Metagenome / Metatranscriptome Family F053528

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053528
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	93 residues
Representative Sequence	MKMDLKYESYIDLSPQHIAALRNLINALMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATMLLPENCE
Number of Associated Samples	82
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.25 %
% of genes near scaffold ends (potentially truncated)	33.33 %
% of genes from short scaffolds (< 2000 bps)	86.52 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.702 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (21.277 % of family members)
Environment Ontology (ENVO)	Unclassified (50.355 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.631 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.71% β-sheet: 24.19% Coil/Unstructured: 62.10%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF09948	DUF2182	8.51
PF04392	ABC_sub_bind	6.38
PF13467	RHH_4	4.96
PF13545	HTH_Crp_2	2.13
PF03572	Peptidase_S41	1.42
PF06823	DUF1236	1.42
PF00239	Resolvase	1.42
PF13546	DDE_5	1.42
PF13505	OMP_b-brl	1.42
PF04255	DUF433	0.71
PF03795	YCII	0.71
PF00816	Histone_HNS	0.71
PF13689	DUF4154	0.71
PF13180	PDZ_2	0.71
PF00027	cNMP_binding	0.71
PF04290	DctQ	0.71
PF12728	HTH_17	0.71
PF00589	Phage_integrase	0.71
PF13361	UvrD_C	0.71
PF00313	CSD	0.71
PF10011	DUF2254	0.71
PF13763	DUF4167	0.71
PF10030	DUF2272	0.71
PF07813	LTXXQ	0.71
PF01797	Y1_Tnp	0.71
PF13492	GAF_3	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	6.38
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	2.84
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	1.42
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.42
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.42
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.71
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.71
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.71
COG2916	DNA-binding protein H-NS	Transcription [K]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.70 %
Unclassified	root	N/A	38.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.70 %
Unclassified	root	N/A	38.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.70 %
Unclassified	root	N/A	38.30 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.43 %
Unclassified	root	N/A	38.30 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.30 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	32.62 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.30 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	11.35 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.35 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.30 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.09 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.96 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	4.26 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.30 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.09 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	4.26 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.55 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.30 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.09 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	4.26 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	0.71 %
Anaerostipes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Anaerostipes	0.71 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.30 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	7.09 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	4.26 %
Anaerostipes caccae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Anaerostipes → Anaerostipes caccae	0.71 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.71 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000579\|AP72_2010_repI_A01DRAFT_1044623	Not Available	643	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1027651	All Organisms → cellular organisms → Bacteria → Proteobacteria	892	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1051844	Not Available	631	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10020433	Not Available	1818	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10116074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	655	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1055774	All Organisms → cellular organisms → Bacteria → Proteobacteria	703	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10013838	Not Available	1944	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10039358	Not Available	1085	Open in IMG/M
3300000956\|JGI10216J12902_116698694	All Organisms → cellular organisms → Bacteria	1662	Open in IMG/M
3300000956\|JGI10216J12902_118733034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	831	Open in IMG/M
3300001867\|JGI12627J18819_10023994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2503	Open in IMG/M
3300004633\|Ga0066395_10306790	Not Available	870	Open in IMG/M
3300005172\|Ga0066683_10102089	Not Available	1741	Open in IMG/M
3300005332\|Ga0066388_100492228	Not Available	1863	Open in IMG/M
3300005332\|Ga0066388_100732251	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300005332\|Ga0066388_100998697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1401	Open in IMG/M
3300005332\|Ga0066388_101049620	All Organisms → cellular organisms → Bacteria → Proteobacteria	1372	Open in IMG/M
3300005332\|Ga0066388_101108073	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300005332\|Ga0066388_101368767	Not Available	1226	Open in IMG/M
3300005332\|Ga0066388_101736145	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300005332\|Ga0066388_103022365	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300005332\|Ga0066388_103621951	Not Available	788	Open in IMG/M
3300005332\|Ga0066388_104092401	Not Available	743	Open in IMG/M
3300005332\|Ga0066388_105029405	Not Available	672	Open in IMG/M
3300005332\|Ga0066388_107924233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Anaerostipes → Anaerostipes caccae	531	Open in IMG/M
3300005363\|Ga0008090_10021663	All Organisms → cellular organisms → Bacteria	2039	Open in IMG/M
3300005363\|Ga0008090_10133840	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300005437\|Ga0070710_10372293	Not Available	951	Open in IMG/M
3300005445\|Ga0070708_101323004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	673	Open in IMG/M
3300005468\|Ga0070707_100807441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	902	Open in IMG/M
3300005536\|Ga0070697_101826212	Not Available	544	Open in IMG/M
3300005713\|Ga0066905_100093530	All Organisms → cellular organisms → Bacteria → Proteobacteria	2018	Open in IMG/M
3300005713\|Ga0066905_100145603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1698	Open in IMG/M
3300005713\|Ga0066905_100255000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1350	Open in IMG/M
3300005713\|Ga0066905_100566007	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300005713\|Ga0066905_100781725	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300005713\|Ga0066905_101246888	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300005764\|Ga0066903_100445390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2160	Open in IMG/M
3300005764\|Ga0066903_100764290	All Organisms → cellular organisms → Bacteria	1719	Open in IMG/M
3300005764\|Ga0066903_101066837	All Organisms → cellular organisms → Bacteria	1485	Open in IMG/M
3300005764\|Ga0066903_101171125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1424	Open in IMG/M
3300005764\|Ga0066903_101815356	Not Available	1165	Open in IMG/M
3300005764\|Ga0066903_103341834	All Organisms → cellular organisms → Bacteria	866	Open in IMG/M
3300005764\|Ga0066903_107232752	Not Available	574	Open in IMG/M
3300005764\|Ga0066903_107624630	Not Available	558	Open in IMG/M
3300005937\|Ga0081455_10009890	All Organisms → cellular organisms → Bacteria	9759	Open in IMG/M
3300005937\|Ga0081455_10018769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6563	Open in IMG/M
3300006172\|Ga0075018_10213019	Not Available	921	Open in IMG/M
3300006797\|Ga0066659_10881211	Not Available	747	Open in IMG/M
3300006854\|Ga0075425_100067386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4026	Open in IMG/M
3300006871\|Ga0075434_100190397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2072	Open in IMG/M
3300006903\|Ga0075426_10124377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1854	Open in IMG/M
3300009094\|Ga0111539_10533598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1367	Open in IMG/M
3300009137\|Ga0066709_100929891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1269	Open in IMG/M
3300009162\|Ga0075423_12219226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	597	Open in IMG/M
3300009792\|Ga0126374_10858675	Not Available	699	Open in IMG/M
3300009792\|Ga0126374_11516286	Not Available	551	Open in IMG/M
3300009792\|Ga0126374_11725108	Not Available	521	Open in IMG/M
3300009792\|Ga0126374_11740926	Not Available	519	Open in IMG/M
3300010043\|Ga0126380_10193249	All Organisms → cellular organisms → Bacteria → Proteobacteria	1354	Open in IMG/M
3300010043\|Ga0126380_10378157	All Organisms → cellular organisms → Bacteria → Proteobacteria	1043	Open in IMG/M
3300010043\|Ga0126380_10390781	Not Available	1029	Open in IMG/M
3300010043\|Ga0126380_10455588	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300010043\|Ga0126380_11994929	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300010046\|Ga0126384_10720258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	886	Open in IMG/M
3300010046\|Ga0126384_11695216	Not Available	597	Open in IMG/M
3300010046\|Ga0126384_11835017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	576	Open in IMG/M
3300010047\|Ga0126382_10320702	All Organisms → cellular organisms → Bacteria	1173	Open in IMG/M
3300010047\|Ga0126382_10694389	Not Available	853	Open in IMG/M
3300010358\|Ga0126370_10335261	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300010360\|Ga0126372_10695339	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300010360\|Ga0126372_12195532	Not Available	601	Open in IMG/M
3300010361\|Ga0126378_11930229	Not Available	672	Open in IMG/M
3300010362\|Ga0126377_10190355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1958	Open in IMG/M
3300010362\|Ga0126377_10434303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1332	Open in IMG/M
3300010362\|Ga0126377_13043353	Not Available	541	Open in IMG/M
3300010366\|Ga0126379_11908340	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300010376\|Ga0126381_100973775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1223	Open in IMG/M
3300010376\|Ga0126381_101635492	Not Available	930	Open in IMG/M
3300010398\|Ga0126383_10767325	Not Available	1046	Open in IMG/M
3300010398\|Ga0126383_11750537	Not Available	710	Open in IMG/M
3300010398\|Ga0126383_13643922	Not Available	503	Open in IMG/M
3300010400\|Ga0134122_11973966	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300010863\|Ga0124850_1134722	Not Available	598	Open in IMG/M
3300012198\|Ga0137364_10400812	Not Available	1027	Open in IMG/M
3300012202\|Ga0137363_10094932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2253	Open in IMG/M
3300012202\|Ga0137363_10406086	Not Available	1135	Open in IMG/M
3300012205\|Ga0137362_10220102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1637	Open in IMG/M
3300012205\|Ga0137362_10726740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	853	Open in IMG/M
3300012206\|Ga0137380_10664629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	907	Open in IMG/M
3300012361\|Ga0137360_10090721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2316	Open in IMG/M
3300012361\|Ga0137360_10690330	Not Available	876	Open in IMG/M
3300012917\|Ga0137395_10438041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	938	Open in IMG/M
3300012951\|Ga0164300_11000921	Not Available	538	Open in IMG/M
3300012971\|Ga0126369_10100715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2614	Open in IMG/M
3300016294\|Ga0182041_10106215	All Organisms → cellular organisms → Bacteria	2075	Open in IMG/M
3300016294\|Ga0182041_10614066	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300016294\|Ga0182041_10695739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	901	Open in IMG/M
3300016294\|Ga0182041_11249725	Not Available	678	Open in IMG/M
3300016319\|Ga0182033_10506723	Not Available	1038	Open in IMG/M
3300016357\|Ga0182032_10363200	Not Available	1162	Open in IMG/M
3300016371\|Ga0182034_10723563	Not Available	848	Open in IMG/M
3300016404\|Ga0182037_10306629	All Organisms → cellular organisms → Bacteria → Proteobacteria	1278	Open in IMG/M
3300016404\|Ga0182037_10817247	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300021478\|Ga0210402_10884365	All Organisms → cellular organisms → Bacteria → Proteobacteria	820	Open in IMG/M
3300021560\|Ga0126371_10487450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1380	Open in IMG/M
3300021560\|Ga0126371_11227445	Not Available	885	Open in IMG/M
3300025910\|Ga0207684_10175706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1846	Open in IMG/M
3300025922\|Ga0207646_10857759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	807	Open in IMG/M
3300026551\|Ga0209648_10101858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2351	Open in IMG/M
3300027502\|Ga0209622_1004699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2161	Open in IMG/M
3300027548\|Ga0209523_1007181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1963	Open in IMG/M
3300031545\|Ga0318541_10108697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1496	Open in IMG/M
3300031573\|Ga0310915_10217864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1338	Open in IMG/M
3300031573\|Ga0310915_10345746	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300031573\|Ga0310915_10684541	Not Available	724	Open in IMG/M
3300031719\|Ga0306917_11198513	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300031744\|Ga0306918_10324116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1191	Open in IMG/M
3300031744\|Ga0306918_10949378	Not Available	669	Open in IMG/M
3300031747\|Ga0318502_10321368	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300031777\|Ga0318543_10382806	Not Available	630	Open in IMG/M
3300031793\|Ga0318548_10270812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	835	Open in IMG/M
3300031805\|Ga0318497_10422575	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300031879\|Ga0306919_10733296	Not Available	761	Open in IMG/M
3300031890\|Ga0306925_10212863	Not Available	2085	Open in IMG/M
3300031896\|Ga0318551_10808290	Not Available	545	Open in IMG/M
3300031910\|Ga0306923_10270034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1945	Open in IMG/M
3300031941\|Ga0310912_11175936	Not Available	584	Open in IMG/M
3300031942\|Ga0310916_10839882	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300031945\|Ga0310913_10641421	Not Available	752	Open in IMG/M
3300032001\|Ga0306922_10300547	All Organisms → cellular organisms → Bacteria → Proteobacteria	1724	Open in IMG/M
3300032035\|Ga0310911_10046847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2235	Open in IMG/M
3300032044\|Ga0318558_10427473	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300032051\|Ga0318532_10363216	Not Available	514	Open in IMG/M
3300032059\|Ga0318533_10187445	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1477	Open in IMG/M
3300032076\|Ga0306924_10301024	All Organisms → cellular organisms → Bacteria → Proteobacteria	1840	Open in IMG/M
3300032076\|Ga0306924_11069154	Not Available	881	Open in IMG/M
3300032261\|Ga0306920_100092124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4479	Open in IMG/M
3300032261\|Ga0306920_100118666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3929	Open in IMG/M
3300032261\|Ga0306920_103977285	Not Available	537	Open in IMG/M
3300033289\|Ga0310914_10018873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5308	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.04%
Host-Associated	Host-Associated	4.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.33%
Plants	Host-Associated → Plants	4.96%
Aquatic	Environmental → Aquatic	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.42%
Sediment	Environmental → Aquatic → Sediment	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.09%
Loam	Environmental → Terrestrial → Soil → Loam	26.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	21.99%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.55%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	19.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.67%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.26%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.13%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.42%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.42%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.42%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A01DRAFT_10446232	3300000579	Forest Soil	MKIDLWHESYIDLNQPQHIAALHNLINALMKSVGERGEFRIELGGAPHYGTYTVTKRGEMVEVRVTPLKKRLRKSRNTAKPQVIRDNNVAGKAPREPG
AF_2010_repII_A01DRAFT_10276512	3300000580	Forest Soil	MKMDLKYESYVNLSPQHIAALRNLINALMKSGGEHGEFRIELGGSLYYGTYMVTNEMVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATMVVPDNCE*
AF_2010_repII_A01DRAFT_10518443	3300000580	Forest Soil	MKIDLKYESYVDLPPQHIATLRDLINVSMKSGDHGEFRIELGGCLYYGTYMVNGDMVEVRVTPLIKPLRKRRGRAKP
AF_2010_repII_A1DRAFT_100204332	3300000597	Forest Soil	MKIDLKYESYVDLPPQHIATLRDLINVSMKSGDHGEFRIELGGCLYYGTYMVNGDMVEVRVTPLIKPLRKRRGRAKPQTSSRWSSATMLLPENCE*
AF_2010_repII_A1DRAFT_101160741	3300000597	Forest Soil	IAALRNLINAMMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQILSRWSSATMLLAEK*
AF_2010_repII_A100DRAFT_10557741	3300000655	Forest Soil	MKMDLKYESYVNLSPQHIAALRNLINALMKSGGEHGEFRIELGGSLYYGTYMVTNEMVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATMVVPDNC
AF_2010_repII_A001DRAFT_100138381	3300000793	Forest Soil	MKMDLKYESYVNLSPQHIAALRNLINALMKSGGEHGEFRIELGGSLYYGTYMVTNEMVEVRVTPLKKRLRKSRGTAKPQTSSRWSSA
AF_2010_repII_A001DRAFT_100393582	3300000793	Forest Soil	MKMDLKYESYIDLSPQHIAALRNLINAMMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQILSRWSSATMLLAEK*
JGI10216J12902_1166986943	3300000956	Soil	MKIDLKYESYVDLAPQHIASLRDLINASMKSSDHGEFRIELGGSLYYGTYMATGDMVEVRVTPLVKSLRKRRGTAKRQTSSRWSAATMVLPDNCE*
JGI10216J12902_1187330342	3300000956	Soil	MKMDLKYESYIDLNQPQLAALRNLINALMKSVGEHGEFRIELGGVLHYGTYMVIKPGETVEVRITPLEKRLRKRLSTAKPPTSSRWSSATMLLPENRE*
JGI12627J18819_100239944	3300001867	Forest Soil	MKMDLWYESDIDLNQPQHNAALRNLINALMKSVGEHGEFRIELGGALHYGTYTVTKPGEMVEVRVTPLKKRLRKSLNTAKPQVRAPLAGQLI*
Ga0066395_103067902	3300004633	Tropical Forest Soil	MDLKYESYIDLSPQHIAALRNLINAMMKSVGEHGEFRIELGGSLYYGTYMVTDEMVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATMLLPENCE*
Ga0066683_101020892	3300005172	Soil	KMDLKYESYIDLNQPQLAALRNLINSLMKSVGEHGEFRIELGGVLHYGTYMVTKPGAIVEVRVTPLKKRLRKSLSTAKPQSSSRWSSATMLLAENRE*
Ga0066388_1004922283	3300005332	Tropical Forest Soil	MKMDLKYESYIDLSPLHIAALRNLINALMKSVGEHGEFRIELGASLYYGTYMVTGEMVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATMLLPENCD*
Ga0066388_1007322512	3300005332	Tropical Forest Soil	MKMDLRYESYIDLSSQHVATLRNLINALMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRGTANSQTSSQWSSATMLLPENSE*
Ga0066388_1009986972	3300005332	Tropical Forest Soil	MKIDLKYESYVDLPPQHIATLRDLIKASIKSGDHGEFRIELGGSLYYGTYMVTDEMVEARVTPLVKRLRKRRGTAKPQTSSRWSSATMSLPEKIR*
Ga0066388_1010496203	3300005332	Tropical Forest Soil	MKIDLKYESYVDLPPQHIATLRDLINVSMKSGDHGEFRIELGGSLYYGTYTVTGDMVEVRVTPLVKPLRKRRGRAKPQTSSRWSSATMLLPENCE*
Ga0066388_1011080731	3300005332	Tropical Forest Soil	MKMELKYESFVDLSQQHIAALRDLINVLMKSVGERGEFRIELGGSLYYGTYTVTGEMVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATML
Ga0066388_1013687672	3300005332	Tropical Forest Soil	MKMDLKYESYIDLSPQHIAALRNLINAMMKSVREHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMVKPQILSRWSSATMLLAEK*
Ga0066388_1017361453	3300005332	Tropical Forest Soil	MKMDLWCESYIDLTQPQHNAALRSLINALMKSVGERGEFRIELGGALHYGTYTVTEPGETVEVRVTALKKRLRKSLNTATPQVIDDNTGVGKS*
Ga0066388_1030223651	3300005332	Tropical Forest Soil	WLNMSRRSDMKMDLKYESYIDLSPQHIAALRNLINAMMKSVGEHGEFRIELGGSLYYGTYMTTGETVEVRVTPLKKRLRKSRGMAKPQTSSRWSSATMLLPENCE*
Ga0066388_1036219511	3300005332	Tropical Forest Soil	MKMDLKYESFVDLSPQHIAALRNLINALMKSVGEHGEFRIELGASLYYGTYMVTGERVEVRVTPLKKRLRKRQGTAKPQTSSRWSSATMLLPDNCE*
Ga0066388_1040924011	3300005332	Tropical Forest Soil	MKMDLKYESYLSPQHIAAVRNLINASMKSSDHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLVKRSRKRRGTAKPRTSSRWSSATMLLPGTCE*
Ga0066388_1050294051	3300005332	Tropical Forest Soil	MKMDLKYESHIDLNQPQLAALRNLINSLMQSVGEHGEFRIELGGVLHYGTYMVTKPGEIVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATMLLPNNCR*
Ga0066388_1079242331	3300005332	Tropical Forest Soil	MCRPSDMKMDLKYESYVDLSPQHIVALRNLINALMKSVGEHGEFRIELGGSLYYGTYLVTGEMVEVRVTPLKKRLRKSRGGAKAQTSSRWSSATMLLPEN*
Ga0008090_100216631	3300005363	Tropical Rainforest Soil	MRRRSDMKMDLKYESYIDLSPQHIAALRNLVNALMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRGMAKPQSSSRWSSATMLLAENCE*
Ga0008090_101338402	3300005363	Tropical Rainforest Soil	MKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQSSSRWSSATMLLAENCE*
Ga0070710_103722933	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MNMDLWCESDIDLTQPQHNAALRSLINALMKSVGERGEFRFELGGAVHYGTYTVIEPGDMVEVRVTALKKRLRKSLNTATPQVIGDDTGVGKS*
Ga0070708_1013230041	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDLWYESYIDLNQPQHNAALRNLINVLMKSVGEHGEFRIELGGALHYGTYTVTKPGEMVEVRVTPLKKRLRKSLNTAKPQFIRDNIVAGKAHREP*
Ga0070707_1008074412	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MDLWYESYIDLNQPQHNAALRNLINVLMKSIGEHGEFRIELGGALHYGTYTVAKPGEMVEVRVTPLKKRLRKSLNTA*
Ga0070697_1018262121	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKMDLWYESYIDLNQPQHNAALRNLINVLMKSVGEHGEFRIELGGALHYGTYTVTKPGEMVEVRVTPLKKRLRKSLNTAKPQFIRDNIVAGKAHREP*
Ga0066905_1000935301	3300005713	Tropical Forest Soil	MKIDLWHESYIDLNQPQHIAALHNLINALMKSVGERGEFRIELGGAPHYGTYTVTKRGEMVEVRVTPLKKRLRKSRNTAKPQ
Ga0066905_1001456031	3300005713	Tropical Forest Soil	KIDLKYESYVDLPPQHIATLRDLINASLKSGDHGEFRIELGGSLYYRTYMVTGEMVEVRVTPLVKRLRKRRGTAKPQTSSRWSSSTMSLPEN*
Ga0066905_1002550002	3300005713	Tropical Forest Soil	MKMDLKYESYIDLSPQQIAALRNLINALMKSVGGHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRGVAKPQTSSRWSSATMLLPENCE*
Ga0066905_1005660071	3300005713	Tropical Forest Soil	MKIDLKYESYVDLPPHHIATLRDLIKASIKSGDHGEFRIELGGSLYYGTYMVTDEMVEARVTPLVKRLRKRRGTAKPQTSSRWSSATMSLPEKIR
Ga0066905_1007817251	3300005713	Tropical Forest Soil	KYESFVDLSPQHIAALRNLINALIKSVGEHGEFRIELGASLYYGTYMVTGERVEVRVTPLKKRLRKRQGTAKPQTSSRWSSATMLLPDNCE*
Ga0066905_1012468881	3300005713	Tropical Forest Soil	DLSPQHIAALRNLINALMKSVGEHGEFRIELGGSLYYGTYRVTDEMVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATMLLPDNCE*
Ga0066903_1004453902	3300005764	Tropical Forest Soil	MDLKYESHIDLNQPQLAALRNLINSLMQGVGEHGEFRIELGGVLHYGTYMVTKPGEIVEVRVTPLKKRLRKSLSTAKPQSSSRWSSATMLLPDNCE*
Ga0066903_1007642902	3300005764	Tropical Forest Soil	MKMDLKYESYVDLSPQHIAALRNLINALMKSVGEHGEFRIELGASLYYGTYMVTGERVEVRVTPLKKQLRKRQGTAQPQTSSRWSSATMLLPDNCE*
Ga0066903_1010668373	3300005764	Tropical Forest Soil	MKMELKYESFVDLSQQHIAALRDLINFLMKSVGERGEFRIELGGSLYYGTYTVTGEMVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATMLPDNCE*
Ga0066903_1011711253	3300005764	Tropical Forest Soil	MKMDLWYESYIDLNQPQHNAVLRNLVNVLMKSVGEHGEFRIELGGALHYGTYTVTKPGEMVEVRVTPLKKRLRKSLNTAQPQVIRDNIVAGKS*
Ga0066903_1018153562	3300005764	Tropical Forest Soil	MKMNLKYESSADLSPQHIAALRNLINALMKSVGEHGEFRIELGGSLYYGTYMVTDEMVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATMLLPENCE*
Ga0066903_1033418342	3300005764	Tropical Forest Soil	MKLDLKYESYVDLSPQHIAALRNLISAMMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATMLLPENCE*
Ga0066903_1072327522	3300005764	Tropical Forest Soil	MKMDLKYESYIDLSPQHIAALRNLINAMMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQILSRWSSATM
Ga0066903_1076246302	3300005764	Tropical Forest Soil	MCRPSDMKMDLKYESYIDLLPQHIVALRNLINALMKSVGEHGEFRIELGGSLYYGTYLVTGEMVEVRVTPLKKRLRKSRGAAKAQTSSRWSSATMLLPEN*
Ga0081455_1000989015	3300005937	Tabebuia Heterophylla Rhizosphere	MSRRSDMKMDLKYESYIDLSPQHIAALRNLINAMMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRGMAKPQTLSRWSSATMLLPENCE*
Ga0081455_100187695	3300005937	Tabebuia Heterophylla Rhizosphere	MKMDLKYESYIDLNQPQLAALRNLINALMKSVGEHGEFRIELGGVLHYGTYMVIKPGEIVEVRVTPLKKRLRKSLSTAKPQTSSRWSSATMLLPENRE*
Ga0075018_102130192	3300006172	Watersheds	MSRRSDMKMDLKYESYIDLSPQHIAALRNLINALMKSVGEHGEFRIELGGSLYYGTYTVTGEMVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATMLLPENCE*
Ga0066659_108812112	3300006797	Soil	MKMDLWYESYIDLNQPQHNAALRNLINVLMKSVGEHGEFRIELGGALHYGTYTVTKPGEMVEVRVTPLKKRLRKSLNTSKPQFIRDNIVSGKAHREP*
Ga0075425_1000673863	3300006854	Populus Rhizosphere	MDLKYESYIDLSPQHIAALRNLINAMMKSVGEHGEFRMELGGSLYYGTYLVAGEMVEVRVTPLKKRLRKSRNMAKPQSSSRWSSATMLLPEL*
Ga0075434_1001903972	3300006871	Populus Rhizosphere	MKMDLKYESYIDLSPQHIAALRNLINAMMKSVGEHGEFRMELGGSLYYGTYLVAGEMVEVRVTPLKKRLRKSRNMAKPQSSSRWSSATMLLPEL*
Ga0075426_101243773	3300006903	Populus Rhizosphere	MKMDLKYESYIDLSPQHIAALRNLINAMMKSVGEHGEFRMELGGSLFYGTYLVAGEMVEVRITPLKKRLRKSRNMAKPQSSSRWSSATMLLPEL*
Ga0111539_105335982	3300009094	Populus Rhizosphere	MKMDLKYESYIDLSPQHIAALRNLINAMMKSVGEHGEFRMELGGSLYYGTYLVAGEMVEVRVTPLKKRLRKSRNMAKPQSSSRWSSATMLLPETCDRIGVLPKHQRR*
Ga0066709_1009298912	3300009137	Grasslands Soil	MKLDLKYESYIDLNQPQLAALRNLINSLMKSVGEHGEFRIELGGVLHYGTYMVTKPGAIVEVRVTPLKKRLRKSLSTAKPQSSSRWSSATMLLAENRE*
Ga0075423_122192261	3300009162	Populus Rhizosphere	MKMDLKYESYIDLSPQHIAALRNLINAMMKSVGEHGEFRMELGGSLFYGTYLVAGEMVEVRVTPLKKRLRKSRNMAKPQSSSRWSSATMLLQEL*
Ga0126374_108586752	3300009792	Tropical Forest Soil	MKMELKYESYVDLSPQHIAALRDLINVLMKSVGERGEFRIELGGSLYYGTYTVTGEMVEVRVTPLKKRLRKSRGTAKPQ
Ga0126374_115162861	3300009792	Tropical Forest Soil	MKMDLKYESHLDLSPQHIAALRNLINALMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMVKPQILSRWSSATMLLAEK*
Ga0126374_117251082	3300009792	Tropical Forest Soil	MKMDLKYESYIDLNQPQHIAAPRNLINALMKSVGEHGEFRIELGGVLHCGTYMVAKPGEMVEVQVARLKKRLRKSPTTANTSSCSPR
Ga0126374_117409261	3300009792	Tropical Forest Soil	MSRWSDMKMDLKYESYVDLSPQHIAALRNLIHALMKSVGEHGEFRIELGASLYYGTYMVTGERVEVRVTPLKKRLRKRQGTAQPQTSSRWSSATMLLPDNCE*
Ga0126380_101932491	3300010043	Tropical Forest Soil	MKIDLWCESYIDLNQPQHIASLRNLINALMKSVGERGEFRIELGGAPHYGTYTVTKPGETVEVRVTPLKKRLRKSLNTAKPQVIRDNNVA
Ga0126380_103781572	3300010043	Tropical Forest Soil	MKMDLKYESYIDLSPQHIAALRNLINAMMKSVGEHGEFRIELGGSLYYGTYMATGEMVEVRVTPLKKRLRKSRGMAKSQTSSRWSSATMLLPENCE*
Ga0126380_103907812	3300010043	Tropical Forest Soil	MKMELKYESYVDLSQQHIAALRDLINVLMKSVGERGEFRIELGGSLYYGTYMVTDETVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATMLLPENCE*
Ga0126380_104555882	3300010043	Tropical Forest Soil	MKIDLTYESYVDLPPHHIATLRDLIKASIKSGDHGEFRIELGGSLYYGTYMVTDEMVEARVTPLVKRLRKRRGTAKPQTSSRWSSATMSLPEKIR*
Ga0126380_119949292	3300010043	Tropical Forest Soil	WCESYIDLTQPQHNAALRSLINALMKSVGERGEFRIELGGALHYGTYTVTEPGETVEVRVTALKKRLRKSLNTATPQVIDDNTGVGKS*
Ga0126384_107202581	3300010046	Tropical Forest Soil	MKMDLKYESYADLSPQHIAALHNLINVLMKSVGEHGEFRIELGGSPYYGTYMVTGEMVEVRVTPLKKRLRKSRGMAKPQSSNRWSSATMLLAENCE*
Ga0126384_116952162	3300010046	Tropical Forest Soil	MKIDLKYESYVDLPPQHIATLRDLINASMKSSDHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLVKRSRKRRGTAKPQTSSWWSSATMSLPENYK*
Ga0126384_118350171	3300010046	Tropical Forest Soil	SPQYIAALRDLINALMKSVGEHGEFRIELGGSLYYGTYRVTDEMVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATMLLPENCE*
Ga0126382_103207021	3300010047	Tropical Forest Soil	MKIDLKYESYVDLPPHHIATLRDLIKASVKSGDHGEFRIELGGSLYYGTYMVTDEMVEARVTPLVKRLRKRRGTAKPQTSSRWSSATMSLPEKIR*
Ga0126382_106943891	3300010047	Tropical Forest Soil	MKMDLKYESYIDLLPQHIVALRNLINALMKSVGEHGEFRIELGGSLYYGTYLVTGEMVEVRVTPLKKRLRKSRGAAKAQTSSRWPSATMLLPYN*
Ga0126370_103352611	3300010358	Tropical Forest Soil	MKMDLKYESSIDLSPQHIAALHNLINVLMKSVGEHGEFRIELGGSLYYGTYRVTDEMVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATMLLPDNCE*
Ga0126372_106953391	3300010360	Tropical Forest Soil	MRRWSDMKMELKYESFVDLSQQHIAALRDLINVLMKSVGERGEFRIELGGSLYYGTYTVTGEMVEVRVTPLKKRLRKSRGTAKPQTSSRWSSVTTLPDN*
Ga0126372_121955322	3300010360	Tropical Forest Soil	MKMDLKYESYIDLSPQHIAALRNLINAMMKSVREHGEFRIELGGSLYYGTYMATGETVEVRVTPLKKRLRKSRGMAKPQTSSRWSSATM
Ga0126378_119302291	3300010361	Tropical Forest Soil	AMMKSVGEHGEFRTGIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMVKPQILSRWSSATMLLAEK*
Ga0126377_101903551	3300010362	Tropical Forest Soil	MKIDLWHESYIDLNQPQHIAALHNLINALMKSVGERGEFRIELGGALHYGTYTVTEPGETVEVRVTALKKRLRKSLNTATPQVIDDNTGVGKS*
Ga0126377_104343033	3300010362	Tropical Forest Soil	MKMDLKYESYIALSPQHIAALRNLINALMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATMLLPENCD*
Ga0126377_130433531	3300010362	Tropical Forest Soil	ADLSPQHIAALGNLINAMMKSVGEHGEFRIELGGSLYYGTYMVTDETVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATMLLPDNCE*
Ga0126379_119083402	3300010366	Tropical Forest Soil	MKIDLKYESYVDLPPQHIATLRDLIKASIKSGDHGEFRIELGGSLYYGTYMVTDEMVEARVTPLVKRLRKRRGTAKPQTSSRWSSATMSLPEKIR
Ga0126381_1009737753	3300010376	Tropical Forest Soil	MKMDLKYESHLDLSPQHIAALRNLINAMMKSVGEHGEFRIELGGSLYYGTYMATGEMVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATMLLPDNCE*
Ga0126381_1016354922	3300010376	Tropical Forest Soil	MKMDLKYESYIDLSPQHIAALRNLINAMMKSVREHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQILSRWSSATMLLAEK*
Ga0126383_107673252	3300010398	Tropical Forest Soil	MKIDLKYESYVDLPPQHIATLRDLINVSMKSGDHGEFRIELGGCLYYGTYMVTGDMVEVRVTPLIKPLRKRRGRAKPQTSSRWSSATMLLPENCE*
Ga0126383_117505371	3300010398	Tropical Forest Soil	DMKIDLKYESYVDLPPQHIATLRDLINASMKSSDHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLVKRSRKRRGTAKPQTSSWWSSATMSLPENYK*
Ga0126383_136439221	3300010398	Tropical Forest Soil	MKMDLKYESYADLSPQHIAALHNLINVLMKSVGEHGEFRIELGGSLYYGTYRVTDEMVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATMLLPDNCE*
Ga0134122_119739662	3300010400	Terrestrial Soil	MKIDLWYESYIDLAQPQHNAPLRSLINALMKSVGERGEFRIELGGALHYGTYTVTKPGETVEVRVTPLKKRSRKSLNTA
Ga0124850_11347221	3300010863	Tropical Forest Soil	MKMELKYESFVDLSQQHIAALRDLINVLMKSVGERGEFRTELGGSLYYGTYTVTGEMVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATMLLPDNCE*
Ga0137364_104008122	3300012198	Vadose Zone Soil	MKMDLKYESYIDLNQPQLAALRNLINSLMKSVGEHGEFRIELGGVLHYGTYMVTKPGAIVEVRVTPLKKRLRKSLSTAKPQSSSRWSSATMLLAENRE*
Ga0137363_100949322	3300012202	Vadose Zone Soil	VAEFLVVETRAGNETTMKMDLWYESYIDLNQPQHNAALRNLINVLMKSVGEHGEFRIELGGALHYGTYTVTKPGEMVEVRVTPLKKRLRKSVNTAKPQVIRDNIVAGKS*
Ga0137363_104060861	3300012202	Vadose Zone Soil	MKMDLKYESYIDLSPQHIAALRNLINALMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATMLLPENCE*
Ga0137362_102201024	3300012205	Vadose Zone Soil	MKMDLKCESYIDLSPQHIATLRNLINALMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKWLRKSRGTAKPQTSTRWSSATMLLPENCE*
Ga0137362_107267401	3300012205	Vadose Zone Soil	VAEFLVVETRAGNETTMKMDLWYESYIDLNQPQHNAALRNLINVLMKSVGEHGEFRIELGGALHYGTYTVTKPGEMVEVRVTPLKKRLRKSLNTAKPQFIRDNIVAGKAHQEP*
Ga0137380_106646291	3300012206	Vadose Zone Soil	MKMDLWYESYIDLNQPQHNAALRNLINTLMKSVGEHGEFRIELGGALHYGTYTVTKPGEMVEVRVTPLKKRLRKSLNTAKPQFIRDNIVAGKAHREP*
Ga0137360_100907212	3300012361	Vadose Zone Soil	MKMDLKYESYIDLSPQHIAALRNLINALMKSVGEHGEFRIELGGSLYYGTYTVTGEMVEVRVTPLKKRLRKSRGTAKPQTSTRWSSATMLLPENCE*
Ga0137360_106903302	3300012361	Vadose Zone Soil	MKMDLWYESYIDLNQPQHNAALRNLINVLMNSVGEHGEFRIELGGALHYGTYTVTKPGEMVEVRVTPLKKRLRKSLNTAKPQFIRDNIVAGKAHREP*
Ga0137395_104380412	3300012917	Vadose Zone Soil	MKMDLWYESYIDLNQPQHNAALRNLINALMKSVGEHGEFRIELGGALHYGTYTVTKPGEMVEVRVTPLKKRLRKSLNTAKPQFIRDNIVAGKAHQEP*
Ga0164300_110009211	3300012951	Soil	MNMDLWCESDIDLTQPQHNAALRLINALMKSVGERGEFRFELGGAVHYGTYTVIEPGDMVEVRVTALKKRLRKSLNTATPQVIGDDTGVGKS*
Ga0126369_101007151	3300012971	Tropical Forest Soil	PQHIAALRNLVNALMKSVGEHGEFRIELGGSLYYGTYRVTDEMVEVRVTPLKKRLRKSRGTAKPQTSSRWSSATMLLPDNCE*
Ga0182041_101062154	3300016294	Soil	WPDMKMELKYESYVDLSTQHIAALRDLINVLMKSVGERGEFRIELGGSLYYGTYMVTDETVEVRVTPLKKRLRKSRGTAKTQTSSRWSSATMLLPDKL
Ga0182041_106140661	3300016294	Soil	MDLWYESHVDLNQPQHNAALRNLVNVLMKRVGEHGEFRIELGGALHYGTYTVTKPGEMVEVRVTPLKKRLRKSLNTAQPQVIRDNIVAGKS
Ga0182041_106957391	3300016294	Soil	MSRRSDMKMDLKYESYIDLSPQHIAALRNIINAMMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQILSRWSSATMLLAEK
Ga0182041_112497252	3300016294	Soil	ALGNLINALMKSVGEHGEFRIELGNSLCYGTYMVTNEMVEVRVTPLKKRLRKSRNMAKPQSSSRWSSATMLLPENCE
Ga0182033_105067232	3300016319	Soil	MKMDLKYESYIDLSPQHIAALRNLINAMMKSVGEHGEFRIELGGSLYYSTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQILSRWSSATMLLAEK
Ga0182032_103632002	3300016357	Soil	MKMDLKYESYIDLSPQHIAALRNIINAMMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQILSRWSSATMLLAEK
Ga0182034_107235632	3300016371	Soil	MKMDLKYESYIDLSPQHIAALRNLINAMMKSVGEHGEFRIELGGSLYYGTYMVTGEIVEARVTPLKKRLRKSRNMAKPQILSRWSSATMLLAEK
Ga0182037_103066292	3300016404	Soil	MDLKYESYIDLSPQHIAALRNLINAMMKSVGEHGEFRIELGGSLYYGTYMATGEMVEVRVTPLKKRLRKSRNMAKPQILSRWSSATMLLAEK
Ga0182037_108172471	3300016404	Soil	ETTMKMDLWYESYIDLNQPQHNAALRNLVNVLMKRVGEHGEFRIELGGALHYGTYTVTKPGEMVEVRVTPLKKRLRKSLNTAQPQVIRDNIVAGKS
Ga0210402_108843652	3300021478	Soil	MRLTMKMDLWYESFIDLTQPQHNAALRSLINALMKSVGEHGEFRIELGGALHYGTYTVTKPGETVEVRVTPLKKRLRKSLNTAKPQV
Ga0126371_104874502	3300021560	Tropical Forest Soil	MDLKYESYADLSPQHIAALHNLINVLMKSVGEHGEFRIELGGSLYYGTYMVTDEMVEVRVTPLRKRLRKSRGTAKPQTSSRWSSATMLLPDNCE
Ga0126371_112274451	3300021560	Tropical Forest Soil	MKMDLKYESYIDLSPQHIAALRNLVNALMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRGMAKPQSSSRWSSATMLLAENCE
Ga0207684_101757061	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MKMDLWYESYIDLNQPQHNAALRNLINALMKSVGEHGEFRIELGGALHYGTYTVTKPGEMVEVRVTPLKKRLRKSLNTAKPQFIRDNIVA
Ga0207646_108577591	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MKMDLWYESYIDLNQPQHNAALRNLINVLMKSIGEHGEFRIELGGALHYGTYTVAKPGEMVEVRVTPLKKRLRKSLNTA
Ga0209648_101018582	3300026551	Grasslands Soil	MKMDLWYESYIDLNQPQHNAALRNLINVLMKSVGEHGEFRIELGGALHYGTYTVTKPGEMVEVRVTPLKKRLRKSLNTAKPQVIRDNIVAGKS
Ga0209622_10046992	3300027502	Forest Soil	MKMDLWYESDIDLNQPQHNAALRNLINALMKSVGEHGEFRIELGGALHYGTYTVTKPGEMVEVRVTPLKKRLRKSLNTAKPQVRAPLAGQLI
Ga0209523_10071813	3300027548	Forest Soil	MKIDLWYESYIDLAQPQHNAPLRSLINALMKSVGEHGEFRIELGGALHYGTYTVTKPGEMVEVRVTPLKKRLRKSLNTAKPQVRAPLAGQLI
Ga0318541_101086972	3300031545	Soil	MKMDLWYESYIDLNQPQHNAVLRNLVNVLMKSVGEHGEFRIELGGALHYGTYTVTKPGEMVEVRVTPLKKRLRKSLNTAQPQVIRDNIVAGKS
Ga0310915_102178642	3300031573	Soil	VPQRIIWGRTVSLLKYESYVNLSPQLIAALRNLINALMKSGAKHGEFRIELGGSLYYGTYMVTNEMVEVRVTSLKKRLRKSRDAAKPQTSSRWSSATMVLLDNCE
Ga0310915_103457461	3300031573	Soil	MKMDLWYESYIDLNQPQHNAALRNLVNVLMKRVGEHGEFRIELGGALHYGTYTVTKPGEMVEVRVTPLKKRLRKSLNTAQPQVIRDNIVAGKS
Ga0310915_106845411	3300031573	Soil	MKMDLKYESYIDLSPQHIAALRNIINAMMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQSSSRWSSATMLLPENCE
Ga0306917_111985132	3300031719	Soil	NLINALMKSGAKHGEFRIELGGSLYYGTYMVTNEMVEVRVTSLKKRLRKSRDAAKPQTSSRWSSATMVLLDNCE
Ga0306918_103241161	3300031744	Soil	MSRRSDMKMDLKYESYIDLSPQHIAALRNIINAMMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQSSSRWSSATMLLPENCE
Ga0306918_109493781	3300031744	Soil	MKMDLKYESYIDLSPQHIAALRSLINAMMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQILSRWSSATMLLAEK
Ga0318502_103213682	3300031747	Soil	MDLKYESYIDLSPQHIAALRSLINAMMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQSSSRWSSATMLLPDKL
Ga0318543_103828061	3300031777	Soil	MKMDLWYESYIDLNQPQHNAVLRNLVNVLMKSVGERGEFRIELGGALHYGTYTVTKPGEMVEVRVTPLKKRLRKSLNTAQPQVIRDNIVAGKS
Ga0318548_102708121	3300031793	Soil	MKMDLKYESYIDLSPQHIAALRNLINAMMKSVGEHGEFRIELGGSLYYGTYMVTNEMVEVRVTSLKKRLRKSRDAAKPQTSSRWSSATMVLLDNCE
Ga0318497_104225751	3300031805	Soil	SDMKMDLKYESYIDLSPQHIAALRNIINAMMKSVGEHGEFRIELGGSLYYGTYMVTDETVEVRVTPLKKRLRKSRGTAKTQTSSRWSSATMLLPDKL
Ga0306919_107332962	3300031879	Soil	MKMDLKYESYIDLSPQHIAALRSLINAMMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQSSSRWSSATMLLPENCE
Ga0306925_102128632	3300031890	Soil	MDLKYESYIDLSPQHIAALRNIINAMMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQSSSRWSSATMLLPENCE
Ga0318551_108082901	3300031896	Soil	MKMDLWYESYIDLNQPQHNAVLRNLVNVLMKSVGEHGEFRIELGGALHYGTYTVTKPGEMVEVRVTPLKKRLRKSLNTAQPQVIRD
Ga0306923_102700341	3300031910	Soil	MKMDLKYESYIDLSPQHIAALRNIINAMMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQSSSRWSSATMLLAENCE
Ga0310912_111759361	3300031941	Soil	MKMDLKYESYIDLSPQHIAALRNLINAMMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQSSSR
Ga0310916_108398821	3300031942	Soil	LWYESYIDLNQPQHNAALRNLVNVLMKRVGEHGEFRIELGGALHYGTYTVTKPGEMVEVRVTPLKKRLRKSLNTAQPQVIRDNIVAGKS
Ga0310913_106414212	3300031945	Soil	MKMDLKYESYIDLSPQHIAALRNLINAMMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQILSRWSSATMLLAEK
Ga0306922_103005471	3300032001	Soil	VPQRIIWGRTVSLLKYESYVNLSPQLIAALRNLINALMKSGAKHGEFRIELGGSLYYGKYMVTNEMVEVRVTSLKKRLRKSRDAAKPQTSSRWSSATMVL
Ga0310911_100468471	3300032035	Soil	QHIAALRDLINVLMKSVGERGEFRIELGGSLYYGTYMVTDETVEVRVTPLKKRLRKSRGTAKTQTSSRWSSATMLLPDKL
Ga0318558_104274732	3300032044	Soil	LIAALRNLINALMKSGAKHGEFRIELGGSLYYGTYMVTDETVEVRVTPLKKRLRKSRGTAKTQTSSRWSSATMLLPDKL
Ga0318532_103632163	3300032051	Soil	LINAMMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQILSRWSSATMLLAEK
Ga0318533_101874451	3300032059	Soil	ALRSLINAMMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQILSRWSSATMLLAEK
Ga0306924_103010243	3300032076	Soil	LKYESYVNLSPQLIAALRNLINALMKSGAKHGEFRIELGGSLYYGTYMVTNEMVEVRVTSLKKRLRKSRDAAKPQTSSRWSSATMVLLDNCE
Ga0306924_110691541	3300032076	Soil	MKMDLKYESYIDLSPQHIAALRSLINAMMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQILSRW
Ga0306920_1000921242	3300032261	Soil	MDLKYESYIDLSPQHIAALRNLINAMMKSVGEHGEFRIELGGSLYYSTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQILSRWSSATMLLAEK
Ga0306920_1001186661	3300032261	Soil	ESYIDLSPQHIAALRNIINAMMKSVGEHGEFRIELGGSLYYGTYMVTGEMVEVRVTPLKKRLRKSRNMAKPQSSSRWSSATMLLPENCE
Ga0306920_1039772851	3300032261	Soil	HMSRWSDMKMDLKYESYVDLSPQHIAALRNLINALMKSVGEHGEFRIELGGSLYYGTYMVTDEMVEVRVTPLKKRLRKSRGAAKPQTSSHWSSATMLLPDNCE
Ga0310914_100188731	3300033289	Soil	MKMDLKYESYIDLSPQHIAALRNLINAMMKSVGEHGEFRIELGGSLYYGTYMVTDETVEVRVTPLKKRLRKSRGTAKTQTSSRWSSATMLLPDKL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053528

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences