Metagenome / Metatranscriptome Family F053584

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053584
Family Type	Metagenome / Metatranscriptome
Number of Sequences	141
Average Sequence Length	88 residues
Representative Sequence	MGKTYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRKGTPRTAD
Number of Associated Samples	89
Number of Associated Scaffolds	141

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.25 %
% of genes near scaffold ends (potentially truncated)	25.53 %
% of genes from short scaffolds (< 2000 bps)	75.18 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.305 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (23.404 % of family members)
Environment Ontology (ENVO)	Unclassified (46.099 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.411 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.36% β-sheet: 0.00% Coil/Unstructured: 44.64%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 141 Family Scaffolds
PF00072	Response_reg	3.55
PF00501	AMP-binding	2.84
PF12849	PBP_like_2	2.13
PF08238	Sel1	1.42
PF00149	Metallophos	1.42
PF05762	VWA_CoxE	1.42
PF08007	JmjC_2	0.71
PF13637	Ank_4	0.71
PF13489	Methyltransf_23	0.71
PF01588	tRNA_bind	0.71
PF14319	Zn_Tnp_IS91	0.71
PF13620	CarboxypepD_reg	0.71
PF02311	AraC_binding	0.71
PF14559	TPR_19	0.71
PF03476	MOSC_N	0.71
PF00589	Phage_integrase	0.71
PF13517	FG-GAP_3	0.71
PF06792	UPF0261	0.71
PF13414	TPR_11	0.71
PF02417	Chromate_transp	0.71
PF05592	Bac_rhamnosid	0.71
PF12531	DUF3731	0.71
PF01548	DEDD_Tnp_IS110	0.71
PF08447	PAS_3	0.71
PF10604	Polyketide_cyc2	0.71
PF00561	Abhydrolase_1	0.71

COG ID	Name	Functional Category	% Frequency in 141 Family Scaffolds
COG0073	tRNA-binding EMAP/Myf domain	Translation, ribosomal structure and biogenesis [J]	0.71
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	0.71
COG2517	Predicted RNA-binding protein, contains C-terminal EMAP domain	General function prediction only [R]	0.71
COG2850	Ribosomal protein L16 Arg81 hydroxylase, contains JmjC domain	Translation, ribosomal structure and biogenesis [J]	0.71
COG3217	N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domain	Defense mechanisms [V]	0.71
COG3408	Glycogen debranching enzyme (alpha-1,6-glucosidase)	Carbohydrate transport and metabolism [G]	0.71
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.71
COG5441	ATP-binding helicase-inhibiting domain, Tm-1/UPF0261 family	Defense mechanisms [V]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.01 %
Unclassified	root	N/A	21.99 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.01 %
Unclassified	root	N/A	21.99 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.30 %
Unclassified	root	N/A	21.99 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	66.67 %
Unclassified	root	N/A	21.99 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.42 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	62.41 %
Unclassified	root	N/A	21.99 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.13 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.42 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	0.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.70 %
Unclassified	root	N/A	21.99 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.42 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.42 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	0.71 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.70 %
Unclassified	root	N/A	21.99 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	1.42 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.42 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.70 %
Unclassified	root	N/A	21.99 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1.42 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.42 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.70 %
Unclassified	root	N/A	21.99 %
Hymenobacteraceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae	1.42 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.42 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.70 %
Unclassified	root	N/A	21.99 %
Hymenobacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter	1.42 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.42 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.70 %
Unclassified	root	N/A	21.99 %
unclassified Hymenobacter	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter → unclassified Hymenobacter	1.42 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.42 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.71 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.70 %
Unclassified	root	N/A	21.99 %
Hymenobacter sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter → unclassified Hymenobacter → Hymenobacter sp.	1.42 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.42 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000579\|AP72_2010_repI_A01DRAFT_1001075	All Organisms → cellular organisms → Bacteria	5598	Open in IMG/M
3300002568\|C688J35102_120905836	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2189	Open in IMG/M
3300003505\|JGIcombinedJ51221_10027022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2062	Open in IMG/M
3300004081\|Ga0063454_100002539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3555	Open in IMG/M
3300004119\|Ga0058887_1445762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	981	Open in IMG/M
3300005177\|Ga0066690_10208416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	1302	Open in IMG/M
3300005332\|Ga0066388_100008519	All Organisms → cellular organisms → Bacteria → Acidobacteria	7697	Open in IMG/M
3300005332\|Ga0066388_100806936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1530	Open in IMG/M
3300005332\|Ga0066388_101689700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1120	Open in IMG/M
3300005434\|Ga0070709_10010845	All Organisms → cellular organisms → Bacteria → Proteobacteria	5058	Open in IMG/M
3300005434\|Ga0070709_10220272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1353	Open in IMG/M
3300005434\|Ga0070709_10292351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1187	Open in IMG/M
3300005435\|Ga0070714_100094610	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2622	Open in IMG/M
3300005435\|Ga0070714_100262542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1599	Open in IMG/M
3300005436\|Ga0070713_100106378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2439	Open in IMG/M
3300005436\|Ga0070713_101278587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711	Open in IMG/M
3300005439\|Ga0070711_101888006	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300005533\|Ga0070734_10003904	All Organisms → cellular organisms → Bacteria	14893	Open in IMG/M
3300005555\|Ga0066692_10072503	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1979	Open in IMG/M
3300005602\|Ga0070762_10610275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300005764\|Ga0066903_100041578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5431	Open in IMG/M
3300005764\|Ga0066903_100173208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3162	Open in IMG/M
3300005764\|Ga0066903_100332730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2437	Open in IMG/M
3300005764\|Ga0066903_100709825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1775	Open in IMG/M
3300005764\|Ga0066903_102007952	All Organisms → cellular organisms → Bacteria	1111	Open in IMG/M
3300006028\|Ga0070717_10031527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4265	Open in IMG/M
3300006059\|Ga0075017_101178153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300006163\|Ga0070715_10558306	Not Available	665	Open in IMG/M
3300006173\|Ga0070716_100022334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3343	Open in IMG/M
3300006173\|Ga0070716_100421209	Not Available	966	Open in IMG/M
3300006173\|Ga0070716_100558633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300006175\|Ga0070712_100004900	All Organisms → cellular organisms → Bacteria	8279	Open in IMG/M
3300006755\|Ga0079222_10177258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1251	Open in IMG/M
3300006854\|Ga0075425_101802422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300006914\|Ga0075436_101286392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300010043\|Ga0126380_10026486	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2871	Open in IMG/M
3300010043\|Ga0126380_11296994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300010046\|Ga0126384_10996957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300010048\|Ga0126373_10092700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2778	Open in IMG/M
3300010048\|Ga0126373_10270838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1680	Open in IMG/M
3300010048\|Ga0126373_10331746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1528	Open in IMG/M
3300010048\|Ga0126373_10691706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1077	Open in IMG/M
3300010048\|Ga0126373_10695068	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300010048\|Ga0126373_10708405	Not Available	1065	Open in IMG/M
3300010360\|Ga0126372_10648178	Not Available	1022	Open in IMG/M
3300010361\|Ga0126378_10524973	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1299	Open in IMG/M
3300010361\|Ga0126378_10533067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1289	Open in IMG/M
3300010361\|Ga0126378_12628864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300010361\|Ga0126378_12871703	Not Available	550	Open in IMG/M
3300010361\|Ga0126378_13152254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300010366\|Ga0126379_10375056	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter → unclassified Hymenobacter → Hymenobacter sp.	1462	Open in IMG/M
3300010376\|Ga0126381_100022835	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7364	Open in IMG/M
3300010376\|Ga0126381_101964588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	843	Open in IMG/M
3300010376\|Ga0126381_102079345	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	818	Open in IMG/M
3300010376\|Ga0126381_103792696	Not Available	590	Open in IMG/M
3300010398\|Ga0126383_10086898	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2751	Open in IMG/M
3300010398\|Ga0126383_10345892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1505	Open in IMG/M
3300010398\|Ga0126383_10586912	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300010398\|Ga0126383_13482640	Not Available	514	Open in IMG/M
3300011120\|Ga0150983_10119112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300012212\|Ga0150985_102489549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300012212\|Ga0150985_119119941	Not Available	889	Open in IMG/M
3300012957\|Ga0164303_10444797	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300012960\|Ga0164301_10911678	Not Available	683	Open in IMG/M
3300012961\|Ga0164302_10076704	Not Available	1765	Open in IMG/M
3300012971\|Ga0126369_10526756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1243	Open in IMG/M
3300012987\|Ga0164307_11040219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300012989\|Ga0164305_10980598	Not Available	717	Open in IMG/M
3300012989\|Ga0164305_11370916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300015371\|Ga0132258_10241822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4405	Open in IMG/M
3300015371\|Ga0132258_11259577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1869	Open in IMG/M
3300015374\|Ga0132255_101006883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1250	Open in IMG/M
3300015374\|Ga0132255_101303533	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1095	Open in IMG/M
3300016422\|Ga0182039_11275439	Not Available	665	Open in IMG/M
3300017924\|Ga0187820_1303214	Not Available	526	Open in IMG/M
3300017936\|Ga0187821_10367907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300017970\|Ga0187783_10001936	All Organisms → cellular organisms → Bacteria	15366	Open in IMG/M
3300017970\|Ga0187783_11283429	Not Available	528	Open in IMG/M
3300017972\|Ga0187781_10028227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3876	Open in IMG/M
3300017975\|Ga0187782_11121875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300017975\|Ga0187782_11628755	Not Available	510	Open in IMG/M
3300020579\|Ga0210407_10003262	All Organisms → cellular organisms → Bacteria	13288	Open in IMG/M
3300020579\|Ga0210407_10212433	Not Available	1504	Open in IMG/M
3300020579\|Ga0210407_10662358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300020582\|Ga0210395_10215409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1441	Open in IMG/M
3300021168\|Ga0210406_10338280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1216	Open in IMG/M
3300021170\|Ga0210400_10046366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3381	Open in IMG/M
3300021432\|Ga0210384_10644279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	950	Open in IMG/M
3300021474\|Ga0210390_10316670	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1321	Open in IMG/M
3300021475\|Ga0210392_10234544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1294	Open in IMG/M
3300021478\|Ga0210402_10009720	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8332	Open in IMG/M
3300021559\|Ga0210409_10037206	All Organisms → cellular organisms → Bacteria	4633	Open in IMG/M
3300021560\|Ga0126371_10023048	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5762	Open in IMG/M
3300021560\|Ga0126371_10050432	All Organisms → cellular organisms → Bacteria	3982	Open in IMG/M
3300021560\|Ga0126371_10054971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3820	Open in IMG/M
3300021560\|Ga0126371_10318008	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Hymenobacteraceae → Hymenobacter → unclassified Hymenobacter → Hymenobacter sp.	1686	Open in IMG/M
3300021560\|Ga0126371_10375365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1561	Open in IMG/M
3300021560\|Ga0126371_10793882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1093	Open in IMG/M
3300021560\|Ga0126371_11428458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300021560\|Ga0126371_11925576	Not Available	710	Open in IMG/M
3300022504\|Ga0242642_1011162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1110	Open in IMG/M
3300022523\|Ga0242663_1002458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1967	Open in IMG/M
3300022717\|Ga0242661_1052598	Not Available	764	Open in IMG/M
3300022726\|Ga0242654_10419028	Not Available	517	Open in IMG/M
3300025898\|Ga0207692_10064584	All Organisms → cellular organisms → Bacteria → Acidobacteria	1907	Open in IMG/M
3300025905\|Ga0207685_10070589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1414	Open in IMG/M
3300025905\|Ga0207685_10807748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300025915\|Ga0207693_10046882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3396	Open in IMG/M
3300025928\|Ga0207700_10044774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3260	Open in IMG/M
3300025928\|Ga0207700_10154061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1902	Open in IMG/M
3300025928\|Ga0207700_10793409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300025939\|Ga0207665_10325366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1155	Open in IMG/M
3300025939\|Ga0207665_11699459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300026683\|Ga0208210_100979	Not Available	521	Open in IMG/M
3300027070\|Ga0208365_1029760	Not Available	718	Open in IMG/M
3300027502\|Ga0209622_1041469	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300027787\|Ga0209074_10474384	Not Available	538	Open in IMG/M
3300027821\|Ga0209811_10017135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2348	Open in IMG/M
3300027826\|Ga0209060_10011227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5261	Open in IMG/M
3300027874\|Ga0209465_10097135	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300027884\|Ga0209275_10120366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1364	Open in IMG/M
3300028906\|Ga0308309_11458911	Not Available	585	Open in IMG/M
3300030848\|Ga0075388_11151940	Not Available	828	Open in IMG/M
3300030855\|Ga0075374_11499463	Not Available	617	Open in IMG/M
3300030974\|Ga0075371_11780262	Not Available	594	Open in IMG/M
3300031090\|Ga0265760_10273848	Not Available	591	Open in IMG/M
3300031128\|Ga0170823_13747485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2871	Open in IMG/M
3300031231\|Ga0170824_110843757	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	934	Open in IMG/M
3300031231\|Ga0170824_127514644	Not Available	635	Open in IMG/M
3300031446\|Ga0170820_12639201	Not Available	825	Open in IMG/M
3300031469\|Ga0170819_17502814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1045	Open in IMG/M
3300031469\|Ga0170819_17559511	Not Available	529	Open in IMG/M
3300031740\|Ga0307468_100605036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300031753\|Ga0307477_10339186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1034	Open in IMG/M
3300032174\|Ga0307470_10101249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1650	Open in IMG/M
3300032174\|Ga0307470_10174441	Not Available	1344	Open in IMG/M
3300032174\|Ga0307470_10287113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1108	Open in IMG/M
3300032180\|Ga0307471_101853562	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300032770\|Ga0335085_10066141	All Organisms → cellular organisms → Bacteria → Acidobacteria	4806	Open in IMG/M
3300032770\|Ga0335085_10318927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1834	Open in IMG/M
3300033289\|Ga0310914_10343586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1349	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.33%
Host-Associated	Host-Associated	5.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.20%
Plants	Host-Associated → Plants	5.67%
Aquatic	Environmental → Aquatic	2.13%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.20%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.26%
Freshwater	Environmental → Aquatic → Freshwater	1.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.42%
Sediment	Environmental → Aquatic → Sediment	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.74%
Loam	Environmental → Terrestrial → Soil → Loam	30.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.26%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	16.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.06%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.26%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.13%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	23.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.26%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.55%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.55%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.84%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.13%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.13%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.13%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.42%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.42%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.42%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004119	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF210 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026683	Grasslands soil microbial communities from Chapel Hill, North Carolina, USA that are Nitrogen fertilized -NN352 (SPAdes)	Environmental	Open in IMG/M
3300027070	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF004 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030855	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA9 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030974	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A01DRAFT_10010754	3300000579	Forest Soil	MGKTGQSGEQQIWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTNGEERDSAAYSLATLTKLETALQRKGTLRTAD*
C688J35102_1209058362	3300002568	Soil	MDRESERQRVWSLLSDAGLIDIPAEQFPERIKEAKNAVMERLSELLETAIDIKERDSAAYSLATLKKLETTLQRNTKPGSSE*
JGIcombinedJ51221_100270221	3300003505	Forest Soil	MKIRAIPRKVREEAERYIMGKTYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTNDIEERDSAAYSLATLKKLETALQRKGTPRTAD*
Ga0063454_1000025392	3300004081	Soil	MDRESERQRVWSLLSDAGLIDIPAEQFPERIKEAKNAVMERLSELLETAIDINERDSAAYSLATLKKLETTLQRNTKPGSSE*
Ga0058887_14457621	3300004119	Forest Soil	MGKTYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTNDIEERDSAAYSLATLKKLETALQRKGTPRTAD*
Ga0066690_102084161	3300005177	Soil	MGKTYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQQKGTPRTADGIGDRKF
Ga0066388_1000085197	3300005332	Tropical Forest Soil	MGEIDESGKQQVWSLLSEAGLVDIPTDAFSERVKEAKKAVMDRLGELLQSTADIEERDSAAYSLATLKKLETALQRKGTFPTAD*
Ga0066388_1008069362	3300005332	Tropical Forest Soil	MGKTYESGKQQVWTELSGAGLVDIPTDEFSERVKEAKKAVMDHLGELLESTTDIEERESAAYSLATLKKVETALQRKATPRTAG*
Ga0066388_1016897003	3300005332	Tropical Forest Soil	MDKMYESGKERVWSLLSEAGLLDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRKGAFRTAD*
Ga0070709_100108455	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MGKTGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDFEERDSAAYSLATLTKLETALQRKGTLRTAD*
Ga0070709_102202723	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MGKLYQSGKQQGWSLLSEAGLVDIPADEFSERVKEAKKAVMDQLGELFETTSETEECDSAAYSLATLKKLE
Ga0070709_102923512	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKIRMIPSEVREEAERYIMGKAYQSGKQQVWSLLSEVGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKRLETALQRKGTPRTAD*
Ga0070714_1000946102	3300005435	Agricultural Soil	MKIRMIPSEVREEAERYIMGKAYQSGKQQVWSLLSEVGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRKGTSRTAD*
Ga0070714_1002625422	3300005435	Agricultural Soil	MGKTYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRKGTPRTAD*
Ga0070713_1001063781	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VDITLSLIPSEVIEESERSVMGKTYQSRKQQVWTLLSEAGLVDIPTDEFSERVKEAKKAVMDHLGELLESTTDIEERDSAAYSLATLKKLETALQRKGAPRTAD*
Ga0070713_1012785872	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MGKLYQSGKQQGWSLLSEAGLVDIPADEFSERVKEAKKAVMDQLGELFETTSETEECDSAAYSLATLKKLETA
Ga0070711_1018880061	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MGKTYQSRKQQVWTLLSEAGLVDIPTDEFSERVKEAKKAVMDHLGELLESTTDIEERDSAAYSLATLKKLETALQR
Ga0070734_100039046	3300005533	Surface Soil	MGKIYESGKQPGWSLLSEAGLVDIPADEFSERVKEAKKAVTDRLGELLEAAAAIEERHSAAYSLATLKQLETALQRKKAFPTAD*
Ga0066692_100725033	3300005555	Soil	MGKTYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQQKGTPRTAD*
Ga0070762_106102751	3300005602	Soil	MKIRAIPRKVREEAERYIMGKTYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTEIEERDSAAYSLATLKKLETALQRRGTSRTAD*
Ga0066903_1000415782	3300005764	Tropical Forest Soil	MGKTYESGKQEVWTLLSEAGLVDIATDQFSERVKEAKKAVMDRLGELLASTTDIEERDSAAYSLATLKKLETALRRKGTPDRAD*
Ga0066903_1001732083	3300005764	Tropical Forest Soil	MGKTYESGKQQVWTELSEAGLVDIPTDEFSERVKEAKKAVMDHLGELLESTTDIEERESAAYSLATLKKVETALQRKATPRTAG*
Ga0066903_1003327303	3300005764	Tropical Forest Soil	LLSEAGLVDIRTDEFSERVKEAKKAVMDRLGELLESATHLEERDSAAYSLATLKKVESALQRKGTSHRAD*
Ga0066903_1007098253	3300005764	Tropical Forest Soil	MGKTYESGKQQVWTLLSEAGLVDIPTDEFSERVKEAKNAVMDRLGELLQSATDIEERDSAAYSLATLKKVETALQRKGTSHRGD*
Ga0066903_1020079522	3300005764	Tropical Forest Soil	MGKTYQSGQQVRSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLEAALQRKGTPPTGD*
Ga0070717_100315279	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MKIRMIPSEVREEAERYIMGKAYQSGKQQVWSLLSEVGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRKGTPPAD*
Ga0075017_1011781532	3300006059	Watersheds	MKIRVIPSEVREEAERYIMGKTYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLEAALQRRGTTRTAD*
Ga0070715_105583062	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MGKTYQSRKQQVWTLLSEAGLVDIPTDEFSERVKEAKKAVIDHLGELLESTTDIEERDSAAYSLATLKKLETALQRKGTPRTAD*
Ga0070716_1000223346	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VDITLSLIPSEVIEESERSVMGKTYQSRKQQVWTLLSEAGLVDIPTDEFSERVKEAKKAVMDHLGELLESTTDIEERDSAAYSLATLKKLETALQRKGAPPTAD*
Ga0070716_1004212092	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MGKTYQSRKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRKGTSRTAD*
Ga0070716_1005586332	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKIRVIPSEDREEAERYIMGKTYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKTAVMDRLGELLESTTAIEERDSAAYSLATLKKLEDALQRKGTPRTAD*
Ga0070712_1000049008	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MGKTYQSRKQQVWTLLSEAGLVDIPTDEFSERVKEAKKAVMDHLGELLESTTDIEERDSAAYSLATLKKLETALQRNGAPRTAD*
Ga0079222_101772582	3300006755	Agricultural Soil	MGETERMGKIYESGKQRVWSLLSEAGLVDIPTHEFSERVKEAKKAVMDRLGELLETTADIEERDSAAYSLATLKKLETALQRKKGAFPTAD*
Ga0075425_1018024222	3300006854	Populus Rhizosphere	MGKTYQSRKQQVWTLLSEAGLVDIPTDEFSERVKEAKKAVMDHLGELLESTTDIEERDSAAYSLATLKKLETALQRKGAPRTAD*
Ga0075436_1012863921	3300006914	Populus Rhizosphere	MGKTYQSRKQQVWTLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRKGAPRTAD*
Ga0126380_100264863	3300010043	Tropical Forest Soil	VAIKIRLIQREHIGETESRFMGEIDESGKQQVWSLLSEAGLVDIPTDAFSERVKEAKKAVMDRLGELLQSTADIEERDSAAYSLATLKKLETALQRKGTFPTAD*
Ga0126380_112969942	3300010043	Tropical Forest Soil	MGKMYESGKQQVWALLSEAGLVDIRTDEFSERVKEAKKAVMDRLGELLESATDIEERDSAAYSLATLKKVESALQRKGTTHNTD*
Ga0126384_109969571	3300010046	Tropical Forest Soil	MGKIYESGKQGVWNLLSEAGLVDIPTDAFSERVKEAKKAVMDRLGELLQSTADIEERDSAAYSLATLKKLE
Ga0126373_100927001	3300010048	Tropical Forest Soil	VTIRVSLTEVREEAERNIMGKADQSEKQQVWTLLSEAGLVDIPTDEFSERVKDAKKAIMDRLGELLTSTTDVEERDSAAYSLATLKKLEIALQRRE*
Ga0126373_102708383	3300010048	Tropical Forest Soil	VMGKIHESGKQRVWTLLSEAGLVDIPTDEFSERVKDAKKAVTDRLGELLESTADIEERDSAAYSLATLKKLETALQRKGAFPTAD*
Ga0126373_103317461	3300010048	Tropical Forest Soil	MAVKIRLIGSERIGETERSVMGKNYESGKQPGWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLETTADIEERDSAAYSLATLKKLETALQRKRAFPTAD*
Ga0126373_106917063	3300010048	Tropical Forest Soil	VAIKIRLIQREHIGETESRFMGEIDESGKQQVWSLLSKAGLVDIPTDAFSERVKEAKKAVMDRLGELLQSTADIEERDSAAYSLATLKKLETALQRKG
Ga0126373_106950682	3300010048	Tropical Forest Soil	MNLGNNKVCTLLWEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRKGAFRTAD*
Ga0126373_107084052	3300010048	Tropical Forest Soil	VMGKIHESGKQRVWTLLSEAGLVDIPTDEFSERVKEAKKAMMDRLGELLASTTDVVERDSAAYSLATLKKLETALQRKGAFPTAD*
Ga0126372_106481781	3300010360	Tropical Forest Soil	GKTYESGKQEVWTLLSEAGLVDIATDQFSERVKEAKKAVMDRLGELLASTTDIEERDSAAYSLATLKKLETAFRRKGTPDRAD*
Ga0126378_105249733	3300010361	Tropical Forest Soil	MGKIHESGKQRVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLETTADIEERDSAAYSLATLKKLETALQRKRAFPTAD*
Ga0126378_105330671	3300010361	Tropical Forest Soil	MGKAYQSEKQQVWTLLSEAGLVDIPTDEFSERVKDAKKAIIDRLGELLASTTDVEQRNSTAYSLATLKKLETALQRTASPHPADCPVADTKP*
Ga0126378_126288641	3300010361	Tropical Forest Soil	MGKIYESGKQRVWRLLSEAGLLDIPTDEFSERVKEAKKAVMDRLGELLESTADIEERDSAAHSLATLKKLETALQRKGAFPTAD*
Ga0126378_128717031	3300010361	Tropical Forest Soil	MGKIYESGKQRVWSLLSEAGLVDIPTDEFSERVKDAKKAVTDRLGELLESTADIEECDSAAYSLATLKKLETALQRKGAFPTAD*
Ga0126378_131522541	3300010361	Tropical Forest Soil	MGKTYESGKQQVWTELSEAGLVDIPTDEFSERVKEAKKAVMDHLGELRESTTDIEERESAAYSLATLKKVETALQRKATPRTAG*
Ga0126379_103750562	3300010366	Tropical Forest Soil	MDKMYESGKQRVWSLLSEAGLIDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRKGAFRTAD*
Ga0126381_1000228355	3300010376	Tropical Forest Soil	VDKIDESGKQQVWSLLSEAGLVDIPTDEFSERVKEAKQAVMDRLGELLETTADIEERDSAAYSLATLKTLETALQRKGAFPPAD*
Ga0126381_1019645881	3300010376	Tropical Forest Soil	MNLGNNKVCILLSEAGLVDIPTDEFSERVKEAKNAVMDRLGELLQSATDIEERDSAAYSLATLKKVETALQRKGTSHRGD*
Ga0126381_1020793452	3300010376	Tropical Forest Soil	VTIRVSLTEVREEAERNIMGKANQSEKQQVWTLLSEAGLVDIPTDKFSECVKDAKKAIMDRLGELLASTTHVEERDAAAYSLATLKKLEAALQQRGSHHRADPVVDDRKS*
Ga0126381_1037926962	3300010376	Tropical Forest Soil	EAERNIMGKADQSEKQQVWTLLSEAGLVDIPTDEFSERVKDAKKAIMDRLGELLTSTTDVEERGSAAYSLATLKKLEIALQRRE*
Ga0126383_100868984	3300010398	Tropical Forest Soil	MGKIYESGKQGVWNLLSEAGLVDIPTDEFSERVREAKKVVMDRLGELLESTADIEERDSAVYSLATLKKLETALQRKGAFPTAD*
Ga0126383_103458922	3300010398	Tropical Forest Soil	VDKIDESGKQQVWSLLSEAGLVDIPTDEFSERVKEAKQAVMDRLGELLETTADIEERDSAAYSLATLKTLETALQRKRAFPAAD*
Ga0126383_105869122	3300010398	Tropical Forest Soil	MNLGNNKVWTLLSEAGLADIPADEFSERVKDAKKAVIARLGELLESPTEIEERDSAAYSLATLKKLETALQRK*
Ga0126383_134826401	3300010398	Tropical Forest Soil	MGKRYESGKQQVWALLSEAGLVDIRTDEFSERVKEAKKAVMDRLGELLESATHLEERDSAAYSLATLKKVESALQRKGTSHRAD*
Ga0150983_101191122	3300011120	Forest Soil	MKIRAIPREVREEAERYIMGKTYQSGKQPVWSLLSEAGLVDIPTDEFSERVKEAKKTVMDRLDELLESTNDIEERDSAAYSLATLKKLETALQRKGTPRTAD*
Ga0150985_1024895491	3300012212	Avena Fatua Rhizosphere	MGKTNQSRKQQVWSLLSEAGLVDIPTDEFSERVKEAKTAVMDRLGELLDSTTDIEERDSAAYSLATLKKLETALQRKQNPHTGD*
Ga0150985_1191199412	3300012212	Avena Fatua Rhizosphere	MGKTYQSERSREQHVWSLLSEAGLVDIPAEDYSKRVKEAKKAVMDRLGELLESRTDVEERESAAYSLATLKKLETALQRKETPHIVD*
Ga0164303_104447973	3300012957	Soil	MKIRMIPSEVREEAERYIMGKTGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESKTDIEERDAAAYSLATLKK
Ga0164301_109116781	3300012960	Soil	MIPSEVREEAERYIMGKAYQSGKQQVWSLLSEVGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRKGTPRTAD*
Ga0164302_100767041	3300012961	Soil	ITLSLIPSEVIEEAERSVMGKTYQSRKQQVWTLLSEAGLVDIPTDEFSERVKEAKKAVMDHLGELLESTTDIEERDSAAYSLATLKKLETALQRKGAPRTAD*
Ga0126369_105267562	3300012971	Tropical Forest Soil	MGKTYESGKQQVWTLLSEAGLVDIPTDEFSERVKEAKNAVMDRLGELLESATDIEERDSAAYSLATLKKVETALQRKGTSHRGD*
Ga0164307_110402192	3300012987	Soil	MKIRMIPSEVREEAERYIMGKAYQSGKQQVWSLLSEVGLVDIPTDEFSERVKEAKKAVMDRLGELLEATTDIEERDSAAYSLATLKKLETALQRKGTSRTAD*
Ga0164305_109805981	3300012989	Soil	QSGKQQVWTLLSEAGLVDIPTDEFSERVKEAKKAVMDHLGELLESTTDIEERDSAAYSLATLKKLETALQRKGAPRTAD*
Ga0164305_113709161	3300012989	Soil	MKIRMIPSEVREEAERCIMGKTYQSGKQQVWSVLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQGKGTPRTAD*
Ga0132258_102418222	3300015371	Arabidopsis Rhizosphere	MGKTDPSRKQQVWSVLSEAGLVDIPSDEFSERVKQAKTAVMERLGELLDSTTDIEERDSAAYSLATLKKLETALQRKGNPRTAD*
Ga0132258_112595772	3300015371	Arabidopsis Rhizosphere	VDITLSLIPSEIIEEAERSVMGKTYQSRKQQVWTLLSEAGLVDIPTDEFSERVKEAKKAVMDHLGELLESTTDIEERDSAAYSLATLTKLETALQRKGAPRTAD*
Ga0132255_1010068833	3300015374	Arabidopsis Rhizosphere	MGKTGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDFEERDSAAYSLATLTKLETALQRK
Ga0132255_1013035333	3300015374	Arabidopsis Rhizosphere	VDITLSLIPSEIIEEAERSVMGKTYQSRKQQVWTLLSEAGLVDIPTDEFSERVKEAKKAVMDHLGELLESTTDIEERDSAAYSLATLKKLETALQRKGAPRTAD*
Ga0182039_112754391	3300016422	Soil	MGKTYQSGQQVRSLLSEAGLVDIPTDEFSERVKEAKKPVMDRLGELLESTTDIEERDSAAYSLATLKKLEAALQRKGTPPTGD
Ga0187820_13032141	3300017924	Freshwater Sediment	SQVDMKIALISGDVRAERRTIIMAKTYQSGKQPNWTLLSEAGLVDIPIEKFSERVKEAKKAVMNRLGELLESTTDIEERASTAYSLATLKKLEIALERKGPSHNAD
Ga0187821_103679072	3300017936	Freshwater Sediment	MAKTYQSGKQPNLTLLSEAGLVDIPIEKFSERVKEAKKAVMNRLGELLESTTDIEERASTAYSLATLKKLE
Ga0187783_1000193619	3300017970	Tropical Peatland	VDVKILVILSEVREEAERHIMGNTYQSGKQKVWTLLSEAGLVDIPTDEFSERVKEAKKAIMDRLGELLASATDVEERDSAAYSLATLKKLETALQRRGSPQARDDSR
Ga0187783_112834291	3300017970	Tropical Peatland	HIMGKTYPSGKQQVWTLLSEAGLVDIPADEFSERVKEAKKAVMDRLGELLESTTDVKERDSAACSLATLKKLETALQRRGSPHRVD
Ga0187781_100282273	3300017972	Tropical Peatland	MKIRVIPTEVGEEAERYVMGKTYQSGQSGKQQVRSLLSEAGLVDIPTDEFSERVKEAKKAVLDRLGELLESTTDIEERDSAAYSLATLKKLEIALQRKGTPRTAD
Ga0187782_111218752	3300017975	Tropical Peatland	MGKTYPSGKQQVWTLLSEAGLVDIPADEFSERVKEAKKAVMDRLGELLESTTDVKERDSAACSLATLKKLETALQRRGSPHRVD
Ga0187782_116287551	3300017975	Tropical Peatland	SVFGVYLSQVQGGSAQTARSLVDVKILVILSEVREEAERHIMGNTYQSGKQKVWTLLSEAGLVDIPTDEFSERVKEAKKAIMDRLGELLASATDVEERDSAAYSLATLKKLETALQRRGSPQARDDSR
Ga0210407_1000326210	3300020579	Soil	MGKTYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKRLETALQRKGTPRTAD
Ga0210407_102124333	3300020579	Soil	MGKTYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKVVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRKGTPRTAD
Ga0210407_106623582	3300020579	Soil	VREEAERYIMGKTYQSGKQQVWSLLSEAGLVDIPTDQFSERVKEAKKAVMDRLGELLESTNDIEERDSAAYSLATLKKLETALQRKGTPRTAD
Ga0210395_102154093	3300020582	Soil	MKIRAIPRKVREEAERYIMGKTYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTNDIEERDSAAYSLATLKKLETALQRKGTPRTAD
Ga0210406_103382803	3300021168	Soil	MKIRMIPSEVREEAERCIMGKTYQSGKQQVWSVLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESKTDIEERDAAAYSLATLKKLETALQGKGTPRTAD
Ga0210400_100463666	3300021170	Soil	MGKTYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTNDIEERDSAAYSLATLKKLETALQRKGTPRTAD
Ga0210384_106442792	3300021432	Soil	MGKLYQSGKQQGWSLLSEAGLVDIPADEFSERVKEAKKAVMDHLGELFETTSETEECDSAAYSLATLKKLETALQRNSPTAD
Ga0210390_103166702	3300021474	Soil	MKIRAIPRKVREEAERYIMGKTYQSGKQQVWSLLSEAGLVDIPTDQFSERVKEAKKAVMDRLGELLESTNDIEERDSAAYSLATLKKLETALQRKGTPRTAD
Ga0210392_102345443	3300021475	Soil	MKIRVIPSEIREEAGRNIMGRAYQSGKQQVWTLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTEIEERDSAAYSLATLKKLETA
Ga0210402_100097208	3300021478	Soil	TYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKVVMDRLGYLLESTTDIEERDSAAYSLATLKKLETALQRKGTPRTAD
Ga0210409_100372062	3300021559	Soil	MGKTYQSGKQPVWSLLSEAGLVDIPTDEFSERVKEAKKTVMDRLDELLESTNDIEERDSAAYSLATLKKLETALQRKGTPRTAD
Ga0126371_100230486	3300021560	Tropical Forest Soil	MGKTYQSGQQVRSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLEAALQRKGTPPTGD
Ga0126371_100504323	3300021560	Tropical Forest Soil	MGKTYESGKQEVWTLLSEAGLVDIATDQFSERVKEAKKAVMDRLGELLASTTDIEERDSAAYSLATLKKLETALRRKGTPDRAD
Ga0126371_100549715	3300021560	Tropical Forest Soil	MGEIDESGKQQVWSLLSKAGLVDIPTDAFSERVKEAKKAVMDRLGELLQSTADIEERDSAAYSLATLKKLETALQRKGTFPTAD
Ga0126371_103180082	3300021560	Tropical Forest Soil	MDKMYESGKQRVWSLLSEAGLIDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRKGAFRTAD
Ga0126371_103753652	3300021560	Tropical Forest Soil	MNLGNNKVCTLLWEAGLVDIPTDEFSERVKEAKKAVMARLGELLESVTDIEERDSVAYSLATLKKIETALQRKGTSHRAD
Ga0126371_107938821	3300021560	Tropical Forest Soil	MGKIHESGKQRVWSLLSEAGLVDIPTDAFSGRVKEAKKAVMDRLGELLQSTADIEERDSAAYSLATLKKLETALQRKGN
Ga0126371_114284583	3300021560	Tropical Forest Soil	MGKTYESGKQQVWTELSEAGLVDIPTDEFSERVKEAKKAVMDHLGELLESTTDIEERESAAYSLATLKKVE
Ga0126371_119255762	3300021560	Tropical Forest Soil	MGKAYQSEKQQVWTLLSEAGLVDIPTDEFSERVKDAKKAIIDRLGELLASTTDVEQRNSTAYSLATLKKLETALQRTASPHPADCPVADTKP
Ga0242642_10111623	3300022504	Soil	MKIRAIPRKVREEAERYIMGKTYQSGKLQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTNDIEERDSAAYSLATLKKLETALQRKGTPRTAD
Ga0242663_10024583	3300022523	Soil	MKIRAIPREVREEAERYIMGKTYQSGKQPVWSLLSEAGLVDIPTDEFSERVKEAKKTVMDRLDELLESTNDIEERDSAAYSLATLKKLETALQRKGTPRTAD
Ga0242661_10525981	3300022717	Soil	REEAERYIMGKTYQSGKQQVWSLLSEAGLVDIPTDQFSERVKEAKKAVMDRLGELLESTNDIEERDSAAYSLATLKKLETALQRKGTPRTAD
Ga0242654_104190281	3300022726	Soil	KQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKRLETALQRKGTPRTAD
Ga0207692_100645843	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKIRMIPSEVREEAERYIMGKAYQSGKQQVWSLLSEVGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRKGTPRTAD
Ga0207685_100705891	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MGKTGKQQVWSLLSEAGLVDIPTDEFSERVKGAKKAVMDRLGELLESTTDFEERDSAAYSLATLTKLETALQRKGTLRTAD
Ga0207685_108077481	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MGKTYQSRKQQVWTLLSEAGLVDIPTDEFSERVKEAKKAVIDHLGELLESTTDIEERDSAAYSLATLKKLETALQRNGAPRTAD
Ga0207693_100468826	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VDITLSLIPSEVIEEAERSVMGKTYQSRKQQVWTLLSEAGLVDIPTDEFSERVKEAKKAVMDHLGELLESTTDIEERDSAAYSLATLKKLETALQRKGAPRTAD
Ga0207700_100447743	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MGKTGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDFEERDSAAYSLATLTKLETALQRKGTLRTADFCDLLIEV
Ga0207700_101540613	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VDITLSLIPSEVIEESERSVMGKTYQSRKQQVWTLLSEAGLVDIPTDEFSERVKEAKKAVMDHLGELLESTTDIEERDSAAYSLATLKKLETALQRKGAPRTAD
Ga0207700_107934092	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MGKLYQSGKQQGWSLLSEAGLVDIPADEFSERVKEAKKAVMDQLGELFETTSETEECDSAAYSLATLKKLETALQRNFPAAD
Ga0207665_103253661	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MGKTYQSGKQPVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRKGTSRTAD
Ga0207665_116994592	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MKIRVIPSEDREEAERYIMGKTYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKTAVMDRLGELLESTTAIEERDSAAYSLATLKKLEDALQRKGTPRTAD
Ga0208210_1009791	3300026683	Soil	AERYIMVKTYQSGQQVRSLLSEAGLVDIPTDEVSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRKGTPPAD
Ga0208365_10297602	3300027070	Forest Soil	REEAERYIMGKTYQSGKQPVWSLLSEAGLVDIPTDEFSERVKEAKKTVMDRLDELLESTNDIEERDSAAYSLATLKKLETALQRKGTPRTAD
Ga0209622_10414692	3300027502	Forest Soil	MGKTYQSGKQQVWSLLSEAGLVDIATDEFSERVKEAKNAVMDRLGELLASTTDIEERDSAAYSVATLKKLETALQGKGTPRTAD
Ga0209074_104743841	3300027787	Agricultural Soil	MGETERMGKIYESGKQRVWSLLSEAGLVDIPTHEFSERVKEAKKAVMDRLGELLETTADIEERDSAAYSLATLKKLETALQRKKGAFPTAD
Ga0209811_100171352	3300027821	Surface Soil	MGKTGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRKGTSRTAD
Ga0209060_100112273	3300027826	Surface Soil	MGKIYESGKQPGWSLLSEAGLVDIPADEFSERVKEAKKAVTDRLGELLEAAAAIEERHSAAYSLATLKQLETALQRKKAFPTAD
Ga0209465_100971352	3300027874	Tropical Forest Soil	QSGQQVRSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLQSTADIEERDSAAYSLATLKKLETALQRKGTFPTAD
Ga0209275_101203662	3300027884	Soil	MKIRAIPRKVREEAERYIMGKTYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKRLETALQRKGTPRTAD
Ga0308309_114589111	3300028906	Soil	YLSQVQRRLGIIRPILGDMKIRAIPRKVREEAERYIMGKTYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTNDIEERDSAAYSLATLKKLETALQRKGTPRTAD
Ga0075388_111519401	3300030848	Soil	MNIRVIPSEVREEAERYIMGKAYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRKGTPRTAD
Ga0075374_114994632	3300030855	Soil	MGKTYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKVVMDRLGELLESTTDIEERDSAAYSLATLK
Ga0075371_117802621	3300030974	Soil	MGKTYQSGKQQVWSLLSEAGLVDIPTGEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRKGTPRTAD
Ga0265760_102738481	3300031090	Soil	QQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRRGTNRTAD
Ga0170823_137474855	3300031128	Forest Soil	MGKTYQSGKQQVWSLLSEAGLVDIPTGEFSESVKEAKKAVMDRLGELLESTTEIEERDSAAYSLATLKKLETALQRKGTPRTAD
Ga0170824_1108437571	3300031231	Forest Soil	MNIRVIPSEVREEAERYIMGKAYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLESALQRKETSRTAD
Ga0170824_1275146441	3300031231	Forest Soil	AERYIMGKTYQSGKQQVWSLLSEAGLVDIPTGEFSERVKEAKKAVMDRLGELLESTTEIEERDSAAYSLATLKKLETALQRKGTPRTAD
Ga0170820_126392011	3300031446	Forest Soil	MGKTYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKVVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRKGTP
Ga0170819_175028141	3300031469	Forest Soil	MGKTYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRRGTSRTAD
Ga0170819_175595111	3300031469	Forest Soil	MGKTYQSGKQQVWSLLSEAGLVDIPTDQFSERVKEAKKAVMDRLGELLESTTEIEERDSAAYSLATLKKLETALQRKGTPRTAD
Ga0307468_1006050361	3300031740	Hardwood Forest Soil	MKIRVIPSEDREEAERYIMGKTYQSGKQQVWSLLSEAGLVDIPTDEFSERVKEAKTAVMDRLGELLESTTDIEERDSAAYSLATLKKLEAALQRKGTPRAD
Ga0307477_103391862	3300031753	Hardwood Forest Soil	MGKTYQSGKQQVWSLLSEAGLLDIPTDEFSERVKEAKKAVMDRLGELLESTNDIEERDSAAYSLATLKKLETALQRKGTPRTAD
Ga0307470_101012492	3300032174	Hardwood Forest Soil	MGKTYQSGKQQVWSVLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESKTDIEERDAAAYSLATLKKLETALQGKGTPRTAD
Ga0307470_101744412	3300032174	Hardwood Forest Soil	TYQPGKQQVWSLLSEAGLVDIPTDEFSERVKEAKEAVMDRLGELLGSTTDIEERDSAAYSLATLKKLETALQRKGTPRTGD
Ga0307470_102871132	3300032174	Hardwood Forest Soil	KQQVWRLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKRLETALQRKGTPRTAD
Ga0307471_1018535622	3300032180	Hardwood Forest Soil	MGKTYQSRKQQVWSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKRLETALQRKGTPRTAD
Ga0335085_100661418	3300032770	Soil	MGKAYQSGEQPNWTLLSEAGLVDIPIEEFLERVKEAKKAVVNRLGELLESTTDIEERASAAHSLATLKKLEIALQRKESSDSTD
Ga0335085_103189272	3300032770	Soil	MGKIYQSGKQEVCTLLSEAGLVDIHTDQFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKLETALQRKETSHRAD
Ga0310914_103435861	3300033289	Soil	MGKTYQSGQQVRSLLSEAGLVDIPTDEFSERVKEAKKAVMDRLGELLESTTDIEERDSAAYSLATLKKL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053584

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences