Metagenome / Metatranscriptome Family F053918

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F053918
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	87 residues
Representative Sequence	YGVGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVYLLKQEPLEANSQPSGNT
Number of Associated Samples	108
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.43 %
% of genes near scaffold ends (potentially truncated)	99.29 %
% of genes from short scaffolds (< 2000 bps)	88.57 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (83.571 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.143 % of family members)
Environment Ontology (ENVO)	Unclassified (38.571 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.83% β-sheet: 0.00% Coil/Unstructured: 52.17%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF04392	ABC_sub_bind	13.57
PF03401	TctC	8.57
PF04075	F420H2_quin_red	2.86
PF00072	Response_reg	2.14
PF06055	ExoD	1.43
PF00582	Usp	1.43
PF03992	ABM	1.43
PF00239	Resolvase	1.43
PF08281	Sigma70_r4_2	0.71
PF00571	CBS	0.71
PF02826	2-Hacid_dh_C	0.71
PF01558	POR	0.71
PF08327	AHSA1	0.71
PF00872	Transposase_mut	0.71
PF04389	Peptidase_M28	0.71
PF00248	Aldo_ket_red	0.71
PF02518	HATPase_c	0.71
PF08241	Methyltransf_11	0.71
PF11994	DUF3489	0.71
PF00723	Glyco_hydro_15	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	13.57
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	8.57
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	1.43
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.43
COG3932	Exopolysaccharide synthesis protein ExoD	Cell wall/membrane/envelope biogenesis [M]	1.43
COG1014	Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, gamma subunit	Energy production and conversion [C]	0.71
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.71
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.57 %
Unclassified	root	N/A	16.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.57 %
Unclassified	root	N/A	16.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.57 %
Unclassified	root	N/A	16.43 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	71.43 %
Unclassified	root	N/A	16.43 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	65.71 %
Unclassified	root	N/A	16.43 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	42.14 %
Unclassified	root	N/A	16.43 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.43 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.43 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	42.14 %
Unclassified	root	N/A	16.43 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.71 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.71 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.71 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.71 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.71 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.71 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	42.14 %
Unclassified	root	N/A	16.43 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.57 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.71 %
Pseudooceanicola	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola	0.71 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.71 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.71 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.71 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	42.14 %
Unclassified	root	N/A	16.43 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1.43 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.71 %
Pseudooceanicola pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	0.71 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.71 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.71 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.71 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.71 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.71 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10007753	All Organisms → cellular organisms → Bacteria → Proteobacteria	2537	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10060109	All Organisms → cellular organisms → Bacteria → Proteobacteria	835	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1008608	Not Available	1442	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1013406	Not Available	1389	Open in IMG/M
3300000955\|JGI1027J12803_105176211	Not Available	514	Open in IMG/M
3300004479\|Ga0062595_101757524	Not Available	587	Open in IMG/M
3300005177\|Ga0066690_10881692	Not Available	573	Open in IMG/M
3300005363\|Ga0008090_10150858	All Organisms → cellular organisms → Bacteria → Acidobacteria	1044	Open in IMG/M
3300005434\|Ga0070709_10512757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	913	Open in IMG/M
3300005457\|Ga0070662_101631492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300005467\|Ga0070706_102042923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	519	Open in IMG/M
3300005713\|Ga0066905_101621772	Not Available	592	Open in IMG/M
3300005764\|Ga0066903_104609072	Not Available	734	Open in IMG/M
3300005764\|Ga0066903_107275888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300005764\|Ga0066903_108258630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300005764\|Ga0066903_108553382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	521	Open in IMG/M
3300006028\|Ga0070717_11765328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300006034\|Ga0066656_11037013	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300006049\|Ga0075417_10598576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	561	Open in IMG/M
3300006797\|Ga0066659_10280874	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300006871\|Ga0075434_100655675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1068	Open in IMG/M
3300006871\|Ga0075434_102204769	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300006903\|Ga0075426_10252759	Not Available	1284	Open in IMG/M
3300006969\|Ga0075419_11401300	All Organisms → cellular organisms → Bacteria → Proteobacteria	522	Open in IMG/M
3300007076\|Ga0075435_101340813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300007255\|Ga0099791_10648052	Not Available	518	Open in IMG/M
3300009098\|Ga0105245_11810663	Not Available	663	Open in IMG/M
3300009100\|Ga0075418_11826218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	661	Open in IMG/M
3300009137\|Ga0066709_102474368	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	702	Open in IMG/M
3300009789\|Ga0126307_10643212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	856	Open in IMG/M
3300009792\|Ga0126374_10857995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	699	Open in IMG/M
3300010038\|Ga0126315_10129420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1478	Open in IMG/M
3300010046\|Ga0126384_11952037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M
3300010046\|Ga0126384_12266418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300010047\|Ga0126382_10316292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1180	Open in IMG/M
3300010047\|Ga0126382_11190600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	682	Open in IMG/M
3300010048\|Ga0126373_13308275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300010358\|Ga0126370_11618582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	620	Open in IMG/M
3300010358\|Ga0126370_12542846	Not Available	511	Open in IMG/M
3300010362\|Ga0126377_10069551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3127	Open in IMG/M
3300010366\|Ga0126379_10272489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1681	Open in IMG/M
3300010371\|Ga0134125_12162202	Not Available	605	Open in IMG/M
3300010376\|Ga0126381_101537213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	962	Open in IMG/M
3300010376\|Ga0126381_102994324	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300010398\|Ga0126383_11597879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	741	Open in IMG/M
3300010398\|Ga0126383_12850702	Not Available	565	Open in IMG/M
3300010398\|Ga0126383_13279087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300012199\|Ga0137383_10223826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1379	Open in IMG/M
3300012199\|Ga0137383_11028524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	599	Open in IMG/M
3300012201\|Ga0137365_10975406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300012202\|Ga0137363_10233628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1489	Open in IMG/M
3300012361\|Ga0137360_10065884	All Organisms → cellular organisms → Bacteria	2663	Open in IMG/M
3300012362\|Ga0137361_11068615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	728	Open in IMG/M
3300012582\|Ga0137358_10565223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	764	Open in IMG/M
3300012582\|Ga0137358_11016741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	535	Open in IMG/M
3300012923\|Ga0137359_11389454	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300012927\|Ga0137416_11908416	Not Available	544	Open in IMG/M
3300012948\|Ga0126375_11569811	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300012960\|Ga0164301_10083729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1775	Open in IMG/M
3300012971\|Ga0126369_11159326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	862	Open in IMG/M
3300012985\|Ga0164308_11345471	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300012986\|Ga0164304_11040564	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	651	Open in IMG/M
3300012986\|Ga0164304_11113344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	633	Open in IMG/M
3300012987\|Ga0164307_11435452	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300016294\|Ga0182041_10353586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1236	Open in IMG/M
3300016294\|Ga0182041_10489442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1064	Open in IMG/M
3300016294\|Ga0182041_11605953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	600	Open in IMG/M
3300016319\|Ga0182033_11392877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M
3300016341\|Ga0182035_10016338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4490	Open in IMG/M
3300016341\|Ga0182035_10196677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1591	Open in IMG/M
3300016341\|Ga0182035_11445707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	618	Open in IMG/M
3300016387\|Ga0182040_10988560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	701	Open in IMG/M
3300016404\|Ga0182037_10907849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	764	Open in IMG/M
3300016422\|Ga0182039_10113765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2026	Open in IMG/M
3300016422\|Ga0182039_10223650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1516	Open in IMG/M
3300020579\|Ga0210407_11178125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	577	Open in IMG/M
3300021168\|Ga0210406_10406514	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300021178\|Ga0210408_10079835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2565	Open in IMG/M
3300021560\|Ga0126371_12487765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300024288\|Ga0179589_10546601	Not Available	540	Open in IMG/M
3300025906\|Ga0207699_10498874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	878	Open in IMG/M
3300025915\|Ga0207693_10234604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1441	Open in IMG/M
3300025929\|Ga0207664_10788653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	855	Open in IMG/M
3300026285\|Ga0209438_1213970	Not Available	517	Open in IMG/M
3300026325\|Ga0209152_10452715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300026550\|Ga0209474_10600154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300026551\|Ga0209648_10095077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2455	Open in IMG/M
3300026557\|Ga0179587_10826109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	611	Open in IMG/M
3300027874\|Ga0209465_10377360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	710	Open in IMG/M
3300027903\|Ga0209488_10588053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	808	Open in IMG/M
3300027909\|Ga0209382_10343077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1675	Open in IMG/M
3300028881\|Ga0307277_10058354	Not Available	1582	Open in IMG/M
3300031544\|Ga0318534_10470246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	719	Open in IMG/M
3300031545\|Ga0318541_10057129	All Organisms → cellular organisms → Bacteria → Proteobacteria	2018	Open in IMG/M
3300031545\|Ga0318541_10445178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	724	Open in IMG/M
3300031573\|Ga0310915_10058940	All Organisms → cellular organisms → Bacteria	2501	Open in IMG/M
3300031573\|Ga0310915_10790976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	668	Open in IMG/M
3300031680\|Ga0318574_10006546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5029	Open in IMG/M
3300031719\|Ga0306917_10194444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1532	Open in IMG/M
3300031719\|Ga0306917_11140892	Not Available	606	Open in IMG/M
3300031719\|Ga0306917_11210875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	586	Open in IMG/M
3300031720\|Ga0307469_10889039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	824	Open in IMG/M
3300031744\|Ga0306918_10269027	All Organisms → cellular organisms → Bacteria → Proteobacteria	1305	Open in IMG/M
3300031770\|Ga0318521_10000690	All Organisms → cellular organisms → Bacteria → Proteobacteria	10086	Open in IMG/M
3300031781\|Ga0318547_10912137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	548	Open in IMG/M
3300031792\|Ga0318529_10003574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5172	Open in IMG/M
3300031793\|Ga0318548_10115386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1295	Open in IMG/M
3300031805\|Ga0318497_10171132	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300031879\|Ga0306919_10374302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1090	Open in IMG/M
3300031890\|Ga0306925_10235631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Pseudooceanicola → Pseudooceanicola pacificus	1973	Open in IMG/M
3300031890\|Ga0306925_11463376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	670	Open in IMG/M
3300031897\|Ga0318520_10683924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300031942\|Ga0310916_10582430	Not Available	951	Open in IMG/M
3300031945\|Ga0310913_10077034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2221	Open in IMG/M
3300031945\|Ga0310913_10253641	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1236	Open in IMG/M
3300031945\|Ga0310913_10294437	Not Available	1144	Open in IMG/M
3300031954\|Ga0306926_10122349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3209	Open in IMG/M
3300031954\|Ga0306926_12087990	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300031981\|Ga0318531_10508691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300032001\|Ga0306922_10470463	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300032001\|Ga0306922_10600080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1166	Open in IMG/M
3300032001\|Ga0306922_10875353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	934	Open in IMG/M
3300032010\|Ga0318569_10341777	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300032035\|Ga0310911_10187081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1174	Open in IMG/M
3300032039\|Ga0318559_10525123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300032041\|Ga0318549_10007241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3710	Open in IMG/M
3300032042\|Ga0318545_10249215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	637	Open in IMG/M
3300032051\|Ga0318532_10008262	All Organisms → cellular organisms → Bacteria → Proteobacteria	3124	Open in IMG/M
3300032054\|Ga0318570_10058453	All Organisms → cellular organisms → Bacteria → Proteobacteria	1617	Open in IMG/M
3300032059\|Ga0318533_10681408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	754	Open in IMG/M
3300032064\|Ga0318510_10340627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M
3300032068\|Ga0318553_10144897	Not Available	1228	Open in IMG/M
3300032076\|Ga0306924_12010383	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300032174\|Ga0307470_10323860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1056	Open in IMG/M
3300032180\|Ga0307471_102626029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300032180\|Ga0307471_102998349	Not Available	599	Open in IMG/M
3300032180\|Ga0307471_103414193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	562	Open in IMG/M
3300032261\|Ga0306920_101224448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1083	Open in IMG/M
3300032261\|Ga0306920_101699253	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300033290\|Ga0318519_10159768	Not Available	1265	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.86%
Host-Associated	Host-Associated	7.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.86%
Plants	Host-Associated → Plants	7.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.14%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	84.29%
Loam	Environmental → Terrestrial → Soil → Loam	8.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.29%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.29%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.71%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.29%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.29%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.14%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.43%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.71%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.71%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_100077536	3300000793	Forest Soil	CSYGVGDDESYKRALTFLENCERYTLRSLVHRSAKHHAELTVDHAKRVLSRALKKLDTSQGHNPALRAMIVDLLKQEPLEANSQPSGNT*
AF_2010_repII_A001DRAFT_100601091	3300000793	Forest Soil	ALTFLENCERYTLRSLVRRSAKHHAEVTLDHAKRIFSRALKKLDTSQGHNPTLRAMIGAIGGK*
AP72_2010_repI_A100DRAFT_10086083	3300000837	Forest Soil	LYQFLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTNSQPSGNA*
AP72_2010_repI_A001DRAFT_10134062	3300000893	Forest Soil	LLYQFLAAEIRALHCSYGVGDEESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTNSQPSGNA*
JGI1027J12803_1051762111	3300000955	Soil	NCERYTLRTLVRRSAKHHTEVTIDHAKRVFLRALTMLDSSQAHSSTLRAMMVHLLKQEPLQTDGGA*
Ga0062595_1017575242	3300004479	Soil	LTFLENCERYTLRSLVRRSAKHHAELTVDHSKRVFLRAIKMLDPQGHNPTLRAMILHLLKQEQLQTDTQASGRPKAAG*
Ga0066690_108816922	3300005177	Soil	LTFLENCERYTLRTLVRRSAKDHAEVTVDHAKRVFLRALKMLDSSRGHNPTLRAVMVHLLKQELLQTDSQASGNA*
Ga0008090_101508583	3300005363	Tropical Rainforest Soil	LAAEIRALHCSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVYLLKQEALEAISQPSGNT*
Ga0070709_105127572	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLEQEPLQTKSQPFGNA*
Ga0070662_1016314922	3300005457	Corn Rhizosphere	KSYKRALTFLENCERYTLRTLVRRSAKDHAEVTVDHAKRVFLRALKMLDSSRGHNPTLRAVMVHLLKQELLQTDSQASGNA*
Ga0070706_1020429232	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	FLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQQMVSHLGTLEAAG*
Ga0066905_1016217721	3300005713	Tropical Forest Soil	EESYKRALTFLENCERFTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMMVHLLKQEPLQTNSQIWERLKLPGDVESD*
Ga0066903_1046090721	3300005764	Tropical Forest Soil	LRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPILRAMIVHLLKQEPLQTNSQPSGNA*
Ga0066903_1072758882	3300005764	Tropical Forest Soil	FLAAEIRALHCSYGLGDGESYKRALTFLENCERYTLRTLVRRSAKHHTEVTIDHAKRVFLRALRMLDSSRGHSPTLRAMMVHLLKQEPLQTDRGA*
Ga0066903_1082586302	3300005764	Tropical Forest Soil	RALHCSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKRHAEVTVDHARRVFSRALKKLDTSQGHNPTLRAMMMYLLKQEPLEANSQPFGST*
Ga0066903_1085533822	3300005764	Tropical Forest Soil	FLAAEIRALHCSYGLGDGESYKRALTFLENCERYTLRTLVSRSAKHHTELTIDHAKRVFLRALTMLDSSQGHSSTLRAMMVHLLKQEPLQTDGGA*
Ga0070717_117653281	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	FLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTNSQPSGNA*
Ga0066656_110370131	3300006034	Soil	SAKHHAEVTVDHAKRVFSRALKKLETAQGHNPTLRAMIVHLLEQEPPQTKVSHLETLEVAG*
Ga0075417_105985762	3300006049	Populus Rhizosphere	ESYKRALTFLENCERYTLRSLVRRSAEHRAAVTVDHAKRVFSRALKKLDTSQGYDPTLRAMIVHLLKEEELQTNGQPSGNV*
Ga0066659_102808741	3300006797	Soil	LAAEIRALHLSYGVGDGESYKRALTFLENCERFTLRSLVRRSAEHHAEVTVDHAKRVFSRALKKLDTSQGHDPTLRAMIVHLLKQERLQTKVSHLATLEAAG*
Ga0075434_1006556751	3300006871	Populus Rhizosphere	LYQFLAAEIRALHCSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLNTSQGRNPNLRAMIMYFFKQEPLDPNSQPSWNT*
Ga0075434_1022047691	3300006871	Populus Rhizosphere	ENCERYTLRSLVRRSAKLHAEVTVDHAKRVFSRALKKLETAQGHNPTVRAMIVHLLKQEPPQQMVSHLETLEAAGDELKRD*
Ga0075426_102527592	3300006903	Populus Rhizosphere	LAAEIRALHCSYGVGDDESYKRALGFLENCERYTLRSLVRRSAKHHAEITVDHAKRVFLRALEKLDSSHGHNPTVRAMIMYSDSPGAC*
Ga0075419_114013002	3300006969	Populus Rhizosphere	HCSYGVGDGESYKKALTFLENCERYTLRSLVRTSAKHHAEVTVDHAKRVFSRALKKLDSSQGHNPTLRAMMVYLLKQEPLEANSQPSGNT*
Ga0075435_1013408131	3300007076	Populus Rhizosphere	SYKRALTFLENCERYTLRTLVRRSAKDHAEVTVDHAKRVFLRALKMLDSSRGHNPTLRAVMVHLLKQELLQTDSQASGNA*
Ga0099791_106480522	3300007255	Vadose Zone Soil	TFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTNSQPSGNT*
Ga0105245_118106632	3300009098	Miscanthus Rhizosphere	VVEFTVESYKRAQTFLENCERYTLRSLVRRSAEHRAALTVDHAKRVFSRALKKLDTSQGYDPTLRAMIVHLLKEEELQTNGQPSGNV*
Ga0075418_118262181	3300009100	Populus Rhizosphere	HSSYGIGDEESYKRAQTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDTSHGHNPTLRAMMVHLLEQEPLQTNSQPSGNT*
Ga0066709_1024743681	3300009137	Grasslands Soil	DGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLKSPLF*
Ga0126307_106432122	3300009789	Serpentine Soil	CSYGVGDGESYKRALTFLENCERFTLRSLVRKSAKHHVEVTVDHAKEVFSHAIKKLDTSQGNDPTLRAMIVFLPKEEPLQANSQSSRKA*
Ga0126374_108579951	3300009792	Tropical Forest Soil	LLYQFLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKQHAEVTVDHARRVFSRALKKLNTSRDHNAALRAMIAHLLKQEPLQTNSQSSETFEAAG*
Ga0126315_101294201	3300010038	Serpentine Soil	AESYKRALTFLQNCERFTLRSLVRKSAKHHAEVTVDHAKRVFSRALNKLDTSRGHDPTLRAMIVCLLKEEPLQANSQPSGKA*
Ga0126384_119520373	3300010046	Tropical Forest Soil	LYQFLAAEIRALHCSYGVGDGESYKRALTFLENCERFTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTNSQPSGNA*
Ga0126384_122664181	3300010046	Tropical Forest Soil	YGVGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVYLLKQEPLEANSQPSGNT*
Ga0126382_103162921	3300010047	Tropical Forest Soil	LAAEIRALHCSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNATLRAMIVYLLKQEPLEANSQPSGNT*
Ga0126382_111906001	3300010047	Tropical Forest Soil	GDDESYKRALTFLENCERYTLRSLVRRSAQHHAEVTVDHAKRIFSRALKKLDISQGHNPTLRALIVYLLKHEPLEANSQPSGNT*
Ga0126373_133082751	3300010048	Tropical Forest Soil	YQFLAAEIRALHCSYGVGDGESYKRALTFLKNCERYALRSLVRRSAKHHAEMTVAHAKRVFSRALKKLDTSQGHDPTLRGMIVHLLKQEPLQTNG*
Ga0126370_116185821	3300010358	Tropical Forest Soil	DGESYKKALTFLENCERYTLRSLVRRSAKRHAEVTVDHAKRVFSRALKKLDTSQGHDPTLRAMIGHMLKYSP*
Ga0126370_125428461	3300010358	Tropical Forest Soil	RALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDSSQGHNPTLRAMIVYSLKQEPLEANSQPSGNT*
Ga0126377_100695517	3300010362	Tropical Forest Soil	GESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTPQGHNPTLRAMIVHWLKQEPLQTNSQPSGNN*
Ga0126379_102724891	3300010366	Tropical Forest Soil	ESYKRALTFLENCERHTLRTLVRRSAKHHTEVTIDHAKRVFLRALRMLDSSQGHSPTLRAMMVHLLKQEPLQTDRGA*
Ga0134125_121622022	3300010371	Terrestrial Soil	KRALTFLENCERYTLRSLVRRSAEHRAALTVDHAKRVFSRALKKLDTSQGYDPTLRAMIVHLLKEEELQTNGQPSGNV*
Ga0126381_1015372131	3300010376	Tropical Forest Soil	DDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDISQGHNPTLRAMMVYLLKQEASEGNSRPSGNT*
Ga0126381_1029943241	3300010376	Tropical Forest Soil	GDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDSSQGHNPTLRAMIVYLLKQEPLEANSQPSGNT*
Ga0126383_115978791	3300010398	Tropical Forest Soil	EIRALHCSYGLGDDESYKRALTFLENCERYTLRSLVRRSAQHHAEVTVDHAKRIFSRALKKLDISQGHNPTLRALIVYLLKHEPLEANSQPSGNT*
Ga0126383_128507021	3300010398	Tropical Forest Soil	LHCSYGLGDDESYKRALRFLENCERYTLRNLVRRSAKHHAEVTVDHAKRVFSRALDKLDSSQGHNPTLRAMIVYLLKEEPLEANSQSSGNS*
Ga0126383_132790871	3300010398	Tropical Forest Soil	DESYKRALTFLENCERYTLRSLVRRSTKHHAKVTVDHAKRIFSRALKKLDTSQGHNPTLRALIAYLSKREPLETNSQLSGNTL*
Ga0137383_102238261	3300012199	Vadose Zone Soil	YQFLAAEIRALHLSYGVGDGESYKRALTFLENCERFTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHDPTLRAMIVHLLKQEPLQTNSQPSGNA*
Ga0137383_110285241	3300012199	Vadose Zone Soil	ESYKRALTFLENCERYTLRSLVRRSAKHHAEATVDHAKRIFSRALKKLDTSHGHNPTLRAMIVHLLKQEPLQVSHLGTLEAAG*
Ga0137365_109754062	3300012201	Vadose Zone Soil	LAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLQAMIVHLLNQEPLQTNSQPSGNA*
Ga0137363_102336282	3300012202	Vadose Zone Soil	ILLYQFLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEATVDHAKRIFSRALKKLDTSHGHNPTLRAMIVHLLKQEPLQVSHLGTLEAAG*
Ga0137360_100658841	3300012361	Vadose Zone Soil	GESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRGFSRALKKLDTSQGHNPTLRAIIVHVLKQEPLKSPLF*
Ga0137361_110686151	3300012362	Vadose Zone Soil	RALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLKSPLF*
Ga0137358_105652231	3300012582	Vadose Zone Soil	LYQFLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHDPTLRAMIVHLLKQEPLQTNSQ
Ga0137358_110167411	3300012582	Vadose Zone Soil	IRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRAFKKLDTSQGHNPTLRAMIVHLLKQEPLKSPLF*
Ga0137359_113894542	3300012923	Vadose Zone Soil	YQFLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRAFKKLDTSQGHNPTLRAMIVHLLKQEPLKSPLF*
Ga0137416_119084162	3300012927	Vadose Zone Soil	TFLENCERYTLRSLVRRSAKHHAEATVDHAKRIFSRALKKLDTSHGHNPTLRAMIVHLLKQEPLQVSHLGTLEAAG*
Ga0126375_115698112	3300012948	Tropical Forest Soil	GDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTPQGHNPTLRAMIVHWLKQEPLQTNSQPSGNN*
Ga0164301_100837293	3300012960	Soil	YTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDTSHGHNPTLRAMIVHLLEQEPLQTNSQPSGNT*
Ga0126369_111593262	3300012971	Tropical Forest Soil	SYGVGDDESYKRALTFLENCERYTLRSLVRRSAKRHAEVTVDHARRVFSRALKKLDTSQGHNPTLRAMMMYLLKQEPLEANSQPFGST*
Ga0164308_113454711	3300012985	Soil	YTLRSLVRRSAEHRAAVTVDHAKRVFSRALKKLDTSQGYDPTLRAMIVHLLKEEELQTNGQPSGNV*
Ga0164304_110405641	3300012986	Soil	YQFLAAEIRALHCSYGLGDGESYKRALKFLENCERYTLRTLVRRSAKDHAEVTVDHAKRVFLRALKMLDSSRGHNPTLRAVMVHLLKQELLQTDSQASGNA*
Ga0164304_111133441	3300012986	Soil	RALTFLENCERYTLRSLVRRSAKHHAEITVDHAKRVFLRALEKLDSSQGHNPTVQAMIMYLLKEEPLEANSQLSGNT*
Ga0164307_114354522	3300012987	Soil	SYKRAQTFLENCERYTLRSLVRRSAEHRAALTVDHAKRVFSRALKKLDTSQGYDPTLRAMIVHLLKEEELQTNGQPSGNV*
Ga0182041_103535861	3300016294	Soil	YGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTNS
Ga0182041_104894423	3300016294	Soil	GDDESYKRALTFLENCERYTLRSLVRRSAKHHAEATIHHAKRVFSRALRKLDTSQGHNPTVRAMMVYLLKQEPLEANNQPSGNTLG
Ga0182041_116059531	3300016294	Soil	EIRALHCSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKNHAEVTIHHAKRVFSRALKKLDTSQGHNPTVRAMMVYLLSQEPLEANSQPL
Ga0182033_113928772	3300016319	Soil	GDDESYKRALTFLENCERYTLRSLVRRSAKHHAEATIHHAERVFSRALKKLDTSQGHNPTVRAMMVYLLKQEPLEANNQPSGNTLG
Ga0182035_100163381	3300016341	Soil	LLYQFLAAEIRALHCSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEATIHHAKRVFSRALRKLDTSQGHNPTVRAMMVYLLKQEPLEANNQPSGNTLV
Ga0182035_101966774	3300016341	Soil	QFLAAEIRALHCSYGVGDDESYKRALTFLENCERHTLRSLVRRSAKHHAEMTVDHAKRVFSRALKKLDISQGHNPTLRVMIVYLLKQEPLEANSQPSGNTSG
Ga0182035_114457072	3300016341	Soil	LHCSYGVGDEESYKRALTFLENCERYTLRSLVRRPAKHHAEVTVDRAKRVFSRALKKLDTSQGHNPTLRAMIMHLLKQEPLHTNSQPSGNA
Ga0182040_109885602	3300016387	Soil	GDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDISQGHNPTLRAMMVYLLKHKDTQRHTPPNALSYGEP
Ga0182037_109078491	3300016404	Soil	NRRIRILLYQFLAAEIRALHCSYGVGDGESYKSALTFLKNCERYTLRSLVRRSAKHHAEMTFDHAKRVFSRALKKLDTSQGHDPALRAMIVHLLKQEPADK
Ga0182039_101137654	3300016422	Soil	HCSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKNHAEVTIHHAKRVFSRALKKLDTSQGHNPTVRAMMVYLLSQEPLEANSQPL
Ga0182039_102236501	3300016422	Soil	KRALTFLENCERYTLRSLVRRSAKHHAEATIHHAKRVFSRALRKLDTSQGHNPTVRAMMVYLLKQEPLEANNQPSGNTLV
Ga0210407_111781251	3300020579	Soil	ALHCSYGFGDVESYKRALTFLENCERYTLRSLVRRSAEHRAALTVDHAKRVFSRALKKLDTSQGYDPTLRAMIVHLLKEEELQTNGQPSGNV
Ga0210406_104065141	3300021168	Soil	ILLYQFLAAEIRALHLSYGVGDGESYKRALTFLENCERFTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHDPTLRAMIVHLLKQEPLRTNSQPSGNA
Ga0210408_100798351	3300021178	Soil	ALHCSYGVGDGESYKRALKFLEDCERYTLRSLVRRSAKHHAEMTVDHAKRVFSRALKKLDTSQGQNEALRAMILHLMEQEPLQTNSQPRSPRS
Ga0126371_124877652	3300021560	Tropical Forest Soil	ILLYQFLAAEIRALHCSYGVGDDESYKRARTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDSSQGHNPTLRAMIVYLLKQEPLEANSQPSGNT
Ga0179589_105466011	3300024288	Vadose Zone Soil	NCERYTLRSLVRRSAKHHAEATVDHAKRIFSRALKKLDTSHGHNPTLRAMIVHLLKQEPLQVSHLGTLEAAG
Ga0207699_104988741	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	TKEHTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDTSHGHNPTLRAMMVHLLEQEPLQTNSQPSGNT
Ga0207693_102346041	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ALHCSYGLGDGKSYKRALTFLENCERYTLRTLVRRSAKDHAEVTVDHAKRVFLRALKMLDSSRGHNPTLRAVMVHLLKQELLQTDSQASGNGHGS
Ga0207664_107886533	3300025929	Agricultural Soil	KEHTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDTSHGHNPTLRAMMVHLLEQEPLQTNSQPSGNT
Ga0209438_12139702	3300026285	Grasslands Soil	TLRSLVRRSAKHHAEATVDHAKRIFSRALKKLDTSHGHNPTLRAMIVHLLKQEPLQVSHLGTLEAAG
Ga0209152_104527151	3300026325	Soil	YQFLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVQLLKQEPLQTNGQPSGNA
Ga0209474_106001541	3300026550	Soil	ESYKRALTFLENCERYTLRTLVRRSAKDHAEVTVDHAKRVFLRALKMLDSSRGHNPTLRAVMVHLLKQELLQTDSQASGNA
Ga0209648_100950773	3300026551	Grasslands Soil	ENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMTVHLLKQEPLKSPLF
Ga0179587_108261091	3300026557	Vadose Zone Soil	LLYQFLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALEKLDTSQGHNPTLRAMIVHLLKQEPLKSPLF
Ga0209465_103773602	3300027874	Tropical Forest Soil	FLAAEIRALHCSYGVGDDESYKRALTFLENCEQYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLQAMIMHLLRQEPLQTNSQPSGNA
Ga0209488_105880532	3300027903	Vadose Zone Soil	LHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMTVHLLKQEPLKSPLF
Ga0209382_103430773	3300027909	Populus Rhizosphere	NRILLYRFLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKYHAEMTVDHAKRIFSRALKKLDTSRGDNPTLRAMIVHLLQQEPLQTGNT
Ga0307277_100583542	3300028881	Soil	QFLPAEIRALHCSYGLGDGESYKRALTFLENCERYTLRSLVRRSAKHHAELTVDHSKRVFLRAIKMLDPQGHNPTLRAMILHLLKQEQLQTDTQASGKA
Ga0318534_104702461	3300031544	Soil	LYQFLAAEIRALHCSYGVGDDESYKRALTFLENCERYTLRSLARRSAKHHAEVTVDHAKRVFSRALKKLDTSQNPTLRAMIVYLLKQEPLEANSQPSGNA
Ga0318541_100571291	3300031545	Soil	NCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQESLQTNSQPSGNA
Ga0318541_104451782	3300031545	Soil	SYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTADK
Ga0310915_100589401	3300031573	Soil	QFLAAEIRALHCSYGVGDDESYKRALTFLENCERYTLRSLARRSAKHHAEVTVDHAKRVFSRALKKLDTSQNPTLRAMIVYLLKQEPLEANSQPSGNA
Ga0310915_107909762	3300031573	Soil	LTFLENCERYTLRSLVRRSAKNHAEVTIHHAKRVFSRALKKLDTSQGHNPTVRAMMVYLLSQEPLEANSQPL
Ga0318574_100065468	3300031680	Soil	ENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQESLQTNSQPSGNA
Ga0306917_101944441	3300031719	Soil	ILLYQFLAAEIRALHCSYGVGDDESYKRALTFLENCERHTLRSLVRRSAKHHAEMTVDHAKRVFSRALKKLDISQGHNPTLRVMIVYLLKQEPLEANSQPSGNTSG
Ga0306917_111408923	3300031719	Soil	SYKRALTFLENCERFTLRSLVRRSAKHNAEVTVDHAKRVFSRALKKLDTSQGHDPTLRAMIVHLLKQEPLQTNSQPSGNA
Ga0306917_112108752	3300031719	Soil	LYQFLAAEIRALHCSYGLGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALRKLDTSQGHNPTLRAMMVYLLKHKDTQRHTPPNALSYGEP
Ga0307469_108890393	3300031720	Hardwood Forest Soil	YQFLAAEIRALHCSYGVGDDESYKRALGLLENCERYTLRSLVRRSAKHHAEITVDHAKRVFLRALEKLDSSQGHNPTVQAMIMYLLKEEPLEANSQLSGNT
Ga0306918_102690271	3300031744	Soil	IRALHCSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEATIHHAKRVFSRALRKLDTSQGHNPTVRAMMVYLLKQEPLEANNQPSGNTLV
Ga0318521_100006901	3300031770	Soil	LTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQESLQTNSQPSGNA
Ga0318547_109121371	3300031781	Soil	IRALHCSYGLGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALRKLDTSQGHNPTLRAMMVYLLKHKDTQRHTPPNALSYGEP
Ga0318529_100035748	3300031792	Soil	ILLYQFLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQESLQTNSQPSGNA
Ga0318548_101153861	3300031793	Soil	YQFLAAEIRALHCSYGVGDDESYKRALTFLENCERHTLRSLVRRSAKHHAEMTVDHAKRVFSRALKKLDISQGHNPTLRVMIVYLLKQEPLEANSQPSGNTSG
Ga0318497_101711321	3300031805	Soil	AEIRALHCSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKNHAEVTIHHAKRVFSRALKKLDTSQGHNPTVRAMMVYLLSQEPLEANSQPL
Ga0306919_103743023	3300031879	Soil	SYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTADK
Ga0306925_102356314	3300031890	Soil	EIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTADK
Ga0306925_114633761	3300031890	Soil	DDESYKRALTFLENCERYTLRSLVRRSAKHHAEATIHHAKRVFSRALRKLDTSQGHNPTVRAMMVYLLKQEPLEANNQPSGNTLV
Ga0318520_106839241	3300031897	Soil	GVGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVYLLKQEPLEANSQPSVNT
Ga0310916_105824303	3300031942	Soil	LSYGVGDGESYKRALTFLENCERFTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHDPTLRAMIVHLLKQEPLQTNSQPSGNA
Ga0310913_100770341	3300031945	Soil	DESYKRALTFLENCERYTLRSLVRRSAKHHAEATIHHAERVFSRALKKLDTSQGHNPTVRAMMVYLLKQEPLEANNQPSGNTLV
Ga0310913_102536413	3300031945	Soil	LAAEIRALHCSYGVGDDESYKRALTFLENCERHTLRSLVRRSAKHHAEMTVDHAKRVFSRALKKLDISQGHNPTLRVMIVYLLKQEPLEANSQPSGNTSG
Ga0310913_102944371	3300031945	Soil	GLGDDESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALRKLDTSQGHNPTLRAMMVYLLKHKDTQRHTPPNALSYGEP
Ga0306926_101223495	3300031954	Soil	SYKRALTFLENCEQYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVYLLKQEPLEVNSQRSGNT
Ga0306926_120879901	3300031954	Soil	RALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTNS
Ga0318531_105086911	3300031981	Soil	SYGVGDEESYKRALTFLENCERYTLRSLVRRPAKHHAEVTVDRAKRVFSRALKKLDTSQGHNPTLRAMIMHLLKQEPLHTNSQPSGNA
Ga0306922_104704631	3300032001	Soil	QFLAAEIRALHCSYGVGDDESYKRALTFLENCEQYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQNPTLRAMIVYLLKQEPLEANSQPSGNA
Ga0306922_106000801	3300032001	Soil	VGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTNS
Ga0306922_108753531	3300032001	Soil	CSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKNHAEVTIHHAKRVFSRALKKLDTSQGHNPTVRAMMVYLLSQEPLEANSQPL
Ga0318569_103417772	3300032010	Soil	LLYQFLAAEIRALHCSYGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTNS
Ga0310911_101870813	3300032035	Soil	FLAAEIRALHCSYGVGDDESYKRALTFLENCERHTLRSLVRRSAKHHAEMTVDHAKRVFSRALKKLDISQGHNPTLRVMIVYLLKQEPLEANSQPSGNTSG
Ga0318559_105251231	3300032039	Soil	ILLYQFLAAEIRALHCSYGVGDGESYKSALTFLKNCERYTLRSLVRRSAKHHAEMTFDHAKRVFSRALKKLDTSQGHDPALRAMIVHLLKQEPADK
Ga0318549_100072416	3300032041	Soil	CERYTLRSLARGSAKHHAEVTVDHAKRVFSRALKKLDTSQNPTLRAMIVYLLKQEPLEANSQPSGNA
Ga0318545_102492151	3300032042	Soil	RILLYQFLAAEIRALHCSYGVGDDESYKRALTFLENCERYTLRSLARRSAKHHAEVTVDHAKRVFSRALKKLDTSQNPTLRAMIVYLLKQEPLEANSQPSGNA
Ga0318532_100082621	3300032051	Soil	YKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQESLQTNSQPSGNA
Ga0318570_100584531	3300032054	Soil	RYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQESLQTNSQPSGNA
Ga0318533_106814081	3300032059	Soil	LHCSYGVGDDESYKRALTFLENCERYTLRSLVRRSAKNHAEVTIHHAKRVFSRALKKLDTSQGHNPTVRAMMVYLLSQEPLEANSQPL
Ga0318510_103406273	3300032064	Soil	FLAAEIRALHCSYGVGDDESYKRALTFLENCEQYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVYLLKQEPLEVNSQRSGNT
Ga0318553_101448974	3300032068	Soil	YGVGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQESLQTNSQPSGNA
Ga0306924_120103832	3300032076	Soil	LTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTNS
Ga0307470_103238601	3300032174	Hardwood Forest Soil	ALHCSYGIGDEESYKRAQTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDTSHGHNPTLRAMIVHLLEQEPLQTNSQPSGNT
Ga0307471_1026260291	3300032180	Hardwood Forest Soil	YKRAQTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRIFSRALKKLDTSHGHNPTLRAMIVHLLEQEPLQTNSQPSGNT
Ga0307471_1029983491	3300032180	Hardwood Forest Soil	ERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLQAMIVYLWKQEPLEVNSQPSGNT
Ga0307471_1034141931	3300032180	Hardwood Forest Soil	AAEIRALHCSYGIGDGESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTPQGDNPTLRAMIVHLLKHEPLQTNSQPSGNT
Ga0306920_1012244483	3300032261	Soil	RALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQGHNPTLRAMIVHLLKQEPLQTADK
Ga0306920_1016992533	3300032261	Soil	LHCSYGVGDDESYKRALTFLENCEQYTLRSLVRRSAKHHAEVTVDHAKRVFSRALKKLDTSQNPTLRAMIVYLLKQEPLEANSQPSGNA
Ga0318519_101597682	3300033290	Soil	DESYKRALTFLENCERYTLRSLVRRSAKHHAEVTVDHAKRVFSRALRKLDTSQGHNPTLRAMMVYLLKHKDTQRHTPPNALSYGEP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F053918

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences