Metagenome / Metatranscriptome Family F054168

Basic Information
Family ID	F054168
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	53 residues
Representative Sequence	VVERLDEERLETLRTWGAGLSTSARDELRAAGKAILMLVDEIDRLEADL
Number of Associated Samples	127
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.26 %
% of genes near scaffold ends (potentially truncated)	86.43 %
% of genes from short scaffolds (< 2000 bps)	81.43 %
Associated GOLD sequencing projects	120
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (68.571 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.429 % of family members)
Environment Ontology (ENVO)	Unclassified (35.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 71.43% β-sheet: 0.00% Coil/Unstructured: 28.57%
Feature Viewer

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Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF01042	Ribonuc_L-PSP	27.86
PF00072	Response_reg	8.57
PF04226	Transgly_assoc	4.29
PF13472	Lipase_GDSL_2	3.57
PF00122	E1-E2_ATPase	2.86
PF00294	PfkB	2.14
PF00082	Peptidase_S8	1.43
PF00484	Pro_CA	1.43
PF01266	DAO	1.43
PF02769	AIRS_C	1.43
PF00496	SBP_bac_5	0.71
PF13847	Methyltransf_31	0.71
PF12802	MarR_2	0.71
PF02910	Succ_DH_flav_C	0.71
PF02129	Peptidase_S15	0.71
PF00004	AAA	0.71
PF01058	Oxidored_q6	0.71
PF01872	RibD_C	0.71
PF00690	Cation_ATPase_N	0.71
PF03411	Peptidase_M74	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	27.86
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	4.29
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	3.57
COG2216	K+ transport ATPase, ATPase subunit KdpB	Inorganic ion transport and metabolism [P]	2.86
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	2.86
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	1.43
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.71
COG0377	NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase	Energy production and conversion [C]	0.71
COG1740	Ni,Fe-hydrogenase I small subunit	Energy production and conversion [C]	0.71
COG1941	Coenzyme F420-reducing hydrogenase, gamma subunit	Energy production and conversion [C]	0.71
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.71
COG3260	Ni,Fe-hydrogenase III small subunit	Energy production and conversion [C]	0.71
COG3770	Murein endopeptidase MepA (D-alanyl-D-alanine-endopeptidase)	Cell wall/membrane/envelope biogenesis [M]	0.71

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.57 %
Unclassified	root	N/A	31.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.57 %
Unclassified	root	N/A	31.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.57 %
Unclassified	root	N/A	31.43 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	60.71 %
Unclassified	root	N/A	31.43 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	48.57 %
Unclassified	root	N/A	31.43 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	32.86 %
Unclassified	root	N/A	31.43 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.43 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	25.00 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4.29 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.43 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.71 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.43 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	25.00 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	3.57 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1.43 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.71 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.43 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	25.00 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	3.57 %
Pedococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Pedococcus	1.43 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.71 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.43 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	25.00 %
Pedococcus cremeus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Pedococcus → Pedococcus cremeus	1.43 %
Solirubrobacter soli	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	0.71 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.71 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig139939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Pedococcus → Pedococcus cremeus	545	Open in IMG/M
3300003998\|Ga0055472_10151041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	690	Open in IMG/M
3300004013\|Ga0055465_10244300	Not Available	603	Open in IMG/M
3300004114\|Ga0062593_103458629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300004156\|Ga0062589_101517127	All Organisms → cellular organisms → Bacteria → Terrabacteria group	660	Open in IMG/M
3300004800\|Ga0058861_10059690	Not Available	614	Open in IMG/M
3300005174\|Ga0066680_10103202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1747	Open in IMG/M
3300005331\|Ga0070670_101925127	Not Available	545	Open in IMG/M
3300005334\|Ga0068869_100882988	All Organisms → cellular organisms → Bacteria → Terrabacteria group	773	Open in IMG/M
3300005343\|Ga0070687_100921727	Not Available	628	Open in IMG/M
3300005354\|Ga0070675_100080372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2717	Open in IMG/M
3300005354\|Ga0070675_101742877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300005355\|Ga0070671_101874428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300005365\|Ga0070688_101128719	Not Available	628	Open in IMG/M
3300005367\|Ga0070667_100210513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1728	Open in IMG/M
3300005441\|Ga0070700_100307549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1159	Open in IMG/M
3300005441\|Ga0070700_100455266	Not Available	975	Open in IMG/M
3300005444\|Ga0070694_101040621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	681	Open in IMG/M
3300005530\|Ga0070679_101362314	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300005545\|Ga0070695_101241536	All Organisms → cellular organisms → Bacteria → Terrabacteria group	614	Open in IMG/M
3300005548\|Ga0070665_101719027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300005564\|Ga0070664_100749562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli	911	Open in IMG/M
3300005615\|Ga0070702_100607904	All Organisms → cellular organisms → Bacteria → Terrabacteria group	821	Open in IMG/M
3300005618\|Ga0068864_100649951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1027	Open in IMG/M
3300005718\|Ga0068866_10548199	Not Available	773	Open in IMG/M
3300005841\|Ga0068863_100871125	All Organisms → cellular organisms → Bacteria → Terrabacteria group	900	Open in IMG/M
3300005842\|Ga0068858_100379139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1357	Open in IMG/M
3300005844\|Ga0068862_100799265	Not Available	921	Open in IMG/M
3300005844\|Ga0068862_101229994	All Organisms → cellular organisms → Bacteria → Terrabacteria group	748	Open in IMG/M
3300005888\|Ga0075289_1032096	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	784	Open in IMG/M
3300006038\|Ga0075365_11274290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300006354\|Ga0075021_10196200	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300006904\|Ga0075424_101534092	All Organisms → cellular organisms → Bacteria → Terrabacteria group	707	Open in IMG/M
3300009081\|Ga0105098_10584186	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300009094\|Ga0111539_12058099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	662	Open in IMG/M
3300009098\|Ga0105245_11342185	Not Available	764	Open in IMG/M
3300009100\|Ga0075418_13024610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300009146\|Ga0105091_10102042	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300009147\|Ga0114129_10451960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1685	Open in IMG/M
3300009147\|Ga0114129_12841258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300009156\|Ga0111538_11670484	All Organisms → cellular organisms → Bacteria → Terrabacteria group	802	Open in IMG/M
3300009157\|Ga0105092_10866722	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300009551\|Ga0105238_12791711	All Organisms → cellular organisms → Bacteria → Terrabacteria group	525	Open in IMG/M
3300009553\|Ga0105249_10404394	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300009553\|Ga0105249_13131861	Not Available	531	Open in IMG/M
3300010373\|Ga0134128_11134231	Not Available	863	Open in IMG/M
3300010375\|Ga0105239_12458803	All Organisms → cellular organisms → Bacteria → Terrabacteria group	607	Open in IMG/M
3300010400\|Ga0134122_13358282	Not Available	503	Open in IMG/M
3300011119\|Ga0105246_10383639	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300012185\|Ga0136619_10006497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4558	Open in IMG/M
3300012501\|Ga0157351_1053046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	539	Open in IMG/M
3300012892\|Ga0157294_10221846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300012897\|Ga0157285_10333771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300012899\|Ga0157299_10193468	Not Available	607	Open in IMG/M
3300012899\|Ga0157299_10202263	Not Available	599	Open in IMG/M
3300012902\|Ga0157291_10020125	Not Available	1321	Open in IMG/M
3300012904\|Ga0157282_10071700	Not Available	904	Open in IMG/M
3300012909\|Ga0157290_10370262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300012911\|Ga0157301_10059838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1011	Open in IMG/M
3300012943\|Ga0164241_10440113	Not Available	936	Open in IMG/M
3300012955\|Ga0164298_10846329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300013102\|Ga0157371_11073234	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300013105\|Ga0157369_10139855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2562	Open in IMG/M
3300013306\|Ga0163162_10499186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1347	Open in IMG/M
3300014325\|Ga0163163_10400294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1431	Open in IMG/M
3300014326\|Ga0157380_12916203	Not Available	544	Open in IMG/M
3300014745\|Ga0157377_11021262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300015374\|Ga0132255_104204136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	611	Open in IMG/M
3300017787\|Ga0183260_10462495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	833	Open in IMG/M
3300018071\|Ga0184618_10028609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1897	Open in IMG/M
3300018466\|Ga0190268_11753745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	557	Open in IMG/M
3300018481\|Ga0190271_11578100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	772	Open in IMG/M
3300019356\|Ga0173481_10333710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Pedococcus → Pedococcus cremeus	718	Open in IMG/M
3300019878\|Ga0193715_1008875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2154	Open in IMG/M
3300020020\|Ga0193738_1035684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1533	Open in IMG/M
3300022883\|Ga0247786_1036314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	971	Open in IMG/M
3300022883\|Ga0247786_1138593	All Organisms → cellular organisms → Bacteria → Terrabacteria group	543	Open in IMG/M
3300022903\|Ga0247774_1025793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1577	Open in IMG/M
3300022915\|Ga0247790_10151509	All Organisms → cellular organisms → Bacteria → Terrabacteria group	597	Open in IMG/M
3300023064\|Ga0247801_1052177	Not Available	627	Open in IMG/M
3300023072\|Ga0247799_1096437	Not Available	529	Open in IMG/M
3300023077\|Ga0247802_1073813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300025796\|Ga0210113_1022144	All Organisms → cellular organisms → Bacteria	1306	Open in IMG/M
3300025899\|Ga0207642_10298704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	933	Open in IMG/M
3300025903\|Ga0207680_10140802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1599	Open in IMG/M
3300025917\|Ga0207660_10073626	All Organisms → cellular organisms → Bacteria	2491	Open in IMG/M
3300025927\|Ga0207687_10248310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1413	Open in IMG/M
3300025927\|Ga0207687_10287991	Not Available	1319	Open in IMG/M
3300025933\|Ga0207706_10031220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4747	Open in IMG/M
3300025949\|Ga0207667_12142584	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300025960\|Ga0207651_11217173	All Organisms → cellular organisms → Bacteria → Terrabacteria group	676	Open in IMG/M
3300025986\|Ga0207658_10773148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	871	Open in IMG/M
3300026035\|Ga0207703_10340640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1378	Open in IMG/M
3300026035\|Ga0207703_11393897	Not Available	674	Open in IMG/M
3300026067\|Ga0207678_11148494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	688	Open in IMG/M
3300026075\|Ga0207708_10055355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3024	Open in IMG/M
3300026089\|Ga0207648_10979128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	792	Open in IMG/M
3300027717\|Ga0209998_10070990	Not Available	832	Open in IMG/M
3300027909\|Ga0209382_10738116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1055	Open in IMG/M
3300028587\|Ga0247828_10448792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	755	Open in IMG/M
3300028587\|Ga0247828_10944180	All Organisms → cellular organisms → Bacteria → Terrabacteria group	559	Open in IMG/M
3300028590\|Ga0247823_10959274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	641	Open in IMG/M
3300028596\|Ga0247821_10621321	Not Available	699	Open in IMG/M
3300028596\|Ga0247821_10803343	All Organisms → cellular organisms → Bacteria → Terrabacteria group	620	Open in IMG/M
3300028718\|Ga0307307_10133306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	770	Open in IMG/M
3300028721\|Ga0307315_10150150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	707	Open in IMG/M
3300028784\|Ga0307282_10033036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2245	Open in IMG/M
3300028802\|Ga0307503_10176348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	993	Open in IMG/M
3300028811\|Ga0307292_10032455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1897	Open in IMG/M
3300028812\|Ga0247825_10592264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	794	Open in IMG/M
3300028889\|Ga0247827_11350901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300030336\|Ga0247826_11719164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300031562\|Ga0310886_10072559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1636	Open in IMG/M
3300031562\|Ga0310886_10411288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	800	Open in IMG/M
3300031894\|Ga0318522_10406046	Not Available	516	Open in IMG/M
3300031901\|Ga0307406_10666963	Not Available	865	Open in IMG/M
3300031938\|Ga0308175_102753602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300032013\|Ga0310906_10167860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1299	Open in IMG/M
3300032013\|Ga0310906_10374896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	933	Open in IMG/M
3300032017\|Ga0310899_10067834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1359	Open in IMG/M
3300033550\|Ga0247829_10715823	All Organisms → cellular organisms → Bacteria → Terrabacteria group	833	Open in IMG/M
3300034820\|Ga0373959_0062677	All Organisms → cellular organisms → Bacteria → Terrabacteria group	826	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.57%
Host-Associated	Host-Associated	41.43%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.43%
Plants	Host-Associated → Plants	40.71%
Aquatic	Environmental → Aquatic	7.14%
Human	Host-Associated → Human	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.14%
Freshwater	Environmental → Aquatic → Freshwater	3.57%
Roots	Host-Associated → Plants → Roots	2.86%
Marine	Environmental → Aquatic → Marine	2.14%
Sediment	Environmental → Aquatic → Sediment	1.43%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.71%
Digestive System	Host-Associated → Human → Digestive System	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.43%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.71%
Loam	Environmental → Terrestrial → Soil → Loam	7.86%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.14%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.14%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.14%
Ice	Environmental → Aquatic → Freshwater → Ice	1.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.43%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.71%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.71%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.00%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	12.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.86%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.14%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.14%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.14%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.14%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.43%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.71%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.71%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.71%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	12.14%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.86%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.14%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.14%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.14%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.43%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.43%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.43%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.43%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.43%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.43%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.43%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.71%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.71%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.71%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.71%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.71%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.71%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300004013	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300005889	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012185	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ353 (21.06)	Environmental	Open in IMG/M
3300012501	Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014310	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017787	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ497 (22.06) (version 2)	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300022903	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L001-104B-6	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_15853240	2124908045	Soil	MVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVDEIDRLEADL
Ga0055472_101510412	3300003998	Natural And Restored Wetlands	MCTRLPRVAERLDEERLEILRAWGAGLSSSGRDELRAAGKAIVMLVEEIDRLQADVWM
Ga0055465_102443002	3300004013	Natural And Restored Wetlands	VVERLDEERLETLREWGAGLSTSARDELRAAGKAILMLVDEVD
Ga0062593_1034586291	3300004114	Soil	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVDEIDRLE
Ga0062589_1015171272	3300004156	Soil	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVDEIDRLEADLWN
Ga0062595_1011191281	3300004479	Soil	VVERLDEERLETLRAWGTGLSTSARDELRAAGKAILMLVDEIDRLEADLWNARADAKQSAAAAAA
Ga0062592_1002298871	3300004480	Soil	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVDEIDRLEADLWNARAATKQAEAAATAA
Ga0062591_1007280211	3300004643	Soil	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVDEIDRLEADLWNARAATKQAEAAATA
Ga0058861_100596902	3300004800	Host-Associated	VVERLDEERIEMLRSWGEGLQTSDRDELRASGRAILMLIEEIDRLEADLWN
Ga0066680_101032023	3300005174	Soil	VAERLDEERLERLRGWGAGLSDDARDEVRAAGRAILLLVAEIEHLQ
Ga0070670_1019251271	3300005331	Switchgrass Rhizosphere	VVERLDEERIEMLRSWGEGLQTSDRDELRASGRAILMLIEEIDRLEA
Ga0068869_1008829883	3300005334	Miscanthus Rhizosphere	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVDEID
Ga0070687_1009217271	3300005343	Switchgrass Rhizosphere	VVERLDEERIEMLRSSGAGLSTSDRDELRAAGRAILMLIEEIDRLEADIWNERAAAIQAAGEQPSSQSL
Ga0070692_112479521	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVDEIDRLEADLWNSRAATKQAETEATAAKQV
Ga0070675_1000803721	3300005354	Miscanthus Rhizosphere	VEYAARVVERLDEERLETLRAWGTGLSTSARDELRAAGKAILMLVDEIDRLEADLWNA
Ga0070675_1017428771	3300005354	Miscanthus Rhizosphere	VVERLDEERIEMLRSWGAGLSTSDRDELRAAGRAILMLIEEIDRLEADIWNERAAAIQAAGEQPSS
Ga0070671_1018744281	3300005355	Switchgrass Rhizosphere	VVERLDEERIEMLRSWGDGLQTSDRDELRAAGRAILMLIEEI
Ga0070688_1011287191	3300005365	Switchgrass Rhizosphere	VVERLDEERIEMLRSWGEGLQTSDRDELRASGRAILMLIEEIDRLEADLWHERA
Ga0070667_1002105131	3300005367	Switchgrass Rhizosphere	VVERLDEERIEMLRSWGEGLQTSDRDELRASGRAILMLIEEID
Ga0070700_1003075492	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VVERLDEDRIEMLRSWGDGLQTSDRDELRAAGRAILMLIEEIDRL
Ga0070700_1004552662	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VVERLDEERIEMLRSWGEGLQTSDRDELRASGRAILMLIEEIDRL
Ga0070694_1010406211	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	VVERLDEERLETLRAWGTGLSTSARDELRAAGKAILMLVDEIDRLEADLWN
Ga0070679_1013623141	3300005530	Corn Rhizosphere	VVERLDEERIEMLRSWGEGLQTSDRDELRAAGRAILMLIEEIDRLE
Ga0070695_1012415362	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVDEIDRLEA
Ga0070665_1017190272	3300005548	Switchgrass Rhizosphere	MLRSWGEGLQTSDRDELRAAGRAILMLIEEIDRLEADLWNERAEAIQAVSEHRSSASLASTL
Ga0070664_1007495623	3300005564	Corn Rhizosphere	VVERLDEERIEMLRSWGEGLQTSDRDELRASGRAILMLIEEIDRLEADLWHERAAAIQA
Ga0070702_1006079043	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VEYAARVVERLDEERLETLRAWGTGLSTSARDELRAAGKAILMLVDELDRLEADLWN
Ga0068864_1006499511	3300005618	Switchgrass Rhizosphere	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVDEIDR
Ga0068866_105481991	3300005718	Miscanthus Rhizosphere	VVERLDEDRIEMLRSWGEGLQTSDRDELRAAGRAILMLI
Ga0068863_1008711251	3300005841	Switchgrass Rhizosphere	VVERLDEERLETLRTWGAGLSTSARDELRAAGKAILMLVDEIDRLEADLWNARAAT
Ga0068858_1003791393	3300005842	Switchgrass Rhizosphere	VVERLDEERLETLRTWGAGLSTSARDELRAAGKAILMLVDEIDRLEA
Ga0068862_1007992651	3300005844	Switchgrass Rhizosphere	VVERLDEERIEMLRSWGAGLSTSDRDELRAAGRAILMLIEEIDRLEADIWNERAAAIQAAGEQPSSQSLAT
Ga0068862_1012299943	3300005844	Switchgrass Rhizosphere	VVERLDEERLETLRAWGTGLSTSARDELRAAGKAILMLVDE
Ga0075289_10320961	3300005888	Rice Paddy Soil	VVERLDEERLETLRNWGAGLSTSARDELRAAGKAILMLVDEIDRLEA
Ga0075290_10214262	3300005889	Rice Paddy Soil	VVERLDEERLETLRNWGAGLSTSARDELRAAGKAILMLVDEIDRLEADLWNARADAKEALAQATASRAEPAPVVEPA
Ga0075365_112742902	3300006038	Populus Endosphere	MGQSPVRWLCTRLPRVAERLDEERLEVLRTWGAGLSASGRDELRAAGKAIVMLIDEIDRL
Ga0075367_101313734	3300006178	Populus Endosphere	VVERLDEERLETLRTWGAGLSTSARDELRAAGKAILMLVDEIDRLEADLWNARAATKQAEASAEAARQAEASAC
Ga0075021_101962005	3300006354	Watersheds	MVERLDEERLEILRGWGAGLASDDREELRAAGKAITVLIEEIDRLEIDLW
Ga0075424_1015340921	3300006904	Populus Rhizosphere	VVERLDEERLETLRAWGTGLSTSARDELRAAGKAILMLVDEIDRLE
Ga0075436_1009012822	3300006914	Populus Rhizosphere	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVDEIDRLEADLWNSRAAMKQAETEATAAKHVEA
Ga0105098_105841862	3300009081	Freshwater Sediment	VVERLDEERIEMLRSWGDGLSGSDRDELRAAGRAILMLIEEIDR
Ga0111539_120580992	3300009094	Populus Rhizosphere	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVDEIDRLEADLW
Ga0105245_113421852	3300009098	Miscanthus Rhizosphere	VVERLDEERIEMLRSWGEGLQTSDRDELRASGRAILMLIEEIDRLEADLWHERAAAIQAATEH
Ga0075418_130246101	3300009100	Populus Rhizosphere	MVERLDEERLEMLRSWGTGLSTSSRDELRAAGRAILMLVEEVDRLQVDVWNARAAVNQAVEQR
Ga0105091_101020422	3300009146	Freshwater Sediment	VVERLDEERIEMLRSWGDGLSGSDRDELRAAGRAILMLIEEIDRLEADIWNER
Ga0114129_104519601	3300009147	Populus Rhizosphere	MVERLDEERIEMLRSWGSGLSTSARDELRAAGKAILMLIDEVERLQVDAWN
Ga0114129_128412581	3300009147	Populus Rhizosphere	VAERLDEERLEILRAWGAGLSTSDRDELRAAGKAIVMLIEE
Ga0111538_116704841	3300009156	Populus Rhizosphere	VVERLDEERLETLRAWGTGLSTSARDELRAAGKAILMLVDEIDRLEADLWNARADAKQS
Ga0105092_108667222	3300009157	Freshwater Sediment	VVERLDEERIEMLRSWGDGLSGSDRDELRAAGRAILMLIEEIDRLEADIWNERAAHLQAGERSSQSLA
Ga0105238_127917112	3300009551	Corn Rhizosphere	VVERLDEERLETLRTWGAGLSTSARDELRAAGKAILMLVDEIDRLE
Ga0105249_104043941	3300009553	Switchgrass Rhizosphere	VEYAARVVERLDEERLETLRAWGTGLSTSARDELRAAGKAILMLVDELD
Ga0105249_131318611	3300009553	Switchgrass Rhizosphere	VVERLDEERIEMLRSWGAGLSTSDRDELRAAGRAIL
Ga0134128_111342311	3300010373	Terrestrial Soil	VVERLDEDRIEMLRSWGEGLQTSDRDELRAAGRAILMLIE
Ga0105239_124588031	3300010375	Corn Rhizosphere	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVDEIDRLEADLWNA
Ga0134122_133582822	3300010400	Terrestrial Soil	VVERLDEERIEMRRSWGEGLQTSDRDELRASGRAILMLIEEID
Ga0105246_103836391	3300011119	Miscanthus Rhizosphere	VVERLDEERIEMLRSWGEGLQTSDRDELRASGRAILMLIEEIDRLEADLWHER
Ga0136619_100064971	3300012185	Polar Desert Sand	MVERLDEERLELLRSWGAGLSSSPRDELRAAGKAILMLVEEVDRLKIDVWNARAAATQAAEQRSSQS
Ga0157351_10530461	3300012501	Unplanted Soil	VVERLDEERIEMLRSWGDGLQTSDRDELRAAGRAILMLIEEIDRLEADLWHERAAAIQAATEHRSS
Ga0157294_102218462	3300012892	Soil	VVERLDEERIEMLRSWGEGLQTSDRDELRASGRAILMLIEEIDRLEADLWNERAAAIQAATEHRSSA
Ga0157285_103337712	3300012897	Soil	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVDEI
Ga0157299_101934682	3300012899	Soil	VVERLDEERIEMLRSWGAGLSTSDRDELRAAGRAILMLIEEIDRLEAD
Ga0157299_102022631	3300012899	Soil	VVERLDEERIEMLRSWGEGLQTSDRDELRASGRAILMLIEEIDRLEADLWHERAAAIQAATEHRS
Ga0157291_100201252	3300012902	Soil	VVERLDEERIEMLRSWGAGLSTSDRDELRAAGRAILMLIEEIDRLEADIWNERAAAIQAAGE
Ga0157282_100717002	3300012904	Soil	VVERLDEERIEMLRSWGEGLQTSDRDELRASGRAILMLIEEI
Ga0157290_103702621	3300012909	Soil	VVERLDEERIEMLRSWGAGLSTSDRDELRAAGRAILMLIEEIDRLE
Ga0157301_100598383	3300012911	Soil	VVERLDEERIEMLRSWGEGLQTSDRDELRASGRAILMLIEEIDRLEADLWNERAAAIQAASEH
Ga0157306_101200042	3300012912	Soil	MVERLDEERLEMLRSWGTGLSTSSRDELRAAGRAILMLVEEVDRLQVDVWNARAAVNQAVEQRSSQSLA
Ga0164241_104401132	3300012943	Soil	VVERLDEERIEMLRSWGEGLQTSDRDELRAAGRAIGMLIEEIDRLEADLWHERAAAIQAASEH
Ga0164300_111581061	3300012951	Soil	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVDEIDRLEADLWNARAATKQAEASAEAARQAEAA
Ga0164298_108463292	3300012955	Soil	LVTDRLDEQKLEMLRAWGDGLSSDKRDELRAAGKAILMVI
Ga0164307_117538252	3300012987	Soil	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVDEIDRLEADLWNARAATKQAE
Ga0157371_110732342	3300013102	Corn Rhizosphere	VVERLDEERIEMLRSWGEGLQTSDRDELRASGRAILMLIEEIDRLEADLWHE
Ga0157369_101398551	3300013105	Corn Rhizosphere	VVERLDEERIEMLRSWGEGLQTSDRDELRASGRAILMLIEEIDRLEAD
Ga0163162_104991863	3300013306	Switchgrass Rhizosphere	VVERLDEERIEMLRSWGEGLQTSDRDELRASGRAILMLIEEIDRLEADLW
Ga0075331_11327201	3300014310	Natural And Restored Wetlands	RVVERLDEERLETLRAWGAGLSTSARDELRAAGKAILMLVDEIDRLEADLWNARADATQKATALDTDS*
Ga0163163_104002943	3300014325	Switchgrass Rhizosphere	VVERLDEERLETLRTWGAGLSTSARDELRAAGKAILMLVDEIDRLEADL*
Ga0157380_129162031	3300014326	Switchgrass Rhizosphere	VVERLDEERIEMLRSWGEGLQTSDRDEPRASGRAILMLIEEIDRLEADLWNERAAAIQAA
Ga0157377_110212621	3300014745	Miscanthus Rhizosphere	VVERLDEDRIEMLRSWGDGLQTSDRDELRAAGRAILMLIEEIDRLEADLWNERA
Ga0132256_1024340601	3300015372	Arabidopsis Rhizosphere	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVDEIDRLEADLWNARAATKQAEASAEAARQAEAAR
Ga0132255_1042041361	3300015374	Arabidopsis Rhizosphere	VVERLDEERIEMLRSWGEGLQTSDRDELRAAGRAILMLIEEI
Ga0183260_104624953	3300017787	Polar Desert Sand	MVERLDEERLELLRGWGSGLSTSPRDELRAAGKAILMLVEEIDRLQVDVWNAR
Ga0184618_100286093	3300018071	Groundwater Sediment	MDRLDEQKLEMLKAWGEGLSSDKRDELRAAGKAILMLIEEI
Ga0190268_117537452	3300018466	Soil	MCNRLPRVAERLDEERLEILRTWGTGLSTSGRDELRAAGKAIVMLIEEIDRLQADVW
Ga0190271_115781003	3300018481	Soil	MCNRLPRVAERLDEERLEILRTWGTGLSTSGRDELRAAGKAIVMLIEEIDRLQADVWMAG
Ga0173481_103337102	3300019356	Soil	MVERLDEERLEMLRSWGTGLSTSSRDELRAAGRAILMLVEEVDRL
Ga0193715_10088753	3300019878	Soil	VTDRLDEQKLEMLRAWGDGLSSDKRDELRAAGKAILMLIEE
Ga0193738_10356844	3300020020	Soil	MGQGTSRLMCNRLPRVAERLDEERLEILRTWGTGLSTSGRDELRAAGKAIVMLIEE
Ga0247786_10363143	3300022883	Soil	VVERLDEERLETLRTWGAGLSTTTRDELRAAGKAILMLVDEIDRLEADLWNAR
Ga0247786_11385931	3300022883	Soil	VVERLDEERLETLRTWGAGLSTSARDELRAAGKAILMLVDELDR
Ga0247774_10257933	3300022903	Plant Litter	VVERLDEERIEMLRSWGEGLQTSDRDELRASGRAILMLIEEIDRLEADLWNERAAAIQA
Ga0247790_101515092	3300022915	Soil	VVERLDEERLETLRAWGTGLSTSARDELRAAGKAILMLVDEIDRLEADLWNAR
Ga0247801_10521772	3300023064	Soil	VVERLDEERIEMLRSWGAGLSTSDRDELRAAGRAILMLIEEIDRLEADI
Ga0247799_10964371	3300023072	Soil	VEYAARVVERLDEERLETLRAWGTGLSTSARDELRAAG
Ga0247802_10738132	3300023077	Soil	VVERLDEERIEMLRSWGAGLSTSDRDELRAAGRAILMLIEEIDRLEADIWNERAAAIQAAGEQPS
Ga0210113_10221441	3300025796	Natural And Restored Wetlands	VVERLDEERLETLRAWGAGLSTSARDELRAAGKAILMLVDEIDRLEADLWNARADATQKATA
Ga0207642_102987041	3300025899	Miscanthus Rhizosphere	VVERLDEERIEMLRSWGEGLQTSDRDELRASGRAILMLIEEIDRLEADLWHERAAA
Ga0207680_101408023	3300025903	Switchgrass Rhizosphere	VVERLDEERIEMLRSWGDGLQTSDRDELRAAGRAILML
Ga0207660_100736264	3300025917	Corn Rhizosphere	VVERLDEERIEMLRSWGEGLQTSDRDELRASGRAILMLIEEIDRLEADL
Ga0207650_115217072	3300025925	Switchgrass Rhizosphere	VVERLDEERLETLRTWGAGLSTSARDELRAAGKAILMLVDEIDRLEADLWNARAATKQAEASAEAT
Ga0207687_102483101	3300025927	Miscanthus Rhizosphere	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVDEIDRLEADLWNAR
Ga0207687_102879912	3300025927	Miscanthus Rhizosphere	VVERLDEERIEMLRSWGAGLSTSDRDERRAAGRAILMLIEEMDR
Ga0207706_100312201	3300025933	Corn Rhizosphere	VVERLDEERLETLRAWGTGLSTSARDELRAAGKAILMLVDEIDRLEADLWNARA
Ga0207704_110210122	3300025938	Miscanthus Rhizosphere	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVDEIDRLEADLWNARAATKQAEAEAAAARESLRTGGGDVDWLMSTPV
Ga0207667_121425841	3300025949	Corn Rhizosphere	VVERLDEERIEMLRSWGEGLQTSDRDELRASGRAILMLIEEIDRLE
Ga0207651_112171732	3300025960	Switchgrass Rhizosphere	VVERLDEERLETLRTWGAGLSTTTRDELRAAGKAILMLVDEIDRLEADLWN
Ga0207658_107731481	3300025986	Switchgrass Rhizosphere	MLRSWGEGLQTSDRDELRASGRAILMLIEEIDRLEADLWNERAAAIQAATEHRS
Ga0207703_103406404	3300026035	Switchgrass Rhizosphere	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVD
Ga0207703_113938972	3300026035	Switchgrass Rhizosphere	VVERLDEERIEMLRSWGAGLSTSDRDELRAAGRAILMLIEEIDRLEADIWNERAAAIQAAGEQP
Ga0207678_111484942	3300026067	Corn Rhizosphere	VVERLDEDRIEMLRSWGDGLQTSDRDERRAAGRAILMLIEEIDRLEADLWNERAEAIQA
Ga0207708_100553554	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VVERLDEDRIEMLRSWGDGLQTSDRDELRAAGRAILMLIEEIDRLEADLWNERAEAIQAVSEHRSSASLA
Ga0207648_109791282	3300026089	Miscanthus Rhizosphere	MLRSWGEGLQTSDRDELRASGRAILMLIEEIDRLEADLWNERAAAIQAATEHRSSASL
Ga0209998_100709902	3300027717	Arabidopsis Thaliana Rhizosphere	VAERLDEERLEILRAWGAGLSTSDRDELRAAGKAIVMLIEEIDRLQADVWMAGEAA
Ga0209813_104779882	3300027866	Populus Endosphere	VVERLDEERLETLRTWGAGLSTSARDELRAAGKAILMLVDEIDRLEADLWNARAATKQAEASAEAARQAEAARV
Ga0209382_107381163	3300027909	Populus Rhizosphere	VVERLDEERLETLRAWGTGLSTSARDELRAAGKAILMLVDEI
Ga0268265_109727493	3300028380	Switchgrass Rhizosphere	VVERLDEERLETLRAWGTGLSTSARDELRAAGKAILMLVDEIDRLEADLWNARADAKQSAAAAAAAT
Ga0247828_104487923	3300028587	Soil	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAI
Ga0247828_109441801	3300028587	Soil	VVERLDEERLETLRTWGAGLSTSARDELRAAGKAILM
Ga0247823_109592742	3300028590	Soil	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVDE
Ga0247822_105585023	3300028592	Soil	VAERLDEDRLEILRTWGAGLSTSGRDELRAAGKAIVMLIEEIDRLQADVWMAREAAVQ
Ga0247821_106213212	3300028596	Soil	VVERLDEERIEMLRSWGAGLSTSDRDELRAAGRAILMLIEEIDRLEADIWNERAA
Ga0247821_108033432	3300028596	Soil	VVERLDEERLETLRTWGAGLSTSARDELRAAGKAILMLVDEIDRLEADLWNAR
Ga0307307_101333061	3300028718	Soil	VTDRLDEQKLEMLRAWGDGLSSDKRDELRAAGKAILMLIEEI
Ga0307315_101501501	3300028721	Soil	LVTDRLDEQKLEMLRAWGDGLSSDKRDELRAAGKAILMLIEEI
Ga0307282_100330363	3300028784	Soil	VTDRLDEQKLEMLRAWGDGLSSDKRDELRAAGKAILMLIEEIE
Ga0307503_101763482	3300028802	Soil	VVERLDEDRIEMLRSWGEGLQTSDRDELRAAGRAILMLIEEIDRLEADLWNERAEAI
Ga0247824_107888032	3300028809	Soil	VVERLDEERLETLRTWGAGLSTSARDELRAAGKAILMLVDELDRLEADLWNARAATKQAEAAAEVARQAEAAR
Ga0307292_100324553	3300028811	Soil	VTDRLDEQKLEMLRAWGDGLSSDKRDELRAAGKAILMLIEEIEL
Ga0247825_105922641	3300028812	Soil	MVERLDEERLETLREWGDGLSTNARDELRAAGKAILMLVDEIDRLQADVWNARAA
Ga0247827_113509012	3300028889	Soil	MVERLDEERLEMLRSWGTGLSTSSRDELRAAGRAILMLVEEVDRLQVDVWNARAAVNQAVEQRSSQ
Ga0247826_117191642	3300030336	Soil	VVERLDEERLETLRAWGTGLSTSARDELRAAGKAILMLVDEIDRLEAD
Ga0310886_100725591	3300031562	Soil	VVERLDEERIEMLRSWGEGLQTSDRDELRASGRAILM
Ga0310886_104112883	3300031562	Soil	VAERLDEERLEILRAWGAGLSTSDRDELRAAGKAIVMLIEEIDRLQA
Ga0318522_104060461	3300031894	Soil	MSDRLDSEQIELLRTWGAGLASDERDEVRAAGKAITMLVDEIDRLNID
Ga0307406_106669631	3300031901	Rhizosphere	MLRSWGTGLSTSSRDELRAAGRAILMLVEEVDRLQVDVWNARAAVNQAVEQ
Ga0308175_1027536022	3300031938	Soil	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVDEIDRLEADLWNARA
Ga0310906_101678601	3300032013	Soil	MGQSSARRLCTRLPRVAERLDEDRLEVLRTWGAGLSASGRDELRAAGKAIVMLIDEID
Ga0310906_103748963	3300032013	Soil	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILM
Ga0310899_100678341	3300032017	Soil	VVERLDEERIEMLRSWGEGLQTSDRDELRASGRAILMLIEEIDRLEADLWHERAAAIQ
Ga0247829_107158233	3300033550	Soil	VEYAARVVERLDEERLETLRAWGTGLSTSARDELRAAGKAILMLVDERFDEVER
Ga0373959_0062677_653_826	3300034820	Rhizosphere Soil	VVERLDEERLETLRTWGAGLSTNARDELRAAGKAILMLVDEIDRLEADLWNSRAATKQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054168

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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