Metagenome / Metatranscriptome Family F054281

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F054281
Family Type	Metagenome / Metatranscriptome
Number of Sequences	140
Average Sequence Length	53 residues
Representative Sequence	MLEQSTSNRVLNRMGARELSPEEVQHVAGGTTGCQGTSLHKNGPIVDVLCDPS
Number of Associated Samples	111
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.43 %
% of genes near scaffold ends (potentially truncated)	15.71 %
% of genes from short scaffolds (< 2000 bps)	77.14 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (61.429 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (15.714 % of family members)
Environment Ontology (ENVO)	Unclassified (21.429 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.429 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.88% β-sheet: 16.05% Coil/Unstructured: 74.07%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF11453	DUF2950	2.14
PF00106	adh_short	1.43
PF00704	Glyco_hydro_18	1.43
PF02652	Lactate_perm	1.43
PF04389	Peptidase_M28	1.43
PF01965	DJ-1_PfpI	1.43
PF00587	tRNA-synt_2b	1.43
PF13561	adh_short_C2	0.71
PF01596	Methyltransf_3	0.71
PF00155	Aminotran_1_2	0.71
PF00696	AA_kinase	0.71
PF00578	AhpC-TSA	0.71
PF13435	Cytochrome_C554	0.71
PF13620	CarboxypepD_reg	0.71
PF03544	TonB_C	0.71
PF01453	B_lectin	0.71
PF11737	DUF3300	0.71
PF00975	Thioesterase	0.71
PF07238	PilZ	0.71
PF05199	GMC_oxred_C	0.71
PF01695	IstB_IS21	0.71
PF02784	Orn_Arg_deC_N	0.71
PF13560	HTH_31	0.71
PF00593	TonB_dep_Rec	0.71
PF02321	OEP	0.71
PF07676	PD40	0.71
PF00348	polyprenyl_synt	0.71
PF07719	TPR_2	0.71
PF13424	TPR_12	0.71
PF00753	Lactamase_B	0.71
PF02518	HATPase_c	0.71
PF08240	ADH_N	0.71
PF01663	Phosphodiest	0.71
PF00702	Hydrolase	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.43
COG1620	L-lactate permease	Energy production and conversion [C]	1.43
COG0019	Diaminopimelate decarboxylase	Amino acid transport and metabolism [E]	0.71
COG0142	Geranylgeranyl pyrophosphate synthase	Coenzyme transport and metabolism [H]	0.71
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.71
COG1166	Arginine decarboxylase (spermidine biosynthesis)	Amino acid transport and metabolism [E]	0.71
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.71
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.71
COG2518	Protein-L-isoaspartate O-methyltransferase	Posttranslational modification, protein turnover, chaperones [O]	0.71
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.71
COG4123	tRNA1(Val) A37 N6-methylase TrmN6	Translation, ribosomal structure and biogenesis [J]	0.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.43 %
Unclassified	root	N/A	38.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.43 %
Unclassified	root	N/A	38.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.43 %
Unclassified	root	N/A	38.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.57 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	35.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.29 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.57 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	26.43 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.86 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.14 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.71 %
Acidithiobacillia	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.57 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	24.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.86 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.14 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.43 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.71 %
Acidithiobacillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.57 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	24.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.86 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.14 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.43 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.71 %
Acidithiobacillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.57 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	24.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.86 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.14 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.43 %
Acidithiobacillus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus	0.71 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.57 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	24.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.86 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.14 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	0.71 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.71 %
Acidithiobacillus ferrivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → Acidithiobacillus ferrivorans	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.57 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	24.29 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.86 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.14 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.71 %
Bradyrhizobium sp. DOA9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. DOA9	0.71 %
Acidithiobacillus ferrivorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → Acidithiobacillus ferrivorans	0.71 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459003\|FZ032L002GQVW5	Not Available	518	Open in IMG/M
3300000156\|NODE_c0505267	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
3300002568\|C688J35102_120078287	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	871	Open in IMG/M
3300003574\|Ga0007410J51695_1062792	Not Available	511	Open in IMG/M
3300004114\|Ga0062593_100269589	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300004153\|Ga0063455_100013498	Not Available	1986	Open in IMG/M
3300004629\|Ga0008092_10084063	Not Available	556	Open in IMG/M
3300004799\|Ga0058863_10042127	Not Available	623	Open in IMG/M
3300004800\|Ga0058861_10061927	Not Available	674	Open in IMG/M
3300004803\|Ga0058862_12677245	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300005177\|Ga0066690_10758294	Not Available	636	Open in IMG/M
3300005187\|Ga0066675_10195253	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1418	Open in IMG/M
3300005332\|Ga0066388_100828150	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300005332\|Ga0066388_100997305	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1402	Open in IMG/M
3300005345\|Ga0070692_10182535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Acidithiobacillia → Acidithiobacillales → Acidithiobacillaceae → Acidithiobacillus → Acidithiobacillus ferrivorans	1217	Open in IMG/M
3300005434\|Ga0070709_10193669	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1435	Open in IMG/M
3300005434\|Ga0070709_10303786	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300005434\|Ga0070709_11102045	Not Available	635	Open in IMG/M
3300005434\|Ga0070709_11215537	Not Available	606	Open in IMG/M
3300005435\|Ga0070714_100458551	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1211	Open in IMG/M
3300005435\|Ga0070714_100532522	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1123	Open in IMG/M
3300005436\|Ga0070713_100035803	All Organisms → cellular organisms → Bacteria	3999	Open in IMG/M
3300005436\|Ga0070713_100220708	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1719	Open in IMG/M
3300005436\|Ga0070713_100662245	Not Available	995	Open in IMG/M
3300005436\|Ga0070713_101308118	Not Available	702	Open in IMG/M
3300005437\|Ga0070710_10241700	All Organisms → cellular organisms → Bacteria → Acidobacteria	1157	Open in IMG/M
3300005439\|Ga0070711_100684285	Not Available	862	Open in IMG/M
3300005439\|Ga0070711_100869745	Not Available	768	Open in IMG/M
3300005458\|Ga0070681_10438784	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300005458\|Ga0070681_10472203	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1167	Open in IMG/M
3300005526\|Ga0073909_10547298	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005533\|Ga0070734_10008629	All Organisms → cellular organisms → Bacteria → Acidobacteria	7895	Open in IMG/M
3300005534\|Ga0070735_10000171	All Organisms → cellular organisms → Bacteria	77788	Open in IMG/M
3300005538\|Ga0070731_10031916	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3563	Open in IMG/M
3300005539\|Ga0068853_101625702	Not Available	626	Open in IMG/M
3300005542\|Ga0070732_10004589	All Organisms → cellular organisms → Bacteria	7467	Open in IMG/M
3300005542\|Ga0070732_10362128	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300005547\|Ga0070693_100664380	Not Available	759	Open in IMG/M
3300005554\|Ga0066661_10636413	Not Available	630	Open in IMG/M
3300005555\|Ga0066692_10125950	Not Available	1550	Open in IMG/M
3300005557\|Ga0066704_10174963	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1446	Open in IMG/M
3300005560\|Ga0066670_10503467	Not Available	744	Open in IMG/M
3300005568\|Ga0066703_10360749	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	872	Open in IMG/M
3300005598\|Ga0066706_11370338	Not Available	534	Open in IMG/M
3300005616\|Ga0068852_100801911	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	956	Open in IMG/M
3300006028\|Ga0070717_10463180	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1143	Open in IMG/M
3300006028\|Ga0070717_10593096	Not Available	1005	Open in IMG/M
3300006041\|Ga0075023_100010845	All Organisms → cellular organisms → Bacteria	2360	Open in IMG/M
3300006050\|Ga0075028_100112656	All Organisms → cellular organisms → Bacteria → Proteobacteria	1401	Open in IMG/M
3300006173\|Ga0070716_100780425	Not Available	738	Open in IMG/M
3300006175\|Ga0070712_100010339	All Organisms → cellular organisms → Bacteria → Proteobacteria	5884	Open in IMG/M
3300006755\|Ga0079222_10169545	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1269	Open in IMG/M
3300006755\|Ga0079222_10389198	Not Available	964	Open in IMG/M
3300006797\|Ga0066659_10837114	Not Available	764	Open in IMG/M
3300006806\|Ga0079220_11426074	Not Available	589	Open in IMG/M
3300006806\|Ga0079220_11929996	Not Available	524	Open in IMG/M
3300006854\|Ga0075425_100146092	All Organisms → cellular organisms → Bacteria	2708	Open in IMG/M
3300006854\|Ga0075425_100193807	All Organisms → cellular organisms → Bacteria	2335	Open in IMG/M
3300006954\|Ga0079219_10006279	All Organisms → cellular organisms → Bacteria	3669	Open in IMG/M
3300006954\|Ga0079219_11239990	Not Available	650	Open in IMG/M
3300007788\|Ga0099795_10042201	All Organisms → cellular organisms → Bacteria	1627	Open in IMG/M
3300009098\|Ga0105245_10000645	All Organisms → cellular organisms → Bacteria → Acidobacteria	31623	Open in IMG/M
3300009176\|Ga0105242_10060268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	3117	Open in IMG/M
3300010043\|Ga0126380_11003532	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	703	Open in IMG/M
3300010043\|Ga0126380_11405967	Not Available	613	Open in IMG/M
3300010048\|Ga0126373_10604847	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1149	Open in IMG/M
3300010159\|Ga0099796_10151333	Not Available	914	Open in IMG/M
3300010358\|Ga0126370_11661132	Not Available	613	Open in IMG/M
3300010359\|Ga0126376_11071287	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300010360\|Ga0126372_12869877	Not Available	534	Open in IMG/M
3300010375\|Ga0105239_11733815	Not Available	723	Open in IMG/M
3300010376\|Ga0126381_100565370	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1613	Open in IMG/M
3300010397\|Ga0134124_10143382	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	2123	Open in IMG/M
3300011120\|Ga0150983_12807340	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300011269\|Ga0137392_10001110	All Organisms → cellular organisms → Bacteria → Acidobacteria	15171	Open in IMG/M
3300011442\|Ga0137437_1146921	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	815	Open in IMG/M
3300012212\|Ga0150985_102480649	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1698	Open in IMG/M
3300012381\|Ga0134026_1255482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1038	Open in IMG/M
3300012917\|Ga0137395_10085375	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	2069	Open in IMG/M
3300012917\|Ga0137395_10118440	All Organisms → cellular organisms → Bacteria	1780	Open in IMG/M
3300012925\|Ga0137419_11559578	Not Available	561	Open in IMG/M
3300012944\|Ga0137410_11914404	Not Available	526	Open in IMG/M
3300012951\|Ga0164300_10194505	Not Available	988	Open in IMG/M
3300012957\|Ga0164303_10091004	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300012958\|Ga0164299_10347665	Not Available	932	Open in IMG/M
3300012960\|Ga0164301_10021356	All Organisms → cellular organisms → Bacteria → Acidobacteria	2907	Open in IMG/M
3300012971\|Ga0126369_10477982	All Organisms → cellular organisms → Bacteria	1300	Open in IMG/M
3300012984\|Ga0164309_11751478	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300013105\|Ga0157369_10456356	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1323	Open in IMG/M
3300013307\|Ga0157372_10473555	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1460	Open in IMG/M
3300015053\|Ga0137405_1182455	All Organisms → cellular organisms → Bacteria	6594	Open in IMG/M
3300018431\|Ga0066655_11216393	Not Available	535	Open in IMG/M
3300018468\|Ga0066662_10000091	All Organisms → cellular organisms → Bacteria	34155	Open in IMG/M
3300018468\|Ga0066662_10010373	All Organisms → cellular organisms → Bacteria	4824	Open in IMG/M
3300018468\|Ga0066662_11142958	Not Available	782	Open in IMG/M
3300018482\|Ga0066669_10349304	Not Available	1228	Open in IMG/M
3300020069\|Ga0197907_10391935	Not Available	621	Open in IMG/M
3300020069\|Ga0197907_11430773	Not Available	586	Open in IMG/M
3300020070\|Ga0206356_11130628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	681	Open in IMG/M
3300020070\|Ga0206356_11252125	Not Available	626	Open in IMG/M
3300020078\|Ga0206352_10143004	Not Available	617	Open in IMG/M
3300020078\|Ga0206352_10810989	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	625	Open in IMG/M
3300021362\|Ga0213882_10045246	Not Available	1731	Open in IMG/M
3300021478\|Ga0210402_10149352	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	2127	Open in IMG/M
3300021559\|Ga0210409_10106270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2587	Open in IMG/M
3300021560\|Ga0126371_11396292	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	831	Open in IMG/M
3300022467\|Ga0224712_10399019	Not Available	655	Open in IMG/M
3300025544\|Ga0208078_1015195	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1778	Open in IMG/M
3300025906\|Ga0207699_10692962	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	745	Open in IMG/M
3300025916\|Ga0207663_10392121	Not Available	1060	Open in IMG/M
3300025927\|Ga0207687_10019127	All Organisms → cellular organisms → Bacteria	4534	Open in IMG/M
3300025927\|Ga0207687_10049130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2932	Open in IMG/M
3300025929\|Ga0207664_11290325	Not Available	649	Open in IMG/M
3300025939\|Ga0207665_10082334	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	2218	Open in IMG/M
3300025939\|Ga0207665_10632528	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300025939\|Ga0207665_10659323	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	821	Open in IMG/M
3300026078\|Ga0207702_11293640	Not Available	723	Open in IMG/M
3300026304\|Ga0209240_1062280	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1396	Open in IMG/M
3300026319\|Ga0209647_1058610	All Organisms → cellular organisms → Bacteria	2018	Open in IMG/M
3300026527\|Ga0209059_1352674	Not Available	500	Open in IMG/M
3300026547\|Ga0209156_10214463	Not Available	912	Open in IMG/M
3300026552\|Ga0209577_10710020	Not Available	568	Open in IMG/M
3300027376\|Ga0209004_1063785	Not Available	621	Open in IMG/M
3300027775\|Ga0209177_10015446	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1798	Open in IMG/M
3300027775\|Ga0209177_10496911	Not Available	508	Open in IMG/M
3300027826\|Ga0209060_10006529	All Organisms → cellular organisms → Bacteria → Acidobacteria	7944	Open in IMG/M
3300027842\|Ga0209580_10005504	All Organisms → cellular organisms → Bacteria → Acidobacteria	5389	Open in IMG/M
3300027842\|Ga0209580_10013792	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	3515	Open in IMG/M
3300027903\|Ga0209488_10003984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. DOA9	11657	Open in IMG/M
3300027910\|Ga0209583_10039012	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1621	Open in IMG/M
3300027986\|Ga0209168_10000079	All Organisms → cellular organisms → Bacteria	108901	Open in IMG/M
3300030847\|Ga0075405_12092549	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	974	Open in IMG/M
3300030991\|Ga0073994_10077536	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300031057\|Ga0170834_102962945	Not Available	663	Open in IMG/M
3300031057\|Ga0170834_105487951	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300031231\|Ga0170824_124420300	All Organisms → cellular organisms → Bacteria	1439	Open in IMG/M
3300031446\|Ga0170820_12994249	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	1278	Open in IMG/M
3300031716\|Ga0310813_10721952	Not Available	891	Open in IMG/M
3300031962\|Ga0307479_10155672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2243	Open in IMG/M
3300032174\|Ga0307470_10001595	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8852	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.14%
Host-Associated	Host-Associated	12.14%
Engineered	Engineered	0.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.29%
Plants	Host-Associated → Plants	10.00%
Aquatic	Environmental → Aquatic	2.86%
Human	Host-Associated → Human	2.14%
Solid Waste	Engineered → Solid Waste	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.57%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.57%
Sediment	Environmental → Aquatic → Sediment	2.86%
Digestive System	Host-Associated → Human → Digestive System	2.14%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.71%
Grass	Engineered → Solid Waste → Grass	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.00%
Loam	Environmental → Terrestrial → Soil → Loam	23.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.86%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	2.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.43%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.71%
Composting	Engineered → Solid Waste → Grass → Composting	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	19.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.86%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	2.14%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.14%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.43%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.71%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.71%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.71%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.71%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	15.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.57%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.43%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	5.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.14%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	2.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.14%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.43%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.43%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.43%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.43%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.43%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.43%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.71%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.71%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.71%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.71%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.71%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.71%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.71%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003574	Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_26 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004629	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011442	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012381	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_00892720	2170459003	Grass Soil	EQNTSNRVLNRMGARELSPEEVQHVAGGTTGCHGTSLHKNGPIVDVACDPA
NODE_05052672	3300000156	Sugar Cane Bagasse Incubating Bioreactor	MSNRVLSRIGARELKPEEVEHIAGGTTGCTGTSLFKGGPIVDVRCDPTGQ*
C688J35102_1200782871	3300002568	Soil	MLEQSMWNRVLTRRGARELSPEEVQHVAGGTTGCHGTSLHKNGPIVDVACDPA*
Ga0007410J51695_10627921	3300003574	Avena Fatua Rhizosphere	MLEQNTSNRVLNRRGARELSPEEVQHVAGGTTGCHGTSLHKNGPIVDVACDPA*
Ga0062593_1002695892	3300004114	Soil	MSEQIMSNRVLNRMGARELTTEEIQHVAGGTTGCRGTSLHKNGPIVDVLCDPS*
Ga0063455_1000134983	3300004153	Soil	MLEQSMSNRVLTRRGARELSPEEVQHVAGGTTGCHGTSLHKNGPIVDVACDPA*
Ga0008092_100840632	3300004629	Tropical Rainforest Soil	MLNRVLSRVGTRELTPEEANNVGGGQGTGCFGTSLHKNGPIVDFGCDPTGA*
Ga0058863_100421272	3300004799	Host-Associated	MLEQTMSNRVLTRQGARELTTEEVQHVAGGTTGCQGTSLHKGGPIVDVLCDPT*
Ga0058861_100619272	3300004800	Host-Associated	MLQQDTSNRVLNRMGARELSPEEVQHVAGGTTGCQGTSLHKNGPVVDVLCDPS*
Ga0058862_126772452	3300004803	Host-Associated	EVISLTRSNIMSDQIMSNRVLNRVGARELTTEEVQHVAGGTTGCHGTSLHKNGPIVDVLCDPS*
Ga0066690_107582942	3300005177	Soil	MLEQSTSNRVLNRMGARELSPEEVQHVAGGTTGCHGTSLHKNGPIVDVACDPA*
Ga0066675_101952531	3300005187	Soil	MLEQTKHNRVLSRMGARELTREEVEAVAAGTTTGCRGTSLHKNGPIVDVLCDPS*
Ga0066388_1008281501	3300005332	Tropical Forest Soil	MFAEQKEILSNRVLNRAGARELTREELDHIAGGTTGCHGTSLHKNGPIVDVLCDPS*
Ga0066388_1009973055	3300005332	Tropical Forest Soil	MSEQINPTRVLNRLGARELSPEEVGYVAGATTTGCFGTSLHKNGPIIDF
Ga0070692_101825351	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MLEQIMSNRVLTRQGARELTTEEVQHVAGGTTGCHGTSLHKGGPIV
Ga0070709_101936693	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLEQSTFNRVLNRMGARELSPEEVQHVAGGTTGCHGTSLHKNGPIVDVLCDPS*
Ga0070709_103037863	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLEQTKQNRVLSRMGARELTREEVEVVAGGTTTGCRGTSLHKNGPIVDVLCDPS*
Ga0070709_111020451	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLEQNKQDRVLNRMGARELTREEVEAVAAGTTTGCRGTSLHKNGPIVDILCDPS*
Ga0070709_112155371	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLEQNKQNRVLNRMGARELTREEVEAVAGGTTGCQGTSLHKNGPIVDVLCDPS*
Ga0070714_1004585512	3300005435	Agricultural Soil	MFEQSTSSRVLNRMGARELSPEEVQHVAGGTTGCHGTSLHKNGPIVDVACDPA*
Ga0070714_1005325223	3300005435	Agricultural Soil	MLEQIMSNRVLTRQGARELTTEEVQHVAGGTTGCHGTSLHKGGPIVDVLCDPS*
Ga0070713_1000358032	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MLEQNKQNRVLNRMGARELTTEEVQYVAGGTTGCQGTSLHKNGPIVDVLCDPS*
Ga0070713_1002207081	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MLEQSTFNRVLNRMGARELSPEEVQHVAGGTTGCHGTSLHKNGP
Ga0070713_1006622452	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MLEQNKQNRVLNRVGARELTREEVQHVAGGTTGCQGTSLHKNGPIVDVLCDPS*
Ga0070713_1013081181	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MFEQSTSNRVLNRMGARELSPEEVQHVAGGTTGCHGTSLHKNGPIVDVACDPA*
Ga0070710_102417001	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSEQIMSNRVLNRMGARELTTEEVQHVAGGTTGCRGTSLHKNGPIVDVLCDPS*
Ga0070711_1006842852	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MEQTKQNRVLTRMGARELTREEVEAVAGGTTTGCRGTSLHKNGPIVDVLCDPS*
Ga0070711_1008697452	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MFEQSTSNRVLNRMGARELSPEEVQHVAGGTTGCHGTSLHKNGPIVDVLCDPS*
Ga0070681_104387841	3300005458	Corn Rhizosphere	MLEQIMSNRVLTRQGARELTTEEVQHVAGGTTGCQGTSLHKGGPIVDVLCDPT*
Ga0070681_104722031	3300005458	Corn Rhizosphere	NRVLNRMGARELSPEEVQHVAGGTTGCQGTSLHKGGPIVDVLCDPS*
Ga0073909_105472981	3300005526	Surface Soil	MFTEKKQIMPERVLNRVGARDLTREEVDHIAAGSTGCHGTSLHKNGPIVDVSCDPS*
Ga0070734_100086295	3300005533	Surface Soil	MLEQSTSNRVLNRMGARELSPEEVQYVAGGTTGCQGTSLHKNGPIVDVLCDPS*
Ga0070735_100001712	3300005534	Surface Soil	MSNRVLNRVGARELTPAEAEYVVGAGSTGTGCVGTSLHPHGPIIDQKCDIDL*
Ga0070731_100319162	3300005538	Surface Soil	MSNRVLNRVGARQLTPEEVDNIAGGQSGTGCRGTSLHKGGPIVDILCEPNL*
Ga0068853_1016257022	3300005539	Corn Rhizosphere	MLEQSTSNRVLNRMGARELSPEEVQHVAGGTTGCQGTSLHKGGPIVDVLCDPS*
Ga0070732_100045898	3300005542	Surface Soil	MLEQIMSNRVLSRRGARELSPEEVQHVAGGTTGCHGTSLHKNGPIVDVACDPS*
Ga0070732_103621281	3300005542	Surface Soil	MSNRVLSRVGARQLTPQEVEQVAGGTTGCRGTSLHKGGPIVDILCDPS*
Ga0070693_1006643802	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MLEQNTSDRVLNRMGARELTTEEVQHVAGGTTGCHGTSLHKGGPIVDILCDPS*
Ga0066661_106364133	3300005554	Soil	MPDRVLNRLGARELTPEEVEQIAGGTTTGCRGTSLHKNGPIIDVACDPS*
Ga0066692_101259503	3300005555	Soil	MSDQSMSNRVLNRMGARELTTEEVQHVAGGTTGCHGTSLHKNGPIVDVLCDPS*
Ga0066704_101749632	3300005557	Soil	MVEQTKHNRVLSRMGARELTREEVEAVAAGTTTGCRGTSLHKNGPIVDVLCDPS*
Ga0066670_105034671	3300005560	Soil	MPDRVLNRLGARELTPEEVEQIAGGTTTGCRGTSLHKNGPIVDILCDPS*
Ga0066703_103607493	3300005568	Soil	MHNRVLSRAGARELTPEEVSKVGGAQGTGCFGTSLHKNGPIVDFGCDPA*
Ga0066706_113703382	3300005598	Soil	MSNRVLNRVGARELTPEEVENVAGGTDTGCRGTSLHKNGPVID
Ga0068852_1008019113	3300005616	Corn Rhizosphere	DTSNRVLNRMGARELSPEEVQHVAGGTTGCQGTSLHKNGPVVDVLCDPS*
Ga0070717_104631801	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	KKEQIMLEQSTSNRVLNRMGARELSPEEVQHVAGGTTGCQGTSLHKGGPIVDVLCDPS*
Ga0070717_105930961	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLEQNKQNRVLNRMGARELTSEEVQYVAGGTTGCQGTSLHKNGPIVDVLCDPS*
Ga0075023_1000108452	3300006041	Watersheds	MFTEKNQTMSNRVLTRMGARELTTEEVQHVAGGTTGCHGTSLHKNGPIVDVSCDPSF*
Ga0075028_1001126562	3300006050	Watersheds	MMEQIAQNRVLNRMGARELTPEEVQHVAGGTTGCHGTSLHKNGPIVDVLCDPS*
Ga0070716_1007804252	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MEQSTSNRVLNRMGARQLSPEEVQHVAGGTTGCHGTSLHKNGPIVDVACDPA*
Ga0070712_1000103395	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MEQTKQNRVLNRMGARELTREEVEAVAGGTTTGCRGTSLHKNGPIVDVLCDPN*
Ga0079222_101695452	3300006755	Agricultural Soil	MLEQTKHNRVLSRVGARELTREEVEAVAAGTTTGCRGTSLHKNGPIVDILCDPS*
Ga0079222_103891982	3300006755	Agricultural Soil	MLEQTKQNRVLNRMGARELTPEEVKYVAGGTTGCQGTSLHKNGPIVDILCDPS*
Ga0066659_108371142	3300006797	Soil	MSNRVLNRVGARELTPEEAEQTAGGTTTGCRGTSLHKNGPIIDVLCDPS*
Ga0079220_114260742	3300006806	Agricultural Soil	VLNRMGARELTPEEVKYVAGGTTGCQGTSLHKNGPIVDILCDPS*
Ga0079220_119299962	3300006806	Agricultural Soil	MLEQTKHNRVLSRVGARELTREEVEAVAAGTTTGCRGTSLHKNGPI
Ga0075425_1001460922	3300006854	Populus Rhizosphere	MSNRVMSRVGARELTTEEVEQIAGGWDTGCRGTSLHKNGPIVDVLCDPS*
Ga0075425_1001938071	3300006854	Populus Rhizosphere	MFTEKKQIMPERVLNRVGARDLKREEVDHIAAGSTGCHGTSLHKNGPIVDVSCDPS*
Ga0079219_100062791	3300006954	Agricultural Soil	MSEQIMPNRVLNRMGARELTTEEVQHVAGGTTGCRGTSLHKNGPIVDVLCDPS*
Ga0079219_112399902	3300006954	Agricultural Soil	MLKQTKQNRVLKRMGARELTTEEVQYVAGGTTGCQGTSLHKNGPIVDVLCDPS*
Ga0099795_100422012	3300007788	Vadose Zone Soil	MLQQIMSNRVLTRRGARELSPEEVQHVAGGTTGCHGTSLHKNGPIVDVACDPA*
Ga0105245_1000064528	3300009098	Miscanthus Rhizosphere	MLEQSTSNRVLNRMGARELSPKEVQHVAGGTTGCQGTSLHKNGPIVDVLCDPS*
Ga0105242_100602685	3300009176	Miscanthus Rhizosphere	MLEQIMSNRVLTRQGARELTTEEVQHVAGGTTGCHGTSLHKGGPIVDVLCDPT*
Ga0126380_110035322	3300010043	Tropical Forest Soil	MSNRVLTRRGARELTTEEVQHIAGGTTGCHGTSLHKNGPIVDVACDPS*
Ga0126380_114059672	3300010043	Tropical Forest Soil	MLEQSMSNRVLNRMGARELTTEEVQHVAGGTTGCHGTSLHKGGPIVDVLCDPS*
Ga0126373_106048473	3300010048	Tropical Forest Soil	GARELTPEEVQHIAGATTGCFGTSLHKGGPIVDFGCDPND*
Ga0099796_101513333	3300010159	Vadose Zone Soil	MLEQIMSNRVLTRRGARELSPEEVQHVAGGTTGCHGTSLHKNGPIVDVLCDPS*
Ga0126370_116611322	3300010358	Tropical Forest Soil	MLKETRQNRVLNRLGARELTREEVAAVAAGTTTGCRGTSLHKNGPIVDVLCDPS*
Ga0126376_110712872	3300010359	Tropical Forest Soil	MSNRVLTRRGARELTTEEVQHIAGGTTGCHGTSLHKNGPIVDIACDPS*
Ga0126372_128698771	3300010360	Tropical Forest Soil	MSNRVLTRRGARELTTEEVQHIAGGATGCHGTSLHKNGPIVDVACDPS*
Ga0105239_117338152	3300010375	Corn Rhizosphere	MLEQIMSDRVLTRQGARELTTEEVQHVAGGTTGCHGTSLHKGGPIVDVLCDPS*
Ga0126381_1005653703	3300010376	Tropical Forest Soil	MLEQTRQDRVLNRMGARELTREEVAAVAAGTTTGCRGTSLHKNGPIVDVLCDPS*
Ga0134124_101433822	3300010397	Terrestrial Soil	MEQSTSNRVLNRMGARELSPEEVQHVAGGTTGCHGTSLHKNGPIVDVACDPA*
Ga0150983_128073402	3300011120	Forest Soil	MLKETTQNRVLNRLGARELTSEEVQHIAGGTTGCHGTSLHKNGPIVDVQCDPA*
Ga0137392_100011103	3300011269	Vadose Zone Soil	MLQQIMSNRVLTRRGARELSPEEVQHVAGGTTGCHGTSLHKNGPIVDVECDPA*
Ga0137437_11469211	3300011442	Soil	KKVISLKKEQIMLEQSTSKRVLNRMGARELSPEEVQHVAGGTTGCQGTSLHKNGPIVDVLCDPS*
Ga0150985_1024806493	3300012212	Avena Fatua Rhizosphere	NRVLTRRGARELSPEEVQHVAGGTTGCHGTSLHKNGPIVDVACDPA*
Ga0134026_12554821	3300012381	Grasslands Soil	MSNRVLNRLGARELTPEEAEQTGGGTTTGCRGTSLHKNGPIIDVLCDPS*
Ga0137395_100853752	3300012917	Vadose Zone Soil	MLQQIMSNRVLTRRGARELTPEEVQHVAGGTTGCHGTSLHKNGPIVDVECDPA*
Ga0137395_101184402	3300012917	Vadose Zone Soil	MLEQTKQNRVLSRVGARELTREEVEAVAAGTTTGCRGTSLHKGGPIVDVLCDPS*
Ga0137419_115595782	3300012925	Vadose Zone Soil	MLEQIMSNRVLTRRGARELTPEEVQHVAGGTTGCHGTSLHKNGPIVDVACDPA*
Ga0137410_119144041	3300012944	Vadose Zone Soil	MDNRVLVRKGARELTPEEVHHVAGGTTGCHGTSLHKNGPIVDVACDPA*
Ga0164300_101945051	3300012951	Soil	MLEQTMSNRVLTRRGARELTTEEVQHVAGGTTGCHGTSLHKNGPIVDVLCDPS*
Ga0164303_100910042	3300012957	Soil	MFTEKKQIMPERVLNRVGARDLTREEVDHIAAGSTACHGTSLHKNGPIVDVSCDPS*
Ga0164299_103476652	3300012958	Soil	MLEQTMSNRVLTRRGARELTTQEVQHVAGGTTGCHGTSLHKNGPIVDVLCDPS*
Ga0164301_100213564	3300012960	Soil	MLEQSTSNRVLNRMGARELSPEEVQHVAGGTTGCQGTSLHKNGPIVDVLCDPS*
Ga0126369_104779822	3300012971	Tropical Forest Soil	MFTEKKQTIPDRVLNRMGARELTREEVDHIAAGSTGCHGTSLHKNGPIVDVSCDPS*
Ga0164309_117514782	3300012984	Soil	VIHLRKEQIMSEQIMSNRVLNRMGARELTTEEIQHVAGGTTGCHGTSLHKNGPIVDVLCDPS*
Ga0157369_104563561	3300013105	Corn Rhizosphere	KKEQIMLQQDTSNRVLNRMGARELSPEEVQHVAGGTTGCQGTSLHKNGPVVDVLCDPS*
Ga0157372_104735552	3300013307	Corn Rhizosphere	MLEQIMSNRVLTRQGARELTIEEVQHVAGGTTGCQGTSLHKGGPRVDVRCDPS*
Ga0137405_11824558	3300015053	Vadose Zone Soil	MLEQTMSNRVLTRRGARQLTPEEVQHVAGGTTGCRGTSLHKNGPIVDVECDPS*
Ga0066655_112163931	3300018431	Grasslands Soil	MLEQSMSNRVLTRRGARELSPEEVQHVAGGTTGCHGTSLHKNGPIV
Ga0066662_1000009140	3300018468	Grasslands Soil	MHNRVLSRAGARELTPEEVSKVGGAQGTGCFGTSLHKNGPIVDFGCDPA
Ga0066662_100103735	3300018468	Grasslands Soil	MLNRVLSRVSARELTPEEVNNVGGGQGTGCHGTSLHKNGPIVDVACDPS
Ga0066662_111429581	3300018468	Grasslands Soil	MSNRVLNRVGARELTPEEAEQTAGGTTTGCRGTSLHKNGPIVDILCDPS
Ga0066669_103493042	3300018482	Grasslands Soil	MSNRVLNRVGARDLTPEEAEQTAGGTTTGCRGTSLHKNGPIVDVLCDPS
Ga0197907_103919352	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MLQQDTSNRVLNRMGARELSPEEVQHVAGGTTGCQGTSLHKNGPVVDVLCDPS
Ga0197907_114307731	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MLEQIMSNRVLTRQGARELTTEEVQHVAGGTTGCHGTSLHKGGPIVDVLCDPS
Ga0206356_111306283	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	AIETHSLKKEQIMLQQDTSNRVLNRMGARELSPEEVQHVAGGTTGCQGTSLHKNGPVVDVLCDPS
Ga0206356_112521251	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MLEQTMSNRVLTRQGARELTTEEVQHVAGGTTGCQGTSLHKGGPIVDVLCDPT
Ga0206352_101430042	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MLEQIMSNRVLTRQGARELTTEEVQHVAGGTTGCQGTSLHKGGPIVDVRCDPS
Ga0206352_108109891	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MLEQSTSNRVLNRMGARELSPEEVQHVAGGTTGCQGTSLHKGGPIVDVLCDPS
Ga0213882_100452462	3300021362	Exposed Rock	MSNRVLSRVGARELTPAEVENVVGAGTGCVGTSIHPNGPIVDQRCDIQLP
Ga0210402_101493523	3300021478	Soil	MKQDNRVLGRVGARELTQEEVEHVTGAGTGCRGTSLHPGGPVVDVLCDIDRP
Ga0210409_101062705	3300021559	Soil	MSNRVLNRVGARNLTPEEAEKVAGGSTGCRGTSLHPNGPIVDVLCDPN
Ga0126371_113962921	3300021560	Tropical Forest Soil	MSKNETNRVLNRMGARELTREEVAAVAAGTPTGCRGPPLHQNGPIVDVLCDPS
Ga0224712_103990192	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MSNRVLSRIGARELKPEEVEHIAGGTTGCTGTSLFKGGPIVDVRCDPTGQ
Ga0208078_10151953	3300025544	Arctic Peat Soil	MLEQIMSNRVLTRRGARELTPEEVQHVAGGTTGCHGTSLHKNGPIVDVECDPA
Ga0207699_106929621	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VISLKKEQNMLEQNKQNRVLNRMGARELTTEEVQYVAGGTTGCQGTSLHKNGPIVDVLCDPS
Ga0207663_103921211	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MEQTKQNRVLTRMGARELTREEVEAVAGGTTTGCRGTSLHKNGPIVDVLCDPS
Ga0207687_100191277	3300025927	Miscanthus Rhizosphere	WSHRQSTSNRVLNRMGARELSPKEVQHVAGGTTGCQGTSLHKNGPIVDVLCDPS
Ga0207687_100491304	3300025927	Miscanthus Rhizosphere	MLEQSTSNRVLNRMGARELSPKEVQHVAGGTTGCQGTSLHKNGP
Ga0207664_112903252	3300025929	Agricultural Soil	MLEQSTFNRVLNRMGARELSPEEVQHVAGGTTGCHGTSLHKNGPIVDVACDPA
Ga0207665_100823345	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MLEQNKQDRVLNRMGARELTREEVEAVAAGTTTGCRGTSLHKNGPIVDVLCDPS
Ga0207665_106325282	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MSEPIIATRVLTRQGARELTTEEVQHIAGGTTGCRGTSLHKNGPIVDVLCDPS
Ga0207665_106593232	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MEQSTSNRVLNRMGARQLSPEEVQHVAGGTTGCHGTSLHKNGPIVDVACDPA
Ga0207702_112936402	3300026078	Corn Rhizosphere	MLQQDTSNRVLNRMGARELSPEEVQHVAGGTTGCQGTSLHKNGPIVDVLCDPS
Ga0209240_10622802	3300026304	Grasslands Soil	MLQQIMSNRVLTRRGARELTPEEVQHVAGGTTGCHGTSLHKNGPIVDVECDPA
Ga0209647_10586103	3300026319	Grasslands Soil	MLQQIMSNRVLTRRGARELTPEEVQHVAGGTTGCHGTSLHKNGPIVDVLCDPS
Ga0209059_13526742	3300026527	Soil	MSEQILSSRVLNRRGARELTPEEVQHIAGGTTGCHGTSLHKNGPIVDVACDPA
Ga0209156_102144631	3300026547	Soil	MLEQTKHNRVLSRMGARELTREEVEAVAAGTTTGCRGTSLHKNGPIVDVLCDPS
Ga0209577_107100201	3300026552	Soil	MSNRVLNRVGARELTPEEVENVAGGTDTGCRGTSLHKNGPVIDVACDPG
Ga0209004_10637852	3300027376	Forest Soil	MLEKSTSNRVLNRMGARELTTEEVQHVAGGTTTGCRGTSLHKGGPIVDVLCDPS
Ga0209177_100154461	3300027775	Agricultural Soil	QFGEVISFTRSKIMSEQIMPNRVLNRMGARELTTEEVQHVAGGTTGCRGTSLHKNGPIVDVLCDPS
Ga0209177_104969112	3300027775	Agricultural Soil	MLKQTKQNRVLNRMGARELTTEEVQYVAGGTTGCQGTSLHKNGPIVDVLCDPS
Ga0209060_100065298	3300027826	Surface Soil	MLEQSTSNRVLNRMGARELSPEEVQYVAGGTTGCQGTSLHKNGPIVDVLCDPS
Ga0209580_100055042	3300027842	Surface Soil	MSNRVLNRVGARQLTPEEVDNIAGGQSGTGCRGTSLHKGGPIVDILCEPNL
Ga0209580_100137924	3300027842	Surface Soil	MLEQIMSNRVLSRRGARELSPEEVQHVAGGTTGCHGTSLHKNGPIVDVACDPS
Ga0209488_100039842	3300027903	Vadose Zone Soil	MLQQIMSNRVLTRRGARELSPEEVQHVAGGTTGCHGTSLHKNGPIVDVACDPA
Ga0209583_100390121	3300027910	Watersheds	MFTEKNQTMSNRVLTRMGARELTTEEVQHVAGGTTGCHGTSLHKNGPIVDVSCDPSF
Ga0209168_1000007983	3300027986	Surface Soil	MSNRVLNRVGARELTPAEAEYVVGAGSTGTGCVGTSLHPHGPIIDQKCDIDL
Ga0075405_120925492	3300030847	Soil	MEQNTSNRVLNRMGARELSSEEIQHVAGGTTGCRGTSLHKGGPIVDVLCDPS
Ga0073994_100775361	3300030991	Soil	MLEQIMSNRVLTRRGARELSPEEVQHVAGGTTGCHGTSLHKNGPIVDVACDPA
Ga0170834_1029629451	3300031057	Forest Soil	MLEQSISNRVLNRIGARELSPEEVQHVAGGTTGCQGTSLHKNGPIVDVLCDPN
Ga0170834_1054879511	3300031057	Forest Soil	MLELNTSNRVLNRMGARELTTEEVQHVAGGTTGCHGTSLHKNGPIVDVLCDPS
Ga0170824_1244203002	3300031231	Forest Soil	MLELNTSNRVLNRMGARELTTEEVQHVAGGTTGCHGTSLHKGGPIVDVLCDPS
Ga0170820_129942492	3300031446	Forest Soil	MLEQIMSNRVLTRRGARELSPEEVQHVAGGTTGCRGTSLHKGGPIVDVLCDPS
Ga0310813_107219522	3300031716	Soil	MLKQTKQNRVLKRMGARELTTEEVQYVAGGTTGCQGTSLHKNGPIVDVLCDPS
Ga0307479_101556722	3300031962	Hardwood Forest Soil	MLEQTKQNRVLSRVGARELTREEVEAVAAGTTTGCRGTSLHKNGPIVDILCDPS
Ga0307470_100015956	3300032174	Hardwood Forest Soil	MSNRVLSRSGARDLTYEEVQHVAGAQGTGCRGTALHPGGPIVDVLCEPDF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054281

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences