Metagenome / Metatranscriptome Family F054254

Basic Information
Family ID	F054254
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	51 residues
Representative Sequence	LRGSVARPVLGAVERKVASRSGLLPEWRADAHLRTDPQLAKTSGGEQGAHVS
Number of Associated Samples	118
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	97.14 %
% of genes near scaffold ends (potentially truncated)	89.29 %
% of genes from short scaffolds (< 2000 bps)	100.00 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Most Common Taxonomy
Group	Unclassified (98.571 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (19.286 % of family members)
Environment Ontology (ENVO)	Unclassified (22.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.00% β-sheet: 0.00% Coil/Unstructured: 85.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF13185	GAF_2	1.43

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.57 %
All Organisms	root	All Organisms	1.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.57 %
cellular organisms	root	All Organisms → cellular organisms	1.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.57 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.43 %

Scaffold	Taxonomy	Length	IMG/M Link
3300003544\|Ga0007417J51691_1097589	Not Available	534	Open in IMG/M
3300004099\|Ga0058900_1019250	Not Available	531	Open in IMG/M
3300004102\|Ga0058888_1028566	Not Available	522	Open in IMG/M
3300004102\|Ga0058888_1466273	Not Available	514	Open in IMG/M
3300004135\|Ga0058884_1032307	Not Available	589	Open in IMG/M
3300004136\|Ga0058889_1034352	Not Available	563	Open in IMG/M
3300004138\|Ga0058905_1591139	Not Available	514	Open in IMG/M
3300004139\|Ga0058897_11180801	Not Available	580	Open in IMG/M
3300004596\|Ga0068949_1013481	Not Available	521	Open in IMG/M
3300004785\|Ga0058858_1412712	Not Available	575	Open in IMG/M
3300004800\|Ga0058861_11969636	Not Available	510	Open in IMG/M
3300004800\|Ga0058861_12065542	Not Available	530	Open in IMG/M
3300005614\|Ga0068856_101389543	Not Available	717	Open in IMG/M
3300005840\|Ga0068870_11452721	Not Available	504	Open in IMG/M
3300006173\|Ga0070716_101684577	Not Available	523	Open in IMG/M
3300006954\|Ga0079219_12475001	Not Available	505	Open in IMG/M
3300009093\|Ga0105240_11993511	Not Available	603	Open in IMG/M
3300009580\|Ga0115596_1119080	Not Available	532	Open in IMG/M
3300010061\|Ga0127462_164701	Not Available	528	Open in IMG/M
3300010062\|Ga0127426_130731	Not Available	558	Open in IMG/M
3300010080\|Ga0127448_147630	Not Available	517	Open in IMG/M
3300010082\|Ga0127469_125523	Not Available	509	Open in IMG/M
3300010090\|Ga0127471_1021080	Not Available	527	Open in IMG/M
3300010093\|Ga0127490_1023303	Not Available	513	Open in IMG/M
3300010104\|Ga0127446_1058856	Not Available	564	Open in IMG/M
3300010105\|Ga0127470_1084941	Not Available	508	Open in IMG/M
3300010122\|Ga0127488_1034884	Not Available	502	Open in IMG/M
3300010134\|Ga0127484_1108574	Not Available	515	Open in IMG/M
3300010154\|Ga0127503_10186037	Not Available	528	Open in IMG/M
3300010154\|Ga0127503_10341674	Not Available	512	Open in IMG/M
3300010154\|Ga0127503_11011384	Not Available	505	Open in IMG/M
3300010856\|Ga0126358_1111407	Not Available	528	Open in IMG/M
3300010857\|Ga0126354_1199170	Not Available	512	Open in IMG/M
3300010858\|Ga0126345_1133514	Not Available	503	Open in IMG/M
3300010859\|Ga0126352_1268772	Not Available	502	Open in IMG/M
3300010861\|Ga0126349_1041443	Not Available	513	Open in IMG/M
3300010862\|Ga0126348_1101096	Not Available	513	Open in IMG/M
3300010896\|Ga0138111_1065312	Not Available	533	Open in IMG/M
3300010896\|Ga0138111_1128060	Not Available	526	Open in IMG/M
3300011047\|Ga0138553_166040	Not Available	501	Open in IMG/M
3300011049\|Ga0138554_162549	Not Available	517	Open in IMG/M
3300011078\|Ga0138565_1066907	Not Available	506	Open in IMG/M
3300011120\|Ga0150983_12656846	Not Available	521	Open in IMG/M
3300012373\|Ga0134042_1225088	Not Available	515	Open in IMG/M
3300012380\|Ga0134047_1023335	Not Available	546	Open in IMG/M
3300012385\|Ga0134023_1219865	Not Available	577	Open in IMG/M
3300012387\|Ga0134030_1052681	Not Available	502	Open in IMG/M
3300012388\|Ga0134031_1026316	Not Available	510	Open in IMG/M
3300012388\|Ga0134031_1196356	Not Available	506	Open in IMG/M
3300012401\|Ga0134055_1261497	Not Available	523	Open in IMG/M
3300012403\|Ga0134049_1023979	Not Available	577	Open in IMG/M
3300012407\|Ga0134050_1008713	Not Available	533	Open in IMG/M
3300012407\|Ga0134050_1289391	Not Available	539	Open in IMG/M
3300012469\|Ga0150984_108780612	Not Available	504	Open in IMG/M
3300013043\|Ga0154018_102799	Not Available	502	Open in IMG/M
3300013052\|Ga0154014_134713	Not Available	529	Open in IMG/M
3300017959\|Ga0187779_11193019	Not Available	535	Open in IMG/M
3300017966\|Ga0187776_10491286	Not Available	838	Open in IMG/M
3300018089\|Ga0187774_11064068	Not Available	570	Open in IMG/M
3300019212\|Ga0180106_1031243	Not Available	502	Open in IMG/M
3300019212\|Ga0180106_1069789	Not Available	521	Open in IMG/M
3300019233\|Ga0184645_1312598	Not Available	527	Open in IMG/M
3300019245\|Ga0187791_1154398	Not Available	509	Open in IMG/M
3300019248\|Ga0180117_1235575	Not Available	573	Open in IMG/M
3300019249\|Ga0184648_1099852	Not Available	509	Open in IMG/M
3300019249\|Ga0184648_1430811	Not Available	511	Open in IMG/M
3300019249\|Ga0184648_1456751	Not Available	514	Open in IMG/M
3300019265\|Ga0187792_1561408	Not Available	512	Open in IMG/M
3300019269\|Ga0184644_1015508	Not Available	528	Open in IMG/M
3300019279\|Ga0184642_1528528	Not Available	515	Open in IMG/M
3300019279\|Ga0184642_1652076	Not Available	506	Open in IMG/M
3300020068\|Ga0184649_1063627	Not Available	545	Open in IMG/M
3300020069\|Ga0197907_11485951	Not Available	564	Open in IMG/M
3300020075\|Ga0206349_1148054	Not Available	519	Open in IMG/M
3300020078\|Ga0206352_10545096	Not Available	550	Open in IMG/M
3300020081\|Ga0206354_11143580	Not Available	500	Open in IMG/M
3300020081\|Ga0206354_11519840	Not Available	500	Open in IMG/M
3300020081\|Ga0206354_11587912	Not Available	576	Open in IMG/M
3300020610\|Ga0154015_1223466	Not Available	539	Open in IMG/M
3300021151\|Ga0179584_1192843	Not Available	528	Open in IMG/M
3300021858\|Ga0213852_1453381	Not Available	519	Open in IMG/M
3300021861\|Ga0213853_10854276	Not Available	527	Open in IMG/M
3300022195\|Ga0222625_1279485	Not Available	571	Open in IMG/M
3300022499\|Ga0242641_1042316	Not Available	532	Open in IMG/M
3300022503\|Ga0242650_1021450	Not Available	543	Open in IMG/M
3300022507\|Ga0222729_1070992	Not Available	514	Open in IMG/M
3300022507\|Ga0222729_1074922	Not Available	505	Open in IMG/M
3300022508\|Ga0222728_1126336	Not Available	505	Open in IMG/M
3300022509\|Ga0242649_1056069	Not Available	565	Open in IMG/M
3300022513\|Ga0242667_1054801	Not Available	515	Open in IMG/M
3300022513\|Ga0242667_1057514	Not Available	508	Open in IMG/M
3300022522\|Ga0242659_1121614	Not Available	534	Open in IMG/M
3300022525\|Ga0242656_1092751	Not Available	582	Open in IMG/M
3300022525\|Ga0242656_1129180	Not Available	518	Open in IMG/M
3300022527\|Ga0242664_1142438	Not Available	524	Open in IMG/M
3300022528\|Ga0242669_1131722	Not Available	510	Open in IMG/M
3300022528\|Ga0242669_1139452	Not Available	500	Open in IMG/M
3300022532\|Ga0242655_10317255	Not Available	512	Open in IMG/M
3300022708\|Ga0242670_1050925	Not Available	589	Open in IMG/M
3300022709\|Ga0222756_1085134	Not Available	522	Open in IMG/M
3300022711\|Ga0242674_1065611	Not Available	524	Open in IMG/M
3300022720\|Ga0242672_1124717	Not Available	530	Open in IMG/M
3300025935\|Ga0207709_10463779	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300026041\|Ga0207639_10148103	All Organisms → cellular organisms → Bacteria	1963	Open in IMG/M
3300026384\|Ga0213907_126588	Not Available	537	Open in IMG/M
3300026392\|Ga0213908_140448	Not Available	500	Open in IMG/M
3300030844\|Ga0075377_10050554	Not Available	524	Open in IMG/M
3300030845\|Ga0075397_10054485	Not Available	504	Open in IMG/M
3300030884\|Ga0265758_110018	Not Available	502	Open in IMG/M
3300030902\|Ga0308202_1162560	Not Available	504	Open in IMG/M
3300030904\|Ga0308198_1084599	Not Available	538	Open in IMG/M
3300030917\|Ga0075382_10009312	Not Available	550	Open in IMG/M
3300030966\|Ga0075383_11385292	Not Available	516	Open in IMG/M
3300030969\|Ga0075394_12098364	Not Available	505	Open in IMG/M
3300030974\|Ga0075371_11869037	Not Available	532	Open in IMG/M
3300030975\|Ga0099845_1030229	Not Available	509	Open in IMG/M
3300030975\|Ga0099845_1581525	Not Available	557	Open in IMG/M
3300030986\|Ga0308154_117790	Not Available	514	Open in IMG/M
3300030988\|Ga0308183_1201538	Not Available	518	Open in IMG/M
3300030988\|Ga0308183_1212652	Not Available	508	Open in IMG/M
3300031022\|Ga0138301_1642364	Not Available	532	Open in IMG/M
3300031023\|Ga0073998_11652500	Not Available	532	Open in IMG/M
3300031024\|Ga0265724_105239	Not Available	511	Open in IMG/M
3300031057\|Ga0170834_104904764	Not Available	520	Open in IMG/M
3300031114\|Ga0308187_10452253	Not Available	518	Open in IMG/M
3300031231\|Ga0170824_100458742	Not Available	554	Open in IMG/M
3300031231\|Ga0170824_122385260	Not Available	543	Open in IMG/M
3300031421\|Ga0308194_10359128	Not Available	521	Open in IMG/M
3300031422\|Ga0308186_1037744	Not Available	519	Open in IMG/M
3300031423\|Ga0308177_1032763	Not Available	507	Open in IMG/M
3300031423\|Ga0308177_1032839	Not Available	507	Open in IMG/M
3300031469\|Ga0170819_10221655	Not Available	503	Open in IMG/M
3300031469\|Ga0170819_17606191	Not Available	539	Open in IMG/M
3300031663\|Ga0307484_116273	Not Available	539	Open in IMG/M
3300034643\|Ga0370545_160523	Not Available	522	Open in IMG/M
3300034663\|Ga0314784_146720	Not Available	531	Open in IMG/M
3300034667\|Ga0314792_231442	Not Available	532	Open in IMG/M
3300034670\|Ga0314795_127611	Not Available	534	Open in IMG/M
3300034673\|Ga0314798_169695	Not Available	509	Open in IMG/M
3300034678\|Ga0314803_135452	Not Available	512	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.86%
Host-Associated	Host-Associated	7.14%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.00%
Aquatic	Environmental → Aquatic	12.86%
Plants	Host-Associated → Plants	5.00%
Human	Host-Associated → Human	2.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.00%
Freshwater	Environmental → Aquatic → Freshwater	12.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.86%
Digestive System	Host-Associated → Human → Digestive System	2.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.14%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.00%
Sediment	Environmental → Aquatic → Freshwater → Sediment	10.71%
Loam	Environmental → Terrestrial → Soil → Loam	6.43%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.57%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.14%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	2.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.14%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.57%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	10.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.71%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.57%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.14%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	2.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.43%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.29%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	15.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.29%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	8.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	6.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.71%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	5.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.57%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.86%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.14%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.14%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	2.14%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.43%
Enriched Soil Aggregate	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Enriched Soil Aggregate	1.43%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.43%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.43%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.71%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.71%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003544	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_33 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004099	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF236 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004102	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF212 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004135	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004136	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF214 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004138	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF246 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004596	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 37 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004785	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009580	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_11_14_C (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010061	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010062	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010080	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010082	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010090	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010093	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010104	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010105	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010122	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010134	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010856	Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010857	Boreal forest soil eukaryotic communities from Alaska, USA - W1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010858	Boreal forest soil eukaryotic communities from Alaska, USA - C3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010859	Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010861	Boreal forest soil eukaryotic communities from Alaska, USA - C4-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010896	Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011047	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 34 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011049	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 35 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011078	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 50 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012380	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012385	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012387	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012388	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012407	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300013043	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300013052	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300019212	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT25_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019245	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019248	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_2_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019265	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020068	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021858	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022503	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022507	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022513	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022720	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026384	Metatranscriptome of enriched soil aggregate microbial communities from Iowa State University, Ames, United States - MC6-MC0896-MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026392	Metatranscriptome of enriched soil aggregate microbial communities from Iowa State University, Ames, United States - MC6-MC0906-MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030844	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030845	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA7 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030884	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030917	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030966	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB4 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030974	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030975	Forest soil eukaryotic communities from Alaska, USA, for a soil warming experiment in a boreal forest - Alaskan Soil AK pilot (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030986	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_143 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031022	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300031023	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil TCEFA (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031024	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031422	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_181 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031423	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_148 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031663	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034663	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034670	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034673	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034678	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0007417J51691_10975892	3300003544	Avena Fatua Rhizosphere	LTQFRGSVARPVIGAVERKAASRSELLPGRAANAHLRTDPQPVKAGSGEQGAHVSPVPDA
Ga0058900_10192501	3300004099	Forest Soil	VRPVLGAVERKVASRSGLLPKWRADAHLRTDPRLAKTSSGEQGAH
Ga0058888_10285661	3300004102	Forest Soil	LTRLRGSVARPVLGAVERKVASRSGLLPEWRADAHLRTDPQLAKTSGGEQGAHVS
Ga0058888_14662731	3300004102	Forest Soil	LTQLRGSVVRPVLGAVERKVASRNGLLLEWRADAHLRSDPRLAKTSSGEQRAHVSPIPDATF*
Ga0058884_10323071	3300004135	Forest Soil	LTRLRGSVVRPVLGAVERKVASRNGLLPEWEADAHLRTDPQLAKTSGGEQGAQVSPVPDATF*
Ga0058889_10343521	3300004136	Forest Soil	LTQLRGSVVRPVLGAVERKVASRSGLLPAWRADTHLRTDPQLGKTSSGEQRAHVSPIPDATF*
Ga0058905_15911391	3300004138	Forest Soil	LTQLRGSVVRPVLGAVERKVASRIGLLLEWRADAHLRSDPRLAKTSSGEQRAHVSPIPDATF*
Ga0058897_111808011	3300004139	Forest Soil	LTQLRGSVVRPVLGAVERKAVSRSGLLPDWRADAHLRTDPRLAKTSSGEQRAHVSPSPDATF*
Ga0068949_10134811	3300004596	Peatlands Soil	VRPVLGAVERKVASRNGLLPGWRADAHLRTDPQLAKTSGGEQGAHVS
Ga0058858_14127121	3300004785	Host-Associated	LTQLWGSVVRPVLGAVERKAASRSGLLLEREADAHQRTDPQLAKASGGEQRAHVSPVPDATF*
Ga0058861_119696361	3300004800	Host-Associated	VRPVLEAVERKAASRSGLLPEMEADAHLRTDPQLAKTSGGEQG
Ga0058861_120655422	3300004800	Host-Associated	LTQLRGSVVRPVVAAVERKVASRNGLLPERTADAHLRTDPQLAKTSGGEQRAHVSPV
Ga0068856_1013895431	3300005614	Corn Rhizosphere	LTQLRESVARPVLETVERKAASRSGLLPVMEADAHLRTDPQ
Ga0068870_114527211	3300005840	Miscanthus Rhizosphere	LRGSVARPVLGVVERKAASRSGLLPVMEADAHLRTDPQLAK
Ga0070716_1016845772	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	AVERKVASRSGLLPEWRADTHLRTDPQLGKTSGGEQRAHVSPIPDATF*
Ga0079219_124750011	3300006954	Agricultural Soil	LTQFRGSVARSVLGAVERKAASRSGLLPEWTADAHLRIDPQLANASGGEQRAHVSPIPGATF*
Ga0105240_119935112	3300009093	Corn Rhizosphere	LRGSVARPVLGVVERKAASRSGLLPVMEADAHLRTDPQLAKTSGGEQRAHVSP
Ga0115596_11190802	3300009580	Wetland	LRGSVVRPVLGAVERKVASRSGLLPEWRADAHLRSDPRLAKAISGKQRAHVSPVP
Ga0127462_1647011	3300010061	Grasslands Soil	VRPVLGAVERKVASRSGLLSEWKADAHLRTDPRLGKTSSGEQGAHVSPIP
Ga0127426_1307311	3300010062	Grasslands Soil	LRGSVVRPVLGAVERKVASRSGLLSEWRADAHLRSDPRLAKTFSGKQRAHVSPVPDATFGPCMPVG
Ga0127448_1476301	3300010080	Grasslands Soil	LRGSVARPVLEIVERKAASRSGLLPVMEADAHLRTDPQLAKTNGGEQRAHVSP
Ga0127469_1255231	3300010082	Grasslands Soil	LRGSVARPILGVVERKAASRSGLLPVMEADAHLRTDPQLAKTSGGEQRA
Ga0127471_10210801	3300010090	Grasslands Soil	VRPVLGAVERKVASRSGLLPEWKADTHLRTDPRLAQNQQRGARGLGLANP
Ga0127490_10233031	3300010093	Grasslands Soil	LRGSVARPTLGVVERKAASRSGLLLEKVADAHLRTDPQLAKTSGGEQRAHVS
Ga0127446_10588561	3300010104	Grasslands Soil	LRGSVARPVLGAVERKVASRSGLLSEWRADAHLRSDPRLAKTFSGKQRAHVSPVPDATFGPCMPVGEQ
Ga0127470_10849411	3300010105	Grasslands Soil	LRGSVARPILGVVERKAASRSGLLPVMEADAHLRTDPQLAKTSGGEQR
Ga0127488_10348841	3300010122	Grasslands Soil	VRPVLGAVERKVASRSGLLSECKADAHLRTDPRLGKTSSG
Ga0127484_11085741	3300010134	Grasslands Soil	LRGSVARPVLGAVERKVASRSGLLSEWRADAHLRSDPQLAKASSGKQRAHVS
Ga0127503_101860371	3300010154	Soil	LTQFRGSVVRPVIGAVERKAASRNELLPGRAANAHLRTDPQLAKASGGEQRAQVSP
Ga0127503_103416741	3300010154	Soil	LTQFRGSVARPVIGAAERKAASRSGFLPEMAANAHLRTDPSLVKTSGGERR
Ga0127503_110113841	3300010154	Soil	LRGSVARPVLGAVERKVASRSGLLPEWRADAHLRTDPQLAKTSGGEQGAHVSP
Ga0126358_11114071	3300010856	Boreal Forest Soil	LRGSVARPVLAVVERKAASRSGLLPEMEADAHLRTDPQLAKTSGGEQRAHVS
Ga0126354_11991701	3300010857	Boreal Forest Soil	VRPILGAVERKAASRNGLLPEWIANAHLRTDPKLAKTSGGEQ
Ga0126345_11335141	3300010858	Boreal Forest Soil	VRPDIGAVERKVASRSGLLPEWRADAHLRTDPRLAENQQRG
Ga0126352_12687721	3300010859	Boreal Forest Soil	VRPVLGAVERKVASRSGLLPEWRADAHLRTDPQLAKTSGGE
Ga0126349_10414431	3300010861	Boreal Forest Soil	LRGSVARPVLAVVERKAASRSGLLPEMEADAHLRTDPQLAKTSGGEQR
Ga0126348_11010961	3300010862	Boreal Forest Soil	VRPDLGAVERKVASRSGLLPEWRADAHLRTDPQLAKTSSGE
Ga0138111_10653121	3300010896	Grasslands Soil	LRGSVARPVLGVVERKAASRSGLLPVMEADAHLRTDPQLAKTSSGEQRAHVSPD
Ga0138111_11280601	3300010896	Grasslands Soil	VRPVLGTAERKVASRNGLLPKWAADAHLRTDPRLAKTSSGEQRAHVSPIRM
Ga0138553_1660402	3300011047	Peatlands Soil	LRGSVVRPVLGAVERKVASRNGLLPGWIADAHLRTDPWLAKTSGG
Ga0138554_1625491	3300011049	Peatlands Soil	VRPVLGAVERKVASRNGLLPGWRADAHLRTDPQLAKTSGGEQGAHV
Ga0138565_10669071	3300011078	Peatlands Soil	VRPVLGAVERKVASRNGLLPGWRADAHLRTDPQLAKTSGGEQG
Ga0150983_126568461	3300011120	Forest Soil	VRPVLGAVERKVASRSGLLLEWRADTHLRTDPQLAKTSGGEQGAH
Ga0134042_12250881	3300012373	Grasslands Soil	LRGSVARPVLGAVERKVASRSGLLSEWRADAHLRTDPQLVNASSGEQRAHVS
Ga0134047_10233351	3300012380	Grasslands Soil	LRGSVARPILGVVERKAASRSGLLPVMEADAHLRTDPQLAKTSSGEQRAHVSPDPDA
Ga0134023_12198651	3300012385	Grasslands Soil	MPVLGAVERKVASRSGLLSEWRADAHLRSDPRLAKTFSGKQRAHVSPVPDATFGPCMPVGEQAT
Ga0134030_10526811	3300012387	Grasslands Soil	LRGSVARPILGVVERKAASRSGLLPVMEADAHLRTDPQLAKTS
Ga0134031_10263161	3300012388	Grasslands Soil	VRPVLGAVERKVASRSGLLSEWKADAHLRTDPRLGKTSSGEQ
Ga0134031_11963561	3300012388	Grasslands Soil	LVARSVVGAVERKAASRSGLLPEWRADAHLRTDPLLAKTSGGEQR
Ga0134055_12614971	3300012401	Grasslands Soil	LRGSVARPILGVVERKAVSRSGLLPVMEADAHLRTDPQLAKTSGGEQRAHVS
Ga0134049_10239791	3300012403	Grasslands Soil	LRGSVARPVLGAVERKVASRSGLLSEWRADAHLRSDPRLAKTFSGKQRAHVSPVPDATFGPCMPVGEQAT
Ga0134050_10087131	3300012407	Grasslands Soil	LRGSVARPILGVVERKAASRSGLLPVMEADAHLRTDPQLAKTSSGEQRAHVSP
Ga0134050_12893911	3300012407	Grasslands Soil	VRPVLGTAERKVASRNGLLPKWAADAHLRTDPRLAKTSRGEQRAHVSPVSDA
Ga0150984_1087806121	3300012469	Avena Fatua Rhizosphere	LRGSVARPVLGVVERKAASRSGLLPVMEADAHLRTDPQLGKTSGGEQRAH
Ga0154018_1027991	3300013043	Corn, Switchgrass And Miscanthus Rhizosphere	VRPVLGAVERKVASRSGLLPEWRADAHLRTDPRLAKTSSGEQG
Ga0154014_1347131	3300013052	Corn, Switchgrass And Miscanthus Rhizosphere	VRPVLGAVERKVASRSGLLPEWRADAHLRTDPRLAKTSSGEQGAHVSPI
Ga0187779_111930191	3300017959	Tropical Peatland	LTQLRGSVARPVLGAVERKVISRNGLLPGWIADTHLRTDPQLAKTSGGEQRAHVTPFPDA
Ga0187776_104912861	3300017966	Tropical Peatland	LRGSVARPVLGAVERKVASRNRLLPERKADAHLRFDPRLAKASSGEQRAHVPPV
Ga0187774_110640681	3300018089	Tropical Peatland	LRGSVARPVLGAVERKVASRNRLLPERKADAHLRFDPRLAKASSGEQRAHVPPVPDATF
Ga0180106_10312431	3300019212	Groundwater Sediment	VRPVLEAVERKAASRSGLLPEMEADAHLRTDPQLAKTSGGEQGAHV
Ga0180106_10697891	3300019212	Groundwater Sediment	LRGSVARPVLGAVERKVASRSGLLPEWRADAHLRSDPQLAKAISGKQRAHVSPV
Ga0184645_13125981	3300019233	Groundwater Sediment	LTQSWGSVARPVLGAVERKAASRSGLLPELRADAHLRTDPQLAKTSGGEQRAHVSPVLDA
Ga0187791_11543981	3300019245	Peatland	VRPVLGSAERKAASRDGLLPEWRADAHLRTDPRLAKTGSGEQR
Ga0180117_12355751	3300019248	Groundwater Sediment	LRGSVARPVLGVVERKAASRSGLLPVMEADAHLRTDPQLAKTSGGEQRAYVSPVPDATF
Ga0184648_10998521	3300019249	Groundwater Sediment	VRPVLEAAERKAASRSKLLPELAADAHLRTDPQLAKTSGGEQRA
Ga0184648_14308111	3300019249	Groundwater Sediment	VRPILEAAERKAASRSKLLPELAADAHLRTDPQLAKTSGGEQRA
Ga0184648_14567511	3300019249	Groundwater Sediment	LRGSVARPVLGIVERKAASRSGLLPVMAADAHLRTDPQLAKTSGGEQRAH
Ga0187792_15614081	3300019265	Peatland	VRPVLGAVERKVASRSGLLPGWRADAHLRTDPLLAKTSGGEQGAH
Ga0184644_10155081	3300019269	Groundwater Sediment	VRPVLGAAERKAVSRSGLLPEWRADAHLRTDPQLAKTSGGEQRAHVSPDP
Ga0184642_15285281	3300019279	Groundwater Sediment	LTQFRGSVARPVIGAVERKAASRNELLPGRVANAHLRTDPRLANTSGGEQGAHVS
Ga0184642_16520761	3300019279	Groundwater Sediment	LRGSAVKPVLGAVERKVASRNGLLPEWTADAHLRTDPRLAKTISGEQ
Ga0184649_10636271	3300020068	Groundwater Sediment	LRGSVARPVLGVVERKAASRSGLLPEMEADAHLRTDPQLAKTSGGEQRAHVSPRPDAT
Ga0197907_114859511	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	VRPVLGAVERKAASRSGLLPEWRADAHLRSDPQLAKAISGKQRAYVSPVSDAMFGPCMPV
Ga0206349_11480542	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	LRGSVARPVLGAVERKVVSRSGLLPEWRADAHLRTDPRLAKTSSGEQGAHVS
Ga0206352_105450961	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	VRPVLGAVERKAASRSGLLPEWRADAHLRSDPQLAKAISGKQRAYVSPVSDAMFGP
Ga0206354_111435801	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	LRGSVVRPVLGIVERKAASRSGLLPVMEADAHLRTDPQLAKTSGGE
Ga0206354_115198401	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	VRPVLGAVERKAASRSGLLPEWRADAHLRSDPQLAKAI
Ga0206354_115879121	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	LWGSVVRPVLGAVERKAASRSGLLPEREADAHLSTDPQLDKTGGGEQRAHVSPVPDATF
Ga0154015_12234661	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	VRPVLGAVERKVASRSGLLPEWRADAHLRTDPRLAKTSSGEQGAHVSPIRMP
Ga0179584_11928431	3300021151	Vadose Zone Soil	VRPVLGVVERKAASRNGLLPEMDADAHLRTDPQLAKTSGGEQRAHVSPDPDATF
Ga0213852_14533811	3300021858	Watersheds	VRPVLGAVERKVASKDGLLPGWRADAHLRTDPQVAKTSGGEQG
Ga0213853_108542761	3300021861	Watersheds	VRSVLGAVERKAASRSGLLPGWIADAHLRTDPQLANTSGGEQGAHVSP
Ga0222625_12794851	3300022195	Groundwater Sediment	VRPVLGAVERKVASRSGLLPEWRADAHLRSDPRLAKAISGKQRAHVSPVPDATFGPCMPVGEQAA
Ga0242641_10423161	3300022499	Soil	VRPVLGAVERKVASRSGLLPEWRADAHLRSDPQLAKTSSGEQGAHVSPI
Ga0242650_10214501	3300022503	Soil	VRPVVGAVERKVASRSGLLPEWRADTHLRTDPQLAKTSGGEQRAHVSPVPDATF
Ga0222729_10709921	3300022507	Soil	VRPDLGAVERKVASRSGLLPEWRADTHLRTDPPLVKTSGGEQRA
Ga0222729_10749221	3300022507	Soil	VRAVLGVVERKVASRSGLLPGWTADAHLRTDPQLAKASGGEQRAHVS
Ga0222728_11263361	3300022508	Soil	VRPVLGAVERKVASRSGLLPKWRADAHLRTDPRLAKTSSGEQ
Ga0242649_10560691	3300022509	Soil	VRPVLGAVERKVASRSGLLPKWRADAHLRTDPRLAKTSSGE
Ga0242667_10548011	3300022513	Soil	LRGSVARPVLGAVERKVASRSGLLPEWRADAHLRTDPRLAKTSGGEQGAHVS
Ga0242667_10575141	3300022513	Soil	VRPVLGAVERKVASRSGLLPEWRADAHLRTDPRLAKTSGGEQGAH
Ga0242659_11216141	3300022522	Soil	LSAVERKVASRSGLLPGWKADAHPSIDPQLAKASGGERRAHVSLIPDATF
Ga0242656_10927511	3300022525	Soil	VRPVLGAVERKAASRSELLPEWRADVHLRTDPQLAKTSSGEQRANVSPVPDATF
Ga0242656_11291801	3300022525	Soil	VRPVLGAVERKVASKSGLLLEWGADAHLRTDPQLAKTSSGEQGA
Ga0242664_11424382	3300022527	Soil	VRPVLGVVERKVASRSGLLPGWTADAHLRTDPQLAKASGGEQRAHVS
Ga0242669_11317221	3300022528	Soil	VRPDLGAVERKVASRSGLLPEWRADAHLRTDPQLAKTSSGEQGA
Ga0242669_11394521	3300022528	Soil	LRGSVVRPVLGAVERKVASRSALLPGWRADTHLRTDPQLAKTSGGEQR
Ga0242655_103172551	3300022532	Soil	LRGSVARPVLGAVERKVASRSRLLLECTADAHLRTDPQLAKTSGGEQRAQVSVHPD
Ga0242670_10509251	3300022708	Soil	LRGSVARPILGVVERKAASRNGLLPEMDADAHLRTDPQLAKTSGGEQRAHVSPVPDATF
Ga0222756_10851341	3300022709	Soil	VRPVVGAVERKVASRSGLLPEWRADTHLRTDPQLAKTSGGEQRAHV
Ga0242674_10656111	3300022711	Soil	LRGSVARPVLGAVERKVASRSGLLPEWRADAHLRTDPQLAKTSGGEQGAHVS
Ga0242672_11247172	3300022720	Soil	LTQLRGSVVRPVLGAVERKAASRSGLLPEWRADAHLRTDPQLAKTSSGEQRAHVSPIRMP
Ga0207709_104637792	3300025935	Miscanthus Rhizosphere	LRGSVARPVLGVVERKAASRSGLLPVMEADAHLRTDPQLAKTSSGEQR
Ga0207639_101481034	3300026041	Corn Rhizosphere	LRGSVARPVLGVVERKAASRSGLLPVMEADAHLRTDPQLAKTSGGEQRAHVSS
Ga0213907_1265881	3300026384	Enriched Soil Aggregate	LRGSVARPVLGVVERKAASRSGLLPVMEADAHLRTDPQLAKTSGGEQRAHVSPDPDATF
Ga0213908_1404482	3300026392	Enriched Soil Aggregate	LTQLRGSVARPVLGAVERKAASRNELLPEWRADAHLRTDPRLAKTSSGEQ
Ga0075377_100505541	3300030844	Soil	LRGSVARPILEAVERKAASRSGLLPVMEADAHLRTDPQLAKTSSGEQRAH
Ga0075397_100544851	3300030845	Soil	VRPVLGAVERKVASRSGLLPEWRADAHLRTDPRLAKTSSGEQ
Ga0265758_1100181	3300030884	Soil	VRPVLGAVERKVASRSGLLPEWRADAHLRTDPRLAKTSGGE
Ga0308202_11625601	3300030902	Soil	VRPVLGAVERKAASRSGLLPEMEADAHLSTDPQLVKTSGGE
Ga0308198_10845991	3300030904	Soil	VRPVLGVVERKAASRDGLLPEMDADAHLRTDPQLAKTSGGEQRAHVSPDPDATF
Ga0075382_100093121	3300030917	Soil	LRGSVVRPVLGVVERKAASRSGLLLVMEADAHLRTDPQLAKTSGGEQRAHVSPDPDATF
Ga0075383_113852921	3300030966	Soil	LRGSVARPVLGIVERKAASRSGLLPVMEADAHLRTDPQLAKTSGGEQRAHVSPD
Ga0075394_120983641	3300030969	Soil	LRGSVVRPVLEAVERKAASRSGLLPEMEANAHLRTDPQLAKTSSGEQRAHVSPD
Ga0075371_118690371	3300030974	Soil	LRGSVARPVLGVVERKAASRSGLLPEMDADAHLRTDPQLAKTSGGEQRAHVSPVPDATF
Ga0099845_10302291	3300030975	Boreal Forest Soil	LVARSVVGAVERKAASRSGLLPEWRADAHLRTDPLLAKASGGEQRAHV
Ga0099845_15815251	3300030975	Boreal Forest Soil	VRPVLESVERKAASRSGLLSEMEANAHLRTDPQLDKTGGGEQRAHVSPHPDATFRPRMPV
Ga0308154_1177901	3300030986	Soil	LRGSVARPILGVVERKAASRSGLLPEKEADAHLRTDPQLAKTSGGEQRAHVSPNPD
Ga0308183_12015381	3300030988	Soil	LRGSVARPVLGVVERKAASRSGLLPVMEADAHLRTDPQLAKTSGGEQRAH
Ga0308183_12126521	3300030988	Soil	LRGSVVRPILGVVERKAASRSGLLPVMEADAHLRTDPQLAKTSGGEQRAH
Ga0138301_16423641	3300031022	Soil	LTQLRGSVVRPVLGAVERKVASRSGLLPEWKADAHPRTDPRLAKTSSGEQRAHVSPIR
Ga0073998_116525001	3300031023	Soil	LTQFWGSVARPVLGVVERKAASRNGFLPEMDADAHLRTDPQLAKTSGGEQRAHVSPDPDATFR
Ga0265724_1052391	3300031024	Soil	VRPVLGAVERKVASRSGLLPEWIADAHLRTDPQLAKTTGGEQ
Ga0170834_1049047641	3300031057	Forest Soil	VRPDLGAVERKVASRSGLLPEWRADAHLRTDPQLAKTSSGEQGAHVSP
Ga0308187_104522531	3300031114	Soil	LTQFRGSVARPVLGVVERKAASRSGLLPVMEADAHLRTDPQLAKTSGGEQRAHVS
Ga0170824_1004587421	3300031231	Forest Soil	VRPVLGAVERKAASRSGLLPEWRADAHLRSDPQLANAFGGKQRAHVSPVPDATFGPCMPV
Ga0170824_1223852601	3300031231	Forest Soil	LRGSVVRPVLGAVERKAASRSELLPEWRADVHLRTDPQLAKTSGGEQRANVSPVPDATF
Ga0308194_103591281	3300031421	Soil	VRPVLGAVERKVASRSGLLPEWRADAHLRTDPQLAKTSSGEQRAHVLP
Ga0308186_10377441	3300031422	Soil	LTQFRGSVARPVIGAVERKAASRNELLPGRVANAHLRTDPRLANTSGGEQGAHVSALP
Ga0308177_10327631	3300031423	Soil	LRGSVARPILGVVERKAASRSGLLPVMEADAHLRTDPQLAKTSSGEQRA
Ga0308177_10328391	3300031423	Soil	LRGSVARPVLGVVERKAASRSGLLPVMEADAHLRTDPQLAKTSSGEQRA
Ga0170819_102216551	3300031469	Forest Soil	LTQLRGSVVRPVLGAVERKVASRNGLLPERTADAHLRTDPQLAI
Ga0170819_176061911	3300031469	Forest Soil	VRPILGVVERKAASRSGLLLEMDADAHLRTDPQLAKTSGGEQRAHVSPDPDATF
Ga0307484_1162731	3300031663	Hardwood Forest Soil	LTQLRGSVVRPVLGAVERKVASRSGLLPEWRADAHLRTDPQLAKTSGGEQRAHVSPIPDA
Ga0370545_160523_3_152	3300034643	Soil	MRGSVARPVLGVVERKAASRSGLLPEMEADAHLRTDPQLVKTSGGEQRAH
Ga0314784_146720_373_531	3300034663	Soil	MWGSVVRPVLGAVERKAASRSGLLLEREADAHQRTDPQLAKASGGEQRAHVSP
Ga0314792_231442_361_531	3300034667	Soil	MRGSVARPIIGAAERKAASRSELLPGWAANAHLRTDSRLVKASGGEQGANVSPVPDA
Ga0314795_127611_364_534	3300034670	Soil	MRGSVARPVLGVVERKAASRSGLLPVMEADAHLRTDPQLAKTSSGEQRAHVSPDPDA
Ga0314798_169695_368_508	3300034673	Soil	MRGSVARPVLGVVERKAASRSGLLPVMEADAHLRTDPQLAKTSSGEQ
Ga0314803_135452_371_511	3300034678	Soil	MRGSVARPVLGVVERKAASRSGLLPVMEADAHLRTDPQLAKTSGGEQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054254

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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