPTGCGGGRQLSMDGTSRVTGDSHARFCERLGVKLPRPTR
Ga0306920_1023377931	3300032261	Soil	VERRGQAIRVVINLVNWQQEEPNGYGGGRQLSMDGTSRVTGDSHARICERLGVKPPGATR
Ga0335077_109004291	3300033158	Soil	MPVERRGQAIRVMITLVNWQQEEPNGCGGGRQLSMDGTSRVTGDRHARFCERLGVKIPRA
Ga0310914_109336631	3300033289	Soil	VERRGQAIRVVINLVNWQQEEPNGYGGGRQLSMDGTSRVTGDSHARICERLGVKTPGATRLVSRTCFGTVL
Ga0326726_114372982	3300033433	Peat Soil	MSAERRGQAIRVMIELVNRQREEPTGCGGGRQPSMDGTSRVTGDCHARFCERL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053379

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences