Metagenome Family F053917

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F053917
Family Type	Metagenome
Number of Sequences	140
Average Sequence Length	59 residues
Representative Sequence	MVEHPLAFEFSKTRTICDAFDEAWAFLQGLGSDLTQAPKSLATQTILAKRIIEMAHQGL
Number of Associated Samples	99
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.00 %
% of genes near scaffold ends (potentially truncated)	95.71 %
% of genes from short scaffolds (< 2000 bps)	94.29 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.571 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (36.429 % of family members)
Environment Ontology (ENVO)	Unclassified (52.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.857 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.28% β-sheet: 0.00% Coil/Unstructured: 51.72%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF04191	PEMT	1.43
PF02913	FAD-oxidase_C	1.43
PF03401	TctC	0.71
PF00248	Aldo_ket_red	0.71
PF13374	TPR_10	0.71
PF01548	DEDD_Tnp_IS110	0.71
PF00044	Gp_dh_N	0.71
PF04392	ABC_sub_bind	0.71
PF07508	Recombinase	0.71
PF01068	DNA_ligase_A_M	0.71
PF00346	Complex1_49kDa	0.71
PF04228	Zn_peptidase	0.71
PF00872	Transposase_mut	0.71
PF00126	HTH_1	0.71
PF13424	TPR_12	0.71
PF07681	DoxX	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	1.43
COG0057	Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase	Carbohydrate transport and metabolism [G]	0.71
COG0649	NADH:ubiquinone oxidoreductase 49 kD subunit (chain D)	Energy production and conversion [C]	0.71
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.71
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.71
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.71
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.71
COG2321	Predicted metalloprotease	General function prediction only [R]	0.71
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.71
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.71
COG3261	Ni,Fe-hydrogenase III large subunit	Energy production and conversion [C]	0.71
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.71
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.71
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.57 %
Unclassified	root	N/A	1.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.57 %
Unclassified	root	N/A	1.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.57 %
Unclassified	root	N/A	1.43 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	94.29 %
Unclassified	root	N/A	1.43 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	92.86 %
Unclassified	root	N/A	1.43 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	3.57 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.57 %
Unclassified	root	N/A	1.43 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.57 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.14 %
Unclassified	root	N/A	1.43 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.57 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.14 %
Unclassified	root	N/A	1.43 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.57 %
Unclassified	root	N/A	1.43 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3.57 %
Unclassified	root	N/A	1.43 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.71 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10025344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1616	Open in IMG/M
3300002906\|JGI25614J43888_10017472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2304	Open in IMG/M
3300002906\|JGI25614J43888_10196580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	546	Open in IMG/M
3300005177\|Ga0066690_11046984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	510	Open in IMG/M
3300005332\|Ga0066388_103386141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	814	Open in IMG/M
3300005332\|Ga0066388_107072186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	564	Open in IMG/M
3300005435\|Ga0070714_100071210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3006	Open in IMG/M
3300005445\|Ga0070708_100187802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1933	Open in IMG/M
3300005445\|Ga0070708_102235686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	505	Open in IMG/M
3300005576\|Ga0066708_10508686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	776	Open in IMG/M
3300005598\|Ga0066706_10272210	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300005713\|Ga0066905_100594534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	936	Open in IMG/M
3300005713\|Ga0066905_100781730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	826	Open in IMG/M
3300005713\|Ga0066905_100946617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	756	Open in IMG/M
3300005764\|Ga0066903_101506673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1270	Open in IMG/M
3300005764\|Ga0066903_101643906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1220	Open in IMG/M
3300005764\|Ga0066903_102258138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	1050	Open in IMG/M
3300005764\|Ga0066903_102865119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	935	Open in IMG/M
3300005764\|Ga0066903_105753120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	651	Open in IMG/M
3300006797\|Ga0066659_10287516	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300007788\|Ga0099795_10650724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300009012\|Ga0066710_103002575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	657	Open in IMG/M
3300009137\|Ga0066709_100951886	Not Available	1254	Open in IMG/M
3300009147\|Ga0114129_12488918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	619	Open in IMG/M
3300009156\|Ga0111538_13101296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300009792\|Ga0126374_10825533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	711	Open in IMG/M
3300010043\|Ga0126380_12251778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	505	Open in IMG/M
3300010046\|Ga0126384_11950818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300010047\|Ga0126382_10025670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3149	Open in IMG/M
3300010047\|Ga0126382_10552808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	937	Open in IMG/M
3300010048\|Ga0126373_12358508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	592	Open in IMG/M
3300010325\|Ga0134064_10309729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	604	Open in IMG/M
3300010337\|Ga0134062_10127304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1115	Open in IMG/M
3300010358\|Ga0126370_11046505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	748	Open in IMG/M
3300010359\|Ga0126376_11795351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	651	Open in IMG/M
3300010359\|Ga0126376_12880737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	531	Open in IMG/M
3300010359\|Ga0126376_12993468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300010376\|Ga0126381_100693996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1455	Open in IMG/M
3300010376\|Ga0126381_102039845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	826	Open in IMG/M
3300010398\|Ga0126383_10464925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1317	Open in IMG/M
3300010398\|Ga0126383_12500760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300012358\|Ga0137368_10959988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300012359\|Ga0137385_10715571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	836	Open in IMG/M
3300012360\|Ga0137375_10131762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2477	Open in IMG/M
3300012362\|Ga0137361_11835026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300012515\|Ga0157338_1072906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	540	Open in IMG/M
3300012939\|Ga0162650_100016972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1012	Open in IMG/M
3300012960\|Ga0164301_11310209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300012961\|Ga0164302_11661671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300012971\|Ga0126369_11693061	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	722	Open in IMG/M
3300012971\|Ga0126369_11929081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	679	Open in IMG/M
3300012987\|Ga0164307_10709932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	789	Open in IMG/M
3300013306\|Ga0163162_12560087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300014166\|Ga0134079_10628549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	538	Open in IMG/M
3300016270\|Ga0182036_10557962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	914	Open in IMG/M
3300016270\|Ga0182036_11762808	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	524	Open in IMG/M
3300016294\|Ga0182041_10667752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	919	Open in IMG/M
3300016294\|Ga0182041_10894537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	798	Open in IMG/M
3300016319\|Ga0182033_11505257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	607	Open in IMG/M
3300016319\|Ga0182033_12191304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300016341\|Ga0182035_10071915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2438	Open in IMG/M
3300016387\|Ga0182040_11262441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	623	Open in IMG/M
3300016422\|Ga0182039_11708488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	576	Open in IMG/M
3300016445\|Ga0182038_10074458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2372	Open in IMG/M
3300021560\|Ga0126371_11793477	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	735	Open in IMG/M
3300021560\|Ga0126371_12017515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	694	Open in IMG/M
3300021560\|Ga0126371_12697191	All Organisms → cellular organisms → Bacteria → Proteobacteria	602	Open in IMG/M
3300025934\|Ga0207686_11338786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	588	Open in IMG/M
3300026304\|Ga0209240_1266256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	526	Open in IMG/M
3300026320\|Ga0209131_1407325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300026528\|Ga0209378_1238195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	579	Open in IMG/M
3300027748\|Ga0209689_1306382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	614	Open in IMG/M
3300028755\|Ga0307316_10158288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	809	Open in IMG/M
3300028793\|Ga0307299_10048874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1558	Open in IMG/M
3300028876\|Ga0307286_10052949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1379	Open in IMG/M
3300031545\|Ga0318541_10650172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	589	Open in IMG/M
3300031564\|Ga0318573_10231531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	983	Open in IMG/M
3300031564\|Ga0318573_10763314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	519	Open in IMG/M
3300031572\|Ga0318515_10299396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	862	Open in IMG/M
3300031680\|Ga0318574_10185780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1191	Open in IMG/M
3300031681\|Ga0318572_10800698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	560	Open in IMG/M
3300031681\|Ga0318572_10891644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	528	Open in IMG/M
3300031723\|Ga0318493_10527169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300031723\|Ga0318493_10569657	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	630	Open in IMG/M
3300031724\|Ga0318500_10112654	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300031736\|Ga0318501_10099486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1449	Open in IMG/M
3300031736\|Ga0318501_10191778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1067	Open in IMG/M
3300031736\|Ga0318501_10487389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	671	Open in IMG/M
3300031740\|Ga0307468_101346331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	653	Open in IMG/M
3300031744\|Ga0306918_10892621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	692	Open in IMG/M
3300031763\|Ga0318537_10240524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	672	Open in IMG/M
3300031765\|Ga0318554_10815978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	521	Open in IMG/M
3300031768\|Ga0318509_10291070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	913	Open in IMG/M
3300031768\|Ga0318509_10305274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	890	Open in IMG/M
3300031768\|Ga0318509_10414230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	753	Open in IMG/M
3300031770\|Ga0318521_10578159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	678	Open in IMG/M
3300031792\|Ga0318529_10364873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	672	Open in IMG/M
3300031794\|Ga0318503_10109189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	881	Open in IMG/M
3300031795\|Ga0318557_10180238	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	961	Open in IMG/M
3300031797\|Ga0318550_10416099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	650	Open in IMG/M
3300031798\|Ga0318523_10076778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1613	Open in IMG/M
3300031798\|Ga0318523_10222517	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300031805\|Ga0318497_10610959	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300031819\|Ga0318568_10206302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1213	Open in IMG/M
3300031819\|Ga0318568_10834027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300031821\|Ga0318567_10363367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	819	Open in IMG/M
3300031845\|Ga0318511_10427706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300031845\|Ga0318511_10510915	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300031846\|Ga0318512_10654275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	537	Open in IMG/M
3300031880\|Ga0318544_10047695	Not Available	1538	Open in IMG/M
3300031896\|Ga0318551_10407666	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	773	Open in IMG/M
3300031897\|Ga0318520_10596389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	686	Open in IMG/M
3300031910\|Ga0306923_10436252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1487	Open in IMG/M
3300031945\|Ga0310913_10158944	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300031946\|Ga0310910_10447980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1024	Open in IMG/M
3300031946\|Ga0310910_11116788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	613	Open in IMG/M
3300031947\|Ga0310909_10129541	All Organisms → cellular organisms → Bacteria → Proteobacteria	2057	Open in IMG/M
3300031947\|Ga0310909_10999219	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	683	Open in IMG/M
3300031954\|Ga0306926_11915984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	669	Open in IMG/M
3300031981\|Ga0318531_10235901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	825	Open in IMG/M
3300032001\|Ga0306922_10415624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1440	Open in IMG/M
3300032001\|Ga0306922_10772357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1006	Open in IMG/M
3300032001\|Ga0306922_11170726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	784	Open in IMG/M
3300032001\|Ga0306922_11236805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	758	Open in IMG/M
3300032001\|Ga0306922_11275512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	744	Open in IMG/M
3300032035\|Ga0310911_10651678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	610	Open in IMG/M
3300032039\|Ga0318559_10118984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1183	Open in IMG/M
3300032042\|Ga0318545_10141298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	853	Open in IMG/M
3300032043\|Ga0318556_10580015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300032055\|Ga0318575_10629771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300032060\|Ga0318505_10033702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2110	Open in IMG/M
3300032065\|Ga0318513_10513633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300032065\|Ga0318513_10664378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300032076\|Ga0306924_10948317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	948	Open in IMG/M
3300032076\|Ga0306924_11619789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	681	Open in IMG/M
3300032261\|Ga0306920_101825284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	857	Open in IMG/M
3300032261\|Ga0306920_102512198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	708	Open in IMG/M
3300032261\|Ga0306920_102803550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300033290\|Ga0318519_10123507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1420	Open in IMG/M
3300033290\|Ga0318519_10210454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1112	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.43%
Host-Associated	Host-Associated	3.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.43%
Plants	Host-Associated → Plants	3.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.43%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.43%
Loam	Environmental → Terrestrial → Soil → Loam	9.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.43%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	54.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.43%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	36.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.29%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.43%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.71%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100253441	3300000597	Forest Soil	MAENPLAFAFSKTHTICDAFDEAWAFLQGLGSDLTQAPKSLATQTILAKRIIEMA
JGI25614J43888_100174723	3300002906	Grasslands Soil	MVETPLAFDLSKTGTVCDAFDGAWAILQGVGSDLTEPSKSLALRTILAKRIIVRAGSAP*
JGI25614J43888_101965801	3300002906	Grasslands Soil	VIVENPLAFDFSKTRTICDAFDEAWAFLQGLGSDLTDASNSLATQTILAKRITEMADQGLTD
Ga0066690_110469842	3300005177	Soil	MVETPLAFDLSKTRTICDAFDDAWAYLQSVGSDLTEPSKSLASRTILAKRIIEMAD
Ga0066388_1033861411	3300005332	Tropical Forest Soil	MVENPLAFDFSKTRTICVAFDEAWAVLQGLYSELTDASKSVATRTILAKRIIEMADQGLADV
Ga0066388_1070721863	3300005332	Tropical Forest Soil	MVKTPLAFEFSKTRTICDAFDEAWALLQGVGSDLTAPSKSLASRTILAKRIIEMADQGLM
Ga0070714_1000712103	3300005435	Agricultural Soil	MDENLLAFEFSKTRTICDAFDEAWAFLQGLGSDLAEAPKSLATQTILAKRI
Ga0070708_1001878023	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDENPLAFEFSKTRTICDAFDQAWAFLQGLGSDLTQAPKSLATQTILAKRIIEMADQG
Ga0070708_1022356861	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MVETPLAFDLSKTGTVCDAFDGAWAILQGVGSDLTEPSKSLASRTILAKRIIEMADQGL
Ga0066708_105086861	3300005576	Soil	MVETPLAFDFNNTRTVCDAFDDAWAFLQGVGSDLTEPSKSLASRTILAKRI
Ga0066706_102722101	3300005598	Soil	MVETPLAFDFNKTRTVCDAFDDAWAFLQGLGITDATRTMLAKRIIEMADQG
Ga0066905_1005945341	3300005713	Tropical Forest Soil	MVKTPLAFEFSKTRMICDAFDEAWALLQGVGSDLTAPSKSLASRTILAKRI
Ga0066905_1007817301	3300005713	Tropical Forest Soil	MVENPLAFNFSKTRTICDAFDDTWTLLQVLGSDLTQAPKSLATQTILAKRIIEMADQGLR
Ga0066905_1009466171	3300005713	Tropical Forest Soil	MVETPLAFDFNKTRTICDAFDDAWVFLQGVGSDLTEPSKSLASRTILAKRIIEMADQGLM
Ga0066903_1015066732	3300005764	Tropical Forest Soil	MVENPLAFEFSKTRTICDAFDEAWAFLQGLGRDLTQAPKSLATQTILAKRIIEMADQ
Ga0066903_1016439062	3300005764	Tropical Forest Soil	VIVENPLAFDFSKTRTICDAFDEAWAFLQGLGSDLTDASNSLATQTILAKRIIEMAD
Ga0066903_1022581383	3300005764	Tropical Forest Soil	MLENPLAFEFTKTRTICDAFDETWAFLQGLGSDLTQAPKSLATQTILAKRIIEMADQGLRDIPELRDD
Ga0066903_1028651192	3300005764	Tropical Forest Soil	MVENPLAFEFSKTRTICDAFDEAWAFLQGLGSDLTEPSNSLATQTILAKRIIE
Ga0066903_1057531202	3300005764	Tropical Forest Soil	MVENLLAFNFSKTRTICVAFDEAWAFLQGLGSELTDASKSVATRTILAKRIIEMADQGLKEVP
Ga0066659_102875161	3300006797	Soil	MVETPLAFDLSKTRTICDAFDDAWAFLQSVGSDLTEPSKSLESRTILAKRIIEMADSG
Ga0099795_106507241	3300007788	Vadose Zone Soil	MDENPLAFEFSKTRTICDAFDEAWAFLQGLGSDLTEPSNSLATQTILAK
Ga0066710_1030025752	3300009012	Grasslands Soil	MDENPLAFEFSKTRTICDAFDEAWAFLQNLGDLTEPPKSLAARTILAKRIIEMAD
Ga0066709_1009518861	3300009137	Grasslands Soil	MVETPLAFDLSKTRTICDAFDDAWAFLQSVGSDLTEPSKSLESRTILAKRIIEMADHGLMHVTELRDD
Ga0114129_124889181	3300009147	Populus Rhizosphere	MVENPLAFEFTKTRTICDAFDEAWAFLQNLGSDLTEPSNALATQSILAR
Ga0111538_131012961	3300009156	Populus Rhizosphere	MVENPLAFNFSRTRTICVAFDEAWAFLQGLGSELTDASKSVATRTILAKRIIEMADQGLK
Ga0126374_108255331	3300009792	Tropical Forest Soil	MAENPLAFAFSKTHTMCDAFDEAWAFLQGLGSDLTQAPKSLATQTILAKRIIEMA
Ga0126380_122517781	3300010043	Tropical Forest Soil	MVKTPLAFEFSKTRTICDAFDEAWALLQGVGSDLTAPSNSLASRTILAKRIIEMADQGLMDVTQLR
Ga0126384_119508181	3300010046	Tropical Forest Soil	MVENPLAFEFSKTHTVCDAFDEAWAFLKGLGSDLTQAPKSLATQTILAKRIIEMADQGLT
Ga0126382_100256701	3300010047	Tropical Forest Soil	MVKTPLAFEFSKTRAICDAFDDAWALLQGLGSDLTQVPKSLATQTILAKRIIEMADQGLRDIPAL
Ga0126382_105528082	3300010047	Tropical Forest Soil	MVENPLAFEFSKTRTICDAFDEAWAFLQGLGRDLTQAPKSLATQERIEREMVR
Ga0126373_123585081	3300010048	Tropical Forest Soil	MVETPLTFDFNNTRMVCDAFDDAWAFLRDMGSDLTAPSKSRASRTILAKRIIEMADQGLM
Ga0134064_103097292	3300010325	Grasslands Soil	MVETPLAFDFNKTRTVCDAFDDAWACLQGVGSDLTEPSKSLASRTILAKRIIEMADQGLMDVTE
Ga0134062_101273041	3300010337	Grasslands Soil	MVETPLAFDFNKTRTVCDAFDDAWACLQGVGSDLTEPSKSLASRTILAKRII
Ga0126370_110465051	3300010358	Tropical Forest Soil	MVENPLAFEYSKTRRICDAFDDAWAFLQDLGSDLTDASKSLATRTILAKRIIEMADQGLTDV
Ga0126376_117953511	3300010359	Tropical Forest Soil	MVENPLAFNFSKTRTICVAFDEAWAFLQGLGSELTDASKSVATRTILAKRII
Ga0126376_128807371	3300010359	Tropical Forest Soil	MVENPLAFDFSKTRTICDAFDEAWAFLQGLGSDLTEPSNSLATQTILAKRIIEMADQGLMDVTE
Ga0126376_129934681	3300010359	Tropical Forest Soil	MVENPLAFEFSKTRTICDAFDEAWVFLQGLGSDLTQAPKSLATRTILAKRIIEVADQ
Ga0126381_1006939962	3300010376	Tropical Forest Soil	MVEHPLAFEFSKTRTICDAFDEAWAFLQGLGSDLTQAPKSLATQTILAKRIIEMAHQGLMDVPELR
Ga0126381_1020398451	3300010376	Tropical Forest Soil	MVENPLAFEFSKTRTICEAFDEAWALLQDLGSDLTQAPKSLATRTILAKRIIEMANQGLRDIPK
Ga0126383_104649251	3300010398	Tropical Forest Soil	MDENPLAFEFSKTRTVCDAFDQAWAFLQDLGSDLTEPPKSLAARTILAKRIIEMADQ
Ga0126383_125007601	3300010398	Tropical Forest Soil	MDENPLAFEFSKTRTICDAFDQAWAFLQDLGSDLTEPPKSLAARTILAKRIIEMADQALM
Ga0137368_109599881	3300012358	Vadose Zone Soil	MVETLLAFDLSKTRTVCDAFDDAWAFLQGSGSDLTEPSKSLESRTILAKRIIEMADHG
Ga0137385_107155711	3300012359	Vadose Zone Soil	MVEHPLAFEFSKTRTICDAFDEAWAFLQGLGSDLTQAPKSLATQTILAKRIIEMAHQGL
Ga0137375_101317624	3300012360	Vadose Zone Soil	MFNFSKTRTVCDAFDDAWAFLQCIGSDVTEPSKSLASRRMLAKRITEMADQA*
Ga0137361_118350262	3300012362	Vadose Zone Soil	MVENPLAFSFSKTRTICDAFDEAWAFLQGLGSDLTDASKSSATRTILAKRIIEMADQG
Ga0157338_10729061	3300012515	Arabidopsis Rhizosphere	MVQSPLAFDFSKTRAICDAFDDAWAFLQGGSSVLTEPSKSLATRTILAKRIIETADQGLTDV
Ga0162650_1000169723	3300012939	Soil	MVETPLAFSFSKTCTICDAFDDAWAFLQGLGSDLTEASRSLATRTILAKRIIEMADQGLTDVRELRD
Ga0164301_113102091	3300012960	Soil	MVQSPLAFDFSKTRAICDAFDDAWAFLQGGSSVLTEPSKSLATRTILAKRIIETADQGLTDVLELRADALA
Ga0164302_116616711	3300012961	Soil	MVQSPLAFDFSKTRAICDAFDDAWAFLQGGSSVLTEPSKSLATRTILAKRIIETADQGLTDVLELRADALAFLGRIRPPT
Ga0126369_116930612	3300012971	Tropical Forest Soil	VIVENPLAFDFSKTRTICDAFDEAWAFLQGLGSDLTDASNSLATQTILAKRIIEMADRGL
Ga0126369_119290811	3300012971	Tropical Forest Soil	MVENPLAFESSKTRRICDAFDDAWAFLQGLGSDLTDASKSLATRTILASRIIEMADQGLTYVAELRDNAL
Ga0164307_107099321	3300012987	Soil	MVENPLAFEFSKTRTICDAFDETWAFLQGLGSDFTEASKSFATRTILAKRIIEMADQGLRGIV
Ga0163162_125600871	3300013306	Switchgrass Rhizosphere	MVENPLAFEFSKTRTICDAFDKAWAFLQGLGSDLAAAPKSLATQTILAKRL
Ga0134079_106285492	3300014166	Grasslands Soil	MVETPLAFDLSKTRTICDAFDDAWAFLQSVGSDLTEPSKSRTILAKRIIEMADQGLMDV
Ga0182036_105579621	3300016270	Soil	MFKTPLAFDFSKTRTVCDAFDDAWTFLQGVGSDLTEPSKSLASRTILAKRIIEMADRGLV
Ga0182036_117628081	3300016270	Soil	MVENPLAFNFSKTRTICVAFDEAWAFLQGLGSELTDASKSVATRTILAKRI
Ga0182041_106677521	3300016294	Soil	MVENPLAFESSKTRRICDAFDDAWAFLQGLGSDVTDASKSLATRTILAKRIIEMADQGLTDVAELRDN
Ga0182041_108945371	3300016294	Soil	MFKTPLAFDFSKTRTVCDAFDDAWTFLQGVGSDLTEPSKSLASRTILAKRIIEMADRGLVDVTEL
Ga0182033_115052571	3300016319	Soil	MVENPLAFNFSKTRTICVAFDEAWAFLQGLGSELTDASKSVATRTILAKRIIEMADQG
Ga0182033_121913041	3300016319	Soil	MVENPLAFNLSKTRTICDAFDDAWAFLQGLGSDLTQAPKSLATQTILAKRIIEMAD
Ga0182035_100719151	3300016341	Soil	MVENPLAFAFSRTRKICDAFDEAWAFLQGLGSDLTQAPKSLATQTIVAKRIIEMADQGLMDVTELRDD
Ga0182040_112624411	3300016387	Soil	MVENPLAFNFSKTRTICDAFDDAWTLLQGLGSDLTQAPKSLATQTILAKRIIEMADQGLRDIPAL
Ga0182039_117084881	3300016422	Soil	MVENPLAFEFSKTHTICDAFDEAWAFLQGLGSELTDASKSVATRTILAKRII
Ga0182038_100744584	3300016445	Soil	MVENPLAFAFSRTRKICDAFDEAWAFLQGLGSDLTQAPKSLATQTIVAKRIIDG
Ga0126371_117934771	3300021560	Tropical Forest Soil	MVENPLAFDFSKTRTICDAFDAAWAFLQGLGSDLTQAPKSLAAQSILAKRIIEMADQGLRDIPA
Ga0126371_120175151	3300021560	Tropical Forest Soil	MVENLLAFNFSKTRTICVAFDEAWAFLQRLGSELTDASKSVGTRTILAKRIIEMADQGLKEVPE
Ga0126371_126971912	3300021560	Tropical Forest Soil	MVETPLAFDFNKTRTICDAFDDAWVFLQGVGSDLTEPSKSLASRTILAKRIIEMAD
Ga0207686_113387861	3300025934	Miscanthus Rhizosphere	MVENPLAFEFSKTRTICDAFDEAWAFLQNLGTDLAEPSNAHATQTILAKRIIEMADQELMDVTEL
Ga0209240_12662561	3300026304	Grasslands Soil	VIVENPLAFDFSKTRTICDAFDDAWAFLQGVGSDLTEPSKSLASRTILAKRII
Ga0209131_14073251	3300026320	Grasslands Soil	MVQTPLAFDFTKTRTICDAFDNAWAFLQGVGSDLTEPCNSLASRTILAKRI
Ga0209378_12381951	3300026528	Soil	MVETPLAFDFNKTRTVCDAFDDAWACLQGVGSDLTEPSKSLASRTILAKRIIEMADQGL
Ga0209689_13063822	3300027748	Soil	MVETPLAFNFSKTRTVCDAFDNAWAFLQGIGSDLTEPCNSLASRTILAKRIVHMADKGLRDVTEL
Ga0307316_101582881	3300028755	Soil	MVQSPLAFDTGKTRMICDAFDGAWAYLQGVGSDLTDPSKSLAARTILAKRVIE
Ga0307299_100488741	3300028793	Soil	MVQTPLAFDFSKTRTICDAFDDAWAFLQARGSDFTEASNSLATRTILAKRIIEMADHGLTDVRKLRD
Ga0307286_100529492	3300028876	Soil	MVQSPLAFDTGKTRMICDAFDGAWAYLQGVGSDLTDPSKSLAARTILA
Ga0318541_106501721	3300031545	Soil	MVENPLAFDFSKTRTICDAFDAAWAFLQGLGSDLTQAPKSLAAQSILAKRITE
Ga0318573_102315311	3300031564	Soil	MVEHPLAFEFSKTRTICDAFDEAWAFLQGLGSDLTQAPKSLATQTILAKRIIEMAHIRA
Ga0318573_107633141	3300031564	Soil	MVENPLAFEFSKTRTICDAFDEAWAFLQGLGSNLTEPSNSLATQTILAKRIIELADQGLRDI
Ga0318515_102993962	3300031572	Soil	MSGMVKTPLAFEFSKTRTICDAFDEAWALLQGLGSDLTQAPKSLATQTILAKRIIE
Ga0318574_101857801	3300031680	Soil	MVENPLAFEFSKTRTICDAFDEAWAFLQGLGSNLTEPSNSLATQTILAKRIIELADQG
Ga0318572_108006981	3300031681	Soil	MVENPLAFNFSKTRAICDAFDEAWAFLQGLGNDLTQTSKSLATQTILAKRIIEMADQ
Ga0318572_108916441	3300031681	Soil	MVEHPLAFEFSKTRTICDAFDEAWAFLQGLGSDLTQAPKSLATQTILAKRI
Ga0318493_105271692	3300031723	Soil	MSGMVKTPLAFEFSKTRTICDAFDEAWALLQGLGSDLTQAPKSLATQTILAKRIIEMTDQGLRDIPE
Ga0318493_105696571	3300031723	Soil	MVENPLAFNFSKTRTICDAFDDTWTLLQVLGSDLTQAPKSLATQTILAKRIIEMADQGLRDIPELRDDAL
Ga0318500_101126541	3300031724	Soil	MVENPLAFDFSKTRTICDAFDEAWAFLQGLGSDLTEPSNSLATQTLLAKRIIEMADQGLR
Ga0318501_100994863	3300031736	Soil	MVETPLAFDLGKTHTICEAFDGAWALLQGVGSDLTEASKSPATRTILAKRIIEMADQGLT
Ga0318501_101917781	3300031736	Soil	MVKTPLAFEFSKTRTICDAFDEAWALLQGLGSDLTQAPKSLATQTILAKRIIEMADQGLRDIPA
Ga0318501_104873891	3300031736	Soil	MFETPLAFDFNKTRTVCDAFDDAWAFLQGVGSDLTEPSKSLASRTILAKRIIEMADRGLVDVTEL
Ga0307468_1013463311	3300031740	Hardwood Forest Soil	MVETPLAFSFSKTRAICDAFDDAWAFLQGLDSDLTEASRSLATRTILAKRIIEMADQG
Ga0306918_108926211	3300031744	Soil	MFETPLAFDFNKTRTVCDAFDDAWAFLQGVGSDLTEPSKSLASRTILAKRIIEMADRGLLDL
Ga0318537_102405241	3300031763	Soil	MVKTPLAFEFSKTRTICDAFDEAWALLQGLGSDLTQAPKSLATQTILAKRIIGMVDQGLRDIPE
Ga0318554_108159781	3300031765	Soil	MVENPLAFNFSKTRTICDAFDDAWTLLQGLGSDLTQAPKSLATQTILAKRIIEMADQGLRDIPA
Ga0318509_102910702	3300031768	Soil	MVENPLAFDFSKTRTICDAFDEAWAFLQGLGSDLTEPSNSLATQTILAKRIIEMADQGLMDVTEL
Ga0318509_103052741	3300031768	Soil	MFKTPLAFDFSKTRTVCDAFDDAWTFLQGVGSDLTEPSKSLASRTILAKRIIEMA
Ga0318509_104142301	3300031768	Soil	MVENPLAFNFSKTRTICVAFDEAWAFLQGLGSELTDASKSVATRTILAKRIL
Ga0318521_105781593	3300031770	Soil	MVENPLAFESSKTRRICDAFDDAWAFLQGLGCDLTDASQSLATRTILAKRIIEMADQGLTDVAA
Ga0318529_103648731	3300031792	Soil	MFKTPLAFDFSKTRTVCDAFDDAWTFLQGVGSDLTEPSKSLASRTILAKRIIEMADRG
Ga0318503_101091891	3300031794	Soil	MVEHPLAFEFSKTRTICDAFDEAWAFLQGLGSDLTQAPKSLAAQSILAKRITEMADQGLRDIPAL
Ga0318557_101802382	3300031795	Soil	MFKTPLAFDFSKTRTVCDAFDDAWTFLQGVGSDLTEPSKSLASRTILAKR
Ga0318550_104160991	3300031797	Soil	MFKTPLAFDFSKTRTVCDAFDDAWTFLQGVGSDLTEPSKSLASRTILAKRIIEMADRGLVDVTELR
Ga0318523_100767783	3300031798	Soil	VVENPLAFEFSKTRTICDAFDEAWAFLQGLGSDLTEPSNSLATQTILAKRII
Ga0318523_102225171	3300031798	Soil	MVKTPLAFEFSKTRTICDAFDKAWAFLQGLGSDLTEPSKSLATQMILAKRIIEMTDRG
Ga0318497_106109591	3300031805	Soil	MVENPLAFEFSKTRTICDAFDEAWAFLQGLGSNLTEPSNSLATQTILAKRIIE
Ga0318568_102063021	3300031819	Soil	MVEHPLAFEFSKTRTICDAFDEAWAFLQGLGSDLTPSNSLATQTILAKRII
Ga0318568_108340271	3300031819	Soil	MVENPLAFNFSKTRTICVAFDEAWAFLQGLGSELTDASKSVATRTILAKRIIEM
Ga0318567_103633671	3300031821	Soil	MVENPLAFEFSKTHTICDAFDEAWAFLEGLGSDLTQAPKSLATQTILAKRIIEMADQGLREVPELR
Ga0318511_104277061	3300031845	Soil	MVENPLAFNFSKTRTICVAFDEAWAFLQGLGSELTDASKSVATRTILAKRIIEMADQGLKEV
Ga0318511_105109151	3300031845	Soil	MVETPLAFEFSKTRTICDAFDKAWAFLQGLGSDLTEPSKSLATQMILAKRIIE
Ga0318512_106542751	3300031846	Soil	MVENPLAFAFSRTRKICDAFDEAWAFLQGLGSDLTQAPKSLATQTIVAKRIIEMADQGLMDVTELR
Ga0318544_100476952	3300031880	Soil	MFETPLAFDFNKTRTVCDAFDDAWAFLQGVGSDLTEPSKSLASRTILAKRIIEMADRGLVDVTELR
Ga0318551_104076661	3300031896	Soil	LAFEFSKTRTICDAFDEAWALLQGLGSDLTQAPKSLATQTILAKRIIEMAHIRA
Ga0318520_105963891	3300031897	Soil	MFETPLAFDFNKTRTVCDAFDDAWAFLQGVGSDLTEPSKSLASRTILAKRIIEMADRGLV
Ga0306923_104362523	3300031910	Soil	MVETPLAFDLGKTHTICEAFDGAWALLQGVGSDLTEASKSPATRTILAKRIIEMADQGLM
Ga0310913_101589444	3300031945	Soil	MVENPLAFDFSKTRTICDAFDEAWAFLQGLGSDLTEPSNSLATQTLLAKRIIEMA
Ga0310910_104479801	3300031946	Soil	MVENPLAFESSKTRRICDAFDDAWAFLQGLGSDVTDASKSLATRTILAKRIIEMADQGLT
Ga0310910_111167882	3300031946	Soil	MVENPLAFNFSKTRTICVAFDEAWAFLQGLGSELTDASKSVATRTILAKRILEMADQGLKEVPEL
Ga0310909_101295413	3300031947	Soil	MVENPLAFEFSKTHTICDAFDEALAFLQGLGSDFTQAPKSLATQTILAKRIIEMADQGLREVPELRDDALASFRIICPSR
Ga0310909_109992193	3300031947	Soil	MVEHPLAFEFSKTRTICDAFDEAWAFLQGLGSDLTQAPKSLATQTILAKRIIE
Ga0306926_119159841	3300031954	Soil	MVENPLAFEFSKTHTMCDAFDEAWAFLEGLGSDLTQAPKSLATQTVLAK
Ga0318531_102359011	3300031981	Soil	MFKTPLAFDFSKTRTVCDAFDDAWTFLQGVGSDLTEPSKSLASRTILAK
Ga0306922_104156241	3300032001	Soil	MVENSLAFDFSKTRTICVAFDEAWAFLQGLGSDLTQAPKSLATRTILAKRIIEMADQGLTDVAE
Ga0306922_107723571	3300032001	Soil	MVENPLAFEFSKTHTICDAFDEAWAFLEGLGSDLTQAPKSLATQTILAKRIIEMADQGLREVPELRD
Ga0306922_111707261	3300032001	Soil	MVENPLAFDFSKTRTICDAFDEAWAFLQGLGSDLTQAPKSLATQTILAKRI
Ga0306922_112368052	3300032001	Soil	MVEHPLAFEFSKTRTICDAFDEAWAFLQGLGSDLTQAPKSLVTQTILAKRIIEMAH
Ga0306922_112755121	3300032001	Soil	MVENPLAFEFSKTRTICDAFDEAWAFLQGLGSNLTEPSNSLATQTILAKRIIELADQGLR
Ga0310911_106516781	3300032035	Soil	MVENPLAFNFSKTRTICDAFDDVWTLLQGLGSDLTQAPKSLATQTILAKRIIEMADQGLRDIPALRD
Ga0318559_101189842	3300032039	Soil	MVEHPLAFEFSKTRTICDAFDEAWAFLQGLGSDLTQAPKSLATQTILAKRIIEMADQGLRDIPELRD
Ga0318545_101412981	3300032042	Soil	MSGMVKTPLAFEFSKTRTICDAFDEAWALLQGLGSDLTQAPKSLATQTILAKRIIEM
Ga0318556_105800152	3300032043	Soil	MVEHPLAFEFSKTRTICDAFDEAWAFLQGLGSDLTQAPKSLATQTILAKR
Ga0318575_106297711	3300032055	Soil	MVENPLAFAFSRTRKICDAFDEAWAFLQGLGSDLTQAPKSLATQTIVAKRI
Ga0318505_100337024	3300032060	Soil	MVEHPLAFEFSKTRTICDAFDEAWAFLQGLGSDLTQAPKSLATQTILAKRIIEMAHQGLMAV
Ga0318513_105136331	3300032065	Soil	MVENPLAFAFSRTRKICDAFDEAWAFLQGLGSDLTQAPKSLATQTIVAKRIIEMADQGLM
Ga0318513_106643781	3300032065	Soil	VVENPLAFEFSKTRTICDAFDEAWAFLQGLGSDLTEPSNSLATQTILAKRIIEMADQG
Ga0306924_109483172	3300032076	Soil	MVENPLAFDFSKTRTICVAFDEAWAFLQGLGSDLTDASKSFATRTILAKRIIEMADEGLTDV
Ga0306924_116197891	3300032076	Soil	MVEHPLAFEFSKTRTICDAFDEAWAFLQGLGSDLTQAPKSLATQTILAKRIIEMAHQGLM
Ga0306920_1018252841	3300032261	Soil	MVEHPLAFEFSKTRTICDAFDEAWAFLQGLGSDLTQAPKSLATQTILAKRII
Ga0306920_1025121981	3300032261	Soil	MVENPLAFDFSKTRTICDAFDAAWAFLQGLGSDLTQAPKSLAAQSILAKRITEMADQ
Ga0306920_1028035501	3300032261	Soil	MVENPLAFGFSKTRTICDAFDAAWAFLQGLGSDLTQAPKSLAAQSILAKRITEMADQ
Ga0318519_101235071	3300033290	Soil	MVENPLAFNFSKTRTICDAFDDVWTLLQGLGSDLTQAPKSLATQTILATRIIEMADQGLRDIPALRDDALA
Ga0318519_102104541	3300033290	Soil	VVENPLAFEFSKTRTICDAFDEAWAFLQGLGSDLTEPSNSLATQTILAKRIIEMADQGLM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F053917

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences