Metagenome / Metatranscriptome Family F053863

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F053863
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	50 residues
Representative Sequence	MATTWELMAICIEDAVRAEDLVRELAFRRELRLDPQKALSAFELRAKPAR
Number of Associated Samples	118
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.43 %
% of genes near scaffold ends (potentially truncated)	32.86 %
% of genes from short scaffolds (< 2000 bps)	81.43 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.857 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (18.571 % of family members)
Environment Ontology (ENVO)	Unclassified (28.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.85% β-sheet: 0.00% Coil/Unstructured: 46.15%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF00005	ABC_tran	50.00
PF01061	ABC2_membrane	5.71
PF00520	Ion_trans	3.57
PF02585	PIG-L	1.43
PF00583	Acetyltransf_1	1.43
PF02771	Acyl-CoA_dh_N	0.71
PF07992	Pyr_redox_2	0.71
PF01544	CorA	0.71
PF00009	GTP_EFTU	0.71
PF07676	PD40	0.71
PF00137	ATP-synt_C	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	1.43
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.71
COG0636	FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K	Energy production and conversion [C]	0.71
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.86 %
Unclassified	root	N/A	27.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.86 %
Unclassified	root	N/A	27.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.86 %
Unclassified	root	N/A	27.14 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	54.29 %
Unclassified	root	N/A	27.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.71 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.71 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	54.29 %
Unclassified	root	N/A	27.14 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	43.57 %
Unclassified	root	N/A	27.14 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.71 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.71 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	43.57 %
Unclassified	root	N/A	27.14 %
Microgenomates group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group	0.71 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.71 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	43.57 %
Unclassified	root	N/A	27.14 %
Candidatus Microgenomates	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Microgenomates	0.71 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.71 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.71 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.71 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10046067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2445	Open in IMG/M
3300004156\|Ga0062589_101133059	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300004157\|Ga0062590_102150231	Not Available	583	Open in IMG/M
3300004463\|Ga0063356_101118026	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300004463\|Ga0063356_103918518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	641	Open in IMG/M
3300004479\|Ga0062595_101709210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	593	Open in IMG/M
3300005093\|Ga0062594_101837652	Not Available	640	Open in IMG/M
3300005166\|Ga0066674_10011086	All Organisms → cellular organisms → Bacteria	3728	Open in IMG/M
3300005289\|Ga0065704_10567196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	625	Open in IMG/M
3300005293\|Ga0065715_10137380	All Organisms → cellular organisms → Bacteria	1906	Open in IMG/M
3300005334\|Ga0068869_100140294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1866	Open in IMG/M
3300005345\|Ga0070692_10709984	Not Available	677	Open in IMG/M
3300005354\|Ga0070675_100669171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	944	Open in IMG/M
3300005438\|Ga0070701_10318534	Not Available	961	Open in IMG/M
3300005440\|Ga0070705_100382760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1036	Open in IMG/M
3300005467\|Ga0070706_100000654	All Organisms → cellular organisms → Bacteria	39587	Open in IMG/M
3300005530\|Ga0070679_100897905	Not Available	830	Open in IMG/M
3300005536\|Ga0070697_100549498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1013	Open in IMG/M
3300005545\|Ga0070695_101452771	Not Available	570	Open in IMG/M
3300005549\|Ga0070704_100304859	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300005556\|Ga0066707_10473305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	813	Open in IMG/M
3300005559\|Ga0066700_10668264	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300005617\|Ga0068859_100396582	All Organisms → cellular organisms → Bacteria	1476	Open in IMG/M
3300005617\|Ga0068859_100773166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1049	Open in IMG/M
3300006049\|Ga0075417_10000875	All Organisms → cellular organisms → Bacteria	7600	Open in IMG/M
3300006049\|Ga0075417_10104637	All Organisms → cellular organisms → Bacteria	1286	Open in IMG/M
3300006846\|Ga0075430_100186081	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Microgenomates group → Candidatus Microgenomates	1727	Open in IMG/M
3300006852\|Ga0075433_10154310	All Organisms → cellular organisms → Bacteria	2043	Open in IMG/M
3300006852\|Ga0075433_10283176	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300006853\|Ga0075420_100575433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	972	Open in IMG/M
3300006876\|Ga0079217_10459417	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300006894\|Ga0079215_10113700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1220	Open in IMG/M
3300006894\|Ga0079215_11380741	Not Available	549	Open in IMG/M
3300006918\|Ga0079216_10174185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1150	Open in IMG/M
3300007004\|Ga0079218_10268853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1360	Open in IMG/M
3300007004\|Ga0079218_10920992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	862	Open in IMG/M
3300007004\|Ga0079218_11374937	Not Available	751	Open in IMG/M
3300007076\|Ga0075435_100297261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1380	Open in IMG/M
3300007258\|Ga0099793_10268760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	825	Open in IMG/M
3300009012\|Ga0066710_100309490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2318	Open in IMG/M
3300009038\|Ga0099829_10045266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3230	Open in IMG/M
3300009053\|Ga0105095_10815455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	523	Open in IMG/M
3300009088\|Ga0099830_11611391	Not Available	541	Open in IMG/M
3300009089\|Ga0099828_11345060	Not Available	631	Open in IMG/M
3300009090\|Ga0099827_10058280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2933	Open in IMG/M
3300009147\|Ga0114129_10040272	All Organisms → cellular organisms → Bacteria	6587	Open in IMG/M
3300009176\|Ga0105242_11239417	Not Available	767	Open in IMG/M
3300009823\|Ga0105078_1027695	Not Available	682	Open in IMG/M
3300010397\|Ga0134124_10655088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1034	Open in IMG/M
3300010399\|Ga0134127_11857283	Not Available	679	Open in IMG/M
3300010400\|Ga0134122_10022890	All Organisms → cellular organisms → Bacteria	4700	Open in IMG/M
3300012189\|Ga0137388_10514092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1112	Open in IMG/M
3300012203\|Ga0137399_10125187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2025	Open in IMG/M
3300012203\|Ga0137399_10175316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1728	Open in IMG/M
3300012203\|Ga0137399_10765320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	813	Open in IMG/M
3300012204\|Ga0137374_10086198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3020	Open in IMG/M
3300012206\|Ga0137380_10184396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1897	Open in IMG/M
3300012225\|Ga0137434_1077449	Not Available	530	Open in IMG/M
3300012355\|Ga0137369_10138445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1946	Open in IMG/M
3300012355\|Ga0137369_10740610	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300012355\|Ga0137369_10889895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	599	Open in IMG/M
3300012358\|Ga0137368_10687162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	644	Open in IMG/M
3300012360\|Ga0137375_11195125	Not Available	583	Open in IMG/M
3300012363\|Ga0137390_10164838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2204	Open in IMG/M
3300012685\|Ga0137397_10023430	All Organisms → cellular organisms → Bacteria	4357	Open in IMG/M
3300012918\|Ga0137396_10110888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1969	Open in IMG/M
3300012925\|Ga0137419_10127232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	1808	Open in IMG/M
3300012925\|Ga0137419_11277524	Not Available	616	Open in IMG/M
3300012925\|Ga0137419_11775477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	527	Open in IMG/M
3300013100\|Ga0157373_10970184	Not Available	633	Open in IMG/M
3300015371\|Ga0132258_10665654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2619	Open in IMG/M
3300015372\|Ga0132256_100187891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2105	Open in IMG/M
3300015374\|Ga0132255_102946507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	727	Open in IMG/M
3300017657\|Ga0134074_1236102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	655	Open in IMG/M
3300017997\|Ga0184610_1267809	Not Available	566	Open in IMG/M
3300018027\|Ga0184605_10076367	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300018027\|Ga0184605_10468604	Not Available	553	Open in IMG/M
3300018028\|Ga0184608_10018247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2510	Open in IMG/M
3300018028\|Ga0184608_10104292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1187	Open in IMG/M
3300018028\|Ga0184608_10150311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1003	Open in IMG/M
3300018031\|Ga0184634_10074333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1449	Open in IMG/M
3300018054\|Ga0184621_10033025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1664	Open in IMG/M
3300018056\|Ga0184623_10124891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1190	Open in IMG/M
3300018063\|Ga0184637_10797005	Not Available	504	Open in IMG/M
3300018071\|Ga0184618_10074921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1283	Open in IMG/M
3300018076\|Ga0184609_10132058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1141	Open in IMG/M
3300018078\|Ga0184612_10411803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	678	Open in IMG/M
3300018079\|Ga0184627_10133508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1315	Open in IMG/M
3300018433\|Ga0066667_10039453	All Organisms → cellular organisms → Bacteria	2747	Open in IMG/M
3300020003\|Ga0193739_1007045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3000	Open in IMG/M
3300020202\|Ga0196964_10558748	Not Available	562	Open in IMG/M
3300021073\|Ga0210378_10027442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2279	Open in IMG/M
3300021073\|Ga0210378_10302461	Not Available	601	Open in IMG/M
3300021080\|Ga0210382_10351361	Not Available	651	Open in IMG/M
3300021972\|Ga0193737_1011161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1228	Open in IMG/M
3300022534\|Ga0224452_1019164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1891	Open in IMG/M
3300022694\|Ga0222623_10285673	Not Available	634	Open in IMG/M
3300025901\|Ga0207688_10612270	Not Available	687	Open in IMG/M
3300025908\|Ga0207643_10201523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1212	Open in IMG/M
3300025910\|Ga0207684_10000362	All Organisms → cellular organisms → Bacteria	61367	Open in IMG/M
3300025917\|Ga0207660_10065969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2617	Open in IMG/M
3300025922\|Ga0207646_11043841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	721	Open in IMG/M
3300025927\|Ga0207687_11585491	Not Available	562	Open in IMG/M
3300025933\|Ga0207706_11659381	Not Available	516	Open in IMG/M
3300025934\|Ga0207686_10489536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	952	Open in IMG/M
3300025942\|Ga0207689_10178719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1750	Open in IMG/M
3300026480\|Ga0257177_1078453	Not Available	534	Open in IMG/M
3300026538\|Ga0209056_10174265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1609	Open in IMG/M
3300027454\|Ga0207623_103112	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	550	Open in IMG/M
3300027471\|Ga0209995_1008708	All Organisms → cellular organisms → Bacteria	1638	Open in IMG/M
3300027546\|Ga0208984_1004896	All Organisms → cellular organisms → Bacteria	2388	Open in IMG/M
3300027617\|Ga0210002_1069020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300027633\|Ga0208988_1013628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2055	Open in IMG/M
3300027637\|Ga0209818_1111799	Not Available	734	Open in IMG/M
3300027639\|Ga0209387_1064533	Not Available	834	Open in IMG/M
3300027669\|Ga0208981_1008599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2579	Open in IMG/M
3300027671\|Ga0209588_1234994	Not Available	563	Open in IMG/M
3300027678\|Ga0209011_1043343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1393	Open in IMG/M
3300027695\|Ga0209966_1128847	Not Available	584	Open in IMG/M
3300027738\|Ga0208989_10112038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	927	Open in IMG/M
3300027738\|Ga0208989_10257607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	567	Open in IMG/M
3300027846\|Ga0209180_10309122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	905	Open in IMG/M
3300027873\|Ga0209814_10003896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5603	Open in IMG/M
3300027873\|Ga0209814_10163070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	958	Open in IMG/M
3300027882\|Ga0209590_10092065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1795	Open in IMG/M
3300027886\|Ga0209486_10378761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	853	Open in IMG/M
3300027886\|Ga0209486_10394933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	838	Open in IMG/M
3300028380\|Ga0268265_10901262	Not Available	868	Open in IMG/M
3300028536\|Ga0137415_11445209	Not Available	511	Open in IMG/M
3300028708\|Ga0307295_10162734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	623	Open in IMG/M
3300028784\|Ga0307282_10132089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1175	Open in IMG/M
3300028819\|Ga0307296_10473148	Not Available	685	Open in IMG/M
3300028875\|Ga0307289_10134804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1014	Open in IMG/M
3300028875\|Ga0307289_10372900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	587	Open in IMG/M
3300028881\|Ga0307277_10148670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1015	Open in IMG/M
3300030997\|Ga0073997_11982457	Not Available	626	Open in IMG/M
3300030997\|Ga0073997_12192481	Not Available	854	Open in IMG/M
3300030998\|Ga0073996_12396724	Not Available	849	Open in IMG/M
3300031740\|Ga0307468_100549565	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	930	Open in IMG/M
3300031965\|Ga0326597_10461267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1395	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.43%
Host-Associated	Host-Associated	23.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.43%
Plants	Host-Associated → Plants	23.57%
Aquatic	Environmental → Aquatic	15.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.43%
Sediment	Environmental → Aquatic → Sediment	12.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.43%
Freshwater	Environmental → Aquatic → Freshwater	2.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.14%
Loam	Environmental → Terrestrial → Soil → Loam	12.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.57%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.14%
Sand	Environmental → Terrestrial → Soil → Sand	1.43%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.57%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.14%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.71%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.71%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	18.57%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	10.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	7.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.57%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.86%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.14%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.14%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.14%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.43%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.43%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.43%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.71%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.71%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.71%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009823	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012225	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT860_2	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021972	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026480	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-B	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027454	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G09K2-12 (SPAdes)	Environmental	Open in IMG/M
3300027471	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030997	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3B (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030998	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-3A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_100460673	3300001661	Forest Soil	MATTWEMIAVCFEDAVRAEDLVRELAFRRELRLDPQKALSAFELRSAKAAR*
Ga0062589_1011330592	3300004156	Soil	MATTWEMIAICMDDAVRAEDLARELAFRRELRIDPQKALSAFELRTKPAR*
Ga0062590_1021502312	3300004157	Soil	MATTWEMIAICIDDAVRAEDLARELAFRRELRIDPQKALSAFELRTKPAR*
Ga0063356_1011180262	3300004463	Arabidopsis Thaliana Rhizosphere	MSSTLELMAACIEDASRAEDLFSQLAFRRELRIDPQKALSAFELRPKSVRQR*
Ga0063356_1039185181	3300004463	Arabidopsis Thaliana Rhizosphere	ICMEDAVRAEDLVKELAFRRELRIDPQRALSAFELRAKPAR*
Ga0062595_1017092101	3300004479	Soil	MATTWEMIAICMDDAVRAEDLARELAFRRELRIDPQKALSAFELRAKPAR*
Ga0062594_1018376521	3300005093	Soil	TTWEMIAICMEDAVRAEDLVKELAFRRELRIDPQKALSAFELRAKPAR*
Ga0066674_100110864	3300005166	Soil	MATTWEMIAVCIEDAVRAEDLVRELAFRRELRLDPMKALSAFEIRSKPAR*
Ga0065704_105671962	3300005289	Switchgrass Rhizosphere	MATTWEMIAICMEDAVRAEDLVKELVFRRELRIDPQKALSAFELRAKPAR*
Ga0065715_101373802	3300005293	Miscanthus Rhizosphere	MATTWEMIAICMEDAVRAEDLVKELAFRRELRIDPQKALSAFELRAKPAR*
Ga0068869_1001402944	3300005334	Miscanthus Rhizosphere	MIAICMDDAVRAEDLARELAFRRELRIDPQKALSAFELRTKPAR*
Ga0070692_107099841	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	WEMIAICMDDAVRAEDLARELAFRRELRIDPQKALSAFELRTKPAR*
Ga0070675_1006691713	3300005354	Miscanthus Rhizosphere	LPERAPEVTEMATTWEMIAICMDDAVRAEDLARELAFRRELRIDPQKALSAFELRTKPAR
Ga0070701_103185342	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MATTWEMIAICMEDAVRAEDLVKELAFRRELRIDPQRALSAFELRAKPAR*
Ga0070705_1003827601	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSSTWELMVVCIEDAARAEDLVRELAFRRELRFDPQKALAAFELRAKPSR*
Ga0070706_1000006546	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MATTWEMIAVCLEDAVRAEDLVRELAFRRELRLDPLKALSAFQLRSKPER*
Ga0070679_1008979052	3300005530	Corn Rhizosphere	MATTWEMIAICMEDAVRAEDLARELTFRRELRIDPQKALSAFEVRAKPAR*
Ga0070697_1005494981	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	ERAPEVTEMATTWEMIAICMEDAVRAEDLVKELAFRRELRIDPQKALSAFELRAKPAR*
Ga0070695_1014527712	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	ATTWEMIAICMEDAVRAEDLVKELVFRRELRIDPQKALSAFELRAKPAR*
Ga0070704_1003048593	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	TWEMIAICMEDAVRAEDLVKELAFRRELRIDPQKALSAFELRAKPAR*
Ga0066707_104733052	3300005556	Soil	MATTWEMIAVCIEDAVRAEDLVRELAFRRELRLDPQKALSAFEIRSKPAR*
Ga0066700_106682642	3300005559	Soil	MATTWEMIAVCIEDAVRAEDLVRELAFRRELRLDPQRALSAFEIRSKPAR*
Ga0068859_1003965824	3300005617	Switchgrass Rhizosphere	MDDAVRAEDLARELAFRRELRIDPQKALSAFELRTKPAR*
Ga0068859_1007731662	3300005617	Switchgrass Rhizosphere	MATTWEMIAICMEDAVRAEDLVKELAFRRELHIDPQRALSAFELRAKPAR*
Ga0075417_100008757	3300006049	Populus Rhizosphere	MSSTWELMAVCTRDAARAEDLVRELAFRRELRLDPQKALAAFELRGKPAR*
Ga0075417_101046372	3300006049	Populus Rhizosphere	MCIDDAVRAEDLVRELAFRRQLRVDPQKALAAFELRRSKPAR*
Ga0075430_1001860811	3300006846	Populus Rhizosphere	MATTWELLAICLEDAVRAEDLVRELAFRRELRLDPQKALSA
Ga0075433_101543102	3300006852	Populus Rhizosphere	MATTWEMIAICMEDAVRAEDLVTELAFRRELRIDPQKALSAFELRAKPARRLT*
Ga0075433_102831761	3300006852	Populus Rhizosphere	AVRAEDLVRELAFLRELRLDPQKALSAFQLRSKPAR*
Ga0075420_1005754333	3300006853	Populus Rhizosphere	MATTWELLAICLEDAVRAEDLVRELAFRRELRLDPQKALSAFELRAKPSRQR*
Ga0079217_104594172	3300006876	Agricultural Soil	MSSTWELMTVCIQDAARAEDLAGELAFRRELRLDPQKALSAFELRAKPAR*
Ga0079215_101137002	3300006894	Agricultural Soil	MSSTWELMTVCIQDAARAEDLVKELAFRRELRLDPQKALSAFVLRAKPAR*
Ga0079215_113807412	3300006894	Agricultural Soil	TEVTEMSSTWELMTVCIQDAARAEDLAGELAFRRELRLDPQKALSAFELRAKPAR*
Ga0079216_101741852	3300006918	Agricultural Soil	MSSTWELMTVCNQDAARAEDLAGELAFRRELRLDPQKALSAFELRAKPAR*
Ga0079218_102688532	3300007004	Agricultural Soil	MSSTWELMTVCIQDAARAEDLAGELAFRRELRLDPQKALSAFELRAKPAVS*
Ga0079218_109209922	3300007004	Agricultural Soil	MSPHEGAEVKAMSSTWELMAICTRDAARAEDLVRELAFRRELRLDPQKALAAFELRAKPAR*
Ga0079218_113749371	3300007004	Agricultural Soil	MSSTWELMTVCIQDAARAEDLAGKLAFRRELRLDPQKALSAFELRAKPAR*
Ga0075435_1002972611	3300007076	Populus Rhizosphere	RAEDLVRELAFLRELRLDPQKALSAFQLRSKPAR*
Ga0099793_102687602	3300007258	Vadose Zone Soil	MATTWELMAICIEDAVRAEDLVRELAFRRELRLDPQKALSAFELRAKPAR*
Ga0066710_1003094902	3300009012	Grasslands Soil	MATTWEMIAVCIEDAVRAEDLVRELAFRRELRLDPQKALSAFEIRSKPAR
Ga0099829_100452664	3300009038	Vadose Zone Soil	MATTWEMIAVCLEDAVRAEDLVRELAFRRELRLDPQKALSAFELRSKPER*
Ga0105095_108154551	3300009053	Freshwater Sediment	MSSTWELMAICTRDAARAEDLVRELAFRRELRLDPQKALSAFELRGKPA
Ga0099830_116113912	3300009088	Vadose Zone Soil	MATTWELIAVCLEDAVRAEDLVRELAFRRELRLDPQKALSAFELRSKPER*
Ga0099828_113450602	3300009089	Vadose Zone Soil	CLEDAVRAEDLVRELAFRRELRLDPLKALSAFQLRSKPER*
Ga0099827_100582803	3300009090	Vadose Zone Soil	MSSQERTGVKEMATTWEMIAVCIEDAVRAEDLVRELAFRRDLRLDPQKALSAFEIRSKPAR*
Ga0114129_100402727	3300009147	Populus Rhizosphere	MTTTWELMAMCIDDAVRAEDLVRELAFRRQLRVDPQKALAAFELRRSKPAR*
Ga0105242_112394172	3300009176	Miscanthus Rhizosphere	MATTWEMIAICMEDAVRAEDLVKELAFRRELRIDPQKALSAFEVRAKPAR*
Ga0105078_10276952	3300009823	Groundwater Sand	MCTYEDAEVTAMSSTWELMVVCIQDAARAEDLVRELAFRRELRFDPQKALSAFELRAKPSR*
Ga0134124_106550881	3300010397	Terrestrial Soil	IAICMDDAVRAEDLARELAFRRELRIDPQKALSAFELRTKPAR*
Ga0134127_118572831	3300010399	Terrestrial Soil	VRAEDLVKELAFRRELRIDPQRALSAFELRAKPAR*
Ga0134122_100228902	3300010400	Terrestrial Soil	MATTWEMIAICMEDAVRAEDLVKELAFRRELRVDPQKALSAFELRAKPAR*
Ga0137388_105140921	3300012189	Vadose Zone Soil	MATTWEMIAVCLEDAVRAEDLVRELAFRRELRLDPLKALSAFQLHSKPER*
Ga0137399_101251873	3300012203	Vadose Zone Soil	MATTWELMAICIEDAVRAEDLVRELAFRRELRLDPQKALSAFELRSKPAR*
Ga0137399_101753164	3300012203	Vadose Zone Soil	TTWELMAICIEDAARADDLVKELAFRRELRLDPLKALAAFELRTRPDR*
Ga0137399_107653201	3300012203	Vadose Zone Soil	MATTWEMIAVCIEDAVRAEDLVRELAFRRELRLDPQKALSAFEIRSKLAR*
Ga0137374_100861984	3300012204	Vadose Zone Soil	MATTWEMIAICMEDAVRAEDLIKELAFRRELRIDPQKALSAFELRAKPAR*
Ga0137380_101843962	3300012206	Vadose Zone Soil	MATTWEMIAVCIEDAVRAEDLVRELAFRRELRLDPQKALSAFEIRSEPAR*
Ga0137434_10774491	3300012225	Soil	MCSYEDAEVTAMSSTWELLAVCTRDAARAEDLVRELAFRRELRFDPQKALSAFELRAKPSR*
Ga0137369_101384454	3300012355	Vadose Zone Soil	MATTWELISVCIDDAVRAEDLVRELAFRRDLRLDPQKALSAFELRRTKPER*
Ga0137369_107406103	3300012355	Vadose Zone Soil	MATTWELLAVCLEDALRAEDLVRELAFRRELRLDPQKALSAFEL
Ga0137369_108898952	3300012355	Vadose Zone Soil	MATTWEMIAICMDDAVRAEDLVKELAFRRELRIDPQKALSAFELRSKPAR*
Ga0137368_106871621	3300012358	Vadose Zone Soil	MATTWELLTICIDDAVRAEDLVRELAFRRELRLDPKKALEAFELRRTRSGR*
Ga0137375_111951251	3300012360	Vadose Zone Soil	MATTWELLTICIDDAVRAEDLVRELAFRRELRLDPKKALAAFELRRTRSGR*
Ga0137390_101648384	3300012363	Vadose Zone Soil	MATTWEMIAVCLEDAVRAEDLVRELAFRRELRLDPQKALSSFQLRSKPER*
Ga0137397_100234305	3300012685	Vadose Zone Soil	MATTGELMAICIEDAVRAEDLVRELAFRRELRLDPQKALSAFELRSKPAR*
Ga0137396_101108882	3300012918	Vadose Zone Soil	MATTWELMAICIEDAARADDLVKELAFRRELRLDPLKALAAFELRTRPDR*
Ga0137419_101272323	3300012925	Vadose Zone Soil	MATTWELMAICIEDAVRAEDLVRELAFRRELRLDPQKALSAFELR
Ga0137419_112775241	3300012925	Vadose Zone Soil	MATTWEMIAVCMEDAVRAEDLVRELAFRRDLRFDPQKALSAFKLRSTTSDR*
Ga0137419_117754772	3300012925	Vadose Zone Soil	MATTWEMIAVCIEDAVRAEDLVRELAFRRELRLDPQKALSAFELRSAKAAR*
Ga0157373_109701841	3300013100	Corn Rhizosphere	TEMATTWEMIAICMEDAVRAEDLAGELAFRRELRIDPQKALSAFEVRAKPAR*
Ga0132258_106656544	3300015371	Arabidopsis Rhizosphere	MATTWELMAVCIEDAKRAEDLVRELAFRRELRLDPQRALSAFELRAKQARQR*
Ga0132256_1001878912	3300015372	Arabidopsis Rhizosphere	MAGVTEMATTWELMAVCIEDAKRAEDLVRELAFRRELRLDPQRALSAFELRAKQARQR*
Ga0132255_1029465071	3300015374	Arabidopsis Rhizosphere	MAVCIEDAKRAEDLVRELAFRRELRLDPQGALSAFELRAKQARQR*
Ga0134074_12361021	3300017657	Grasslands Soil	MATTWEMIAVCIEDAVRAEDLVRELAFRRELRLDPMKALSAFEIR
Ga0184610_12678092	3300017997	Groundwater Sediment	MSSTWELMVVCIEDAARAEDLVRELAFRRELRLDPQKALSAFELRAKPAR
Ga0184605_100763672	3300018027	Groundwater Sediment	MATTWEMIAICMEDAVRAEDLVKELAFRRELRIDPQKALSAFELRSKPAR
Ga0184605_104686041	3300018027	Groundwater Sediment	MSSTWELMAVCMEDAARAEDLVRELAFRRELRFDPQKALAAFELRAKPAR
Ga0184608_100182472	3300018028	Groundwater Sediment	MATTWEMIAICMEDAVRAEDLVKELAFRRELRIDPQKALSAFELRAKPAR
Ga0184608_101042921	3300018028	Groundwater Sediment	MSSTWELMAVCMEDAARAEDLVRELAFRRELRLDPQKA
Ga0184608_101503112	3300018028	Groundwater Sediment	MATTWEMIAICMEDAVRAEDLVKELAFRRELRIVPQKALSAFELRAKPSR
Ga0184634_100743332	3300018031	Groundwater Sediment	MSSTWELMAICIEDAARAEDLVTEVAFRRELRLDPQKALSAFELRAKPAR
Ga0184621_100330252	3300018054	Groundwater Sediment	MATTWEMIAICMEDAVRAEDLVKELAFRREPRIDPQKALSAFELRAKPAR
Ga0184623_101248912	3300018056	Groundwater Sediment	MSNTWELMVVCIEDAARAEDLVRELAFRRELRLDPQKALSAFELRAKPAR
Ga0184637_107970052	3300018063	Groundwater Sediment	MSSTWELMAVCIEDAARAEDLVRELAFRRELRLDPQKALSAFELRAKPAR
Ga0184618_100749212	3300018071	Groundwater Sediment	MATTWEMIAICMEDAVRAEDLVKELAFRRELRIDPQKALSAFQLRSKPAR
Ga0184609_101320582	3300018076	Groundwater Sediment	MSSTWELMAVCTRDAARAEDLVRELAFRRELRLDPQKALAAFELTGKPAR
Ga0184612_104118031	3300018078	Groundwater Sediment	MSSTWELMVVCIEDAARAEDLVRELAFRRELRLDPQKALAAFELRAKPAR
Ga0184627_101335083	3300018079	Groundwater Sediment	MSSTWELMVVCIEDAARAEDLVRELAFRRELRLDPQKALSAFELRAK
Ga0066667_100394533	3300018433	Grasslands Soil	MATTWEMIAVCIEDAVRAEDLVRELAFRRELRLDPMKALSAFEIRSKPAR
Ga0193739_10070455	3300020003	Soil	MSSTWELMAICTRDAARAEDLVRELAFRRELRLDPQKALAAFELRGKPAR
Ga0196964_105587482	3300020202	Soil	MSNTWELMAVCIRDAQRAEDLARELVFRRELRRDPQKALAAFELRAETAR
Ga0210378_100274423	3300021073	Groundwater Sediment	MATTWEMIAICMGDAVRAEDLVKELAFRRELRIDPQKALSAFELRAKPAR
Ga0210378_103024612	3300021073	Groundwater Sediment	VCMEDAARAEDLVRELAFRRELRLDPQKALAAFELRGKPAR
Ga0210382_103513612	3300021080	Groundwater Sediment	MATTWELMAICIEDAVRAEDLVTELAFRRELRLDPQKALSAFELRAKPAR
Ga0193737_10111612	3300021972	Soil	MSSTWELMAICTRDAARAEDLVRELAFRRELRLDPQKALAAFELRGKPE
Ga0224452_10191644	3300022534	Groundwater Sediment	MATTWEMIAICMEDAVRAEDLVKELAFRRELRIDPQRALSAFELRAKPAR
Ga0222623_102856731	3300022694	Groundwater Sediment	MATTWEMIAICMEDAVRAEDLMKELAFRRELRIDPHKALSAFELRAKPAR
Ga0207688_106122702	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MATTWEMIAICMDDAVRAEDLARELAFRRELRIDPQKALSAFELRTKPAR
Ga0207643_102015232	3300025908	Miscanthus Rhizosphere	MATTWEMIAICMEDAVRAEDLARELTFRRELRIDPQKALSAFEVRAKPAR
Ga0207684_100003626	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MATTWEMIAVCLEDAVRAEDLVRELAFRRELRLDPLKALSAFQLRSKPER
Ga0207660_100659695	3300025917	Corn Rhizosphere	QERAPEVTEMATTWEMIAICMEDAVRAEDLARELTFRRELRIDPQKALSAFEVRAKPAR
Ga0207646_110438412	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VIEVATTWEMIAVCLEDAVRAEDLVRELAFRRELRLDPLKALSAFQLRSKPER
Ga0207687_115854911	3300025927	Miscanthus Rhizosphere	WEMIAICMEDAVRAEDLVKELAFRRELRIDPQRALSAFELRAKPAR
Ga0207706_116593812	3300025933	Corn Rhizosphere	PEVTEMATTWEMIAICMDDAVRAEDLARELAFRRELRIDPQKALSAFELRTKPAR
Ga0207686_104895362	3300025934	Miscanthus Rhizosphere	MATTWEMIAICMEDAVRAEDLVKELAFRRELRIDPQKALSAFEVRAKPAR
Ga0207689_101787191	3300025942	Miscanthus Rhizosphere	PEIAICMDDAVRAEDLARELAFRRELRIDPQKALSAFELRTKPAR
Ga0257177_10784531	3300026480	Soil	VCLEDAVRAEDLVRELAFRRELRLDPQKALSAFELRSKPER
Ga0209056_101742651	3300026538	Soil	MATTWEMIAVCIEDAVRAEDLVRELAFRRELRLDPMKALSAFEIRSTPAR
Ga0207623_1031122	3300027454	Soil	DAVRAEDLARELAFRRELRIDPQKALSAFELRTKPAR
Ga0209995_10087082	3300027471	Arabidopsis Thaliana Rhizosphere	MSSTWELMVVCIEDAARAEDLMRQLAFRRELRLDPQKALSAFELRKKPAR
Ga0208984_10048963	3300027546	Forest Soil	MATTWEMIAVCFEDAVRAEDLVRELAFRRELRLDPQKALSAFELRSAKAAR
Ga0210002_10690203	3300027617	Arabidopsis Thaliana Rhizosphere	MSSTWELMAVCIEDAARAEDLVKELAFRRELRLDPQKALSAFELRRKP
Ga0208988_10136284	3300027633	Forest Soil	MATTWEMIAVCFEDAVRAEDLVRELAFRRELRLDPQKALSAF
Ga0209818_11117992	3300027637	Agricultural Soil	MSSTWELMTVCIQDAARAEDLAGELAFRRELRLDPQKALSAFELRAKPAR
Ga0209387_10645332	3300027639	Agricultural Soil	MSSTWELMTVCIQDAARAEDLVKELAFRRELRLDPQKALSAFVLRAKPAR
Ga0208981_10085995	3300027669	Forest Soil	MATTWEMIAVCFEDAVRAEDLVRELAFRRELRLDPQKALSAFELRSTKAAR
Ga0209588_12349942	3300027671	Vadose Zone Soil	MATTWEMIAVSLRDAVRAEDLVCELAFRRELRLDPQKALSAFQLRSKPER
Ga0209011_10433432	3300027678	Forest Soil	MATTWEMVAICMEDAVRAEDLVRELAFRRDLRLDPQKALSAFKLRSTKPER
Ga0209966_11288472	3300027695	Arabidopsis Thaliana Rhizosphere	MSSTWELMAICTRDAARAEDLVRELAFRRELRLDPQKALSAFELRKKPAR
Ga0208989_101120381	3300027738	Forest Soil	MATTWEMIATCIEDAVRAEDLVRELAFRRDLRFDPQKALSAFKLRSTTSDR
Ga0208989_102576071	3300027738	Forest Soil	MATTWEMIAVCFEDAVRAEDLVRELAFRRELRLDPQKALSAFELRSAK
Ga0209180_103091222	3300027846	Vadose Zone Soil	MATTWEMIAVCLEDAVRAEDLVRELAFRRELRLDPQKALSAFELRSKPER
Ga0209814_100038964	3300027873	Populus Rhizosphere	MSSTWELMAVCTRDAARAEDLVRELAFRRELRLDPQKALAAFELRGKPAR
Ga0209814_101630702	3300027873	Populus Rhizosphere	MCIDDAVRAEDLVRELAFRRQLRVDPQKALAAFELRRSKPAR
Ga0209590_100920652	3300027882	Vadose Zone Soil	MATTWEMIAVCIEDAVRAEDLVRELAFRRDLRLDPQKALSAFEIRSKPAR
Ga0209486_103787613	3300027886	Agricultural Soil	HRTKMAEVTEMSSTWELVTVCMQDAARAEDLAGELAFRRELRLDPQKALSAFELRAKPAV
Ga0209486_103949332	3300027886	Agricultural Soil	MSSTWELMTVCIQDAARAEDLAGELAFRRELRLDPQKALSAFELRAKPAVS
Ga0268265_109012622	3300028380	Switchgrass Rhizosphere	MATTWEMIAICMDDAVRAEDLARELAFRRELRIDPQKALSAFELRAKPAR
Ga0137415_114452092	3300028536	Vadose Zone Soil	VTEMATTWELMAICIEDAVRAEDLVRELAFRRELRLDPQKALSAFELRSKPAR
Ga0307295_101627342	3300028708	Soil	MATTWEMIAICMEDAVRAEDLVKELAFRRELRIDPQKALSAFELRAKPAP
Ga0307282_101320893	3300028784	Soil	RDLQERAPEVTEMATTWEMIAICMEDAVRAEDLVKELAFRRELRIDPQKALSAFELRAKPAR
Ga0307296_104731481	3300028819	Soil	SSPERAPEVTEMATTWEMIAICMEDAVRAEDLMKELAFRRELRIDPHKALSAFELRAKPA
Ga0307289_101348042	3300028875	Soil	MATTWEMIAICMEDAVRAEDLVKELAFRRELRIDPQKALSAFELRA
Ga0307289_103729002	3300028875	Soil	RGWPRRGEMIAICMEDAVRAEDLVKELAFRRELRIDPQKALSAFELRAKPAP
Ga0307277_101486701	3300028881	Soil	MEDAVRAEDLARELAFRRELRIDPQKALSAFELRAKPAR
Ga0073997_119824571	3300030997	Soil	EMATTWEMITVCIQDAVRAEDLVRELAFRRELRLDPQKALSAFELRHAKPSR
Ga0073997_121924812	3300030997	Soil	EMATTWEMIAVSFEDAVRAENLVEELAFRRELRLDPQKALSAFELRSTKAAR
Ga0073996_123967243	3300030998	Soil	GGTEMATTWEMIAVSFEDAVRAENLVEELAFRRELRLDPQKALSAFELRSTKAAR
Ga0307468_1005495652	3300031740	Hardwood Forest Soil	MATTWEMIAMCMEDAVRAEDLTRELVFRRELRIDPQKALSAFELRAKPAR
Ga0326597_104612673	3300031965	Soil	MCSYEDAEVTAMSSTWELMAICTRDAARAEDLVRELAFRRELRLDPQKALSAFELRAKPS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053863

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences