Metagenome Family F054428

Basic Information
Family ID	F054428
Family Type	Metagenome
Number of Sequences	140
Average Sequence Length	88 residues
Representative Sequence	MPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSRARDGI
Number of Associated Samples	124
Number of Associated Scaffolds	140

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	62.14 %
% of genes near scaffold ends (potentially truncated)	31.43 %
% of genes from short scaffolds (< 2000 bps)	83.57 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Most Common Taxonomy
Group	Bacteria (56.429 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (14.286 % of family members)
Environment Ontology (ENVO)	Unclassified (32.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.143 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.55% β-sheet: 0.00% Coil/Unstructured: 45.45%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.74.1.0: automated matches	d3mi9b1	3mi9	0.70836
a.74.1.1: Cyclin	d2i53a1	2i53	0.70048
c.2.1.0: automated matches	d7mf4a2	7mf4	0.68999
f.49.1.1: Proton glutamate symport protein	d7ahka1	7ahk	0.67783
a.128.1.0: automated matches	d6a1ia2	6a1i	0.6755

Pfam ID	Name	% Frequency in 140 Family Scaffolds
PF13763	DUF4167	12.86
PF09361	Phasin_2	7.14
PF00484	Pro_CA	6.43
PF12307	DUF3631	3.57
PF03150	CCP_MauG	1.43
PF04389	Peptidase_M28	1.43
PF05694	SBP56	1.43
PF00313	CSD	1.43
PF05559	DUF763	1.43
PF01925	TauE	0.71
PF00033	Cytochrome_B	0.71
PF01609	DDE_Tnp_1	0.71
PF13360	PQQ_2	0.71
PF02586	SRAP	0.71
PF17201	Cache_3-Cache_2	0.71
PF00239	Resolvase	0.71
PF13683	rve_3	0.71
PF14248	DUF4345	0.71
PF03960	ArsC	0.71
PF03330	DPBB_1	0.71

COG ID	Name	Functional Category	% Frequency in 140 Family Scaffolds
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	6.43
COG1415	Uncharacterized conserved protein, DUF763 domain	Function unknown [S]	1.43
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	1.43
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.71
COG1290	Cytochrome b subunit of the bc complex	Energy production and conversion [C]	0.71
COG1393	Arsenate reductase or related protein, glutaredoxin family	Inorganic ion transport and metabolism [P]	0.71
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.71
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.71
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.71
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.71
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.71
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.71
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.71
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.71
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.71

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.43 %
Unclassified	root	N/A	43.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.43 %
Unclassified	root	N/A	43.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.43 %
Unclassified	root	N/A	43.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	40.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.57 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	35.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.57 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	29.29 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.57 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	12.86 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	4.29 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.43 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.71 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.57 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	12.86 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	4.29 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.71 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.71 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.57 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	12.86 %
Methyloceanibacter marginalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	1.43 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.71 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.71 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.57 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	12.86 %
Methyloceanibacter marginalis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	1.43 %
Bradyrhizobium sp. STM 3843	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	0.71 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.71 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.71 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig826533	Not Available	1030	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100165360	Not Available	532	Open in IMG/M
3300000559\|F14TC_104083990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	626	Open in IMG/M
3300000787\|JGI11643J11755_11578532	Not Available	512	Open in IMG/M
3300000890\|JGI11643J12802_11349007	Not Available	686	Open in IMG/M
3300000953\|JGI11615J12901_10112966	Not Available	819	Open in IMG/M
3300000955\|JGI1027J12803_102824194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	564	Open in IMG/M
3300001431\|F14TB_102719140	Not Available	540	Open in IMG/M
3300002076\|JGI24749J21850_1075496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	525	Open in IMG/M
3300002120\|C687J26616_10008740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4041	Open in IMG/M
3300002120\|C687J26616_10023303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2322	Open in IMG/M
3300002244\|JGI24742J22300_10089601	Not Available	587	Open in IMG/M
3300002503\|C687J35164_10014225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2684	Open in IMG/M
3300004463\|Ga0063356_100613455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1474	Open in IMG/M
3300004479\|Ga0062595_101005739	Not Available	717	Open in IMG/M
3300004479\|Ga0062595_101695167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	595	Open in IMG/M
3300004480\|Ga0062592_100169340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1493	Open in IMG/M
3300004643\|Ga0062591_100376275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1161	Open in IMG/M
3300005093\|Ga0062594_100570010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	982	Open in IMG/M
3300005332\|Ga0066388_100085631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3549	Open in IMG/M
3300005332\|Ga0066388_104301710	Not Available	726	Open in IMG/M
3300005335\|Ga0070666_10154128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1604	Open in IMG/M
3300005338\|Ga0068868_100359492	All Organisms → cellular organisms → Bacteria → Proteobacteria	1249	Open in IMG/M
3300005339\|Ga0070660_100014970	All Organisms → cellular organisms → Bacteria	5594	Open in IMG/M
3300005339\|Ga0070660_100106006	All Organisms → cellular organisms → Bacteria	2232	Open in IMG/M
3300005340\|Ga0070689_100383073	All Organisms → cellular organisms → Bacteria → Proteobacteria	1185	Open in IMG/M
3300005354\|Ga0070675_100558458	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1036	Open in IMG/M
3300005355\|Ga0070671_101315782	Not Available	637	Open in IMG/M
3300005364\|Ga0070673_102220519	Not Available	522	Open in IMG/M
3300005366\|Ga0070659_100189063	Not Available	1692	Open in IMG/M
3300005406\|Ga0070703_10011483	All Organisms → cellular organisms → Bacteria	2502	Open in IMG/M
3300005438\|Ga0070701_10185472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1221	Open in IMG/M
3300005518\|Ga0070699_101130207	Not Available	719	Open in IMG/M
3300005530\|Ga0070679_100060529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3773	Open in IMG/M
3300005546\|Ga0070696_100472794	Not Available	993	Open in IMG/M
3300005764\|Ga0066903_100573627	All Organisms → cellular organisms → Bacteria	1944	Open in IMG/M
3300005764\|Ga0066903_101696848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1202	Open in IMG/M
3300005764\|Ga0066903_105202476	Not Available	688	Open in IMG/M
3300005834\|Ga0068851_10323950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	891	Open in IMG/M
3300006049\|Ga0075417_10553714	Not Available	582	Open in IMG/M
3300006806\|Ga0079220_12091228	Not Available	507	Open in IMG/M
3300006844\|Ga0075428_100469619	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300006852\|Ga0075433_10040979	All Organisms → cellular organisms → Bacteria → Proteobacteria	4011	Open in IMG/M
3300006852\|Ga0075433_11161762	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300006854\|Ga0075425_101261283	Not Available	839	Open in IMG/M
3300006871\|Ga0075434_100264772	All Organisms → cellular organisms → Bacteria	1738	Open in IMG/M
3300006871\|Ga0075434_100847111	Not Available	930	Open in IMG/M
3300006903\|Ga0075426_10873835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	678	Open in IMG/M
3300006904\|Ga0075424_101575446	Not Available	697	Open in IMG/M
3300006969\|Ga0075419_10515006	Not Available	832	Open in IMG/M
3300009094\|Ga0111539_10218626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	2219	Open in IMG/M
3300009147\|Ga0114129_10728769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1271	Open in IMG/M
3300009156\|Ga0111538_10126781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3242	Open in IMG/M
3300009162\|Ga0075423_11144386	Not Available	829	Open in IMG/M
3300009166\|Ga0105100_10391090	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300009545\|Ga0105237_11471232	Not Available	688	Open in IMG/M
3300009553\|Ga0105249_11533943	Not Available	739	Open in IMG/M
3300010046\|Ga0126384_11051221	Not Available	744	Open in IMG/M
3300010046\|Ga0126384_11465030	Not Available	639	Open in IMG/M
3300010359\|Ga0126376_10179925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1729	Open in IMG/M
3300010361\|Ga0126378_10887382	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300010366\|Ga0126379_11680508	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300010373\|Ga0134128_10418561	All Organisms → cellular organisms → Bacteria	1496	Open in IMG/M
3300010375\|Ga0105239_10159527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2519	Open in IMG/M
3300010376\|Ga0126381_101589975	Not Available	945	Open in IMG/M
3300010400\|Ga0134122_10043507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3432	Open in IMG/M
3300012882\|Ga0157304_1112604	Not Available	510	Open in IMG/M
3300012891\|Ga0157305_10188898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	583	Open in IMG/M
3300012899\|Ga0157299_10267943	Not Available	550	Open in IMG/M
3300012901\|Ga0157288_10202630	Not Available	634	Open in IMG/M
3300012902\|Ga0157291_10083050	Not Available	836	Open in IMG/M
3300012906\|Ga0157295_10037702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1086	Open in IMG/M
3300012910\|Ga0157308_10260623	Not Available	616	Open in IMG/M
3300012948\|Ga0126375_11511389	Not Available	574	Open in IMG/M
3300012960\|Ga0164301_10828091	Not Available	711	Open in IMG/M
3300012961\|Ga0164302_10117066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843	1507	Open in IMG/M
3300013096\|Ga0157307_1028772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	956	Open in IMG/M
3300013096\|Ga0157307_1046256	Not Available	801	Open in IMG/M
3300013297\|Ga0157378_10398601	Not Available	1355	Open in IMG/M
3300013306\|Ga0163162_10397476	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300014270\|Ga0075325_1001309	All Organisms → cellular organisms → Bacteria → Proteobacteria	4106	Open in IMG/M
3300014271\|Ga0075326_1276239	Not Available	522	Open in IMG/M
3300014272\|Ga0075327_1216335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter marginalis	616	Open in IMG/M
3300014320\|Ga0075342_1008250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2203	Open in IMG/M
3300014968\|Ga0157379_11181733	Not Available	735	Open in IMG/M
3300014969\|Ga0157376_11507412	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300015077\|Ga0173483_10122347	Not Available	1114	Open in IMG/M
3300015372\|Ga0132256_100551996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1265	Open in IMG/M
3300015373\|Ga0132257_104525342	Not Available	506	Open in IMG/M
3300016445\|Ga0182038_11240930	Not Available	665	Open in IMG/M
3300017792\|Ga0163161_10843875	Not Available	773	Open in IMG/M
3300019356\|Ga0173481_10050357	Not Available	1430	Open in IMG/M
3300019356\|Ga0173481_10754761	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300019361\|Ga0173482_10090137	Not Available	1092	Open in IMG/M
3300019361\|Ga0173482_10295077	All Organisms → cellular organisms → Bacteria	711	Open in IMG/M
3300019361\|Ga0173482_10363989	Not Available	660	Open in IMG/M
3300019487\|Ga0187893_10106244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2448	Open in IMG/M
3300019487\|Ga0187893_10176685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1683	Open in IMG/M
3300021560\|Ga0126371_10183400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2179	Open in IMG/M
3300021560\|Ga0126371_13067119	Not Available	565	Open in IMG/M
3300023077\|Ga0247802_1047706	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	671	Open in IMG/M
3300025159\|Ga0209619_10337525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	792	Open in IMG/M
3300025160\|Ga0209109_10021805	Not Available	3456	Open in IMG/M
3300025318\|Ga0209519_10119711	Not Available	1553	Open in IMG/M
3300025326\|Ga0209342_10718267	Not Available	798	Open in IMG/M
3300025899\|Ga0207642_10127113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1324	Open in IMG/M
3300025907\|Ga0207645_10256350	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300025911\|Ga0207654_10105984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1740	Open in IMG/M
3300025916\|Ga0207663_10221467	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300025918\|Ga0207662_10467342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	865	Open in IMG/M
3300025919\|Ga0207657_10010997	All Organisms → cellular organisms → Bacteria	8996	Open in IMG/M
3300025921\|Ga0207652_10061618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3240	Open in IMG/M
3300025926\|Ga0207659_10340859	Not Available	1241	Open in IMG/M
3300025936\|Ga0207670_10687108	Not Available	846	Open in IMG/M
3300025938\|Ga0207704_10105065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1893	Open in IMG/M
3300025942\|Ga0207689_11753413	Not Available	514	Open in IMG/M
3300025960\|Ga0207651_10881980	Not Available	796	Open in IMG/M
3300025972\|Ga0207668_11582989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	591	Open in IMG/M
3300026035\|Ga0207703_11627599	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	621	Open in IMG/M
3300026535\|Ga0256867_10116519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1020	Open in IMG/M
3300027511\|Ga0209843_1058150	Not Available	676	Open in IMG/M
3300027907\|Ga0207428_10755591	Not Available	693	Open in IMG/M
3300027907\|Ga0207428_10891610	Not Available	629	Open in IMG/M
3300028379\|Ga0268266_11004526	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300030006\|Ga0299907_10145439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1959	Open in IMG/M
3300030619\|Ga0268386_10040531	All Organisms → cellular organisms → Bacteria	3679	Open in IMG/M
3300031229\|Ga0299913_11353119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	668	Open in IMG/M
3300031538\|Ga0310888_10779813	Not Available	591	Open in IMG/M
3300031545\|Ga0318541_10431036	Not Available	737	Open in IMG/M
3300031562\|Ga0310886_10105282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1414	Open in IMG/M
3300031573\|Ga0310915_10151177	All Organisms → cellular organisms → Bacteria → Proteobacteria	1605	Open in IMG/M
3300031698\|Ga0315537_1232487	Not Available	768	Open in IMG/M
3300031720\|Ga0307469_11430501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	660	Open in IMG/M
3300031744\|Ga0306918_10405132	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300031913\|Ga0310891_10029063	All Organisms → cellular organisms → Bacteria	1440	Open in IMG/M
3300031942\|Ga0310916_10780209	All Organisms → cellular organisms → Bacteria	806	Open in IMG/M
3300032061\|Ga0315540_10365745	Not Available	584	Open in IMG/M
3300032179\|Ga0310889_10021369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2265	Open in IMG/M
3300032205\|Ga0307472_102004313	Not Available	580	Open in IMG/M
3300033407\|Ga0214472_10028213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5784	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.00%
Host-Associated	Host-Associated	35.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	62.86%
Plants	Host-Associated → Plants	35.00%
Aquatic	Environmental → Aquatic	2.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.57%
Marine	Environmental → Aquatic → Marine	1.43%
Cave	Environmental → Terrestrial → Cave	1.43%
Freshwater	Environmental → Aquatic → Freshwater	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.43%
Loam	Environmental → Terrestrial → Soil → Loam	15.00%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.86%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.43%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.43%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.71%
Sand	Environmental → Terrestrial → Soil → Sand	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.14%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.57%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.86%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	2.86%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.43%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.43%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.43%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.43%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.71%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	14.29%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.43%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.29%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.86%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.86%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	2.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.14%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.14%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.14%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.14%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	1.43%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.43%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.43%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.43%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.43%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	1.43%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.43%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.43%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.43%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.71%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.71%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.71%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002076	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3	Host-Associated	Open in IMG/M
3300002120	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2	Environmental	Open in IMG/M
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300002503	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014271	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2	Environmental	Open in IMG/M
3300014272	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300025159	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025318	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031698	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1602-70	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032061	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-10	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_07849730	2124908045	Soil	MPLNEIPSYLGPETRRLIELALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSRACDGI
INPhiseqgaiiFebDRAFT_1001653601	3300000364	Soil	MPLNEIPKYISSETRSLIDSALDQAWQELKRDGPADIDLA*RKLAGTIVALASVGETDPAKLKRFALHAARGMADSA
F14TC_1040839902	3300000559	Soil	MTGHDVVCVALSGNSIMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPSLGRRKMAGTIVALTSVGETDXAKLKFFALHALRGARVSRACDGI*
JGI11643J11755_115785321	3300000787	Soil	MPLNEIPKYLRPETRSLIDSALERAWQELKEDSPADVALARRKLAGTIVALASVGETDPAKLTRFALHAAKGMRVSALGERKERRVCNNIR*
JGI11643J12802_113490072	3300000890	Soil	MPLNEIPYYLGPETRRLIDLALNEAWQELKNDLPADPSLARRKMAGTIVALTSVGETDPAKLKSFALKALRGVRVSTARDGI*
JGI11615J12901_101129662	3300000953	Soil	MPLNEIPYYLGPETRRLIDLALNEAWQELKNDLPADPSLARRKMAGTIVALTSVGETDPAKLKSFALNAL
JGI1027J12803_1028241941	3300000955	Soil	MPLNEIPSYLCPETRRLIDLALDEAWQELKNDLPADPSLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSAATTRDEDT
F14TB_1027191401	3300001431	Soil	MKLVPPLTGEPVMPFNEFPQHLRPETRRLIDSALEPTWQELKEDGPADVALARCKLAGTIVALASVGETDPAKLTRFALHAAKGMRVSALGERKERRVCNNIR*
JGI24749J21850_10754961	3300002076	Corn, Switchgrass And Miscanthus Rhizosphere	REDSTMPLNEIPSYLGPETRXLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSAATTRDEDTI*
C687J26616_100087405	3300002120	Soil	MPLNEIPNYINPETRRLIDSALEQAWQELKRDGPADVALARRKLAGTIVAFASVGETDPAKLKRFALHAARGARVTALGEGKERRVCNNVR*
C687J26616_100233035	3300002120	Soil	MPLNEIPKYFSRETRSLIDFALEQAWQELKKDAPADVALARRKLAGTIAALASVGETDPAKLKWFALHATRGRPQPQPQGSRGSQP*
JGI24742J22300_100896011	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	MPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRG
C687J35164_100142251	3300002503	Soil	MPLNEIPKYFSRETRSLIDFALEQAWQELKKDAPADVALARRKLAGTIAALASVGETDPAKLKWFALHATRGRPQPQPQGSRGSQ
Ga0063356_1006134553	3300004463	Arabidopsis Thaliana Rhizosphere	MPLNEIPKYISSETRSLIDSALEQAWQELKRDGPADIDLARRKLAGTIVALASVGETDPAKLKRFALHAARGMADSALGDLKGRRVCNTVR*
Ga0062595_1010057391	3300004479	Soil	MPLNEIPKYISSETRSLIDSALEQAWQELKRDGPADIDLARRKLAGTIVALASVGEIDPAKLKRFALHAARGMADSALGDLKGRRVCNTVR*
Ga0062595_1016951671	3300004479	Soil	IMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPSLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSAATTRDEDTI*
Ga0062592_1001693403	3300004480	Soil	MPLHEIPSYLGPETRRLIELALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLNFLLCMRSEELGVSRACDGT*
Ga0062591_1003762752	3300004643	Soil	MTGHDVVCVALSGNSIMPLNEIPYYLGPETRRLIDLALNEAWQELKNDLPADPSLARRKMAGTIVALTSVGETDPAKLKSFALKALRGVRVSTARDGI*
Ga0062594_1005700102	3300005093	Soil	MPLNEIPSYIGPETRRLIDLALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARRFKSV*
Ga0066388_1000856317	3300005332	Tropical Forest Soil	MPLNEIPKYISAETRSLIDSAPEQSWQELKRDGPADVALARRKLAGTIVALTSVGETDLAKLKRFALHAARGIRALGDRKGRGLCNHVR*
Ga0066388_1043017102	3300005332	Tropical Forest Soil	MTGHDVVCVAPQEDSIMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSTARDGI*
Ga0070666_101541283	3300005335	Switchgrass Rhizosphere	MPLNEIPSYLGPETRLLIDLALDEAWQELKNDLPADPTLARRKMAGTIVALTSVGVTDPAKLKSFALHALRGVRVSTARDGT*
Ga0068868_1003594923	3300005338	Miscanthus Rhizosphere	DSIMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGVRVSAATTRDEDTI*
Ga0070660_1000149707	3300005339	Corn Rhizosphere	MPLNEIPSYIGPETRRLIDLALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSRARDMI*
Ga0070660_1001060063	3300005339	Corn Rhizosphere	MTGHDVVCVAPREDSIMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGVRVSAATTRDEDTI*
Ga0070689_1003830733	3300005340	Switchgrass Rhizosphere	MPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGVRVSAATTRDEDTI*
Ga0070675_1005584581	3300005354	Miscanthus Rhizosphere	MPLNEIPSYIGPETRRLIDLALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGTRVSRA*
Ga0070671_1013157821	3300005355	Switchgrass Rhizosphere	DSIMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGVRVSAATTRDEDTIEK*
Ga0070673_1022205191	3300005364	Switchgrass Rhizosphere	MTGHDFVCVAPREDSIMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGVRVSAATTRDEDTI*
Ga0070659_1001890632	3300005366	Corn Rhizosphere	MLFVSPFRGDSIMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPSLARRKMAGTIVALTSVGETDPAKLKFFALHALRGVRVSAATTRDEDTI*
Ga0070703_100114833	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSAATTRDEDTI*
Ga0070701_101854722	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MTGHDVVCVAPREDSTMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSAATTRDEDTI*
Ga0070699_1011302071	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARRFKSV*
Ga0070679_1000605293	3300005530	Corn Rhizosphere	MPLNEIPSYLGPETRLLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSAATTRDEDTI*
Ga0070696_1004727941	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	PLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGVRVSAATTRDEDTI*
Ga0066903_1005736275	3300005764	Tropical Forest Soil	MPLNEIPKYISAETRSLIDSAPEQAWQELKRDGPADVALARRKLAGTIVALTSVGETDLAKLKRFALHAARGIRALGDRKGRGLCNHVR*
Ga0066903_1016968481	3300005764	Tropical Forest Soil	MPLNEIPSYLGPETRRLIERALDEAWQDLKNDLPADASLARRKMAGTIVALTSVGETDPAKLKFFALHALRG
Ga0066903_1052024761	3300005764	Tropical Forest Soil	VKRINFRHDGHCLCGPREDSIVPLNEIPSYLGPETRRLIELALDEAWQELKNDLPADALLARRKMAGTIVALTSVGESDPAKLKFFA
Ga0068851_103239502	3300005834	Corn Rhizosphere	MPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARRFKSV*
Ga0075417_105537141	3300006049	Populus Rhizosphere	MPLNEIPSYLGPETRRLIELALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARRFKSV*
Ga0079220_120912281	3300006806	Agricultural Soil	MTGHDASTPDGEAIMPLNEIPKYLRPETRSLIDSALEQAWHELKEDRPADVALARRKLAGTIVALASVGETDPAKLTRFALHATRGMRVGPLGRRKERRVCNNVR*
Ga0075428_1004696192	3300006844	Populus Rhizosphere	PREDSIMPLNEIPSYIGPETRRLIDLALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARRFKSV*
Ga0075433_100409792	3300006852	Populus Rhizosphere	MLFVWPSGRLNMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSAATTRDEDTI*
Ga0075433_111617621	3300006852	Populus Rhizosphere	MPLNEIPSYLGPETRRLIELALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSRARDMI*
Ga0075425_1012612832	3300006854	Populus Rhizosphere	MPLNEIPSYLGPETRLLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPEKLKFFALHALRGAAATTRDDDMI*
Ga0075434_1002647724	3300006871	Populus Rhizosphere	MTGTMLFVLAWEDSIIPLNEIPSYLGPETRRLIELALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSRARDMI*
Ga0075434_1008471112	3300006871	Populus Rhizosphere	MPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKSFALHALRGARVSTARDGI*
Ga0075426_108738351	3300006903	Populus Rhizosphere	MLFVWPSGRLNMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARRFKSV*
Ga0075424_1015754462	3300006904	Populus Rhizosphere	MPLNEIPSYLGPETRRLIELALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSSACDGI*
Ga0075419_105150061	3300006969	Populus Rhizosphere	MPLNEIPSYLGPETTRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKSFALHALRGARVSTARDGT*
Ga0111539_102186261	3300009094	Populus Rhizosphere	DGGTMLFVWPSGRLNMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSAATTRDEDTI*
Ga0114129_107287691	3300009147	Populus Rhizosphere	LYWPREDSIIPLNEIPSYLGPETRRLIELALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSRARDMI*
Ga0111538_101267814	3300009156	Populus Rhizosphere	MPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPSLARRKMAGTIVALTSVGETDPAKLKFFALHALRGAAATTRDDDTI*
Ga0075423_111443861	3300009162	Populus Rhizosphere	VPLNEIPSYLGPETRRLIELALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSRARDMI*
Ga0105100_103910901	3300009166	Freshwater Sediment	MPLNEIPKYLSAETRSLVDCALEQAWQELEKDLPADVALARRKLAGTIVALASVGETDPAKLKRFALQATRASRPQPSAVAASA*
Ga0105237_114712321	3300009545	Corn Rhizosphere	MPLNEIPAYLGPETRRLIDLALDEAWQELKNDFPADSSLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSAATTRDEDTI*
Ga0105249_115339431	3300009553	Switchgrass Rhizosphere	VVCVAPREDSTMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGAAATTRDDDTI*
Ga0126384_110512211	3300010046	Tropical Forest Soil	VKRINFRHDGHHVVCVALGKTQSVPLNEIPSYLGPETRRLIELALDEAWQELKNDLPADALLARRKMAGTIVALTSLGETDPAKLKFFALHAFRGARVSRARDGI*
Ga0126384_114650302	3300010046	Tropical Forest Soil	MTGHDACATPNGEAIMPLNEIPKYLHPETRSLIDSALEQAWHELKEDRPADVALARRKLAGTIVALASVGETDPAKLTRFVLHATRGMRVGALGRRKERRVCNNVR*
Ga0126376_101799254	3300010359	Tropical Forest Soil	MTGHDACATPNGEAIMPLNEIPKYLHPETRSLIDSALEQAWHELKEDRPADVALARRKLTGTIVALASVGETDPAKLTRFVLHATRGMRVGALGRRKERRVCNNVR*
Ga0126378_108873822	3300010361	Tropical Forest Soil	VPLNEIPSYLGPETRRLIELALDEAWQELKNDLPANALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSRAYDGI*
Ga0126379_116805082	3300010366	Tropical Forest Soil	VPLNEIPSYLGPETRRLIERALDEAWQELKNDVPANALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSRARDGI*
Ga0134128_104185611	3300010373	Terrestrial Soil	PREDSIMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGVRVSAATTRDEDTV*
Ga0105239_101595273	3300010375	Corn Rhizosphere	SYLGPETRRLIDLALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARRFKSV*
Ga0126381_1015899751	3300010376	Tropical Forest Soil	MTAPCCLCGPREDSIVPLNEIPSYLGPETRRLIELALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSRACDGI*
Ga0134122_100435071	3300010400	Terrestrial Soil	STMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSAATTRDEDTI*
Ga0157304_11126041	3300012882	Soil	LYWPREDSIIPLNEIPSYLGPETRRLIELALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGTRVSRA*
Ga0157305_101888981	3300012891	Soil	VAPREDSIMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSAAHDA*
Ga0157299_102679431	3300012899	Soil	MPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKSFALNALRGVRVSTARDGILSRRGVHH
Ga0157288_102026301	3300012901	Soil	MPLNEIPAYLGPETRRLIELALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSAATTRDEDTI*
Ga0157291_100830502	3300012902	Soil	MPLNEIPSYLGPETRRLIDLALDEAWQELKNDFPADSSLARRKMAGTIVALTSVGGADPAKLKFFALHALRGVRVSAATTRDEDTI*
Ga0157295_100377021	3300012906	Soil	MPLNEIPAYLGPETRRLIDLALDEAWQELKNDFPADSSLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSAA
Ga0157308_102606232	3300012910	Soil	MPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGAAATTRDDDTI*
Ga0126375_115113891	3300012948	Tropical Forest Soil	MTGHDACATPNGEAIMPLNEIPKYLHPETRSLIDSALEQAWHELKEDRPADVALARRKLAGTIVALASVGETDPAKLMRFALHAARGMRVGALGDHKEGLRNNVR*
Ga0164301_108280912	3300012960	Soil	MTGHDVVCVAPREDSIMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARRFKSV*
Ga0164302_101170662	3300012961	Soil	MPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGVRVSAARTRDEDTI*
Ga0157307_10287722	3300013096	Soil	MPLNEIPSYLGPETRRLIELALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLNFLLCMRSEELGVSRACDGT*
Ga0157307_10462562	3300013096	Soil	PLNEIPAYLGPETRRLIDLALDEAWQELKNDFPADSSLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSAATMRDEDTI*
Ga0157378_103986013	3300013297	Miscanthus Rhizosphere	MPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLEFFALHALRGARVSAATTRDEDTI*
Ga0163162_103974764	3300013306	Switchgrass Rhizosphere	DVVCVAPREDSTMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGVRVSAATTRDEDTI*
Ga0075325_10013092	3300014270	Natural And Restored Wetlands	MPLNEIPKYLSTQTRDLVDHALEHAWQELKEDAPADVDLARRKLAGTIVALASVGETDMAKLKFFALNAARAAQKQRSAPPGSTGSTS*
Ga0075326_12762392	3300014271	Natural And Restored Wetlands	MPLNEIPKHLRLETRRRIDSALEQAWQEDGPADVFLARRKLAGTSVALASVGETDPAKFKRFALHAARGMADKALGDRKVRRVGNNVR*
Ga0075327_12163352	3300014272	Natural And Restored Wetlands	MPLNEIPKYLSTKTRDLVDHALEHAWQELKEDAPADVDLARRKLAGTIVALASVGETDMAKLKFFALNAARAAQKQRSAPPGSTGSTS*
Ga0075342_10082503	3300014320	Natural And Restored Wetlands	VVPLNEIPKYIKPETRDLIESALEQAWQELKSDEPSDVDLARRKLAGTIVALTSVGETDPAKLKRFALHAARAMAHWALAGRQGRSRS*
Ga0157379_111817332	3300014968	Switchgrass Rhizosphere	MTGHDVVCVAPREDSIMPLNEIPSYLGPETRRLIDLALDEAWQEKKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFVFHALRGAAATTRDDDTI*
Ga0157376_115074122	3300014969	Miscanthus Rhizosphere	MPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPSLARRKMAGTIVALTSVGETDPAKLKFFALHALRGVRVSAATTRDEDTI*
Ga0173483_101223473	3300015077	Soil	APREDSIMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGVRVSAATTRDEDTI*
Ga0132256_1005519961	3300015372	Arabidopsis Rhizosphere	MPLNEIPSYIGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARRFKSV*
Ga0132257_1045253421	3300015373	Arabidopsis Rhizosphere	MPLNEIPSYIGPETRRLIDLALDEAWQELKNDLPADALLARRKMAGTIVALTSVGDTYPAKLKFFALHALRGARVSRACDGI*
Ga0182038_112409302	3300016445	Soil	VPLNEIPSYLGPETRRLIELALDEAWQELKNDLPANALLARRKMAGTIVVLTSVGETDPAKLKFFALHALRGARVSRARDG
Ga0163161_108438751	3300017792	Switchgrass Rhizosphere	MPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPSLARRKMAGTIVALTSVGETDPAKLKFFALHALRGVRVSAATTRDEDTI
Ga0173481_100503572	3300019356	Soil	MTGHDVVCVAPREDSIMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGVRVSAATTRDEDTI
Ga0173481_107547611	3300019356	Soil	APREDSIMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLNFLLCMRSEELGVSRACDGT
Ga0173482_100901372	3300019361	Soil	MTGHDVVCVAPREDSIMPLNEIPSYLGPETRRLIDLALDEAWQELKNDFPADSSLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSAATTRDEDTI
Ga0173482_102950772	3300019361	Soil	MPLNEIPSYIGPETRRLIDLALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARRFKSV
Ga0173482_103639892	3300019361	Soil	LYWPREDSIIPLNEIPSYLGPETRRLIELALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLNFLLCMRSE
Ga0187893_101062442	3300019487	Microbial Mat On Rocks	VPFNEIPKYFNPETRRLIDAALEQAWQELSKDEPVDDASARRALARRKLAGTIVALVSIGETDPAKLKRFALNAARAMYGGH
Ga0187893_101766853	3300019487	Microbial Mat On Rocks	MPLNEILNYLRPETRNLIDSVLEQAWQELKEDGPADVAVARRKLAGTIVALASVGETDPAKLKRFALHAARGMRVSALGDRKERRVCNNVR
Ga0126371_101834004	3300021560	Tropical Forest Soil	MTGHDACATPNGEAIMPLNEIPKYLHPETRSLIDSALEQAWHELKEDRPADVALARRKLAGTIVALASVGETDPAKLTRFVLHATRGMRVGALGRRKERRVCNNVR
Ga0126371_130671192	3300021560	Tropical Forest Soil	VPLNEIPSYLGPETRRLIELALDEAWQELKNDLPADALLARRKMAGTIVALTSVGESDPAKLKFFALHALRGARVSRACDGI
Ga0247802_10477061	3300023077	Soil	MTGHDVVCVAPREDSIMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGAAATTRDDDTI
Ga0209619_103375252	3300025159	Soil	MPLNEIPNYINPETRRLIDSALEQAWQELKRDGPADVALARRKLAGTIVAFASVGETDPAKLKRFALHAARGARVTALGEGKERRVCNNVR
Ga0209109_100218056	3300025160	Soil	MPLNEIPKYFSRETRSLIDFALEQAWQELKKDAPADVALARRKLAGTIAALASVGETDPAKLKWFALHATRGRPQPQPQGSRGSQP
Ga0209519_101197113	3300025318	Soil	MPLNEIPNYINPETRRLIDSALEQAWQELKRDGPADVALARRKLAGTIVAFASVGETDPAKLKRFALHAARGARVTALGEGK
Ga0209342_107182672	3300025326	Soil	MPLNEIPKYFSRETRSLIDFALEQAWQELKKDAPADVALARRKLAGTIAALASVGETDPAKLKWFALHATRGRPQPQPQGSR
Ga0207642_101271132	3300025899	Miscanthus Rhizosphere	MPLNEIPSYIGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSAATTRDEDTI
Ga0207645_102563501	3300025907	Miscanthus Rhizosphere	MPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARRFKSV
Ga0207654_101059841	3300025911	Corn Rhizosphere	MPLNEIPSYIGPETRRLIDLALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGA
Ga0207663_102214673	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	PREDSIMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGVRVSAATTRDEDTI
Ga0207662_104673422	3300025918	Switchgrass Rhizosphere	MPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHA
Ga0207657_100109971	3300025919	Corn Rhizosphere	MPLNEIPSYIGPETRRLIDLALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSRARDGI
Ga0207652_100616183	3300025921	Corn Rhizosphere	MPLNEIPSYLGPETRLLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHPLRGARVSAATTRDEDTI
Ga0207659_103408591	3300025926	Miscanthus Rhizosphere	MPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPSLARRKMAGTIVALTSVGETDPAKLKFFALHALRGAAATTRDDDTI
Ga0207670_106871082	3300025936	Switchgrass Rhizosphere	VVCVAPREDSIMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGVRVSAATTRDEDTI
Ga0207704_101050652	3300025938	Miscanthus Rhizosphere	MPLNEIPSYIGPETRRLIDLALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGTRVSRA
Ga0207689_117534132	3300025942	Miscanthus Rhizosphere	MLFVSPFRGDSIMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPSLARRKMAGTIVALTSVGETDPAKLKFFALHALRGAAATTRDDDTI
Ga0207651_108819802	3300025960	Switchgrass Rhizosphere	MTGHDFVCVAPREDSIMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGVRVSAATTRDEDTI
Ga0207668_115829891	3300025972	Switchgrass Rhizosphere	SYLGPETRLLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSAATTRDEDTI
Ga0207703_116275991	3300026035	Switchgrass Rhizosphere	MTGHDVVCVAPREDSTMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSAATTRDEDTI
Ga0256867_101165191	3300026535	Soil	LNEIPEYLRPETRSLIDSALEQACQELKEDGPADVALARHKLAGTIVALASVGETDPAKLKRFALHAARGMHVSTLGDGKGRRVRNNVR
Ga0209843_10581501	3300027511	Groundwater Sand	MPLNEIPKYFSRETRSLIDFALEQAWQELKKDAPVDVALARRKLAGTIAALASVGETDPAKLKWFALHATRGRPQPQPQGSRGSQP
Ga0207428_107555911	3300027907	Populus Rhizosphere	MPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHAL
Ga0207428_108916102	3300027907	Populus Rhizosphere	MPLNEIPSYLGPETRRLIELALDEAWQELKNDLPADALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARRFKSV
Ga0268266_110045261	3300028379	Switchgrass Rhizosphere	MPLNEIPSYIGPETRRLIDLALDEAWQELKNDLPTDALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARRFKSV
Ga0299907_101454395	3300030006	Soil	MPLNEIPEYLRPETRSLIDSALEQAWQELKEDGPADVALARHKLAGTIVALASVGETDPAKLKRFALHAARGMRVSTLGDGKGRRVRNNVR
Ga0268386_100405315	3300030619	Soil	MPLNEIPEYLRPETRSLIDSALEQACQELKEDGPADVALARHKLAGTIVALASVGETDPAKLKRFALHAARGMHVSTLGDGKGRRVRNNVR
Ga0299913_113531192	3300031229	Soil	MPLNEIPKHLRPETRRRIDSALEQAWQELEEDGPADVFLARRKLAGTSVALASVGETDPAKFKRFALHAARGMADKALGDRKVRRVGNNVR
Ga0310888_107798131	3300031538	Soil	VAPREDSTLPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARRFKSV
Ga0318541_104310361	3300031545	Soil	VPLNEIPSYLGPETRRLIELALDEAWQELKNDLPANALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSRARDGI
Ga0310886_101052823	3300031562	Soil	GHDVVCVAPREDSTMPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSAATTRDEDTI
Ga0310915_101511773	3300031573	Soil	LNEIPSYLGPETRRLIELALDEAWQELKNDLPANALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSRARDGI
Ga0315537_12324871	3300031698	Salt Marsh Sediment	MPLNEIPKYINPEARSLIDSALEQAWQEFESDGPDDVALARRKLAGTIVALVSVGETDPAKLKRFALHAARGITHSVSKSGRNIS
Ga0307469_114305012	3300031720	Hardwood Forest Soil	IPSSRGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSAATTRDEDTI
Ga0306918_104051321	3300031744	Soil	RAPCCLCGPREDSIVPLNEIPSYLGPETRRLIELALDEAWQELKNDLPANALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSRARDGI
Ga0310891_100290632	3300031913	Soil	MPLNEIPSYLGPETRLLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARRFKSV
Ga0310916_107802091	3300031942	Soil	MPLNEIPTYLGPETRRLIELALDEAWQELKNDLPANALLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSRARDGI
Ga0315540_103657452	3300032061	Salt Marsh Sediment	VPLNEIPKYIHPETCDLIESALEQAWQELKSDEPPDVALARRKLAGTIVALTSVGETDPTKLKRFALHAARAMAHRALAGRQGRSRS
Ga0310889_100213691	3300032179	Soil	MPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPTDPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSAATTRDEDTI
Ga0307472_1020043131	3300032205	Hardwood Forest Soil	MPLNEIPSYLGPETRRLIDLALDEAWQELKNDLPADPLLARRKMAGTIVALTSVGETDPAKLKFFALHALRGARVSRARDGI
Ga0214472_100282131	3300033407	Soil	EIPNYIKTRRLIDSALEQAWQELKRDGPADVALARRKLAGTIVAFASVGETDPAKLKRFALHAARGARVTALGEGKERRVCNNVR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F054428

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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