Metagenome / Metatranscriptome Family F053511

Basic Information
Family ID	F053511
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	58 residues
Representative Sequence	MPVEGVALIPRCAECEAAWLPADEERWRAYLGSDDLDEPAELVFYCPACAEREFESES
Number of Associated Samples	105
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	39.72 %
% of genes near scaffold ends (potentially truncated)	26.95 %
% of genes from short scaffolds (< 2000 bps)	84.40 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Most Common Taxonomy
Group	Unclassified (50.355 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.730 % of family members)
Environment Ontology (ENVO)	Unclassified (28.369 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.099 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.30% β-sheet: 12.79% Coil/Unstructured: 77.91%
Feature Viewer

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Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF11781	zf-RRN7	2.13
PF03992	ABM	1.42
PF13676	TIR_2	1.42
PF06803	DUF1232	1.42
PF00561	Abhydrolase_1	1.42
PF13088	BNR_2	0.71
PF00196	GerE	0.71
PF04851	ResIII	0.71
PF00140	Sigma70_r1_2	0.71
PF00571	CBS	0.71
PF00578	AhpC-TSA	0.71
PF01243	Putative_PNPOx	0.71
PF07885	Ion_trans_2	0.71
PF04480	DUF559	0.71
PF01435	Peptidase_M48	0.71
PF14235	DUF4337	0.71
PF03176	MMPL	0.71
PF13517	FG-GAP_3	0.71
PF14472	DUF4429	0.71
PF02072	Orexin	0.71
PF08534	Redoxin	0.71
PF00574	CLP_protease	0.71
PF13599	Pentapeptide_4	0.71
PF02518	HATPase_c	0.71
PF01344	Kelch_1	0.71
PF00932	LTD	0.71
PF07883	Cupin_2	0.71
PF09471	Peptidase_M64	0.71
PF01844	HNH	0.71
PF03734	YkuD	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG3339	Uncharacterized membrane protein YkvA, DUF1232 family	Function unknown [S]	1.42
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	1.42
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	1.42
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.71
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.71
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.71
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.71
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.71

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
All Organisms	root	All Organisms	49.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
cellular organisms	root	All Organisms → cellular organisms	49.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	36.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.42 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	34.04 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.42 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	26.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.42 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	25.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.42 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	25.53 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.42 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.71 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459015\|G14TP7Y01A2LXG	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
2170459019\|G14TP7Y01B4KXO	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
2189573002\|GZIGXIF02HGSSZ	Not Available	503	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2163213	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14496634	Not Available	926	Open in IMG/M
3300000550\|F24TB_11451031	All Organisms → cellular organisms → Bacteria	1457	Open in IMG/M
3300000550\|F24TB_16704004	Not Available	636	Open in IMG/M
3300000956\|JGI10216J12902_101217966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1420	Open in IMG/M
3300000956\|JGI10216J12902_102275787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2245	Open in IMG/M
3300000956\|JGI10216J12902_106494747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1086	Open in IMG/M
3300000956\|JGI10216J12902_106867493	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300000956\|JGI10216J12902_107121363	Not Available	1702	Open in IMG/M
3300000956\|JGI10216J12902_110343425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1008	Open in IMG/M
3300000956\|JGI10216J12902_112683195	Not Available	625	Open in IMG/M
3300001431\|F14TB_100576967	Not Available	1132	Open in IMG/M
3300001431\|F14TB_101925480	Not Available	552	Open in IMG/M
3300004114\|Ga0062593_100504278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1123	Open in IMG/M
3300004114\|Ga0062593_100788737	Not Available	943	Open in IMG/M
3300004114\|Ga0062593_101270820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	778	Open in IMG/M
3300004114\|Ga0062593_101668604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	695	Open in IMG/M
3300004114\|Ga0062593_102521959	Not Available	582	Open in IMG/M
3300004114\|Ga0062593_102770058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300004156\|Ga0062589_100794432	Not Available	856	Open in IMG/M
3300004156\|Ga0062589_100898192	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300004463\|Ga0063356_103538461	Not Available	673	Open in IMG/M
3300004479\|Ga0062595_100106485	Not Available	1508	Open in IMG/M
3300004479\|Ga0062595_100406533	Not Available	978	Open in IMG/M
3300004643\|Ga0062591_100094788	All Organisms → cellular organisms → Bacteria	1907	Open in IMG/M
3300004643\|Ga0062591_101211948	All Organisms → cellular organisms → Bacteria → Proteobacteria	736	Open in IMG/M
3300005093\|Ga0062594_101222140	Not Available	747	Open in IMG/M
3300005093\|Ga0062594_102761732	Not Available	545	Open in IMG/M
3300005294\|Ga0065705_10107699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5594	Open in IMG/M
3300005344\|Ga0070661_100875455	Not Available	740	Open in IMG/M
3300005406\|Ga0070703_10167856	Not Available	838	Open in IMG/M
3300005434\|Ga0070709_10526193	Not Available	902	Open in IMG/M
3300005435\|Ga0070714_100324777	Not Available	1440	Open in IMG/M
3300005435\|Ga0070714_101836511	Not Available	592	Open in IMG/M
3300005435\|Ga0070714_102047092	Not Available	558	Open in IMG/M
3300005437\|Ga0070710_10014748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3938	Open in IMG/M
3300005437\|Ga0070710_10456874	Not Available	867	Open in IMG/M
3300005439\|Ga0070711_100026055	All Organisms → cellular organisms → Bacteria	3830	Open in IMG/M
3300005439\|Ga0070711_100818969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790	Open in IMG/M
3300005518\|Ga0070699_101226141	Not Available	688	Open in IMG/M
3300005535\|Ga0070684_101500655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	635	Open in IMG/M
3300005578\|Ga0068854_100912539	Not Available	773	Open in IMG/M
3300005842\|Ga0068858_101339969	Not Available	705	Open in IMG/M
3300006028\|Ga0070717_11351838	Not Available	647	Open in IMG/M
3300006173\|Ga0070716_100156321	All Organisms → cellular organisms → Bacteria → Proteobacteria	1473	Open in IMG/M
3300006196\|Ga0075422_10219048	Not Available	789	Open in IMG/M
3300006237\|Ga0097621_100047431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3481	Open in IMG/M
3300006625\|Ga0101569_11351271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	534	Open in IMG/M
3300006844\|Ga0075428_100100952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3145	Open in IMG/M
3300006852\|Ga0075433_10013396	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6665	Open in IMG/M
3300006854\|Ga0075425_100030937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5936	Open in IMG/M
3300006854\|Ga0075425_102659747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300006854\|Ga0075425_103156726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300006904\|Ga0075424_101927524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300009094\|Ga0111539_10768497	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300009156\|Ga0111538_13792879	Not Available	523	Open in IMG/M
3300009174\|Ga0105241_12663648	Not Available	503	Open in IMG/M
3300009176\|Ga0105242_10416030	Not Available	1258	Open in IMG/M
3300009840\|Ga0126313_10371185	Not Available	1131	Open in IMG/M
3300010036\|Ga0126305_10054516	Not Available	2278	Open in IMG/M
3300010037\|Ga0126304_10559783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300010038\|Ga0126315_10379242	Not Available	886	Open in IMG/M
3300010040\|Ga0126308_10010280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4696	Open in IMG/M
3300010040\|Ga0126308_10018477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3713	Open in IMG/M
3300010042\|Ga0126314_10103404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1938	Open in IMG/M
3300010371\|Ga0134125_10830309	Not Available	1016	Open in IMG/M
3300010373\|Ga0134128_10170596	All Organisms → cellular organisms → Bacteria	2457	Open in IMG/M
3300010373\|Ga0134128_10595091	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300010375\|Ga0105239_11274192	Not Available	848	Open in IMG/M
3300010401\|Ga0134121_10245221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1566	Open in IMG/M
3300010999\|Ga0138505_100032450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	716	Open in IMG/M
3300011000\|Ga0138513_100005356	All Organisms → cellular organisms → Bacteria	1440	Open in IMG/M
3300012207\|Ga0137381_11312091	Not Available	616	Open in IMG/M
3300012509\|Ga0157334_1051742	Not Available	569	Open in IMG/M
3300012899\|Ga0157299_10019668	Not Available	1265	Open in IMG/M
3300012902\|Ga0157291_10139236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300012914\|Ga0157297_10337022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300012951\|Ga0164300_10015509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2521	Open in IMG/M
3300012955\|Ga0164298_10041867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2143	Open in IMG/M
3300012958\|Ga0164299_10119989	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1404	Open in IMG/M
3300012960\|Ga0164301_10087294	Not Available	1747	Open in IMG/M
3300012961\|Ga0164302_10121453	Not Available	1487	Open in IMG/M
3300012984\|Ga0164309_10194401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1390	Open in IMG/M
3300012989\|Ga0164305_11738584	Not Available	561	Open in IMG/M
3300013100\|Ga0157373_10609680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	795	Open in IMG/M
3300013306\|Ga0163162_10470137	Not Available	1389	Open in IMG/M
3300014969\|Ga0157376_10186215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1901	Open in IMG/M
3300014969\|Ga0157376_11582242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	689	Open in IMG/M
3300015371\|Ga0132258_10013007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	17591	Open in IMG/M
3300015371\|Ga0132258_10015755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	16200	Open in IMG/M
3300015372\|Ga0132256_100635613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1182	Open in IMG/M
3300015373\|Ga0132257_100078697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3748	Open in IMG/M
3300015373\|Ga0132257_100292868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1954	Open in IMG/M
3300015374\|Ga0132255_100828806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1380	Open in IMG/M
3300017792\|Ga0163161_11703435	Not Available	558	Open in IMG/M
3300018072\|Ga0184635_10310789	Not Available	615	Open in IMG/M
3300018081\|Ga0184625_10381929	Not Available	729	Open in IMG/M
3300019356\|Ga0173481_10001145	All Organisms → cellular organisms → Bacteria	6264	Open in IMG/M
3300019362\|Ga0173479_10129590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	980	Open in IMG/M
3300020016\|Ga0193696_1003846	All Organisms → cellular organisms → Bacteria	4294	Open in IMG/M
3300020016\|Ga0193696_1051844	Not Available	1082	Open in IMG/M
3300021363\|Ga0193699_10360238	Not Available	605	Open in IMG/M
3300022756\|Ga0222622_10148848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1507	Open in IMG/M
3300022880\|Ga0247792_1032403	Not Available	920	Open in IMG/M
3300024177\|Ga0247686_1024337	Not Available	695	Open in IMG/M
3300024181\|Ga0247693_1030894	Not Available	739	Open in IMG/M
3300024279\|Ga0247692_1080639	Not Available	512	Open in IMG/M
3300024283\|Ga0247670_1041280	Not Available	831	Open in IMG/M
3300025901\|Ga0207688_10371363	Not Available	884	Open in IMG/M
3300025912\|Ga0207707_10421855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1144	Open in IMG/M
3300025915\|Ga0207693_10172907	Not Available	1700	Open in IMG/M
3300025916\|Ga0207663_11750868	Not Available	500	Open in IMG/M
3300025918\|Ga0207662_10631703	All Organisms → cellular organisms → Bacteria → Acidobacteria	747	Open in IMG/M
3300025921\|Ga0207652_11590668	Not Available	558	Open in IMG/M
3300025929\|Ga0207664_10538502	Not Available	1047	Open in IMG/M
3300025936\|Ga0207670_11397432	Not Available	594	Open in IMG/M
3300025936\|Ga0207670_11618301	Not Available	551	Open in IMG/M
3300025940\|Ga0207691_10362526	All Organisms → cellular organisms → Bacteria	1239	Open in IMG/M
3300025981\|Ga0207640_10542866	Not Available	975	Open in IMG/M
3300026089\|Ga0207648_10078080	All Organisms → cellular organisms → Bacteria	2888	Open in IMG/M
3300028146\|Ga0247682_1092390	Not Available	561	Open in IMG/M
3300028712\|Ga0307285_10131418	Not Available	677	Open in IMG/M
3300028755\|Ga0307316_10176344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	767	Open in IMG/M
3300028778\|Ga0307288_10022290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2041	Open in IMG/M
3300028819\|Ga0307296_10085162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1686	Open in IMG/M
3300028881\|Ga0307277_10488309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300031198\|Ga0307500_10120266	Not Available	724	Open in IMG/M
3300031226\|Ga0307497_10282543	Not Available	754	Open in IMG/M
3300031226\|Ga0307497_10368132	Not Available	678	Open in IMG/M
3300031938\|Ga0308175_100003574	All Organisms → cellular organisms → Bacteria	10785	Open in IMG/M
3300031938\|Ga0308175_102160100	All Organisms → cellular organisms → Bacteria → Terrabacteria group	624	Open in IMG/M
3300031938\|Ga0308175_102166395	Not Available	623	Open in IMG/M
3300031938\|Ga0308175_102671569	Not Available	558	Open in IMG/M
3300031938\|Ga0308175_102865916	Not Available	538	Open in IMG/M
3300031995\|Ga0307409_100201302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1782	Open in IMG/M
3300031995\|Ga0307409_102672596	Not Available	527	Open in IMG/M
3300032002\|Ga0307416_101509713	Not Available	778	Open in IMG/M
3300034666\|Ga0314788_128354	Not Available	599	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.76%
Host-Associated	Host-Associated	24.82%
Engineered	Engineered	1.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.63%
Plants	Host-Associated → Plants	24.82%
Aquatic	Environmental → Aquatic	2.13%
Solid Waste	Engineered → Solid Waste	1.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	9.22%
Sediment	Environmental → Aquatic → Sediment	2.13%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.42%
Grass	Engineered → Solid Waste → Grass	1.42%
Roots	Host-Associated → Plants → Roots	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.48%
Loam	Environmental → Terrestrial → Soil → Loam	17.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.13%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.13%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.42%
Composting	Engineered → Solid Waste → Grass → Composting	1.42%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.66%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.64%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.67%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.55%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.55%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.13%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.42%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	1.42%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	9.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.38%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.38%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.55%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.84%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.13%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.13%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.42%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.42%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	1.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.71%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
2189573002	Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006625	Soil microbial communities from the Leymus chinensis steppe, China - after adding 10.5 g N m- 2, yr-1	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022880	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6	Environmental	Open in IMG/M
3300024177	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK27	Environmental	Open in IMG/M
3300024181	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK34	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028146	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK23	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300034666	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4PV_04253060	2170459015	Switchgrass, Maize And Mischanthus Litter	MLSRSRVIPRCAECDARWLPADDERWRAYLGSDDLGEPAELGFYCPECAEQEFGDD
4MG_01927470	2170459019	Switchgrass, Maize And Mischanthus Litter	MHSERVATIPRCAECEAHWLPADHDRWRAYLTDDEPAELAFYCRECAEREFRDGPV
FE1_06768180	2189573002	Grass Soil	MRGESVALIPRCAECEAAWLPADEDRWQAYLGCDENLDEPAELVFYCPECAEREFSD
ICChiseqgaiiDRAFT_21632132	3300000033	Soil	MPVEGVALILRCTECEAAWLPADEQRWRAYPSGHDLNEPADVFFYCRRCAEREFGGRSA*
ICChiseqgaiiFebDRAFT_144966342	3300000363	Soil	VSAEQLALIPRCAECEAVCLPADEERWRAYLGGDDLEEPPEVVFFCPDCAERGFGGNHT*
F24TB_114510312	3300000550	Soil	LIPECAECDAHWLPADDQRWHAYLGGDDLDAPAELVFYCPTCAERDFGDD*
F24TB_167040041	3300000550	Soil	ARVSAEQVALIPHCPECEASWLPADDERWRAYLGGDEPPELALNSPDCAEREFGGRN*
JGI10216J12902_1012179663	3300000956	Soil	MSAGSVALIPHCAECDAEWLPAEEERWRAYLGGEDLDAPAEVVFYCSECAEREFGR*
JGI10216J12902_1022757872	3300000956	Soil	VSAEQVALIPHCPECEASWLPADDERWRAYLGGDEPPELALNSPDCAEREFGGRN*
JGI10216J12902_1064947473	3300000956	Soil	VRTEDVARIPRCAECGATWLPADEERWRAYLGGDDLDEPGELVFYCVRCAEREFGDE*
JGI10216J12902_1068674932	3300000956	Soil	MPVEGLRLVPACAECGAVWLPADEERWSAYHGGDDLGEPAELVFYCPECAEREFEAQ*
JGI10216J12902_1071213631	3300000956	Soil	VSADSIALIPRCAECEAVWLPGGEERWQAHLGSDDLDEPGEVAFYCPACAEREFAGD*
JGI10216J12902_1103434253	3300000956	Soil	MPVEPVALIPRCAECEAAWLPADEERWRAYLGSDDLDEPPEVVFYRPACAEREFGDE*
JGI10216J12902_1126831952	3300000956	Soil	MQPVEGVAPTLRCSECELPWLRSDDERWGAYLTDDEPAEVAFYCPNCADREFGS*
F14TB_1005769672	3300001431	Soil	VSAEAVALIPQCAKRREVWLPADEERWQARLTDDKPAELVFYCPECAEREFGPLHPVRVYGREAF*
F14TB_1019254801	3300001431	Soil	MPLERVALIPRCAECEAAWLPADEERWQAWLTDDEPPELVFYCPACAEREFGND*
Ga0062593_1005042782	3300004114	Soil	VSLEGVALIPRYMECGAVWLPADEERWRAYHGGDDLDEPAELFFYCPECAEREFGGA*
Ga0062593_1007887372	3300004114	Soil	MPVEGVALIPRCEECDALWLPADPERWRAYLDCEEDLDERAELYFYCPECAEREFGESHG
Ga0062593_1012708202	3300004114	Soil	RGRRLGLVSANSVALIPSCTECEAVWLPADEERWRAYLGGDDLDEPPELVFFCPECAEREFS*
Ga0062593_1016686041	3300004114	Soil	VSLEGVALIPKGVECGAVWLAADEERWQAYHGGDDLDEPDEVVFYCPRCAEREFGD*
Ga0062593_1025219591	3300004114	Soil	MRTEGVATIPRCTECDAVWLPADEDRWRAYLGCDEYLDMPAEVVFYCLACAQREFGGG*
Ga0062593_1027700581	3300004114	Soil	RFDAGREAMRLLPVPSEKRMHTEGVAIIPRCAECEAHWLPADEERWRAYRTDDEPPELVFYCPACAEREFGGD*
Ga0062589_1007944322	3300004156	Soil	MNAERVALTPECAECEAVWLPADEERRSAYLGCDEYLDEPAEVVFYGPRCAEREFGGEVDSADS*
Ga0062589_1008981922	3300004156	Soil	MRLLPVPSEKRMHTEGVAIIPRCAECEAHWLPADEERWRAYRTDDEPPELVFYCPACAEREFGGD*
Ga0063356_1035384612	3300004463	Arabidopsis Thaliana Rhizosphere	MPLESVALIPRCAECEAHWLPADEERWRAYLGSDDLDEPPELVFYCSDCAEREFEPN*
Ga0062595_1001064853	3300004479	Soil	MIPSCAECGTRWLTVDDERWRAYLGSHDLDEPPEGVFYCPACVEREFGGN*
Ga0062595_1004065332	3300004479	Soil	VSAESVALIPDCAECGAAWLPADKEGRWRAYLGGDEHFDERADLVFYCSECAEREFGASS
Ga0062591_1000947883	3300004643	Soil	MSAGRAALIPQCAECDARWLQADDERWRAYLGGDDLDEPAEVVFYCPSCAEREFGADS*
Ga0062591_1012119482	3300004643	Soil	MPLESVALIPKCAECEAVWLPDAEERWRAHLGIEEHVDEPAEVVFYCPDCAEREFDA*
Ga0062594_1012221401	3300005093	Soil	MSAERVALIPACAECEARWLPTDDERWRAYLGGDDLDESPEIVFYCPRCAEREFGGD*
Ga0062594_1027617321	3300005093	Soil	MPVEGVALIPRCAECEAVWLPSDGERWRAYIGRDEHFDEPAGLVFYCSDCAEREFGGEA*
Ga0065705_101076992	3300005294	Switchgrass Rhizosphere	MHIEGVATISRCAECEAHWLPADEERWRAYLGSDTLDEPAEVVFYCPDCAEREFEN*
Ga0070661_1008754551	3300005344	Corn Rhizosphere	MPVEGVALIPRCVECEAAWLPADDERWRAYLTDDEPAAVGFYCPDCAEREFSD*
Ga0070703_101678562	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MPVEGVALIPRCAECEAVWLPSDGERWRAYIGRDEHFDEPAGLVFYCSDC
Ga0070709_105261931	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RREAEGAAMIPRCAECEAAWLPADEERWRANLGCDEFFDPPEIVFYCRGCAEREFANN*
Ga0070714_1003247772	3300005435	Agricultural Soil	MRADQVALVPQCTECDARWRPADEDRWRAYLGCEEDLDEPTELFFYCPECAEREFGAG*
Ga0070714_1018365111	3300005435	Agricultural Soil	LCVRLDRMSAKSVALMPTCTECEAVWLPADEERWRAYLGCDEDLDEPGEVFFYCPPCAERAFGGA*
Ga0070714_1020470922	3300005435	Agricultural Soil	MIPRCAECEAAWLPADEERWRANLGCDEFFDPPEIVFYCRGCAEREFANN*
Ga0070710_100147487	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSAESVALFPECVECKAVWLPADEERWQAHLGCDEHLDEPAELVLYCPWCAEREFGDDS*
Ga0070710_104568743	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	EADEPRRTAFRLAGPALCVRLDRMSAKSVALMPTCTECEAVWLPADEERWRAYLGCDEDLDEPGEVFFYCPPCAERAFGGA*
Ga0070711_1000260552	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSAKSVALMPTCTECEAVWLPADEERWRAYLGCDEDLDEPGEVFFYCPPCAERAFGGA*
Ga0070711_1008189692	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSAERVALIPKCAECKAVWLPVDEERWRAYLGCDEYLDGPAEVVFYCPECAEREYDTD*
Ga0070699_1012261411	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSAESVALIPKCVECKAVWLPADEERWRAFLGCDEQLDEPAEVALYCPECAEREFRGA*
Ga0070684_1015006552	3300005535	Corn Rhizosphere	VQVDGVALIPHGAECGERRLPGNDERWRAFHAGDDLDEPAELVFYCPECAEREW*
Ga0068854_1009125393	3300005578	Corn Rhizosphere	MPVEGVALIPRCAECEAVWLPSDGERWRAYIGRDEHFDEPAGLVFYCADCAEREFGGEA*
Ga0068858_1013399692	3300005842	Switchgrass Rhizosphere	MPVEGVALIPRCVECEAAWLPSDRERWRAYIGRDEHFYEPAELFFYCSDCAEREFGGEA*
Ga0070717_113518381	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	ERVALIPACAECEARWLPTDDERWRAYLGGDDLDESPEIVFYCPRCAEREFGGD*
Ga0070716_1001563211	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPVEGVALIPRCEECDAPWLPGDPERWRAYPGCEEDLDELAELFFYCPECGEREFGESHG
Ga0075422_102190481	3300006196	Populus Rhizosphere	GVAIIPRCAECEGHWLPADEARWRAYLGGDDLDGPAEVVFYCPACAEREFGDEPAF*
Ga0097621_1000474311	3300006237	Miscanthus Rhizosphere	MSAESVALFRECVECKAVWLPADEERWQANLGCNEHRDEPAEVVLYCPECAERE
Ga0101569_113512712	3300006625	Soil	VSAEQVALIPRCAECEAHWLPTNEEARWRAYLSGDALDEPAEVSFYCPACAERAFGGD*
Ga0075428_1001009523	3300006844	Populus Rhizosphere	MHVEGVAIIPRCAECEGHWLPADEARWRAYLGGDDLDEPRGVVFYCPACAEREFGDEPAF
Ga0075433_100133964	3300006852	Populus Rhizosphere	MHVEGVAIIPRCAECEGHWLPADEARWRAYLGGDDLDGPAEVVFYCPACAEREFGDEPAF
Ga0075425_1000309374	3300006854	Populus Rhizosphere	MSAKSVALLPSCTECQAVWLPADEERWRAYLGCDEELEEPAEVFFYRPECAEREFRHE*
Ga0075425_1026597472	3300006854	Populus Rhizosphere	VTSYGVALIPRCTECEANWLPADEERWRAYLGSDNLNEADEVFFYCPECAEREFGES*
Ga0075425_1031567262	3300006854	Populus Rhizosphere	VSAESVALIPECAECEAVWLPADEERWRAYHAGDDLDAPAELFFYCPACAEREFDSDY*
Ga0075424_1019275242	3300006904	Populus Rhizosphere	LGRRRAGGRSAEIAVTSYGVALIPRCTECEANWLPADEERWRAYLGSDNLNEADEVFFYCPECAEREFGES*
Ga0111539_107684971	3300009094	Populus Rhizosphere	MPIEGVALIPRCAECEAAWLPANEERWRACLGGDDLDEPPEVVFYCAACWWREFGGD*
Ga0111538_137928792	3300009156	Populus Rhizosphere	PLHIEGVATIPRCAECEAHWLPADEARWRAYLGGDELDEPAELVFYCPECAEREFGSD*
Ga0105241_126636481	3300009174	Corn Rhizosphere	VRVLGLSFLISCAECRKPWVDDERWRAYLGVDEHLDESAELAFYPRCAEREFGGD*
Ga0105242_104160303	3300009176	Miscanthus Rhizosphere	MRVEGVALIPRCAECEAVWLPSDGERWRAYIGRDEHFDEPAGLVFYCSDCAEREFGGEA*
Ga0126313_103711851	3300009840	Serpentine Soil	MALESVALIPKCAECEAVWLPAAGERWLAHLGGDEFDEPSHFVFGQQADLQ
Ga0126305_100545161	3300010036	Serpentine Soil	MPLESIALIPNRVECEAVWLPADEERWHAHLGGDDLDEPAELVFYCPDCAVREFGGHETS
Ga0126304_105597833	3300010037	Serpentine Soil	VPVEGVALIPSCAECEAVWLPADEERWRAHLGGDDLDEPPEVVFYCRTVRSG
Ga0126315_103792422	3300010038	Serpentine Soil	RHMTVEGVALIPRCAECEAAWLPADEERWRVYFGSDTLDEPGEVVFYCPNCAEREFSDD*
Ga0126308_100102803	3300010040	Serpentine Soil	VSAEQVALIPRCAECEAHWLPADEERWRAYLGSNDLDEPAEVVFYCPECSEREFGGD*
Ga0126308_100184775	3300010040	Serpentine Soil	MTVEGVALIPRCAECEAAWLPADEERWRVYFGSDTLDEPGEVVFYCPNCAEREFSDD*
Ga0126314_101034041	3300010042	Serpentine Soil	LSAESVALIRSAECEAVWLPDDEERWGAHLGADDLDEPAELVFYCPGCAEREFGGS*
Ga0134125_108303092	3300010371	Terrestrial Soil	MSAESVALFGECVECKAAWLPADEERWQANLGCDEHRDEPAQVVLYCPECAEREFGGA*
Ga0134128_101705963	3300010373	Terrestrial Soil	MPVEGVALIPRCVECEAAWLPSDRERWRAYIGRDEHFDEPAGLVFYCSDCAEREFGGEA*
Ga0134128_105950913	3300010373	Terrestrial Soil	MSAESVALIPKCVECNAVWLPADEERWRAFLGCDEQLDEPAEVALYCPECAEREFRGA*
Ga0105239_112741921	3300010375	Corn Rhizosphere	MHIEGVCIIHCCAECGAHWLSADEERWQAHLGSDDLDEPPEVVFYCRGCAKREFGDA*
Ga0134121_102452211	3300010401	Terrestrial Soil	MSAESVALIPKCVECKAVWLPADEERWRAFLGCDEQLDEPAEVALYCPECAEREFGGA*
Ga0138505_1000324503	3300010999	Soil	VGIPHRVSAEQVALIPRCAECEAHWLPAVEERWRPCLGSYNLDEPPDLVFYCPACAEREFGESP*
Ga0138513_1000053562	3300011000	Soil	VGIPHRVSAEQVALIPRCAECEAHWLPAVEERWRPCLGSYNLDEPPDLVFYCPACADREFG*
Ga0137381_113120912	3300012207	Vadose Zone Soil	MSAESVALIPECAECDARWLPADEERWEAYLTDDEPPKLAFYCPQCAEREFGDDSRSSGSGRLVDAP*
Ga0157334_10517421	3300012509	Soil	MRKEGVAINPRCAECEAHWLPADEECWQAHLGSDDLDEPPEVVFYCPRCAGREFGAEKAV
Ga0157299_100196682	3300012899	Soil	MPLESVALIPRCAECEAHWLPADEERWRAYLGSDDLDEPPELVFYCSDCA
Ga0157291_101392361	3300012902	Soil	KRMHTEGVAIISRCAECEAHWLPADEERWRAYRTDDEPPELVFYCPACAEREFGGD*
Ga0157297_103370222	3300012914	Soil	RLGACLSRGRALIPACAECEAVWLPADEARWQASLTDDEPPEVILYCPECAEREFGDR*
Ga0164300_100155094	3300012951	Soil	MPVEGVALIPRCLECEAAWLPVDDERWQAYLTDDEPAEVVFYCADCAEREFD*
Ga0164298_100418672	3300012955	Soil	MPVEGVALIPRCLECEAAWLPVDDERWQAYLTDDEPAEVVFYCQDCAQSEFGSDS*
Ga0164299_101199891	3300012958	Soil	VPDQVALVPECTECGAQWLPGDLGRWHAYLGVDEDLDESAEVGFYCPDCAEREFGGA*
Ga0164301_100872942	3300012960	Soil	MVNSDRITLIPECAQCQVRWLPAHEERWRAYLAGDDLDESAELVVYCPECSEREFGG*
Ga0164302_101214533	3300012961	Soil	MVNSDRITLIPECAQCQVRWLPAHEERWRAYLAGDDLDESAELVFYCPECSEREFGG*
Ga0164309_101944013	3300012984	Soil	MPVEGVELIPRCLECEAAWLPVDDERWQAYLTDDEPAEVVFYCADCAEREFD*
Ga0164305_117385841	3300012989	Soil	MFVEGVALIPRCAECEAVWLPSDRERWRAYIGRDEHFDEPAGLVFYCSDCAEREFGDDN*
Ga0157373_106096802	3300013100	Corn Rhizosphere	ALIPRCMECGAVWLPADEERWRAYHGGDELDEPAELFFYWPKCAEREFRGA*
Ga0163162_104701372	3300013306	Switchgrass Rhizosphere	MHIEGVCIIHCCAECGAHWLSAAEERWQAHLGSDDLDEPPEVVFYCRGCAKREFGDA*
Ga0157376_101862151	3300014969	Miscanthus Rhizosphere	MSAESVALFRECVECKAVWLPADEERWQANLGCDEHRDEPAEVVLYCPECAEREFGGA*
Ga0157376_115822422	3300014969	Miscanthus Rhizosphere	MSAERVALIPACAECEARWLPTDDERWRAYLGGDDLDESPEIVFYCPRCAER
Ga0132258_1001300720	3300015371	Arabidopsis Rhizosphere	MKAAAIIPTCAECGRSWLPADEERWQAHLGSDDLDEPPEVVFYCPASAEREFGGA*
Ga0132258_100157552	3300015371	Arabidopsis Rhizosphere	MRGVALIPICAECGGKWLPDDEERWQAYLGVEEHIDEPAELVFYCPECAEREFGGD*
Ga0132256_1006356134	3300015372	Arabidopsis Rhizosphere	RQMPIQGVALVPRCAECEAAWLPADEERWRACLGGDELDELPEVVFYCEACWSREFGGD*
Ga0132257_1000786974	3300015373	Arabidopsis Rhizosphere	MRKEGVAINPRCAECEAHWLPADAECWQAHLGSDDLDEPPEVVFYCPRCAEREFGGD*
Ga0132257_1002928682	3300015373	Arabidopsis Rhizosphere	MPIQGVALVPRCAECEAAWLPADEERWRACLGGDELDELPEVVFYCEACWSREFGGD*
Ga0132255_1008288061	3300015374	Arabidopsis Rhizosphere	MPIQGVALIPRCAECEAAWLPADEERWRACLGGDELDELPEVVFYCEACWSREFGGD*
Ga0163161_117034352	3300017792	Switchgrass Rhizosphere	MPVEGVALIPRCAECEAVWLPSDGERWRAYIGRDEHFDEPAGLVFYCSDCAEREFGGEA
Ga0184635_103107891	3300018072	Groundwater Sediment	VGIPHRVSAEQVALIPRCAECEAHWLPAVEERWRPCLGSYNLDEPPDLVFYCPACADREF
Ga0184625_103819292	3300018081	Groundwater Sediment	VSAKSLALIPQCAECDACWLPADEDRWRAYLGSDDLDGPVEIVLYCPNCAEREFGDP
Ga0173481_100011456	3300019356	Soil	MPLESVALIPRCAGCEAHWLPADEERWRAYLGSDDLDEPPELVFYCSDCAEREFEPN
Ga0173479_101295901	3300019362	Soil	VSLEGVALIPKGVECGAVWLAADEERWQAYHGGDDLDEPDEVVFYCPRCAEREFGD
Ga0193696_10038462	3300020016	Soil	MPVEGVALVPTCVECEAAWLPADEERWHAYLGGDDLDEPAELVFYCPRCAEREFGDDS
Ga0193696_10518443	3300020016	Soil	GSWTERGLNSVLVQAENVALIPRCAECDAAWLPSDEERWQAHLGCDENLDEPGEIVFYCAEREFGR
Ga0193699_103602381	3300021363	Soil	MPVEGVALIPMCVECEAAWLPVDDERWQAYLTDDEPVEVVFYCLDCAESEFGSDD
Ga0222622_101488484	3300022756	Groundwater Sediment	VRAENVVLIPKCAECDAIWLPADKERWRAYLGCDDLDEPAELVFYCAEFAEREFRDA
Ga0247792_10324031	3300022880	Soil	MPLESVALIPRCAECEAHWLPADEERWRAYLGSDDLDEPPELVFYCSDCAEREFEPN
Ga0247686_10243372	3300024177	Soil	MPVEGVALIPRCAECEAVWLPSDGERWRAYIGRDEHFDEPAGLVFYCSDCAEREFGDDN
Ga0247693_10308941	3300024181	Soil	VSLESVALIPSCVECGAVWLAADEERWRAYHGGDDLDEPAELFLYCPDCAVREFGTNGST
Ga0247692_10806391	3300024279	Soil	VEGVALIPRCTECEAAWLPADEERWRAYHGGDDLDEPAELFFYCPACSEREFGDELRA
Ga0247670_10412801	3300024283	Soil	VALILRCVECGAVWLPADEERWRAYHGGDDVDEPAELFYCPECADREFGGA
Ga0207688_103713631	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MPVEGVALIPRCAECEAVWLPSDGERWRAYIGRDEHFYEPAELFFYCSDCAEREFGGEA
Ga0207707_104218551	3300025912	Corn Rhizosphere	MSAESVALFRECVECKAVWLPADEERWQANLGCDEHRDEPAQVVLYCPECAEREFGGA
Ga0207693_101729071	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSAKSVALMPTCTECEAVWLPADEERWRAYLGCDEDLDEPGEVFFYCPPCAERAFGGA
Ga0207663_117508681	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRADQVALVPQCTECDARWRPADEDRWRAYLGCEEDLDEPTELFFYCPECAERE
Ga0207662_106317032	3300025918	Switchgrass Rhizosphere	MPVEGVALIPRCVECEAAWLPSDRERWRAYIGRDEHFYEPAELFFYCSDCAEREFGGEA
Ga0207652_115906682	3300025921	Corn Rhizosphere	MPVEGVALIPRCEECDALWLPGDPERWRAYPGCGEDLDEPAELFFYCPEC
Ga0207664_105385021	3300025929	Agricultural Soil	MSAKSVALMPTCTECEAVWLPADEERWRAYLGCDEDLDEPGEVCFYCPPCAERAFGGA
Ga0207670_113974321	3300025936	Switchgrass Rhizosphere	MPVEGVALIPRCVECEAAWLPSDRERWRAYIGRDEHFYEPAELFFYCSDCAEREFGECE
Ga0207670_116183011	3300025936	Switchgrass Rhizosphere	RVALIPACAECEARWLPTDDERWRAYLGGDDLDESPEIVFYCPRCAEREFGGD
Ga0207691_103625261	3300025940	Miscanthus Rhizosphere	MPVEGVALIPRCAECEADWLPSDGERWRAYIGRDEHFDEPAGLVFYCSDCAEREFGGEA
Ga0207640_105428661	3300025981	Corn Rhizosphere	MPVEGVALIPRCAECEAVWLPSDGERWRAYIGRDEHFDEPAGLVFYCSDCAEREFG
Ga0207648_100780806	3300026089	Miscanthus Rhizosphere	MPVEGVALIPRCAECEAVWLPSDGERWRAYIGRDDHFDEPAGLVFYCSDCAEREFGGEA
Ga0247682_10923902	3300028146	Soil	VEGVALIPRCEECDALWLPGDPERWRAYPGCGEDLDEPAELFFYCPECGEREFGESHG
Ga0307285_101314181	3300028712	Soil	MRAGSVALIPRCAECEARWLPADDERWRAYLGGDDLDEPGEVVIYCPQCAEPEFGERHSR
Ga0307316_101763441	3300028755	Soil	VLIPKCAECAAIWLPADTERWRAYLGCDDLDEPAELVFYCAEFAEREFRDA
Ga0307288_100222901	3300028778	Soil	LIPRCAECEARWLPADDERWRAYLGGDDLDEPGEVVIYCPQCAEPEFGERHSRV
Ga0307296_100851624	3300028819	Soil	MRAGSVALIPRCAECEARWLPADDERWRAYLGGDDLDEPGEVVIYCPQCAEP
Ga0307277_104883092	3300028881	Soil	VSAEQVALIPRCAECDALWLPADEERWSAYLTDDEPPGVIFYCPECAERDFGHSLRLNVGDEQMD
Ga0307500_101202662	3300031198	Soil	EQVALVPRCAECEAACLPADNQRWRAYLGGDDLDVPPELVFYCSDCAEREFSSD
Ga0307497_102825433	3300031226	Soil	VVFGDDRLLAVNAKSVALIPKCAECESAWLPADEERWRAYLGGDDLNEPVEVVFYCPSCAGRELGPSP
Ga0307497_103681321	3300031226	Soil	VSAEQVARIPLCAECEAVWLPADKERWLAYLGGDDLDEPAELVFYCSGCAEREFGRY
Ga0308175_1000035745	3300031938	Soil	MPLEGIPVIPKCAECEAAWLPANKERWHAYLTDDEPAEVVFYCPDCAEREFPLS
Ga0308175_1021601003	3300031938	Soil	MPIESVAIIPRCTECEARWLPADDERWRVYLGSDDLDEPPELAFYCPECAEREFGDR
Ga0308175_1021663952	3300031938	Soil	MPLEGVALIPRCAECEAGWLPADKERWSAYLGGDDLDEPAELLFYCPACAERGCGDG
Ga0308175_1026715691	3300031938	Soil	MPVEGVALIPRCAECEAAWLPADEERWRAYLGSDDLDEPAELVFYCPACAEREFESES
Ga0308175_1028659162	3300031938	Soil	MRIERVALIPECAECSARWLPADAERWRAHLAGDDLDEPAELVFYCPECAERKFCN
Ga0307409_1002013021	3300031995	Rhizosphere	MTVEGVALIPRCAECEAAWLPADEERWRVYFGSDTLDEPGEVVFYCPNCAEREFSDD
Ga0307409_1026725961	3300031995	Rhizosphere	LSAESVALIRSAECEAVWLPDDEERWGADDLDEPAELVFYCPGCAEREFG
Ga0307416_1015097131	3300032002	Rhizosphere	VSAEQVALIPRCAESEAHWLPADEERWRAYLGSNDLDEPAEVVFYCPECSEREFGG
Ga0314788_128354_414_593	3300034666	Soil	VSLEGVALIPSCVECGSVWLWLPADEERWRADHGGDDLDEPAELFFYCPRCAASEFDGA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053511

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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