Metagenome / Metatranscriptome Family F054232

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054232
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	81 residues
Representative Sequence	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIASDGSVGWDPVSIFGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Number of Associated Samples	115
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.14 %
% of genes near scaffold ends (potentially truncated)	30.71 %
% of genes from short scaffolds (< 2000 bps)	72.14 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.429 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (19.286 % of family members)
Environment Ontology (ENVO)	Unclassified (45.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (42.143 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 66.67% β-sheet: 0.00% Coil/Unstructured: 33.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF02371	Transposase_20	4.29
PF03544	TonB_C	3.57
PF05593	RHS_repeat	2.86
PF07690	MFS_1	2.86
PF13411	MerR_1	2.86
PF13646	HEAT_2	1.43
PF00135	COesterase	1.43
PF14534	DUF4440	1.43
PF00069	Pkinase	1.43
PF02381	MraZ	1.43
PF00072	Response_reg	0.71
PF00912	Transgly	0.71
PF03551	PadR	0.71
PF01035	DNA_binding_1	0.71
PF01641	SelR	0.71
PF04879	Molybdop_Fe4S4	0.71
PF03781	FGE-sulfatase	0.71
PF02606	LpxK	0.71
PF13620	CarboxypepD_reg	0.71
PF02566	OsmC	0.71
PF00688	TGFb_propeptide	0.71
PF02880	PGM_PMM_III	0.71
PF14384	BrnA_antitoxin	0.71
PF01165	Ribosomal_S21	0.71
PF03695	UPF0149	0.71
PF08388	GIIM	0.71
PF14300	DUF4375	0.71
PF03169	OPT	0.71
PF14317	YcxB	0.71
PF10011	DUF2254	0.71
PF16640	Big_3_5	0.71
PF08338	DUF1731	0.71
PF03840	SecG	0.71
PF14081	DUF4262	0.71
PF00482	T2SSF	0.71
PF10282	Lactonase	0.71
PF12838	Fer4_7	0.71
PF09594	GT87	0.71
PF00781	DAGK_cat	0.71
PF05649	Peptidase_M13_N	0.71
PF07883	Cupin_2	0.71
PF07244	POTRA	0.71
PF04366	Ysc84	0.71
PF01098	FTSW_RODA_SPOVE	0.71
PF01527	HTH_Tnp_1	0.71
PF12867	DinB_2	0.71
PF13328	HD_4	0.71
PF07885	Ion_trans_2	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	5.71
COG3547	Transposase	Mobilome: prophages, transposons [X]	4.29
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	3.57
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	2.86
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	1.43
COG2001	MraZ, DNA-binding transcriptional regulator and inhibitor of RsmH methyltransferase activity	Translation, ribosomal structure and biogenesis [J]	1.43
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	1.43
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	0.71
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.71
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	0.71
COG0772	Peptodoglycan polymerase FtsW/RodA/SpoVE	Cell cycle control, cell division, chromosome partitioning [D]	0.71
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	0.71
COG1090	NAD dependent epimerase/dehydratase family enzyme	General function prediction only [R]	0.71
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	0.71
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG1297	Predicted oligopeptide transporter, OPT family	General function prediction only [R]	0.71
COG1314	Protein translocase subunit SecG	Intracellular trafficking, secretion, and vesicular transport [U]	0.71
COG1663	Tetraacyldisaccharide-1-P 4'-kinase (Lipid A 4'-kinase)	Cell wall/membrane/envelope biogenesis [M]	0.71
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.71
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.71
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.71
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.71
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.71
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.71
COG3079	Uncharacterized conserved protein YgfB, UPF0149 family	Function unknown [S]	0.71
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG3695	Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain	Transcription [K]	0.71
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	0.71
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.43 %
Unclassified	root	N/A	33.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.43 %
Unclassified	root	N/A	33.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.43 %
Unclassified	root	N/A	33.57 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.86 %
Unclassified	root	N/A	33.57 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.71 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.57 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	15.71 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.29 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.43 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.71 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.71 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.29 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.43 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.71 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.71 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.29 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.71 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.71 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.71 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	2.86 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.71 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.71 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.71 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.71 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.43 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	1.43 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.71 %
Granulicella arctica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	0.71 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.71 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.71 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1.43 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.43 %
unclassified Candidatus Udaeobacter	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter	0.71 %
Granulicella arctica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	0.71 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.71 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.57 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.71 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1.43 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1.43 %
Candidatus Udaeobacter sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	0.71 %
Granulicella arctica	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	0.71 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.71 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000546\|LJNas_1000143	All Organisms → cellular organisms → Bacteria → Acidobacteria	11314	Open in IMG/M
3300001084\|JGI12648J13191_1011711	All Organisms → cellular organisms → Bacteria → Acidobacteria	849	Open in IMG/M
3300001356\|JGI12269J14319_10027040	All Organisms → cellular organisms → Bacteria	3912	Open in IMG/M
3300001546\|JGI12659J15293_10007391	All Organisms → cellular organisms → Bacteria	3171	Open in IMG/M
3300001546\|JGI12659J15293_10097911	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300002245\|JGIcombinedJ26739_101727310	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300004091\|Ga0062387_100031472	All Organisms → cellular organisms → Bacteria	2348	Open in IMG/M
3300004091\|Ga0062387_100323531	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1005	Open in IMG/M
3300005436\|Ga0070713_100273248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1548	Open in IMG/M
3300005467\|Ga0070706_100230789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1728	Open in IMG/M
3300005468\|Ga0070707_100402243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1329	Open in IMG/M
3300005591\|Ga0070761_10221394	Not Available	1126	Open in IMG/M
3300005921\|Ga0070766_10260551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1102	Open in IMG/M
3300006028\|Ga0070717_10175343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1866	Open in IMG/M
3300006052\|Ga0075029_100140017	Not Available	1480	Open in IMG/M
3300006059\|Ga0075017_100320558	All Organisms → cellular organisms → Bacteria → Acidobacteria	1148	Open in IMG/M
3300006086\|Ga0075019_10396290	Not Available	844	Open in IMG/M
3300006175\|Ga0070712_100221491	Not Available	1498	Open in IMG/M
3300006893\|Ga0073928_10012729	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9568	Open in IMG/M
3300007258\|Ga0099793_10081135	Not Available	1480	Open in IMG/M
3300009038\|Ga0099829_10802108	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300009143\|Ga0099792_11096669	Not Available	536	Open in IMG/M
3300009518\|Ga0116128_1011878	All Organisms → cellular organisms → Bacteria	3095	Open in IMG/M
3300009518\|Ga0116128_1070572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1068	Open in IMG/M
3300009522\|Ga0116218_1018088	All Organisms → cellular organisms → Bacteria	3121	Open in IMG/M
3300009524\|Ga0116225_1139793	Not Available	1108	Open in IMG/M
3300009616\|Ga0116111_1004850	All Organisms → cellular organisms → Bacteria	6798	Open in IMG/M
3300009616\|Ga0116111_1063927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1013	Open in IMG/M
3300009617\|Ga0116123_1041443	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1345	Open in IMG/M
3300009621\|Ga0116116_1096583	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300009623\|Ga0116133_1011639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2178	Open in IMG/M
3300009624\|Ga0116105_1011616	Not Available	1796	Open in IMG/M
3300009630\|Ga0116114_1082855	Not Available	868	Open in IMG/M
3300009630\|Ga0116114_1133124	Not Available	643	Open in IMG/M
3300009634\|Ga0116124_1083808	Not Available	910	Open in IMG/M
3300009645\|Ga0116106_1148182	Not Available	751	Open in IMG/M
3300009700\|Ga0116217_10385839	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300009762\|Ga0116130_1071528	Not Available	1089	Open in IMG/M
3300009762\|Ga0116130_1127727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300009764\|Ga0116134_1000924	All Organisms → cellular organisms → Bacteria	15005	Open in IMG/M
3300009824\|Ga0116219_10499988	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300010343\|Ga0074044_10176514	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M
3300010343\|Ga0074044_10711242	Not Available	656	Open in IMG/M
3300010379\|Ga0136449_100447124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2269	Open in IMG/M
3300011270\|Ga0137391_10458252	All Organisms → cellular organisms → Bacteria → Acidobacteria	1084	Open in IMG/M
3300011270\|Ga0137391_10633733	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300012096\|Ga0137389_10988498	Not Available	721	Open in IMG/M
3300012189\|Ga0137388_10221204	All Organisms → cellular organisms → Bacteria	1714	Open in IMG/M
3300012200\|Ga0137382_10303931	Not Available	1113	Open in IMG/M
3300012205\|Ga0137362_11281735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300012361\|Ga0137360_10083926	All Organisms → cellular organisms → Bacteria → Acidobacteria	2397	Open in IMG/M
3300012923\|Ga0137359_10639557	Not Available	930	Open in IMG/M
3300012927\|Ga0137416_10509261	Not Available	1038	Open in IMG/M
3300012937\|Ga0162653_100074276	Not Available	551	Open in IMG/M
3300012944\|Ga0137410_10000267	All Organisms → cellular organisms → Bacteria	37346	Open in IMG/M
3300014155\|Ga0181524_10202270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	971	Open in IMG/M
3300014156\|Ga0181518_10242127	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300014158\|Ga0181521_10306127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300014158\|Ga0181521_10627886	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300014165\|Ga0181523_10001462	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	25076	Open in IMG/M
3300014165\|Ga0181523_10046092	All Organisms → cellular organisms → Bacteria	2726	Open in IMG/M
3300014489\|Ga0182018_10003434	All Organisms → cellular organisms → Bacteria → Acidobacteria	14243	Open in IMG/M
3300014492\|Ga0182013_10000025	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	166371	Open in IMG/M
3300014638\|Ga0181536_10159065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1176	Open in IMG/M
3300016730\|Ga0181515_1159662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	969	Open in IMG/M
3300017822\|Ga0187802_10440524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300017823\|Ga0187818_10014302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3391	Open in IMG/M
3300017823\|Ga0187818_10203114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300017925\|Ga0187856_1007857	All Organisms → cellular organisms → Bacteria	6491	Open in IMG/M
3300017925\|Ga0187856_1018114	All Organisms → cellular organisms → Bacteria	3692	Open in IMG/M
3300017925\|Ga0187856_1098713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1166	Open in IMG/M
3300017933\|Ga0187801_10491156	Not Available	518	Open in IMG/M
3300017934\|Ga0187803_10143981	Not Available	937	Open in IMG/M
3300017938\|Ga0187854_10117632	Not Available	1232	Open in IMG/M
3300017938\|Ga0187854_10381181	Not Available	593	Open in IMG/M
3300017940\|Ga0187853_10085357	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300017940\|Ga0187853_10250225	Not Available	814	Open in IMG/M
3300017940\|Ga0187853_10478322	Not Available	545	Open in IMG/M
3300017941\|Ga0187850_10085992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1547	Open in IMG/M
3300017955\|Ga0187817_10791835	Not Available	605	Open in IMG/M
3300018003\|Ga0187876_1218351	Not Available	633	Open in IMG/M
3300018005\|Ga0187878_1034863	All Organisms → cellular organisms → Bacteria	2413	Open in IMG/M
3300018005\|Ga0187878_1098523	Not Available	1198	Open in IMG/M
3300018007\|Ga0187805_10309511	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300018015\|Ga0187866_1059690	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1694	Open in IMG/M
3300018016\|Ga0187880_1074457	All Organisms → cellular organisms → Bacteria → Acidobacteria	1734	Open in IMG/M
3300018019\|Ga0187874_10179516	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300018020\|Ga0187861_10055424	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2046	Open in IMG/M
3300018021\|Ga0187882_1061285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	1729	Open in IMG/M
3300018021\|Ga0187882_1152979	Not Available	936	Open in IMG/M
3300018025\|Ga0187885_10203928	Not Available	916	Open in IMG/M
3300018026\|Ga0187857_10197689	Not Available	939	Open in IMG/M
3300018033\|Ga0187867_10034636	Not Available	3124	Open in IMG/M
3300018044\|Ga0187890_10001081	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	19804	Open in IMG/M
3300018044\|Ga0187890_10873733	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300018047\|Ga0187859_10421962	Not Available	735	Open in IMG/M
3300018057\|Ga0187858_10269263	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300018057\|Ga0187858_10948316	Not Available	505	Open in IMG/M
3300019882\|Ga0193713_1026335	All Organisms → cellular organisms → Bacteria	1714	Open in IMG/M
3300019888\|Ga0193751_1015014	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella arctica	3956	Open in IMG/M
3300020580\|Ga0210403_10001018	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	27512	Open in IMG/M
3300020583\|Ga0210401_10422717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1195	Open in IMG/M
3300021168\|Ga0210406_10015742	All Organisms → cellular organisms → Bacteria	7193	Open in IMG/M
3300021171\|Ga0210405_10372388	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1126	Open in IMG/M
3300021432\|Ga0210384_10000931	All Organisms → cellular organisms → Bacteria	41951	Open in IMG/M
3300021432\|Ga0210384_10544277	All Organisms → cellular organisms → Bacteria → Acidobacteria	1044	Open in IMG/M
3300022557\|Ga0212123_10015344	All Organisms → cellular organisms → Bacteria → Acidobacteria	9576	Open in IMG/M
3300025442\|Ga0208034_1020589	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1808	Open in IMG/M
3300025454\|Ga0208039_1011322	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2159	Open in IMG/M
3300025500\|Ga0208686_1133701	Not Available	507	Open in IMG/M
3300025910\|Ga0207684_10460794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1091	Open in IMG/M
3300026354\|Ga0257180_1070230	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300026446\|Ga0257178_1037493	Not Available	615	Open in IMG/M
3300026482\|Ga0257172_1054743	Not Available	731	Open in IMG/M
3300026508\|Ga0257161_1024611	Not Available	1164	Open in IMG/M
3300027565\|Ga0209219_1157709	Not Available	543	Open in IMG/M
3300027604\|Ga0208324_1010379	All Organisms → cellular organisms → Bacteria	3036	Open in IMG/M
3300027645\|Ga0209117_1054613	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300027674\|Ga0209118_1114921	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300027853\|Ga0209274_10703019	Not Available	521	Open in IMG/M
3300027854\|Ga0209517_10068500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2536	Open in IMG/M
3300027862\|Ga0209701_10044763	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2853	Open in IMG/M
3300027889\|Ga0209380_10149016	All Organisms → cellular organisms → Bacteria → Acidobacteria	1367	Open in IMG/M
3300027895\|Ga0209624_10001932	All Organisms → cellular organisms → Bacteria → Acidobacteria	15748	Open in IMG/M
3300027898\|Ga0209067_10914654	Not Available	516	Open in IMG/M
3300027905\|Ga0209415_10002727	All Organisms → cellular organisms → Bacteria → Acidobacteria	33031	Open in IMG/M
3300027905\|Ga0209415_10211112	All Organisms → cellular organisms → Bacteria	1814	Open in IMG/M
3300027911\|Ga0209698_10374392	All Organisms → cellular organisms → Bacteria → Acidobacteria	1116	Open in IMG/M
3300028536\|Ga0137415_10094721	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	2839	Open in IMG/M
3300030058\|Ga0302179_10005040	All Organisms → cellular organisms → Bacteria	7307	Open in IMG/M
3300030399\|Ga0311353_10812372	Not Available	797	Open in IMG/M
3300031234\|Ga0302325_10962418	Not Available	1173	Open in IMG/M
3300031715\|Ga0307476_10856408	Not Available	671	Open in IMG/M
3300031753\|Ga0307477_10393435	Not Available	950	Open in IMG/M
3300031754\|Ga0307475_10023423	All Organisms → cellular organisms → Bacteria	4381	Open in IMG/M
3300031754\|Ga0307475_10374547	All Organisms → cellular organisms → Bacteria	1144	Open in IMG/M
3300031754\|Ga0307475_11296233	Not Available	564	Open in IMG/M
3300032160\|Ga0311301_11234946	All Organisms → cellular organisms → Bacteria → Acidobacteria	953	Open in IMG/M
3300033405\|Ga0326727_10000470	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	167440	Open in IMG/M
3300033405\|Ga0326727_10268525	Not Available	1731	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.29%
Host-Associated	Host-Associated	0.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.71%
Aquatic	Environmental → Aquatic	48.57%
Plants	Host-Associated → Plants	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.43%
Freshwater	Environmental → Aquatic → Freshwater	43.57%
Sediment	Environmental → Aquatic → Sediment	3.57%
Peat	Environmental → Terrestrial → Peat	3.57%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.43%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.71%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	43.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	30.71%
Loam	Environmental → Terrestrial → Soil → Loam	12.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.86%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.43%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	25.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	12.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.57%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.57%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.57%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.43%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.43%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.43%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	19.29%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	12.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.71%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	5.00%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.29%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.86%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.14%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.43%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.43%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.43%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.43%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.71%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.71%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.71%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000546	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled	Host-Associated	Open in IMG/M
3300001084	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009617	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100	Environmental	Open in IMG/M
3300009621	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009634	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_150	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300016730	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300025454	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LJNas_10001432	3300000546	Quercus Rhizosphere	MRWVLLFFGSLASGVLTIVLSLALLLASLYIYAGYVLGIASDGAVGWDPVSIYGRYWVIGIPVLIFGLGCSVGFWFLSERLQR*
JGI12648J13191_10117111	3300001084	Forest Soil	MRWIFVFLGSLATGALTIVVSLVLLLVSLSIYARYVLGMASNEAAGWDPVSLFGRYWKLGVIGIPVSDVRPRLQ
JGI12269J14319_100270403	3300001356	Peatlands Soil	MRWVLLFSGSLAAGVLAIVLALALLLLSLSLYVRYVLGIASNGSVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFLSKRLHR*
JGI12659J15293_100073912	3300001546	Forest Soil	MRWILVCLGSLATGILAIVLSLALLLVSLFIYDRYIPGIASNGSVGWGPVSIFGRWVIGIPLLISGLGCSSGFWFLNKRLHR*
JGI12659J15293_100979112	3300001546	Forest Soil	MRWIFVFLGSLATGALTIVVSLVLLLVSLSIYARYVLGMASNEAAGWDPVSLFGRYWKLGVIGIPVSDVRPRLQLGLLVS*
JGIcombinedJ26739_1017273102	3300002245	Forest Soil	MRWVLLCFGSLATGVLAIVLSVALLLVSLAMYDRYILGITSNGAVGWDPVSIFGRWVIGIPLLIFGLGCSAGFRFLSKRLHR*
Ga0062387_1000314722	3300004091	Bog Forest Soil	MRRVLVFLGSVATGIFAIVLSLALLLVSLSIYDRYVLGITSNGAVGWDPVSIFGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0062387_1003235312	3300004091	Bog Forest Soil	MRWVLLFFGSLAAGVLAIVLSLALLLVSLSIYAKYVLRIASDGSVGWDPISIYGGSWVIGVPLLILGLGCSSGFWFLSKRLHR*
Ga0070713_1002732481	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRWILLLFGSLATGVLTIVLSLALLVVSLSIYDRYVLGIASNGSVGWDPVSIYGKPAVISIPLLIFSFGCSVGFFFLNKRL
Ga0070706_1002307892	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRWILLLLGSLATGVLTIVLSLALLLVSLSIYDRYVLGIASNGSVGWDPVSIYGKPAVISIPLLIFGFGCSVGFFFLNKRLHR*
Ga0070707_1004022433	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIASDGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0070761_102213942	3300005591	Soil	VLAIVLSLTLLLVSLSIYGRYVLGITSDGSVGWDPISIFGRWVIGIPLLIFGLGCSVGFWFLSKRLHR*
Ga0070766_102605512	3300005921	Soil	MRWVLLCFGSLATGVLAIVLSLALLLVSLAMYDRYILGITSNGAVGWDPVSIFGRWVIGIPLLIFGLGCSAGFRFLSKRLHR*
Ga0070717_101753433	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRWILLLFGSLATGVLTIVLSLALLVVSLSIYDRYVLGIASNGSVGWDPASIYGKPAVISIPLLIFGFGCSVGFFFLNKRLHRFT*
Ga0075029_1001400172	3300006052	Watersheds	MRWVLLFFGSLAAGVLAIVLSPALLLVSLSVYGRYVLGVASNESVGWDPVSIFGRWVIGIPLLIFGLGCSAGLWFLSKRLHR*
Ga0075017_1003205582	3300006059	Watersheds	MRWVLLFFGSLAAGVLAIVLSLALLLVSRFVYGRDVLGVASNESVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0075019_103962902	3300006086	Watersheds	FMRWVLLFFGSLAAGVLAIVLSPALLLVSLSVYGRYVLGVASNESVGWDPVSIFGRWVIGIPLLIFGLGCSAGLWFLSKRLHR*
Ga0070712_1002214911	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRWILLLFGSLATGVLTIVLSLALLVVSLSIYDRYVLGIASNGSVGWDPASIYGKPAVISIPLLIFGFGCSVGFFFLNKRLHR*
Ga0073928_1001272910	3300006893	Iron-Sulfur Acid Spring	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRHVLGIASNGSVGWDPVSIYGRYWVISIPLLIFGLGCSAGFWFLSKRLHR*
Ga0099793_100811353	3300007258	Vadose Zone Soil	MRWVLLFFGSLATGVLAIVLSLALLLVSLAIYDRYILGITSNGAVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0099829_108021082	3300009038	Vadose Zone Soil	MRWVLLFFGSLATGVLAIVLSLALLLVSLSIYDRYILGIASNGAVGWDPVSIFGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0099792_110966691	3300009143	Vadose Zone Soil	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRHVLGIASNGSVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0116128_10118783	3300009518	Peatland	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIAADGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFLFLSKRLHR*
Ga0116128_10705722	3300009518	Peatland	MRWVLLFFGSLATGVLAIVLSLALLLVSLSIYDRFVLGIASNGAVGWDPVSIFGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0116218_10180882	3300009522	Peatlands Soil	MRWVLLFSGSLAAGVLAIVLALALLLVSLSLYVRYVLGIASNGSVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0116225_11397931	3300009524	Peatlands Soil	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIASDGSVGWDPVSIYGRYWVVGIPLLIFGLGCSAGFWFISKRLHR*
Ga0116111_10048501	3300009616	Peatland	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGITSDGAVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKR
Ga0116111_10639274	3300009616	Peatland	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIASDGAVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKR
Ga0116123_10414432	3300009617	Peatland	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIAADGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0116116_10965831	3300009621	Peatland	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIAADGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAG
Ga0116133_10116393	3300009623	Peatland	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYVRYVLGIASNGSVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0116105_10116161	3300009624	Peatland	MRWIVVWLGSLATGVLTIVLSLALLLVSLSVYDRYVFGNASNGSVGWDFISLFGRYWKLGVIGIPLLIFGLGCSVGFWFLSKRVHG*
Ga0116114_10828551	3300009630	Peatland	MRWVLLFFGSLATGVLTIVLSLASLLVSLSVYDRYVLGIASDGAVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0116114_11331241	3300009630	Peatland	MRWVLLFFGSLAAGVLAIVLSLALLLVSLSIYVRYVLGIASNGSVGWDPVSIFGRWVIGIPLLIFGLGCSTGFWFLSKRLHR*
Ga0116124_10838082	3300009634	Peatland	MRWVLLFFGSLAAGVLAIVLSLALLLVSLSIYVRYVLGIASNGAVGWDPVSIFGRWVIGIPLLIFALGCSTGFWFLSKRLHR*
Ga0116106_11481821	3300009645	Peatland	MRWVLLFFGSLAAGVLAIVLSLALLLVSLSIYARYVLGIASNGAVGWDPVSIFGRWVIGIPLLIFGLGCSTGFWFLSKRLHR*
Ga0116217_103858392	3300009700	Peatlands Soil	GVLTIVLSLALLLVSLSIYDRYVLGIASDGSVGWDPVSIYGRYWVVGIPLLIFGLGCSAGFWFISKRLHR*
Ga0116130_10715282	3300009762	Peatland	MRWVLLFFGSLAAGVLAIVLSLALLLVSLSIYVRYVLGIASNGSVGWDPVSIFGRWVIGIPLLIFALGCSTGFWFLSKRLHR*
Ga0116130_11277271	3300009762	Peatland	VLAIVLSLALLLVSLSIYDRYVLGIASDGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0116134_10009244	3300009764	Peatland	MRWVLLFFGSLATGVLTIVLSLAFLLVSLSVYDRHVLGIASDGAVGWDPVSIYGLYWVIGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0116219_104999881	3300009824	Peatlands Soil	ITLVDQLSGLECVMRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIASDGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0074044_101765142	3300010343	Bog Forest Soil	MRWIFVILGSLASGVLALVLSVTLLSASLYIYAKYVLGIVSNGSVGWDPVSFFGRYWKLGVIGIPILIFGLGCTAGFLFLKKWLLGGTSLP*
Ga0074044_107112421	3300010343	Bog Forest Soil	MRRVLLFFGSLATGVLTIVLSLALLLVSLSVYERYVLGIASDGAVGWDPVSIYGRYWVIGLPLLIFGLGCSVGFWFLSRRLHR*
Ga0136449_1004471244	3300010379	Peatlands Soil	FFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIASDGSVSWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0137391_104582521	3300011270	Vadose Zone Soil	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIASDGSVGWDPVSIYGLYWVIGIPLLIFGLGCSAGFW
Ga0137391_106337332	3300011270	Vadose Zone Soil	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRHVLGIASNGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0137389_109884981	3300012096	Vadose Zone Soil	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIASDGSVGWDPVSIYGLYWVIGIPLLIFGLGCSAGFWFLSKRLHRKTSGP*
Ga0137388_102212042	3300012189	Vadose Zone Soil	MRWVLLFFGSLATGVLTIVLSLALLLVSLVIYDRYILGIVSDGSVGWDPVSIYGRYWVMGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0137382_103039313	3300012200	Vadose Zone Soil	MRWVLLFFGSLATGVLAIVLSLALLLVSLAIYDRYILGITSNGSVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0137362_112817352	3300012205	Vadose Zone Soil	GLECVMRWILVCLGSLATGVLTIVLSLALLLLSLSVYDRYVLGIASNEAVGWDPVSLFGRYWKLGVIGIPLLIFGLGYSVGFWFLSKRLHG*
Ga0137360_100839261	3300012361	Vadose Zone Soil	MRWVLLFFGSLATGVLAIVLSLALLLVSLAIYDRYILGITSNGAVGWDPVSIFGRWVIGIPLLIFGLG
Ga0137359_106395572	3300012923	Vadose Zone Soil	MRWVLLFFGSLATGVLAIVLSLALLLVSLAIYDRYILGITSNGSVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFL
Ga0137416_105092612	3300012927	Vadose Zone Soil	MRWVLLFFGSLATGVLAIVLSLALLLVSLAIYDRYILGITTNGAVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0162653_1000742762	3300012937	Soil	WIVVRLGSLASGVLTIIASLVLLLVSLTIYERYVLRIASNEAVGWDPVSFFGQYWQVGVIGIPLLIFAFGCSLGFWVLQRRLFR*
Ga0137410_1000026727	3300012944	Vadose Zone Soil	MRWVLLFLGSLATGVLTIVLSLALLFVSLSIYGRYVLGIGSNEAVGWDPVSLFGRYWKLGVIGIPLLIFGLGCSLGFWFLSKRLHP*
Ga0181524_102022701	3300014155	Bog	MRWVLLFFGSLAAGVLAIVLSLALLLVSLSIYVRYVLGIASNGSVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0181518_102421272	3300014156	Bog	GVLAIVLSLALLLVSLSIYARYVLGIASNGAVGWDPVSIVGRWVIGIPLFIFGLGCSAGFWFLSKRLHR*
Ga0181521_103061272	3300014158	Bog	MRWVLLFFGSLAAGVLAIVLSLALLLVSLSIYARYVLGIASNGAVGWDPVSIVGRWVIGIPLFIFGLGCSAGFWFLSKRLHR*
Ga0181521_106278861	3300014158	Bog	LSGLECLMRWVLLFFGSLATGVLTIVLSLASLLVSLSVYDRYVLGIASDGAVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0181523_1000146221	3300014165	Bog	LATGVLTIVLSLALLLVSLSIYDRYVLGIASDGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR*
Ga0181523_100460925	3300014165	Bog	MRWVLLFFGSLATGVLTIVLSLAFLLVSLSVYDRYVLGIASDGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSTRLHR*
Ga0182018_100034349	3300014489	Palsa	MRWVLLSFGSLAAGVLAIVLSLVLLLVSLSIYDRYVLGIASNGSVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFVSKRLHR*
Ga0182013_1000002570	3300014492	Bog	MRRVLLFFGSLATGVLTIVLSLALLVVSLSMYDRYVLGIASDGSIGWDPVSIYGRYWVIGIPLLIFGLGCSAGYWFLRKRLHR*
Ga0181536_101590652	3300014638	Bog	VLAIVLSLALLLVSLSIYARYVLGIASNGAVGWDPVSIVGRWVIGIPLFIFGLGCSAGFWFLSKRLHR*
Ga0181515_11596622	3300016730	Peatland	VLAIVLSLALLLVSLSIYVRYVLGIASNGSVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0187802_104405242	3300017822	Freshwater Sediment	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLEIASDGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0187818_100143023	3300017823	Freshwater Sediment	MRWVLLFFGSLATGVLAIVLSLALLLVSLSIYDRYVLGIASNGAVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0187818_102031141	3300017823	Freshwater Sediment	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIASDGSVGLDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0187856_10078574	3300017925	Peatland	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIAADGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFLFLSKRLHR
Ga0187856_10181147	3300017925	Peatland	MRWVLLFFGSLATGVLAIVLSLALLLVSLSIYDRFVLGIASNGAVGWDPVSIFGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0187856_10987132	3300017925	Peatland	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIASDGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0187801_104911561	3300017933	Freshwater Sediment	MRWVLLFFGSLAAGVLAIVLSLALLLVSLSIYDRYVLGIASDGSVGWDPVSIYGRYWVVGIPLLIFGLGCSAGFWFLSKRLHR
Ga0187803_101439812	3300017934	Freshwater Sediment	MLSKNPITLVDQVSGLECLMRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIASDGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0187854_101176321	3300017938	Peatland	MRWVLLFFGSLATGVLTIVLSLASLLVSLSVYDRYVLGIASDGAVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0187854_103811812	3300017938	Peatland	MRWVLLFFGSLAAGVLAIVLSLALLLVSLSIYVRYVLGIASNGSVGWDPVSIFGRWVIGIPLLIFALGCSTGFWFLSKRLHR
Ga0187853_100853571	3300017940	Peatland	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIAADGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWF
Ga0187853_102502252	3300017940	Peatland	MRWVLLFFGSLAAGVLAIVLSLALLLVSLSIYARYVLGIASNGAVGWDPVSIFGRWVIGIPLLIFGLGCSTGFWFLSKRLHR
Ga0187853_104783221	3300017940	Peatland	MRWVLLFFGSLATGVLTIVLSLASLLVSLSVYDRYVLGIASDGAVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWF
Ga0187850_100859922	3300017941	Peatland	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIASDGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKR
Ga0187817_107918351	3300017955	Freshwater Sediment	AAGVLAIVLSLALLLVSLSICVRYQGIASNGAVGWDPVSIFGRWVIGIPLFIFALGCSAGFWFLSKRLHR
Ga0187876_12183511	3300018003	Peatland	MRWVLLFFGSLATGVLTIVLSLASLLVSLSVYDRYVLGIASDGSVGWDPVSIYGRYWVIGIPLLIFGL
Ga0187878_10348635	3300018005	Peatland	RWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIAADGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFLFLSKRLHR
Ga0187878_10985231	3300018005	Peatland	MRWVLLFFGSLATGVLAIVLSLALLLVSLSIYDRFVLGIASNGAVGWDPVSIFGRYWVIGIPLLIFGLGCSAGF
Ga0187805_103095111	3300018007	Freshwater Sediment	SLAAGVLAIVLSLTLLLVSLSIYDRYVLGITSNGSVGWDPISIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHP
Ga0187866_10596902	3300018015	Peatland	MRWVLLFFGSLATGVLAIVLSLALLLVSLSIYDRYVLGIAADGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0187880_10744572	3300018016	Peatland	MRWVLLFFGSLAAGVLAIVLSLALLLVSLSIYVRYVLGIASNGSVGWDPVSIFGRWVIGIPLLIFGLGCSTGFWFLSKRLHR
Ga0187874_101795162	3300018019	Peatland	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIAADGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGSWFISKRLHR
Ga0187861_100554241	3300018020	Peatland	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIASDGSVGWDPVSIFGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0187882_10612853	3300018021	Peatland	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIASDGAVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0187882_11529791	3300018021	Peatland	MRWVLLFFGSLAAGVLAIVLSLALLLVSLSIYARYVLGIASNGAVGWDPVSIFGRWVIGIPLLIFALGCSTGFWFLSKRLHR
Ga0187885_102039282	3300018025	Peatland	MRWVLLFFGSLATGVLTIVLSLASLLVSLSVYDRYVLGIASDGAVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFLFLSKRLHR
Ga0187857_101976891	3300018026	Peatland	QLSGLECLMRWVLLFFGSLATGVLTIVLSLASLLVSLSVYDRYVLGIASDGAVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0187867_100346363	3300018033	Peatland	MRWVLLFFGSLATGVLTIVLSLAFLLVSLSVYDRYVLGIASDGSVGWDPVSIYGRYWVIGIPLLIFGLGCS
Ga0187890_1000108120	3300018044	Peatland	YNIAISLVDQLSGLECLMRWVLLFFGSLATGVLTIVLSLAFLLVSLSVYDRYVLGIASDGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0187890_108737332	3300018044	Peatland	YNIAISLVDQLSGLECLMRWVLLFFGSLATGVLTIVLSLAFLLVSLSVYDRHVLGIASDGAVGWDPVSIYGLYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0187859_104219621	3300018047	Peatland	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIASDGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSTPLHR
Ga0187858_102692632	3300018057	Peatland	FFGSLATGVLAIVLSLALLLVSLSIYDRVVLGIASNGAVGWDPVSIFGRWVIGIPLLIFGLGCSTGFWFLSKRLHR
Ga0187858_109483162	3300018057	Peatland	MRWVLLFFGSLAAGVLAIVLSLALLLVSLSIYVRYVLGIASNGSVGWDPVSIFGRWVIGIPLLIFGLGCS
Ga0193713_10263352	3300019882	Soil	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYARHVLGIASNGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0193751_10150144	3300019888	Soil	MRWVLLFFGSLATGVLAIVLSLALLLVSLAIYDRYILGITSNGAVGWDPVSIFGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0210403_1000101823	3300020580	Soil	MRWALLFFGSLATGVVAIVLSLALLLVSLAIYDRYILGITSNGSVGWDPVSIFGRWVIGIPLLIFGLGWSAGFWFLSKRLHR
Ga0210401_104227171	3300020583	Soil	WNQLQLVDQLSGLECLMRWVLLFFGSLATGVLAIVLSLALLLVSLAMYDRYILGITSNGAVGWDPVSIFGRWVIGIPLLIFGLGCSSGFRFLSKRLHR
Ga0210406_1001574211	3300021168	Soil	MRWVLLFFGSLATGVLAIVLSLALLLVSLAMYDRYILGITSNGAVGWDPVSIFGRWVIGIPLLIFGLGCSSGFRFS
Ga0210405_103723882	3300021171	Soil	MRWVLLFFGSLAAGVLTIVLSLALLLVSLSIYDRYVVGIASDGSVGWDPVSIYGRHWVIGIPLLIFGLGCSAGFWFLDKRLHR
Ga0210384_1000093116	3300021432	Soil	MRWVLLFFGSLATGVLAIVLSLALLLVSLAMYDRYILGITSNGAVGWDPVSIFGRWVIGIPLLIFGLGCSSGFRFLSKRLHR
Ga0210384_105442771	3300021432	Soil	MRWMLVCLGSLATGVLTIVLSLALVLVSLSVYDRYVLGITSSVGWDPVSLFGGYWKLGVIGIPLLIFGLGCSVGFWFLSKRLHS
Ga0212123_100153441	3300022557	Iron-Sulfur Acid Spring	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRHVLGIASNGSVGWDPVSIYGRYWVISIPLLIFGLGCSAGFWFLSKRLHR
Ga0208034_10205893	3300025442	Peatland	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGITSDGAVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRL
Ga0208039_10113223	3300025454	Peatland	MRWVLLFFGSLAAGVLAIVLSLALLLVSLSIYDRFVLGIASNGAVGWDPVSIFGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0208686_11337011	3300025500	Peatland	ITLVGQLSGLECLMRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIASDGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0207684_104607942	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRWILLLLGSLATGVLTIVLSLALLLVSLSIYDRYVLGIASNGSVGWDPVSIYGKPAVISIPLLIFGFGCSVGFFFLNKRLHR
Ga0257180_10702301	3300026354	Soil	GVLTIVLSLALLLVSLSIYDRYVLGIASDGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0257178_10374932	3300026446	Soil	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRHVLGIASNGSVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFSFLSKRLHR
Ga0257172_10547432	3300026482	Soil	MRWVLLFFGSLATGALAIVLSLALLLVSLVIYDRYILGITSNGAVGWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0257161_10246113	3300026508	Soil	MRWVLLFFGSLATGVLAIVLPLALLLVSLFAYGRYVLGVASNESVGWDPVSIFGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0209219_11577091	3300027565	Forest Soil	MRWVLLFFGSLATGVLAIVLSLALLLASLVIYNRYILGITSNGAVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0208324_10103791	3300027604	Peatlands Soil	MRWVLLFSGSLAAGVLAIVLALALLLVSLSLYVRYVLGIASNGSVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0209117_10546133	3300027645	Forest Soil	MRWVLLFFGSLAAGVLAIVLSLALLLVSLSIYVRYVLGIASNGSVGWDPVSIFGRWVIGIPLLIFGLGCSAGFGFLSKRLHR
Ga0209118_11149212	3300027674	Forest Soil	ITSIMARQPLILSGLECVMRWILVFLGSLATGVLAIVVSLVLLLVSLSIYERYVLGIASNETVGWDPISIYGRYCVIGVPVVIFVLGCGLGFWFLNKRLLR
Ga0209274_107030192	3300027853	Soil	VLAIVLSLTLLLVSLSIYDRYVLGITSGGSVGWDPISIFGRWVIGIPLLIFGLGCSVGFWFLSKRLHR
Ga0209517_100685004	3300027854	Peatlands Soil	TGVLTIVLSLALLLVSLSIYDRYVLGIASDGSVSWDPVSIYGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0209701_100447632	3300027862	Vadose Zone Soil	MRWVLLFFGSLATGVLAIVLSLALLLVSLSIYDRYILGIASNGAVGWDPVSIFGRYWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0209380_101490162	3300027889	Soil	MRWVLLCFGSLATGVLAIVLSLALLLVSLAMYDRYILGITSNGAVGWDPVSIFGRWVIGIPLLIFGLGCSAGFRFLSKRLHR
Ga0209624_100019329	3300027895	Forest Soil	MRWILVCLGSLATGILAIVLSLALLLVSLFIYDRYIPGIASNGSVGWGPVSIFGRWVIGIPLLISGLGCSSGFWFLNKRLHR
Ga0209067_109146541	3300027898	Watersheds	MRWVLLFFGSLAAGVLAIVLSPALLLVSLSVYGRYVLGVASNESVGWDPVSIFGRWVIGIPLLIFGLGCSAGLWFLSKRLHR
Ga0209415_100027271	3300027905	Peatlands Soil	MRWVLLFSGSLAAGVLAIVLALALLLLSLSLYVRYVLGIASNGSVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0209415_102111122	3300027905	Peatlands Soil	MRWVLLFFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIASDGSVGWDPVSIYGRYWVVGIPLLIFGLGCSAGFWFISKRLHR
Ga0209698_103743922	3300027911	Watersheds	MRWVLLFFGSLAAGVLAIVLSLALLLVSRFVYGRDVLGVASNESVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0137415_100947213	3300028536	Vadose Zone Soil	MRWVLLFFGSLATGVLAIVLSLALLLVSLAIYDRYILGITSNGAVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0302179_100050409	3300030058	Palsa	MRWVLLFFGSLAAGVLAIMLSLALLLVLLSIHNRYVPGVASSGTVGWDPISIFGRWVIGIPLLIFGLGCSAGFWFLSKQLHR
Ga0311353_108123722	3300030399	Palsa	MRWVLLFFGSLAAGVLAIMLSLALLLVLLSIHNRYVPGVASSGTVGWDPISIFGRWVIGIPLLIFGLGCSAGFWFVSKRLHR
Ga0302325_109624183	3300031234	Palsa	MRWVLLSFGSLAAGVLAIVLSLVLLLVSLSIYDRYVLGIASNGSVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFVSKRLHR
Ga0307476_108564081	3300031715	Hardwood Forest Soil	MRWILLLFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIASNGSVGWDPVSIYGKPAVISIPLLIFGFGCSVGFFFLNKRLHR
Ga0307477_103934351	3300031753	Hardwood Forest Soil	MRWILLLFGSLATGVLTIVLSLALLLVSLSIYDRYVLGIASNGSVGWDPVSIYGKPAVISIPLLIFSFGCSVGFFFLNKR
Ga0307475_100234233	3300031754	Hardwood Forest Soil	MRWILVCLGSLATGVLTIVLSLALLLVSLFVYGRYVLGVASNESVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFLNKRLHR
Ga0307475_103745471	3300031754	Hardwood Forest Soil	MRWVLLFFGSLATGVLAIVLSLALPLVSLAMYDRYILGITSNGAVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFLSKRLHR
Ga0307475_112962331	3300031754	Hardwood Forest Soil	MRWILLFLGSVVTGVLTIVLSLTLLLVSLYIYGKYVLEIPSNGSVGWDPVLLFGRYWKLGVIGIPLLIFGLGCCVGF
Ga0311301_112349463	3300032160	Peatlands Soil	MRWVLLFFGSLAAGVLAIVLSLALLLVSLSVYARYVLGIASNGAVGWDPVSIFGRWVIGIPLLIFALGCSTGFWFLSKRLHR
Ga0326727_1000047066	3300033405	Peat Soil	MRRVLLFFGSLATGVLTIVLSLALLVVSLSMYDRYVLGIASDGSIGWDPVSIYGRYWVIGIPLLIFGLGCSAGYWFLRKRLHC
Ga0326727_102685252	3300033405	Peat Soil	MRWVLLFFGSLAAGVLAIVLSLALLLVSLSIYNRSVLGTASNGAVGWDPVSIFGRWVIGIPLLIFGLGCSAGFWFLSKRLHR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054232

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences