Metagenome / Metatranscriptome Family F053532

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053532
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	93 residues
Representative Sequence	MKTVLTKTLVLIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVGLALVWTLFGGVKGFARIGDDEREGHELLVVHHSGEARRHAFLHTRGLS
Number of Associated Samples	79
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.91 %
% of genes near scaffold ends (potentially truncated)	37.59 %
% of genes from short scaffolds (< 2000 bps)	88.65 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.376 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (15.603 % of family members)
Environment Ontology (ENVO)	Unclassified (30.496 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.645 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.03% β-sheet: 0.00% Coil/Unstructured: 47.97%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF04964	Flp_Fap	21.99
PF02163	Peptidase_M50	4.96
PF01478	Peptidase_A24	4.96
PF16976	RcpC	1.42
PF02954	HTH_8	1.42
PF13676	TIR_2	0.71
PF01145	Band_7	0.71
PF08666	SAF	0.71
PF04977	DivIC	0.71
PF00378	ECH_1	0.71
PF07811	TadE	0.71
PF00459	Inositol_P	0.71
PF00160	Pro_isomerase	0.71
PF01467	CTP_transf_like	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	21.99
COG0652	Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG2919	Cell division protein FtsB	Cell cycle control, cell division, chromosome partitioning [D]	0.71
COG4839	Cell division protein FtsL	Cell cycle control, cell division, chromosome partitioning [D]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.38 %
Unclassified	root	N/A	32.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.38 %
Unclassified	root	N/A	32.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.38 %
Unclassified	root	N/A	32.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.62 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	19.86 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.35 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.13 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.62 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	11.35 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	9.22 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	3.55 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.13 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.35 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	7.80 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	3.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.13 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.71 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.35 %
Marinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae	6.38 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	3.55 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.13 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	1.42 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.71 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.35 %
Marinobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter	6.38 %
Pyrinomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas	3.55 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.42 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	1.42 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.71 %
Dietziaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Dietziaceae	0.71 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.35 %
Marinobacter lipolyticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter lipolyticus	6.38 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3.55 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1.42 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	1.42 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.71 %
Dietzia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Dietziaceae → Dietzia	0.71 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.35 %
Marinobacter lipolyticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter lipolyticus	6.38 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3.55 %
Nocardia nova	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia nova	1.42 %
Pseudomonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp.	0.71 %
unclassified Dietzia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Dietziaceae → Dietzia → unclassified Dietzia	0.71 %
Pseudomonas sp. PA14H7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PA14H7	0.71 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.71 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11.35 %
Marinobacter lipolyticus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter lipolyticus	6.38 %
Pyrinomonas methylaliphatogenes	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	3.55 %
Nocardia nova	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia nova	1.42 %
Dietzia sp. UCD-THP	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Dietziaceae → Dietzia → unclassified Dietzia → Dietzia sp. UCD-THP	0.71 %
Pseudomonas sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp.	0.71 %
Pseudomonas sp. PA14H7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PA14H7	0.71 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	0.71 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002915\|JGI25387J43893_1034521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300003321\|soilH1_10260618	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300003570\|Ga0007418J51697_1060867	Not Available	544	Open in IMG/M
3300003575\|Ga0007409J51694_1063159	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300005171\|Ga0066677_10480714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300005179\|Ga0066684_10922108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia nova	569	Open in IMG/M
3300005184\|Ga0066671_10201810	All Organisms → cellular organisms → Bacteria	1196	Open in IMG/M
3300005184\|Ga0066671_10648286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300005331\|Ga0070670_100550643	All Organisms → cellular organisms → Bacteria → Proteobacteria	1029	Open in IMG/M
3300005506\|Ga0068912_10931492	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300005575\|Ga0066702_10604138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300005576\|Ga0066708_10971458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300005587\|Ga0066654_10423820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300006032\|Ga0066696_10307255	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300006032\|Ga0066696_10667885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia nova	670	Open in IMG/M
3300006169\|Ga0082029_1489585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	678	Open in IMG/M
3300006169\|Ga0082029_1509335	All Organisms → cellular organisms → Bacteria → Proteobacteria	518	Open in IMG/M
3300006794\|Ga0066658_10533904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Dietziaceae → Dietzia → unclassified Dietzia → Dietzia sp. UCD-THP	638	Open in IMG/M
3300007790\|Ga0105679_10239611	All Organisms → cellular organisms → Bacteria	1799	Open in IMG/M
3300007790\|Ga0105679_10251425	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300009789\|Ga0126307_10995172	Not Available	677	Open in IMG/M
3300009789\|Ga0126307_11025125	Not Available	667	Open in IMG/M
3300009840\|Ga0126313_11027453	Not Available	676	Open in IMG/M
3300009840\|Ga0126313_11461890	Not Available	567	Open in IMG/M
3300010036\|Ga0126305_10015513	All Organisms → cellular organisms → Bacteria	3915	Open in IMG/M
3300010036\|Ga0126305_11249007	Not Available	513	Open in IMG/M
3300010037\|Ga0126304_10125276	All Organisms → cellular organisms → Bacteria	1644	Open in IMG/M
3300010037\|Ga0126304_10361896	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300010037\|Ga0126304_10469306	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300010040\|Ga0126308_10492625	All Organisms → cellular organisms → Bacteria → Acidobacteria	827	Open in IMG/M
3300010041\|Ga0126312_11046668	Not Available	598	Open in IMG/M
3300010042\|Ga0126314_11211566	Not Available	564	Open in IMG/M
3300010044\|Ga0126310_10451656	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300010044\|Ga0126310_10530224	Not Available	866	Open in IMG/M
3300010044\|Ga0126310_10774942	Not Available	735	Open in IMG/M
3300010044\|Ga0126310_10887673	Not Available	693	Open in IMG/M
3300010045\|Ga0126311_10120879	All Organisms → cellular organisms → Bacteria	1827	Open in IMG/M
3300010045\|Ga0126311_10199461	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300010146\|Ga0126320_1069297	All Organisms → cellular organisms → Bacteria → Acidobacteria	972	Open in IMG/M
3300010146\|Ga0126320_1215051	Not Available	755	Open in IMG/M
3300010146\|Ga0126320_1241287	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300010146\|Ga0126320_1242497	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300010146\|Ga0126320_1245527	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300010146\|Ga0126320_1258210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp.	915	Open in IMG/M
3300010146\|Ga0126320_1297370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter lipolyticus	821	Open in IMG/M
3300010146\|Ga0126320_1322234	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300010146\|Ga0126320_1361014	Not Available	766	Open in IMG/M
3300010146\|Ga0126320_1542536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter lipolyticus	797	Open in IMG/M
3300010166\|Ga0126306_10484905	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300010166\|Ga0126306_10612545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter lipolyticus	868	Open in IMG/M
3300010166\|Ga0126306_10931926	Not Available	705	Open in IMG/M
3300010166\|Ga0126306_11435847	Not Available	571	Open in IMG/M
3300010403\|Ga0134123_11185403	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	793	Open in IMG/M
3300011332\|Ga0126317_10046593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter lipolyticus	956	Open in IMG/M
3300011332\|Ga0126317_10112424	Not Available	726	Open in IMG/M
3300011332\|Ga0126317_10617508	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300011332\|Ga0126317_10762821	Not Available	530	Open in IMG/M
3300011332\|Ga0126317_10982949	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300011333\|Ga0127502_11240410	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300012212\|Ga0150985_100969054	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300012212\|Ga0150985_103526581	All Organisms → cellular organisms → Bacteria → Acidobacteria	1126	Open in IMG/M
3300012212\|Ga0150985_104195125	Not Available	594	Open in IMG/M
3300012212\|Ga0150985_115494934	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300012212\|Ga0150985_117746168	Not Available	737	Open in IMG/M
3300012212\|Ga0150985_118989469	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300012212\|Ga0150985_121076802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter lipolyticus	792	Open in IMG/M
3300012469\|Ga0150984_104486622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter lipolyticus	803	Open in IMG/M
3300012469\|Ga0150984_105100619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter lipolyticus	923	Open in IMG/M
3300012469\|Ga0150984_108760722	Not Available	620	Open in IMG/M
3300012469\|Ga0150984_109420235	Not Available	522	Open in IMG/M
3300012469\|Ga0150984_110323908	Not Available	599	Open in IMG/M
3300012469\|Ga0150984_112590007	Not Available	637	Open in IMG/M
3300012469\|Ga0150984_114769858	Not Available	559	Open in IMG/M
3300012469\|Ga0150984_114971713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter lipolyticus	865	Open in IMG/M
3300012469\|Ga0150984_119325019	Not Available	605	Open in IMG/M
3300014487\|Ga0182000_10525545	Not Available	556	Open in IMG/M
3300014488\|Ga0182001_10126881	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300014488\|Ga0182001_10170118	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300018465\|Ga0190269_10238466	Not Available	1015	Open in IMG/M
3300018465\|Ga0190269_11157332	Not Available	603	Open in IMG/M
3300018465\|Ga0190269_11530920	Not Available	551	Open in IMG/M
3300018466\|Ga0190268_10090325	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300018466\|Ga0190268_10240610	All Organisms → cellular organisms → Bacteria	1030	Open in IMG/M
3300018466\|Ga0190268_10488362	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300018466\|Ga0190268_12365176	Not Available	503	Open in IMG/M
3300018468\|Ga0066662_11450715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300018468\|Ga0066662_12355501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300018482\|Ga0066669_10463232	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1091	Open in IMG/M
3300018482\|Ga0066669_11180188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300018920\|Ga0190273_10106777	All Organisms → cellular organisms → Bacteria → Acidobacteria	1581	Open in IMG/M
3300018920\|Ga0190273_12018191	Not Available	535	Open in IMG/M
3300019377\|Ga0190264_10591912	Not Available	788	Open in IMG/M
3300019377\|Ga0190264_11778660	Not Available	553	Open in IMG/M
3300019767\|Ga0190267_10129974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter → Marinobacter lipolyticus	1063	Open in IMG/M
3300019767\|Ga0190267_10187312	Not Available	953	Open in IMG/M
3300019767\|Ga0190267_11225513	Not Available	552	Open in IMG/M
3300020202\|Ga0196964_10404563	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300020215\|Ga0196963_10310210	Not Available	697	Open in IMG/M
3300021067\|Ga0196978_1000001	All Organisms → cellular organisms → Bacteria → Acidobacteria	722066	Open in IMG/M
3300021374\|Ga0213881_10479496	Not Available	563	Open in IMG/M
3300021384\|Ga0213876_10000325	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	41745	Open in IMG/M
3300021445\|Ga0182009_10204585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. PA14H7	962	Open in IMG/M
3300026295\|Ga0209234_1209271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300026300\|Ga0209027_1002696	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	6723	Open in IMG/M
3300026308\|Ga0209265_1112429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300026312\|Ga0209153_1021173	All Organisms → cellular organisms → Bacteria → Acidobacteria	2148	Open in IMG/M
3300026312\|Ga0209153_1161235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300026550\|Ga0209474_10227782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1168	Open in IMG/M
3300027718\|Ga0209795_10049324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1284	Open in IMG/M
3300027750\|Ga0209461_10163598	Not Available	549	Open in IMG/M
3300028880\|Ga0307300_10339891	Not Available	516	Open in IMG/M
3300029695\|Ga0206087_1024312	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300030514\|Ga0268253_10239825	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300031093\|Ga0308197_10235054	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300031548\|Ga0307408_100175651	All Organisms → cellular organisms → Bacteria	1714	Open in IMG/M
3300031731\|Ga0307405_11367295	Not Available	618	Open in IMG/M
3300031731\|Ga0307405_11439235	Not Available	604	Open in IMG/M
3300031852\|Ga0307410_10935665	Not Available	744	Open in IMG/M
3300031901\|Ga0307406_11056827	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300031901\|Ga0307406_11148718	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300031911\|Ga0307412_10494901	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300031995\|Ga0307409_100935292	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300032126\|Ga0307415_101181688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300034006\|Ga0334934_005845	All Organisms → cellular organisms → Bacteria → Acidobacteria	1642	Open in IMG/M
3300034007\|Ga0334936_000040	All Organisms → cellular organisms → Bacteria	113554	Open in IMG/M
3300034007\|Ga0334936_053036	Not Available	838	Open in IMG/M
3300034008\|Ga0334942_061475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	914	Open in IMG/M
3300034009\|Ga0334944_003047	All Organisms → cellular organisms → Bacteria	3317	Open in IMG/M
3300034024\|Ga0334927_001762	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	8188	Open in IMG/M
3300034025\|Ga0334940_053878	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300034026\|Ga0334946_000067	All Organisms → cellular organisms → Bacteria	76410	Open in IMG/M
3300034030\|Ga0334952_000095	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	55474	Open in IMG/M
3300034135\|Ga0334929_005450	All Organisms → cellular organisms → Bacteria	3282	Open in IMG/M
3300034145\|Ga0334963_000540	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes	13732	Open in IMG/M
3300034221\|Ga0334937_053516	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300034221\|Ga0334937_184388	Not Available	578	Open in IMG/M
3300034377\|Ga0334931_000016	All Organisms → cellular organisms → Bacteria	223412	Open in IMG/M
3300034673\|Ga0314798_109430	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300034781\|Ga0334935_002103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6396	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.31%
Host-Associated	Host-Associated	22.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.96%
Plants	Host-Associated → Plants	22.70%
Aquatic	Environmental → Aquatic	11.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.48%
Freshwater	Environmental → Aquatic → Freshwater	11.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.38%
Phylloplane	Host-Associated → Plants → Phylloplane	1.42%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.71%
Roots	Host-Associated → Plants → Roots	0.71%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.48%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	11.35%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	7.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.38%
Sand	Environmental → Terrestrial → Soil → Sand	4.26%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	1.42%
Loam	Environmental → Terrestrial → Soil → Loam	0.71%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.71%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.89%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	11.35%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	7.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.09%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.38%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	4.26%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	3.55%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	1.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.71%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.71%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.71%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	15.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.06%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	11.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.93%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	6.38%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	6.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	6.38%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	6.38%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.96%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	3.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.84%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	2.84%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	1.42%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	1.42%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	1.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.71%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.71%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.71%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.71%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002915	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003570	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Bulk_34 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003575	Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005506	Soil microbial communities from Colorado Plateau, USA - Soil Crust after dry out 3A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300007790	Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projects	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014488	Bulk soil microbial communities from Mexico - San Felipe (SF) metaG	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300020215	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_5	Environmental	Open in IMG/M
3300021067	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20-13C	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300029695	Metatranscriptome of soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030514	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300034006	Biocrust microbial communities from Mojave Desert, California, United States - 30SMC	Environmental	Open in IMG/M
3300034007	Biocrust microbial communities from Mojave Desert, California, United States - 32SMC	Environmental	Open in IMG/M
3300034008	Biocrust microbial communities from Mojave Desert, California, United States - 38SMC	Environmental	Open in IMG/M
3300034009	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 40SMS	Environmental	Open in IMG/M
3300034024	Biocrust microbial communities from Mojave Desert, California, United States - 23HNC	Environmental	Open in IMG/M
3300034025	Biocrust microbial communities from Mojave Desert, California, United States - 36SMC	Environmental	Open in IMG/M
3300034026	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 42SMS	Environmental	Open in IMG/M
3300034030	Biocrust microbial communities from Mojave Desert, California, United States - 48SNC	Environmental	Open in IMG/M
3300034135	Biocrust microbial communities from Mojave Desert, California, United States - 25HNC	Environmental	Open in IMG/M
3300034145	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 59SNS	Environmental	Open in IMG/M
3300034221	Biocrust microbial communities from Mojave Desert, California, United States - 33SMC	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M
3300034673	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034781	Biocrust microbial communities from Mojave Desert, California, United States - 31SMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25387J43893_10345211	3300002915	Grasslands Soil	MKNVLTKTLVVVAGGMLVVPFVAAAALVGTRAVAGAGGAKQFLLLVALALVWTFLGGVKGFKQDGDDGREGNELPVAPRRVKSRRHAFLQTRGLKL*
soilH1_102606182	3300003321	Sugarcane Root And Bulk Soil	MKAVLMKTLVVAVGGALVVPFVAAAVLVGARAVAGAGGTRQSLFMFALALVWTLFGGVKGFARGAVGGREGHEPTVAQSRSGARRQIFLGTRGV*
Ga0007418J51697_10608671	3300003570	Avena Fatua Rhizosphere	MKAVLMKTLVVAVGGALVVPFVAAAVLVGARAVAGAGGTRQSLVMFALALVWTLFGGVKGFARGAGVGQQGHEPTNAQRSGGARRQIFLGTRGF*
Ga0007409J51694_10631591	3300003575	Avena Fatua Rhizosphere	MKTVLTKSLVVVVGGALVVPFAAAAVLVGARAVAGAGGTKQLLLLAGLALVWTFFGGVKGSAPGGSDEREGHDLFVETRRRGARRQAFLHTRGL*
Ga0066677_104807142	3300005171	Soil	MKNVLTKTLVMVAGGALVVPFVVAAALVGARAVAGAGGAKQFLLLVALALVWTFLGGIRGSERDGDDGREGNELLVAPRRAKSRRHAFLHTRGLKL*
Ga0066684_109221081	3300005179	Soil	MKNVLKKTAVVVAGGVLVVPFVAAAALVGARAVAGAGSAKQFLLLVALALVWTFLGGVKNSKRDGDDGRDGNELLVAPRRAKSRRHAFLQTRGLKL*
Ga0066671_101375893	3300005184	Soil	MLKAVLLKTLVVTIGGALVVPFVAASVLVGARAVAGAGGTRQSLVMFALALVWTLFGGVKGFARGAGVGRQGHEPTDARQSDGA
Ga0066671_102018103	3300005184	Soil	RSWRWKRRVMKNVLKKTAVVVAGGVLVVPFVAAAALVGARAVAGAGSAKQFLLLVALALVWTFLGGVKNSKRDGDDGRDGNELLVAPRRAKSRRHAFLQTRGLKL*
Ga0066671_106482861	3300005184	Soil	MKNVLTKTLVMVAGGALVVPFVAAAALVGARAVAGAGGAKQFLLLVALALVWTFLGGIRGSERDGDDGREGNELLVAPRRAKSRRHAFLHTRGLKL*
Ga0070670_1005506432	3300005331	Switchgrass Rhizosphere	MKSVLTKTLVLIAGGALVVPFVAAAVLVGARAVAGAGGAKQFLLLAGLALVWTLFGGVKGFAQNGSDEREGHELFVQPRRRGARRQTFLHTRGL*
Ga0068912_109314923	3300005506	Soil	VRMKTVLTKTLVLIAGGALVLPFVAAAVLVGARAAAGANGGGAFLLAVGLALVWTLFGGLKGFARNGADGWEGHELLVTPRRGEASRHALLDIRGL*
Ga0066702_106041381	3300005575	Soil	VPFVAAAALVGARAVAGAGGAKQFLLLVALALVWTFLGGVKSSKRDGDDEREGNELLVAPRRVRSRRHAFLQTRGLKL*
Ga0066708_109714582	3300005576	Soil	VMKNVLTKTLVMVAGGALVVPFVAAAALVGARAVAGAGGAKQFLLLVALALVWTFLGGIRGSERDGDDGREGNELLVAPRRAKSRRHAFLHTRGLKL*
Ga0066654_104238201	3300005587	Soil	MKNVLTKTLVMVAGGALVVPFVAAAALVGARAVAGAGGAKQFLLLVTLALVWTFLGGVRGSERDGDDGREGNELLVAPRRAKSRRHAFLHTRGLKL*
Ga0066696_103072553	3300006032	Soil	RSWRWKRRVMKNVLTKTLVMVAGGALVVPFVVAAALVGARAVAGAGGAKQFLLLIALALAWTFLGGVRGSKRDGDDGREGNELLVAPRRAKSRRHAFLHTRGLKL*
Ga0066696_106678851	3300006032	Soil	MKNVLKKTAVVVAGGVLVVPFVAAAALVGARAVAGAGSAKQFLLLVALALVWTFLGGVKNSKRDGDDGRDGNELLVAPRRAKSRRHAFL
Ga0082029_14895851	3300006169	Termite Nest	MKTVLTKTLVVIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVGLALVWAFFGGVKGFARIGDDEREGHELLVVHHSGEARRHTFLRTRGLF*
Ga0082029_15093352	3300006169	Termite Nest	VVVVGGALVVPFAAAAVLVGARAVAGAGGAKQLLLLAALALVWTLFGGVKGFAQIGEDEREGHELLVEPRRRGARRHTFLHTRGF*
Ga0066658_105339041	3300006794	Soil	MKNVLTKTLVMVAGGALVVPFVVAAALVGARAVAGAGGAKQFLLLVALALAWTFLGGVRGSKRDGDDGREGNELLVAPRRAKS
Ga0105679_102396112	3300007790	Soil	MLKAVLLKTLVLIVGGALVVPFVAAAVLVGARAVAGAGGTRQSLVMFALALVWTLFGGVKGFARGAVVGGEGHEPTGAVQHDGARRQIFLGTRGF*
Ga0105679_102514251	3300007790	Soil	MKTVLTKTLVVIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVGLALVWALFGGVKGFARVGDDEREGHELLVFHHSGEARRHAFLHTRGLS*
Ga0126307_109951721	3300009789	Serpentine Soil	MKKVLTKTLVLIAGGALVLPFVAAAVLVGARAVAGADGGRAFLFAVGLALVWTLFGGVKGFAQNGADGREGHELLVAPRRVEARRHALLDTRGL*
Ga0126307_110251251	3300009789	Serpentine Soil	MKTVLTKTLVLIVGGALVVPFAAAAVLVGARAVAGAGGVKQLLFAVGLALVWTLFGGVKGFAGIGDDEREGHELLVVHHSAEARRHSFLHTRGLS*
Ga0126313_110274531	3300009840	Serpentine Soil	MLIVMVGGALVVPFVAAAVLVGARAVAGAGGTRQSLVMFALALVWTFFGGVKGFARGAVVGREGHDLTDAQGGDGARRQIFLGTRGI*
Ga0126313_114618901	3300009840	Serpentine Soil	MKTVLTKTLVLIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVGLALVWTLFGGVKGFARTGNDEREGHELLVVHHSGEARRHSFLHIGGLS*
Ga0126305_100155135	3300010036	Serpentine Soil	MKTVLTKTLVVIVGGALVVPFATAAVLVGARAVAGAGGAKQLLFAVGLALVWTLFGGVKGFAKIGDDEREGHELLVVHHSGEARRHAFLHTRGLS*
Ga0126305_112490071	3300010036	Serpentine Soil	MKTVLTKTLVLIVGGALVVPFAAAAVLVGARAVAGAGGMKQLLFAVGLALVWTLFGGVKGFAGIGDDEREGHELLVVHHSGEARRTAFIPTRGLS*
Ga0126304_101252763	3300010037	Serpentine Soil	MKTVLTKTLVLIAGGALVVPFVVAAVLVGARAVAGVNGGKQFLFAFGLALVWTLSGGLKGFARGDGDEREGHELLVASRRIEAHRQAFLNTRGL*
Ga0126304_103618961	3300010037	Serpentine Soil	MKTVLTKTLVLIVGGALVVPFAAAAVLVGARAVAGAGGARQLLFAVGLALVWTLFGGVKGFAGIGDDEREGHELLVVHHSGEARRTAFIPTRGLS*
Ga0126304_104693063	3300010037	Serpentine Soil	MKTVLTKTLVLIVGGALVVPFAAAAVLVGARAVAGAGGMKQLLFAVGLALVWTLFGGVKGFARIGDDEREGHELLVVHHSGEARRPAFLHTRGLS*
Ga0126308_104926253	3300010040	Serpentine Soil	PFAAAAVLVGARAVAGAGGAKQLLFAVGLTLVWTLFGGVKGFARIGDDEREGHELLVVHHSGEARRHAFIPTRGLS*
Ga0126312_110466681	3300010041	Serpentine Soil	MKKVLTKTLVLIAGGALVLPFVAAAVLVGARAVAGANGGKQFLLATGLALVWTLFGGLKGLAQNGADGREGHELLVAPRRGEARRHAFLNTRGL*
Ga0126314_112115661	3300010042	Serpentine Soil	MKTVLTKTLVVIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVGLALVWTLFGGVKGFAQNGSDEREGHELFVEPRRRGA
Ga0126310_104516561	3300010044	Serpentine Soil	MKTVLTKTLVVIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVGLALVWTLFGGVKGFARIGDDEREGHELLVFHHSGEARRHAFLHTRGLF*
Ga0126310_105302242	3300010044	Serpentine Soil	MKKVLTKTLVLIAGGALVLPFVAAAVLVGARAVAGANGGKQFLLAVGLALVWTLFGGLKGLAQNGADGREGHELLVAPRRGEARRHAFLNTRGL*
Ga0126310_107749421	3300010044	Serpentine Soil	MKTVLTKSLVVIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLLMAALALVWTLFGGVKGFAQHGDDEREGHELFVEPRRRGARRQTFLHTRGF*
Ga0126310_108876731	3300010044	Serpentine Soil	MLKAVLLKTLIVIVGGALVVPFVAAAVLVGARAVAGAGGTRQSLVMFALALVWTFFGGVKGFARGTVGGREGHEPTAAQNRDGARRQIFLGTRGF*
Ga0126311_101208793	3300010045	Serpentine Soil	LKAVLLKTLIVVVGGALVVPFVAAAVLVGARAVAGAGGTRQSLVMFALALVWTFFGGVKGFARGAVGGREGHEPTATQNRDGASRQLFLGTRGF*
Ga0126311_101994612	3300010045	Serpentine Soil	MKTVLTKSLVVIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVGLALVWTLFGGVKGFAGIGDDEREGHELLVVHHSGEARRPAFIPTRGLS*
Ga0126320_10692971	3300010146	Soil	VVPFVAAAVLVGARAVAGAGGTRQSLVMFALALVWTFFGGVKGFARGAVGGREGHEPNGAPRRSEARRQQIFLGTRGF*
Ga0126320_12150512	3300010146	Soil	MKTVLTKSLVVIVGGALVVPFAAAAVLVGARAVAGAGGTKQFLLLAGLALVWTLFGGMKGFASNGSDEREGHELFVEPRRHEARRQTFLHTRGL*
Ga0126320_12412872	3300010146	Soil	VGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVGLALVWTLFGGVKGFARIGDEGREGHELLVVHHSGEARRHSFLPTRGLS*
Ga0126320_12424972	3300010146	Soil	VGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVGLALVWTLFGGVKGFAQVGDGEREGHELLVDPRRDEAPRHAFLHTRGLF*
Ga0126320_12455272	3300010146	Soil	EKRLMKTVLTKTLVAIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVGLALVWALFGGVKGFARVGDDEREGHELLVFHHSGEARRQAFLHTRGLF*
Ga0126320_12582103	3300010146	Soil	LTKSLVVVVGGALVVPFAAAAVLVGARAVAGAGGTKQLLLLAGLALVWTLFGGMKGFASNGSDEREGHELFVEPRRHEARRQTFLHTRGL*
Ga0126320_12973701	3300010146	Soil	MLKAVLLKTLVLIVGGALVVPFVAAAVLVGARAVAGAGGTRQSLVMFALALVWTFFGGVKGFARGAVVGTEGHEPTDARQREGARRQIFLGTSGF*
Ga0126320_13222342	3300010146	Soil	VGGALVVPFVAAAVLVGARAVAGAGGTRQSLVMFALALVWTFFGGVKGFARGAVVGGEGHEPTGAQNREGARRQIFLGTRGF*
Ga0126320_13610143	3300010146	Soil	MLKAVLLKTLIVIVGGALVLPFVAAAVLVGARAVAGAGGTRQSLVMFALALVWTLFGGVKGFARGAVGGREGHEPAAAQQHGGARRQIFLGTRGF*
Ga0126320_15425363	3300010146	Soil	VVAVGGALVVPFVAAAVLVGARAVAGAGGTRQSLVMFALALVWTLFGGVKGFARGAGVGQQGHEPTNAQRSGGARRQIFLGTRGF*
Ga0126306_104849051	3300010166	Serpentine Soil	MKTVLTKTLVLIVGGALVVPFAAAAVLVGARAVAGAGGVKQLLFAVGLALVWTLFGGVKGFARIGDDEREGHELLVVHHSGEARRQAFLPTRGLS*
Ga0126306_106125451	3300010166	Serpentine Soil	LVVPFVAAAVLVGARAVAGAGGTRQTLVMFALALVWTFFGGVKGFASGAVVGREGHDLNDSQGSDGARRQIFLGTRGI*
Ga0126306_109319261	3300010166	Serpentine Soil	MKTVLTKTLVLIVGGALVVPFAAAAVLVGARAVAGAGGARQLLFAVGLALVWTLFGGVKGFAGIGDDEREGHELLVVHHSGEARRPAFIPTRGLS*
Ga0126306_114358472	3300010166	Serpentine Soil	MKTVLTKSLVVVVGGALVVPFAAAAVLVGARAVAGAGGAKQLLLMAALALVWTLFGGVKGFAVNGDDEREGHELFVEPRRRGARRHAFLHTRGL*
Ga0134123_111854031	3300010403	Terrestrial Soil	SALVVPFAVAAVLVGARAVAGAGGAKQLLLMAALALVWTLFGGVKGFALNGSDEREGHELFVEPRRRGARPLLRPVPGR*
Ga0126317_100465931	3300011332	Soil	AVGWWHGFAVAEARRKGMLKAVLLKSLVVAVGGALVVPFVAAAVLVGARAVAGAGGTRQSLVMFALALVWTFFGGVKGFARGAVVGREGHEPTDARQRSEAHRQIFLGTRGF*
Ga0126317_101124241	3300011332	Soil	QSGCGAGGTAARPPKLGGRDMKSVLKKTLVVAVGGALVVPFVAAAVLVGARAVAGAGGTRQSLFMFALALVWTLFGGVKGFARGAVCGREGHEPTVAQHRSGARRQIFLGTRGF*
Ga0126317_106175082	3300011332	Soil	NVLTKSLVLIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVSLALVWTLFGGVKGFARGGEDGREGHELLVVHHTGEARRPTFLHTRGLS*
Ga0126317_107628212	3300011332	Soil	MKTVLTKSLVIVVGSALVVPFAAAAVLVGARAVAGAGGTKQLLLLAGLALVWTLFGGVKGFAQNGTDEREGHELFVQPRRPGARRQAFLHTRGL*
Ga0126317_109829492	3300011332	Soil	MKRVLTKTLVVIVGGALVVPFATAAVLVGARAVAGAGGAKQLLFAVGLALVWALFGGVKGFARIGDDEREGHELLVLHHSGEARRHSFLLTRELF*
Ga0127502_112404101	3300011333	Soil	MKTVLTKTLVVIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLIAVGLALVWAFFGGVKGFARVGDDEPEGHELFVVHHSGGARRHAFLPTRGLF*
Ga0150985_1009690542	3300012212	Avena Fatua Rhizosphere	GALVVPFVAAAVLVGARAVAGAGGTRQSLVMFALALVWTFFGGVKGFARGAVVGGEGHEPTDAVQHDGARRQLFLGTRGF*
Ga0150985_1035265814	3300012212	Avena Fatua Rhizosphere	VLMKTLVVAVGGALVVPFVAAAVLVGARAVAGAGGTRQSLFMFALALVWTLFGGVKGFARGAVGGREGHEPTVAQNRSGARRQIFLGTRGV*
Ga0150985_1041951251	3300012212	Avena Fatua Rhizosphere	MKTVLTKSLVVVVGGALVVPFAAAAVLVEARAVAGAGGAKQFLLLAGLALVWTLFGGVKGFAQNGTDEREGHELFVQPRRRGARRQAFLHTRGL*
Ga0150985_1154949341	3300012212	Avena Fatua Rhizosphere	MKNVLTKTLVLIVGGALVVPFAAASVLVGARAIAGAGGAKQLLLAVGLALFWTLFGGVKGFARGVDDGREGHELLVVHHTGEARRHNFLHTRGLS*
Ga0150985_1177461683	3300012212	Avena Fatua Rhizosphere	VLMKTLVVAVGGALVVPFVAAAVLVGARAVAGAGGTRQSLLMFALALIWTLFGGVKGFARGTVGGREGHEPTVSQSHSGARRQIFLGTRGF*
Ga0150985_1189894691	3300012212	Avena Fatua Rhizosphere	MKTVLTKSLVVIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVGLALVWALFGGVKGFARIGDDEREGHELLVFHHSGEARRHAFLHTRGLS*
Ga0150985_1210768023	3300012212	Avena Fatua Rhizosphere	VGGALVVPFVAAAVLVGARAVAGAGGTRQSLVMFALALVWTFFGGVKGFARGAVVGTEGHEPTDARQREGARRQIFLGTSGF*
Ga0150984_1044866221	3300012469	Avena Fatua Rhizosphere	KTLVVAVGGALVVPFVAAAVLVGARAVAGAGGTRQSFFMFALALVWTLFGGVKGFARGAVGGREGHEPTVAQSRSGASRQIFLGTRGF*
Ga0150984_1051006193	3300012469	Avena Fatua Rhizosphere	ALVVPFVAAAVLVGARAVAGAGGTRQSLVMFALALVWTFFGGVKGFARGAVDGREGHEPTGARRRSEARRQIFLGTRGF*
Ga0150984_1087607221	3300012469	Avena Fatua Rhizosphere	MKTVLTKSLVVVVGGALVVPFAAAAVLVGARAVAGAGGTKQLLLLAGLALVWTFFGGVKGFAQNGSDEREGHELFVEPRRHEARRQTFLHTRGF*
Ga0150984_1094202351	3300012469	Avena Fatua Rhizosphere	MKTVLTKTLVVIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVGLALVWALFGGVKGFVRIGDDEREGHELLVFHHSGEARRHAFLHTRGLS*
Ga0150984_1103239082	3300012469	Avena Fatua Rhizosphere	MKTVLTKSLVVIVGGVLVVPFAAAAVLVGARAVAGAGGAKQLLLMAALALVWTLFGGVKGFALNGSDECEGHELFVEPHRGEARRPSFLHTRGL*
Ga0150984_1125900072	3300012469	Avena Fatua Rhizosphere	VVVGGALVVPFAAAAVLVGARAVAGAGGAKQLLLLAALALVWTLFGGVKGFASNGDDEREGHELFVEPRRSGARRQTILHTREF*
Ga0150984_1147698581	3300012469	Avena Fatua Rhizosphere	VVAVGGALVVPFVAAAVLVGARAVAGAGGTRQSLLMFALALIWTLFGGVKGFARGTVGGREGHEPTVSQSHSGARRQIFLGTRGF*
Ga0150984_1149717131	3300012469	Avena Fatua Rhizosphere	VGGTAFWSPKLRGMIMKAVLMKTLVVAVGGALVVPFVAAAVLVGARAVAGAGGTRQSLVMFALALVWTLFGGVKGFARGAGVGQQGHEPTNAQRSGGARRQIFLGTRGF*
Ga0150984_1193250192	3300012469	Avena Fatua Rhizosphere	AAAGLVALPRVRRSSGEVDMKTVLMKTLVVAVGGALVVPFVAAAVLVGARAVAGAGGTRQSLFMFALALVWTLFGGVKGFARGAVGGREGHEPTVAQNRSGARRQIFLGTRGV*
Ga0182000_105255451	3300014487	Soil	MKTVLTKTLVLIAGGALVLPFVAAAVLVGARAVAGANGGKQFLLATGLALVWTLFGGVKGFAQNGAEGREGHELLVTPRRGEARRHAFLNTRGL*
Ga0182001_101268811	3300014488	Soil	MKTVLTKSLVVVVGGALVVPFAAAAVLVGARAVAGAGGAKQLLLLAALALVWTLFGGVKGFAQIGEDEREGHELLVEPRGRGARRHSFLHTRGS*
Ga0182001_101701181	3300014488	Soil	MKTVLTKTLVVIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVGLALVWALFGGVKGFARIGDDEREGHELLVFHHSGEARRHAFLHTRGLS*
Ga0190269_102384661	3300018465	Soil	MKTVLTKSLVVVVGGALVVPFAAAAVLVGARAVAGAGGAKQLLLMAALALVWTLFGGVKGFALNGSDEREGHELFVEPRQRGARRHTFPHTRGL
Ga0190269_111573321	3300018465	Soil	MKTVLTKTLVLIVGGALVVPFAAAAVLVGARAVAGAGGARQLLFAVGLALVWALFGGVKGFARLGDEEHEGHELLVVHHSGEARRHSLLPTRGLS
Ga0190269_115309201	3300018465	Soil	MLILIAGGALVLPFVAAAVLVGARAVAGANGGKQFLLAVGLALVWTLFGGLKGFAQNGADGREGHELLVAPRRGEARRHAFLNTRGL
Ga0190268_100903254	3300018466	Soil	ALVLPFVAAAVLVGARAVAGANGGKQFLLAVGLALVWTLFGGLKGLAQNGADGREGHELLVAPRRGEAHRHAFLNTRGL
Ga0190268_102406103	3300018466	Soil	MKTVLTKTLVLIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVGLALVWAFFGGVKGFARVGDEEHEGHELLVVHHSGGARRHSFLPTRGLS
Ga0190268_104883622	3300018466	Soil	MKTVLTKTLVLIAGGALVLPFVAAAVLVGARAVAGANGGGAFLLAVGLALVWTLFGGLKGFARNGADGREGHELLVAPRRGEARRHAFLDLRGL
Ga0190268_123651761	3300018466	Soil	MKTVLTKTLVLIAGGALVLPFVAAAVLVGARAVAGADGGSAFLLAVGLALVWTLFGGLKGFAQNGADGREGHDLLVAPRRGEARRHAFLDIRGL
Ga0066662_114507151	3300018468	Grasslands Soil	MKNVLTKTLVMLTGGALVVPFVAAAALVGARAVAGAGGAKQFLLLVALALVWTFLGGVRGSERDGDGREGNELLVAPRRAKSRRHAFLHTRGLKL
Ga0066662_123555012	3300018468	Grasslands Soil	VVPFVTAAALVGARAVAGAGGAKQFLLLVALALAWTFLGGVQGFKRDGDDGREGNELLVAPRRVKSRRHAFLRTRGLKL
Ga0066669_104632322	3300018482	Grasslands Soil	MKNVLTKTLVVVAGGMLVVPFVAAAALVGTRAVAGAGGAKQFLLLVALALVWTFLGGVKGFKQDGDDGREGNELPVTPRRVKSRRHAFLQTRGLKL
Ga0066669_111801881	3300018482	Grasslands Soil	RAVAGAGGAKQFLLLVALALVWTFLGGVTGFKQDGDGGREGNELPVAPRRVKSRRHAFLQTRGLKL
Ga0190273_101067771	3300018920	Soil	MKTVLTKTLVLIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVGLALVWTLFGGVKGFARIGDDEREGHELLVVHHSGEARRHAFLHTRGLS
Ga0190273_112428511	3300018920	Soil	LKAVLLKTLIVIVGGALVVPFVAAAVLVGARAVAGAGGTRQSLVMFALALVWTFFGGVKGFARGAVVGREGHDLADAQGSD
Ga0190273_120181911	3300018920	Soil	MKTVLTKSLVVVVGGALVVPFAAAAVLVGARAVAGAGGAKQVLFAVGLALVWTLFGGVKGFARIGDEEREGHDLLVVHHSGEARRHSFLPTSGLS
Ga0190264_105919121	3300019377	Soil	MKTVLTKSLVVVVGGALVVPFAAAAVLVGARAVAGAGGAKQLLLMAALVLVWTLFGGVKGFAQHGEDEREGHDLFVEPRRRGARRHAFLHTRGL
Ga0190264_117786601	3300019377	Soil	MKTVLTKTLVLIVGGALVVPFAAAAVLVGARAVAGAGGTKQLLFAVGLALVWALFGGVKGFARIGDDEREGHELLVVHHSGEARRHSFLHTRGLS
Ga0190267_101299741	3300019767	Soil	MKLVLTKTLVLIAGGALVLPFVAAAVLVGARAAAGANGGRAFLFAVGLALVWTLFGGLKGLAQNGADGREGHELLVAPRRGEAHRHAFLNTRGL
Ga0190267_101873121	3300019767	Soil	MLKAVLLKTLVVIVGGALVVPFVAAAVLVGARAVAGAGGTRQSLVMFALALVWTFFGGVKGFARGAAVGREGHEPTAAQNCDGARRQLFLGTRGF
Ga0190267_112255132	3300019767	Soil	MKTVLTKSLVVVVGGALVVPFAAAAVLVGARAVAGAGGTKQLLLMAALALVWTLFGGVKGFARIGDDEREGHELLVVHHSAGARRHAFLHTRGLS
Ga0196964_104045631	3300020202	Soil	MKTVLTKTLVVIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVGLALVWALFGGVKGFARVGDDEREGHELLVFHHSGEARRHAFLHTRGLS
Ga0196963_103102101	3300020215	Soil	MKTVLTKTLVVIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVGLALVWALFGGVKGFARIGDDEREGHELLVFHHSGEARRHAFLHTRGLS
Ga0196978_1000001448	3300021067	Soil	MKTVLTKTLVVIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVGLALVWALFGGVKGFARMGDDEREGHELLVFHHSGEARRHAFLHTRGLS
Ga0213881_104794962	3300021374	Exposed Rock	GVALVVPFAAAAVLVGARAVAGAGGAKQLFLLAGLALVWTLFGGVKGFAPNGTDEREGHELLVEPRRRGARRQAFLAFLHTRGL
Ga0213876_1000032512	3300021384	Plant Roots	MKTVLTKSLVVVVGGALVVPFAAAAVLVGARAVAGAGGTKQLLLMAALALVWTLFGGVKGFAQQGEDEREAHELFVEPRRREARRQTFLHTRGL
Ga0182009_102045853	3300021445	Soil	MKTVLTKSLVIVVGGALVVPFAAAAVLVGARAVAGAGGAKQFLLLAGLALVWTLFGGVKGFAQNGSDECEGHELFVAPRRRAARRQTFLHTRGF
Ga0209234_12092712	3300026295	Grasslands Soil	MKNVLTKTLVMVAGGALVVPFVVAAALVGARAVAGAGGAKQFLLLIALALVWTFLGGVRGSKRDGDDGREGNELLVAPRRAKSRRHAFLHTRGLKL
Ga0209027_10026965	3300026300	Grasslands Soil	MKNVLTKTLVVVAGGMLVVPFVAAAALVGTRAVAGAGGAKQFLLLVALALVWTFLGGVKGFKQDGDDGREGNELPVAPRRVKSRRHAFLQTRGLKL
Ga0209265_11124291	3300026308	Soil	MKNVLTKTLVMVAGGALVVPFVAAAALVGARAVAGAGGAKQFLLLVTLALVWTFLGGVRGSERDGDDGREGNELLVAPRRAKSRRHAFLHTRGLKL
Ga0209153_10211734	3300026312	Soil	MKNVLKKTAVVVAGGVLVVPFVAAAALVGARAVAGAGSAKQFLLLVALALVWTFLGGVKNSKRDGDDGRDGNELLVAPRRAKSRRHAFLQTRGLKL
Ga0209153_11612351	3300026312	Soil	MKNVLTKTLVMVAGGALVVPFVVAAALVGARAVAGAGGAKQFLLLIALALAWTFLGGVRGSKRDGDDGREGNELLVAPRRAKSRRHAFLHTRGLKL
Ga0209474_102277822	3300026550	Soil	MKNVLKKTAVVVAGGVLVVPFVAAAALVGARAVAGAGSAKQFLLLVALALVWTFLGGVKNSKRDGGDGREGNELLVAPRRAKSRRHAFLQTRGLKL
Ga0209795_100493241	3300027718	Agave	VKTVLTKTLVVIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVALALVWALFGGVKGFARVGDDEREGHELLVVHHSGEARRHAFIPTRGLS
Ga0209461_101635981	3300027750	Agave	MKTVLTKTLVVIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVGLALVWALFGGVKGFARIGDDEREGHELLVEPRGRGARRHSFLHTRGS
Ga0307300_103398911	3300028880	Soil	MKTVLTKTLVLMVGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVGLALVWTLFGGVKGFAQNGSDEREGHELFVEPRRRGARRQAFLHTRGL
Ga0206087_10243121	3300029695	Soil	RTEKRLMKTVLTKTLVVIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLFAVGLALVWALFGGVKGFARMGDDEREGHELLVFHHSGEARRHAFLHTRGLS
Ga0268253_102398252	3300030514	Agave	TVLRSPKLRGEGMLKAVLLKTLVVAVGGALVVPFVAAAVLVGARAVAAAGGTRQSLVMFALALVWTLFGGVKGFARGAGGDRQGHEPAAAQVRGEASRQVFLDTRGF
Ga0308197_102350542	3300031093	Soil	AFRSPKLRGMIMKAVLMKTLVVAVGGALVVPFVAAAVLVGARAVAGAGGTRQSLVMFALALVWTLFGGVKGFARGAGSGQQGHEPTAAPNRVGARRQIFLGTRGF
Ga0307408_1001756511	3300031548	Rhizosphere	MKTVLTKTLVLIVGGALVVPFAAAAVLVGARAVAGAGGMKQLLFAVGLALVWTLFGGVKGFARIGDDEREGHELLVVHHSGEGRRQTFLHTRGLS
Ga0307405_113672951	3300031731	Rhizosphere	MKTVLTKTLVVIAGGALVVPFVAASVLVGARAVAGAGGAKQLLFAVGLALVWTLFGGVKGFARSGDDGREGHELLVVH
Ga0307405_114392351	3300031731	Rhizosphere	VVPFAAAAVLVGARAVAGAGGAKQLLLMAALALVWTLFGGVKGFASNAGDEREGHELFVEPRRRGARRHTFLHTRGL
Ga0307410_109356652	3300031852	Rhizosphere	MKTVLTKTLVLIVGGALVVPFAAAAVLVGARAVAGAGGMKQLLFAVGLALVWTLFGGVKGFARIGDDEREGHELLVVHHSGEGRRHTFLHTRGLS
Ga0307406_110568272	3300031901	Rhizosphere	MKTVLTKTLVVIAGGALVVPFVAASVLVGARAVAGAGGAKQLLFAVGLALVWTLFGGVKGFARSGDDGREGHELLVVHHSGEARRHAFLHTRGLS
Ga0307406_111487182	3300031901	Rhizosphere	MKTVLTKTLVLIVGGALVVPFAAAAVLVGARAVAGAGGMKQLLFAVGLALVWTLFGGVKGFARIGDDEREGHELLVVHHSGEGRRHAFLHTRGLS
Ga0307412_104949011	3300031911	Rhizosphere	MKTVLTKTLVLIVGGALVVPFAAAAVLVGARAVAGAGGSKQLLFAVGLALVWTLFGGVKGFARSGDDGREGHELLVVHHSGEARRHAFLHTRGLS
Ga0307409_1009352921	3300031995	Rhizosphere	LVVPFAAAAVLVGARAVAGAGGMKQLLFAVGLALVWTLFGGVKGFARIGDDEREGHELLVVHHSGEGRRHAFLHTRGLS
Ga0307415_1011816882	3300032126	Rhizosphere	MKTVLRKTLVLIAGGALVLPFVAAAVLVGARAVAGANGGSAFLLAVGLALVWTLFGGLKGFAQNGADGREGHELLVAPRQGEARRHAFLDIRGL
Ga0334934_005845_2_265	3300034006	Biocrust	SLVVVVGGALVVPFAAAAVLVGARAVAGAGGAKQLLLMAALALVWTLFGGVKGFAQNGSDEREGHELFVEPLRRGARRQAFLHTRGF
Ga0334936_000040_54121_54405	3300034007	Biocrust	MKTVLTKTLVLIAGGALVLPFVAAAVLVGARAVAGANGGKQFLLAVGLALVWTLFGGVKGFAQNGADGREGHELLVAPRHVEAHRHAFLDTRGL
Ga0334936_053036_431_715	3300034007	Biocrust	MKTVLTKSLVAVVGGALVVPFAAAAVLVGARAVAGAGGAKQLLLMAVLALVWTLFGGVKGSAVNGDDEREGHELFVEPLRRGARRHAFLHTRGL
Ga0334942_061475_556_840	3300034008	Biocrust	MKTVLTKSLVVIVGGALVVPFAAAAVLVGARAVAGAGGAKQLLLMAALALVWTLFGGVKGFAVNGDDELESHELFVEPRRRGARRHAFLHTLGR
Ga0334944_003047_1886_2170	3300034009	Sub-Biocrust Soil	MRRVLTKTLVLIAGGALVLPFAAAAVLVGARAVAGVNGGKQFLFAVALALVWSLFGGVKGFAQNGADGREGHELLVAPPRGGARRHAFLNTSGL
Ga0334927_001762_7594_7881	3300034024	Hypolithic Biocrust	MKTVLTKTLVLIVGGALVVPFATAAVLVGARAVAGAGGAKQLLFAVGLALVWTLFGGVKGFARIGDDEREGHELLVVHHSGGARRHSFLHTRGLS
Ga0334940_053878_816_1094	3300034025	Biocrust	MRTVLTKTLVLIAGGALVVPFVAAAVLVGARAVAGANGGKQFLFAVGLALVWTLFGGVKGFAQNGADGRDGHVLLVAPRRGEARRHAFLNARG
Ga0334946_000067_39155_39442	3300034026	Sub-Biocrust Soil	MRTVLTKTLVLIAGGALVLPFAAAAVLVGARAAAGVDGGRAFLFAVGLALVWALFGGLKGFAQNGADGREGHSLLVAPLRGEARRQSAFLHTGGL
Ga0334952_000095_31818_32105	3300034030	Biocrust	MKTVLTKTLVLFAGGALVVPFVAAAVLVGARAVAGAGGGKSLLFAAGLALVWTFFGGVKGFARDAADGREGYELLVAPRHAEAGRRHAFLNTRGV
Ga0334929_005450_145_429	3300034135	Hypolithic Biocrust	MKTVLTKSLVLIAGGALVVPFVAAAVLVGARAVAGANGGKQFLFAVGLALVWTLFGGVKGFAQNGADGREGHELLVAPRGHEARRHAFLNTQGL
Ga0334963_000540_12885_13169	3300034145	Sub-Biocrust Soil	MKTVLTKTLVLIAGGALVLPFVAAAVLVGARAVAGANGGGAFLLAVGLALVWTLFGGLKGFARNGADGREGHELLVASRRGEAGRHALLDLRGL
Ga0334937_053516_64_339	3300034221	Biocrust	MLTKTLVLIAGGALVLPFVAAAVLVGARAVAGSDGGRQLLFAVGLALVWTLFGGLKGLNADASGGREGHEPLVAPHRGGARRQAFLNLRGL
Ga0334937_184388_2_265	3300034221	Biocrust	SLVVVVGGALVVPFAAAAVLVGARAVAGAGGAKQLLLMAALALVWTLFGGVKGFAVNGDDEREGHELFVEPRRRGARRHAFLHTRGL
Ga0334931_000016_170365_170649	3300034377	Sub-Biocrust Soil	MKTVLTKSLVVVVGGALVVPFAAAAVLVGARAVAGAGGTKQLLLMAALALVWTLFGGVKGFAQNGSDEREGHELFVEPRRCGARRQAFLHTRGF
Ga0314798_109430_307_591	3300034673	Soil	MKTVLTKSLVVVVGSALVVPFAAAAVLVGARAVAGTGGTKQLLLMAAVALVWTLFGGVKGFAQNGNDEREGHELFVQPRRRGARRQAFLHTRGL
Ga0334935_002103_808_1092	3300034781	Biocrust	MKRVLTKSLVVVVGGALVVPFAAAAVLVGARAVAGAGGAKQLLLMAALALVWTLFGGVKGFAQNGSDEREGHELFVEPLRRGARRQAFLHTRGF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053532

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences