Metagenome Family F054701

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054701
Family Type	Metagenome
Number of Sequences	139
Average Sequence Length	82 residues
Representative Sequence	TGLPCAVMGTPSLDSAGVLAAGTYICPTGNTPGAYLINAATGAILKTLPVGSSRVFGQPVFAQGTLFVATETKGLYNFAP
Number of Associated Samples	116
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.44 %
% of genes near scaffold ends (potentially truncated)	94.96 %
% of genes from short scaffolds (< 2000 bps)	89.21 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.432 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (45.324 % of family members)
Environment Ontology (ENVO)	Unclassified (54.676 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (46.043 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 42.59% Coil/Unstructured: 57.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF02518	HATPase_c	13.67
PF05345	He_PIG	6.47
PF13360	PQQ_2	4.32
PF00582	Usp	1.44
PF07992	Pyr_redox_2	1.44
PF01872	RibD_C	1.44
PF03006	HlyIII	1.44
PF00501	AMP-binding	0.72
PF13458	Peripla_BP_6	0.72
PF14464	Prok-JAB	0.72
PF03551	PadR	0.72
PF00583	Acetyltransf_1	0.72
PF08281	Sigma70_r4_2	0.72
PF12680	SnoaL_2	0.72
PF01019	G_glu_transpept	0.72
PF01641	SelR	0.72
PF04542	Sigma70_r2	0.72
PF06071	YchF-GTPase_C	0.72
PF13570	PQQ_3	0.72
PF00486	Trans_reg_C	0.72
PF00230	MIP	0.72
PF01638	HxlR	0.72
PF13413	HTH_25	0.72
PF03070	TENA_THI-4	0.72
PF13683	rve_3	0.72
PF12698	ABC2_membrane_3	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.44
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	1.44
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.44
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.44
COG0012	Ribosome-binding ATPase YchF, GTP1/OBG family	Translation, ribosomal structure and biogenesis [J]	0.72
COG0229	Peptide methionine sulfoxide reductase MsrB	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	0.72
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.72
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.72
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.72
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.72
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.72
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.72
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.43 %
Unclassified	root	N/A	39.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.43 %
Unclassified	root	N/A	39.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.43 %
Unclassified	root	N/A	39.57 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	54.68 %
Unclassified	root	N/A	39.57 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	48.92 %
Unclassified	root	N/A	39.57 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.57 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	29.50 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.72 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.72 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.57 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	8.63 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.88 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.44 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.72 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.72 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.72 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.57 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	8.63 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.88 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.72 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.72 %
Reticulibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae	0.72 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.72 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.57 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	5.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.88 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.72 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.72 %
Reticulibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter	0.72 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.72 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.57 %
Geodermatophilaceae bacterium URHB0062	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	5.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.88 %
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	0.72 %
Nocardioides speluncae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides speluncae	0.72 %
Reticulibacter mediterranei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	0.72 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.72 %
Pseudonocardia acaciae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia acaciae	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.57 %
Geodermatophilaceae bacterium URHB0062	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	5.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.88 %
Mycobacterium sp. IWGMT90018-18076	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. IWGMT90018-18076	0.72 %
Nocardioides speluncae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides speluncae	0.72 %
Reticulibacter mediterranei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	0.72 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.72 %
Pseudonocardia acaciae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia acaciae	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10974463	Not Available	516	Open in IMG/M
3300005179\|Ga0066684_10256110	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1150	Open in IMG/M
3300005332\|Ga0066388_102768919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	895	Open in IMG/M
3300005332\|Ga0066388_103141240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	844	Open in IMG/M
3300005435\|Ga0070714_102297822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	524	Open in IMG/M
3300005436\|Ga0070713_102256752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	527	Open in IMG/M
3300005437\|Ga0070710_10022269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3311	Open in IMG/M
3300005445\|Ga0070708_101219304	Not Available	704	Open in IMG/M
3300005458\|Ga0070681_11306470	Not Available	648	Open in IMG/M
3300005471\|Ga0070698_100393700	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300005541\|Ga0070733_10641441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	712	Open in IMG/M
3300005549\|Ga0070704_101466360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	627	Open in IMG/M
3300005564\|Ga0070664_102029992	Not Available	546	Open in IMG/M
3300005614\|Ga0068856_100053215	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3991	Open in IMG/M
3300005764\|Ga0066903_101719040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1195	Open in IMG/M
3300005952\|Ga0080026_10192005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	603	Open in IMG/M
3300006031\|Ga0066651_10263198	All Organisms → cellular organisms → Bacteria → Terrabacteria group	915	Open in IMG/M
3300006046\|Ga0066652_101926848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	529	Open in IMG/M
3300006797\|Ga0066659_10079960	All Organisms → cellular organisms → Bacteria	2166	Open in IMG/M
3300006800\|Ga0066660_11248561	All Organisms → cellular organisms → Bacteria → Terrabacteria group	582	Open in IMG/M
3300006893\|Ga0073928_10782546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	660	Open in IMG/M
3300006903\|Ga0075426_10785862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	716	Open in IMG/M
3300006904\|Ga0075424_102595246	Not Available	530	Open in IMG/M
3300006914\|Ga0075436_101188054	Not Available	576	Open in IMG/M
3300010047\|Ga0126382_10528492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia acaciae	955	Open in IMG/M
3300010047\|Ga0126382_10610380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	899	Open in IMG/M
3300010048\|Ga0126373_10166130	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2112	Open in IMG/M
3300010048\|Ga0126373_10701506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1070	Open in IMG/M
3300010337\|Ga0134062_10399372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	672	Open in IMG/M
3300010360\|Ga0126372_12161662	Not Available	605	Open in IMG/M
3300010361\|Ga0126378_10738633	Not Available	1095	Open in IMG/M
3300010361\|Ga0126378_11075770	Not Available	906	Open in IMG/M
3300010366\|Ga0126379_12429277	Not Available	623	Open in IMG/M
3300010376\|Ga0126381_103313285	Not Available	635	Open in IMG/M
3300010396\|Ga0134126_12711916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300010398\|Ga0126383_10905208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	969	Open in IMG/M
3300010398\|Ga0126383_12841286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	566	Open in IMG/M
3300011271\|Ga0137393_10041559	All Organisms → cellular organisms → Bacteria	3551	Open in IMG/M
3300012198\|Ga0137364_10740524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	742	Open in IMG/M
3300012206\|Ga0137380_10612911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	951	Open in IMG/M
3300012207\|Ga0137381_10277421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1458	Open in IMG/M
3300012209\|Ga0137379_10587541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1021	Open in IMG/M
3300012211\|Ga0137377_11467505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	609	Open in IMG/M
3300012349\|Ga0137387_10516048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	867	Open in IMG/M
3300012354\|Ga0137366_11062399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	559	Open in IMG/M
3300012917\|Ga0137395_10618639	Not Available	783	Open in IMG/M
3300014325\|Ga0163163_10889105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	954	Open in IMG/M
3300014501\|Ga0182024_10210551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2646	Open in IMG/M
3300015373\|Ga0132257_102424219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	681	Open in IMG/M
3300016270\|Ga0182036_10194692	Not Available	1481	Open in IMG/M
3300016294\|Ga0182041_11448638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	631	Open in IMG/M
3300016319\|Ga0182033_10467961	Not Available	1078	Open in IMG/M
3300016319\|Ga0182033_11830715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	551	Open in IMG/M
3300016387\|Ga0182040_10205232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1452	Open in IMG/M
3300016404\|Ga0182037_11511581	Not Available	596	Open in IMG/M
3300016445\|Ga0182038_10538940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1001	Open in IMG/M
3300016445\|Ga0182038_11523817	Not Available	600	Open in IMG/M
3300016445\|Ga0182038_12020184	Not Available	522	Open in IMG/M
3300018001\|Ga0187815_10252687	Not Available	746	Open in IMG/M
3300021086\|Ga0179596_10438388	Not Available	661	Open in IMG/M
3300021358\|Ga0213873_10271840	Not Available	541	Open in IMG/M
3300021362\|Ga0213882_10004707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4716	Open in IMG/M
3300021560\|Ga0126371_10793443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1093	Open in IMG/M
3300021560\|Ga0126371_11115660	Not Available	927	Open in IMG/M
3300021560\|Ga0126371_12416049	Not Available	636	Open in IMG/M
3300025912\|Ga0207707_11003284	Not Available	685	Open in IMG/M
3300025928\|Ga0207700_11142671	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	696	Open in IMG/M
3300025929\|Ga0207664_11675854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	558	Open in IMG/M
3300027775\|Ga0209177_10479155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	515	Open in IMG/M
3300027874\|Ga0209465_10446245	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300027875\|Ga0209283_10158642	All Organisms → cellular organisms → Bacteria	1501	Open in IMG/M
3300031474\|Ga0170818_100659394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. IWGMT90018-18076	1060	Open in IMG/M
3300031544\|Ga0318534_10574492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	641	Open in IMG/M
3300031544\|Ga0318534_10616982	Not Available	616	Open in IMG/M
3300031546\|Ga0318538_10380301	Not Available	763	Open in IMG/M
3300031546\|Ga0318538_10576579	Not Available	610	Open in IMG/M
3300031549\|Ga0318571_10385504	Not Available	544	Open in IMG/M
3300031564\|Ga0318573_10055418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1947	Open in IMG/M
3300031564\|Ga0318573_10183969	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300031572\|Ga0318515_10668565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	550	Open in IMG/M
3300031668\|Ga0318542_10446348	Not Available	670	Open in IMG/M
3300031679\|Ga0318561_10376434	Not Available	779	Open in IMG/M
3300031679\|Ga0318561_10586268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	614	Open in IMG/M
3300031680\|Ga0318574_10069345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1900	Open in IMG/M
3300031680\|Ga0318574_10815180	Not Available	547	Open in IMG/M
3300031681\|Ga0318572_10166229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	1279	Open in IMG/M
3300031682\|Ga0318560_10195658	Not Available	1079	Open in IMG/M
3300031719\|Ga0306917_11595100	Not Available	501	Open in IMG/M
3300031723\|Ga0318493_10161279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1166	Open in IMG/M
3300031723\|Ga0318493_10325982	Not Available	832	Open in IMG/M
3300031723\|Ga0318493_10826841	Not Available	522	Open in IMG/M
3300031724\|Ga0318500_10044742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1853	Open in IMG/M
3300031747\|Ga0318502_10227875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1083	Open in IMG/M
3300031765\|Ga0318554_10010241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4638	Open in IMG/M
3300031765\|Ga0318554_10274205	Not Available	960	Open in IMG/M
3300031770\|Ga0318521_10020365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3087	Open in IMG/M
3300031771\|Ga0318546_10645766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	744	Open in IMG/M
3300031777\|Ga0318543_10453941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	574	Open in IMG/M
3300031778\|Ga0318498_10294173	Not Available	729	Open in IMG/M
3300031779\|Ga0318566_10582466	Not Available	545	Open in IMG/M
3300031780\|Ga0318508_1080705	All Organisms → cellular organisms → Bacteria → Terrabacteria group	890	Open in IMG/M
3300031781\|Ga0318547_10673821	Not Available	642	Open in IMG/M
3300031782\|Ga0318552_10006520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4657	Open in IMG/M
3300031793\|Ga0318548_10184615	Not Available	1022	Open in IMG/M
3300031794\|Ga0318503_10302606	Not Available	519	Open in IMG/M
3300031795\|Ga0318557_10502985	Not Available	557	Open in IMG/M
3300031796\|Ga0318576_10451726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	607	Open in IMG/M
3300031797\|Ga0318550_10026425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2464	Open in IMG/M
3300031798\|Ga0318523_10526059	Not Available	584	Open in IMG/M
3300031799\|Ga0318565_10154688	Not Available	1112	Open in IMG/M
3300031819\|Ga0318568_10314531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	973	Open in IMG/M
3300031821\|Ga0318567_10642889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	602	Open in IMG/M
3300031821\|Ga0318567_10669180	Not Available	589	Open in IMG/M
3300031832\|Ga0318499_10169326	Not Available	852	Open in IMG/M
3300031846\|Ga0318512_10694657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	521	Open in IMG/M
3300031860\|Ga0318495_10016150	Not Available	3151	Open in IMG/M
3300031893\|Ga0318536_10156437	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300031896\|Ga0318551_10466137	Not Available	722	Open in IMG/M
3300031910\|Ga0306923_11382963	Not Available	742	Open in IMG/M
3300031945\|Ga0310913_10534726	Not Available	832	Open in IMG/M
3300031946\|Ga0310910_10783777	Not Available	751	Open in IMG/M
3300031947\|Ga0310909_10669758	Not Available	864	Open in IMG/M
3300031954\|Ga0306926_10433076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1621	Open in IMG/M
3300032009\|Ga0318563_10049945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2142	Open in IMG/M
3300032010\|Ga0318569_10524987	Not Available	551	Open in IMG/M
3300032041\|Ga0318549_10112660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1194	Open in IMG/M
3300032043\|Ga0318556_10531627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	614	Open in IMG/M
3300032054\|Ga0318570_10348258	Not Available	674	Open in IMG/M
3300032060\|Ga0318505_10097410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1328	Open in IMG/M
3300032060\|Ga0318505_10304667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides speluncae	752	Open in IMG/M
3300032060\|Ga0318505_10415488	All Organisms → cellular organisms → Bacteria → Terrabacteria group	636	Open in IMG/M
3300032065\|Ga0318513_10101685	Not Available	1345	Open in IMG/M
3300032068\|Ga0318553_10527914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	618	Open in IMG/M
3300032091\|Ga0318577_10347282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	709	Open in IMG/M
3300032261\|Ga0306920_100400548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	2041	Open in IMG/M
3300033289\|Ga0310914_10558602	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300033290\|Ga0318519_10041644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2245	Open in IMG/M
3300033290\|Ga0318519_10235941	Not Available	1054	Open in IMG/M
3300033290\|Ga0318519_10314551	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium URHB0062	919	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.24%
Host-Associated	Host-Associated	5.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.81%
Plants	Host-Associated → Plants	5.76%
Aquatic	Environmental → Aquatic	1.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.44%
Freshwater	Environmental → Aquatic → Freshwater	0.72%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.72%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.72%
Roots	Host-Associated → Plants → Roots	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.86%
Loam	Environmental → Terrestrial → Soil → Loam	10.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.44%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.72%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.72%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.72%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	55.40%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.14%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.44%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.72%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.72%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	45.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.35%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.16%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.44%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.72%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.72%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.72%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_109744632	3300004633	Tropical Forest Soil	AGVLAAGTYSCPISQAPGAYLINASTGAILKTLPTGPSRVFAQPIFAQGTLFVATEKSGLYDFAP*
Ga0066684_102561103	3300005179	Soil	SYGGSVRQVNPATGGYIWQAGLPCAVMGTPSLDSAGVLAAGTYNCPAGSTPGAYLINAATGAILKTLPAGGSRVFSQPVFAQGTLFVATETQGLYNFAP*
Ga0066388_1027689192	3300005332	Tropical Forest Soil	MGQTGLPCAVMGTPPLDGAGVPAGGTHSCPAGTCPGAYLINAATRAILNTLPIGGSRVVSQPVLAQGTLFV
Ga0066388_1031412402	3300005332	Tropical Forest Soil	GYLWQTGLPCGVIGTPTLDSAGVLAVGTYNCTAPNTPGGYLINASTGAILTALPVGSARIFSQPVFAQGNLVVATETNGLYDFAP*
Ga0070714_1022978222	3300005435	Agricultural Soil	LDSAGVLAAGTYLCPAGSTPGAYLLNAATGAILKALPVGGSRVFSQPVFAQGSLFIATETRGLYNFTP*
Ga0070713_1022567521	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	ATSYGGSIRQVNPTTGSFIWQTGLPCAVMGTPTLDSAGVLAAGTYSCPKSGAPGAYLINASTGAILTTLPVGSSRVFGQPVFAQGTLFVATETHGLYDFAP*
Ga0070710_100222691	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	AVMGTPSLDSAGVLAAGTYLCPTGNTPGAYLINATTGAILKSLPVGSGRVFSQPVFAQGALFVATESNGLYDFAS*
Ga0070708_1012193042	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SLDSAGVLAAGTYICPAGNTPGAYLINAATGAILKTLPVGSSRVFGQPVFAQGTLFVATETKGLYNFAP*
Ga0070681_113064701	3300005458	Corn Rhizosphere	LDSAGVLAAGTYICPAGNTPGAYLINAATGAILKTLPVGSSRVFGQPVFAQGTLFVATETKGLYNFAP*
Ga0070698_1003937003	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VLALGTYSCPASGTPGAYLINASTGAILTTLPTGPSRVFAQPIFAQGTLFVATETSGLYDFAP*
Ga0070733_106414413	3300005541	Surface Soil	GVLAVATWDCTSPNTPGAYLMDAATGAILTTLPTKGRIFSQPVFAQGTLFVASQTGGLYDFAPGP*
Ga0070704_1014663601	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	TTIGATSYGGSIRQVNPTTGAFIWQTGLPCAVMGTPTLDSAGVLALGTYSCPASGTPGAYLINASTGAILTTLPTGPSRVFAQPIFAQGTLFVATETSGLYDFAP*
Ga0070664_1020299921	3300005564	Corn Rhizosphere	AAGTYLCPAGSAPGAYLLNAATGAILKTLPVGGSRVFSQPVFAQGTLFVATETRGLYNFTP*
Ga0068856_1000532156	3300005614	Corn Rhizosphere	GLPCAVMGTPSLDSAGVLAAGTYLCPTGNTPGAYLINATTGAILKSLPVGSGRVFSQPVFAQGALFVATESNGLYDFAS*
Ga0066903_1017190401	3300005764	Tropical Forest Soil	DPATGAFIWESGLPCAEVGTPSLDSAGVLAVGTWSCTQPNTPGAYLLDAATGTILTTLPTGTSRVFSQPVFAQGTLFVATQTKGLYNFAPGPVLQGLPARAS*
Ga0080026_101920051	3300005952	Permafrost Soil	SVRQLNPVTGAFIWQTGLPCAVMGTPTLDSAGVLAAGTYSCVRPKTPGAYLINASTGAILKTLPVASGRVFGQPVFAQGTLFVATESRGLYNFAP*
Ga0066651_102631982	3300006031	Soil	RQVNPATGGYIWQTGLPCAVMGTPSLDSAGVLAAGTYLCPAGSTPGAYLINAATGAILKALPVGGSRVFSQPVFAQGTLFVATETQGLYNFAP*
Ga0066652_1019268482	3300006046	Soil	MGTPALDSAGVLAAGTYTCTAGNTPGAYLIDAATGALLKTLPVGSSRVFGQPVFAQNGLFVATETNGLYNFAPK*
Ga0066659_100799602	3300006797	Soil	MGTPSLDSAGVLAAGTYLCPAGSTPGAYLINAATGAILKALPVGGSRVFSQPVFAQGTLFVATETQGLYNFAP*
Ga0066660_112485611	3300006800	Soil	SLDSAGVLAAGTYLCPAGSTPGAYLINAATGAILKALPVGGSRVFSQPVFAQGTLFVATETQGLYNFAP*
Ga0073928_107825461	3300006893	Iron-Sulfur Acid Spring	GTGREVDPATGAFSWQTGLPCAEVGTPSLDSAGVLAVATWSCTQPNTPGAYLLDAATGAILTTLPTGKSRIFSQPVFAQGTLFVATQTGGLFDFAP*
Ga0075426_107858622	3300006903	Populus Rhizosphere	CAVMGTPSLDSAGVLAAGTYNCPAGSTPGAYLINAATGAILKTLPVGGSRVFGQPVFAQGTLFVATETQGLYNFAP*
Ga0075424_1025952461	3300006904	Populus Rhizosphere	TSYGGSVGQVNPATGAYIWQTGLPCAVMGTPSLDSAGVLAAGTYNCTSPNTPGAYLINAATGAILKTLPIGPSRVFSQPIFAQGTLFVATETQGLYNFAP*
Ga0075436_1011880541	3300006914	Populus Rhizosphere	VRQVNPVTGAYIWQVGLPCAVMGTPSLDSAGVLAAGTYNCPAGSTPGAYLINAATGAILKTLPVGGSRVFGQPVFAQGTLFVATETQGLYNFAP*
Ga0126382_105284921	3300010047	Tropical Forest Soil	AGTPTLDNAGVLAVGTFRCVAPNTPTAYLINAATGAILTTLPVGSTKVFGQPVFAQGTLFVATETNGLYDFAP*
Ga0126382_106103802	3300010047	Tropical Forest Soil	YGGSLRQVNPATGGYIWQTGLPCAVMGTPSLDSAGVLAAGTYRCPTGNTPGAYLLDATTGAILTALPVGSTRVFGQPVFAQGTLFAATETQGLFNFAP*
Ga0126373_101661301	3300010048	Tropical Forest Soil	IWQTGLPCTVAGTPTLDNAGVLAVGTFRCVAPNTPTAYLINAATGAILTTLPVGSTKVFGQPVFAQGTLFVATETNGLYDFAP*
Ga0126373_107015062	3300010048	Tropical Forest Soil	LDSAGVLAVGTYSCATPNIPGAYLINAATGAILKVLLAGASRLFSQPVFAQGTLFVATETHGLYDFAP*
Ga0134062_103993721	3300010337	Grasslands Soil	TGLPCAVMGTPSLDSAGVLAAGTYICPTGNTPGAYLINAATGAILKTLPVGSSRVFGQPVFAQGTLFVATETKGLYNFAP*
Ga0126372_121616622	3300010360	Tropical Forest Soil	GAFIWQTGLPCAVMGTPTLDSAGVLAAGTYSCPISQAPGAYLINASTGAILKTLPTGPSRVFAQPIFAQGTLFVATEKSGLYDFAP*
Ga0126378_107386332	3300010361	Tropical Forest Soil	VLAVGTYICPAGTTPGAYLINAATGAILKTLPVGSGSVFSQPVFAQGTLFVATDTKGLYNFAP*
Ga0126378_110757701	3300010361	Tropical Forest Soil	MCLAGSLWSGSAGTHSCPAGTCPGAYLINAATGAILTTLPIGGSRVFSQPVLAQGTLFVATETQGLHNFAP*
Ga0126379_124292771	3300010366	Tropical Forest Soil	WQTGLPCAVMGTPTLDSAGVLALGTYTCPKSGTPGAYLINASTGAILKTLPTGPSRVFAQPIFAQGTLFVATEKSGLYDFAP*
Ga0126381_1033132851	3300010376	Tropical Forest Soil	GVLAVGTFRCVAPNTPTAYLINAATGAILTTLPVGSTKVFGQPVFAQGTLFVATETNGLYDFAP*
Ga0134126_127119161	3300010396	Terrestrial Soil	VLAAGTYLCPAGNTPGAYLINAATGAILKTLPVGSDPVFGQPVFAQGTLFVATATQGLFNFAP*
Ga0126383_109052081	3300010398	Tropical Forest Soil	VGTPSLDSAGVLAVGTWSCTPPNTPGAYLLDAATGAILTTLPTGTSRVFSQPVFAQGTLFVATQTKGLYNFAPGPVLQGLPARAS*
Ga0126383_128412861	3300010398	Tropical Forest Soil	VSQVDPSTGHFIWRTGLPCAVMGSPSLDSAGVLAAGTYSGCLAPGMPGAYLLDAGTGAMLKALPVGTTKVFGQPVFAEGSLFVATESKGLYDFVP*
Ga0137393_100415591	3300011271	Vadose Zone Soil	SFGGSIRQVNPATGAFIWQTGLPCAVMGTPTLDSAGVLAAGTYTCPGTATPGAYLINASTGAKLKTLPVGSSRVFGQPVFAQGTLFVATETRGLYDFAP*
Ga0137364_107405241	3300012198	Vadose Zone Soil	NPATGSYLWQTGLPCGVTGTPTLDSAGVLAVGTYTCTAPNAPGAYLINATTGAILTALPVGSSHIFSQPVFAQGALFIATETNGLYDFVP*
Ga0137380_106129112	3300012206	Vadose Zone Soil	PSLDSAGVLAAGTYICPAGNTPGAYLIKAATGAILKTLPVGSSRVFGQPVFAQGTLFVATETKGLYNFAP*
Ga0137381_102774211	3300012207	Vadose Zone Soil	LDSAGVLAAGTYICPTGNTPGAYLINAATGAILKTLPVGSSRVFGQPVFAQGTLFVATETKGLYNFAP*
Ga0137379_105875412	3300012209	Vadose Zone Soil	QTGAFIWQAGLPCAVMGTPSLDSAGVLAAGTYSCPGTQTPGAYLINASTGARLKTLPVGSGRVFGQPVFAQGTLFVATETHGLYDFAP*
Ga0137377_114675052	3300012211	Vadose Zone Soil	LDSAGVLAAGTYSCAQPNTPGAYLIDAATGAILKTLPVGSGRVFSQPVFAQGTLFVATEAHGLFDFAP*
Ga0137387_105160482	3300012349	Vadose Zone Soil	WQTGLPCAVMGTPSLDSAGVLAAGTYICPTGNTPGAYLINAATGAILKTLPVGSSRVFGQPVFAQGTLFVATETKGLYNFAP*
Ga0137366_110623991	3300012354	Vadose Zone Soil	VRQVSPGTGAVRWQTGLPCAVMGTPTLDSAGVLAAGTYSCAQPNTPGAYLINASTGAILKTLPVGSGRVFGQPVFAQGSLFVATEAHGLYDFAP*
Ga0137395_106186392	3300012917	Vadose Zone Soil	GAFIWQTGLPCAVMGTPTLDSAGVLAAGTYTCPGTATPGAYLINASTGAILSTLPTGASRVFAQPIFAQGTLFVATETSGLYDFAP*
Ga0163163_108891052	3300014325	Switchgrass Rhizosphere	AGVLAAGTYLCPTGNTPGAYLINATTGAILKSLPVGSGRVFSQPVFAQGALFVATESNGLYDFAS*
Ga0182024_102105515	3300014501	Permafrost	AFSWQTGLPCAVMGTPTLDSAGVLAAGTYSCVKPKTPGAYLINASTGAILKTLPVASGRVFGQPVFAQGTLFVATESHGLYNFAP*
Ga0132257_1024242192	3300015373	Arabidopsis Rhizosphere	WQTGLPCAVMGTPSLDSAGVLAAGTYNCTSPNTPGAYLINAATGAILKTLPIGPSRVFSQPIFAQGTLFVATETQGLYNFAP*
Ga0182036_101946922	3300016270	Soil	LPCSVEGTPTLDSAGVLGVGTYSCPKPATPDAYLINASTGAILKSLSVGSTKLFGQLVFAQGTLFVATATNGLYDFAP
Ga0182041_114486381	3300016294	Soil	DPATGVFIWRTGLPCTVEGTPSLDSAGVLAVGTYSPGPCGTGAYLVNAATGAILTTLPVGTSKVFSQPVFAQATLFVATETNGVYNFAP
Ga0182033_104679612	3300016319	Soil	DLWQTGLPCSDAGTPSLDSAGVLAVATWGCTAPNTPGAYLLDAATGAILTTLPMGKSRIFSQPVFAQGTLFVATQAGGLYDFAP
Ga0182033_118307151	3300016319	Soil	QELNPATGHLIWQRNLPCAVMGTPSLDSAGVIAAGTYNCLTSTLTPGAYLLNAGTGAILKTLPVGSSKVFGQPVFAEGSLFVATESGGLFSFVP
Ga0182040_102052321	3300016387	Soil	GSIDEVNPATGAYLWRTGLPCTVVGTPALDAAGVLAAGTFYRCHTTSDAYLINAATGAILTTLPVGSTRIFSQPVFAQAALFVATETHGLYDFTP
Ga0182037_115115811	3300016404	Soil	AGTYNCFKPPPPGFTPGAYLLKASTGAMLKTLPVSSSKVFGQPVFAEGSLFVATESGGLYDFVP
Ga0182038_105389402	3300016445	Soil	GTPSLDSAGVIAAGTYNCLTSTLKPGAYLLNAGTGAILNTLPVGSGKVFGQPVFAEGSLFVATESGGLFRFVP
Ga0182038_115238171	3300016445	Soil	TGAYIWRTGLPCAVVGTPALDSAGVLAVGTFYRCHSTSDAYLLDAATGSVLTTLPVGSTRVFGQPVFAQGALFVATETNGLYDFVP
Ga0182038_120201841	3300016445	Soil	PCPVEGTPSLDSAGVLAVGTYSPGTCGTGAYLVNAATGAILTTLPVGTTKVFSQPVFAQGTLFVATETGGLYNFAP
Ga0187815_102526872	3300018001	Freshwater Sediment	GGNTTTIGRVSYAGSIGQVNPATGRYIWHTGLPCSVEGTPTLDSAGVLAAGTYSCPKPATPGAYLINASTGAVLKSLPVGSARVFGQIVSAQGTLFVATDTNGLYDFAP
Ga0179596_104383882	3300021086	Vadose Zone Soil	RQVNPATGGFIWQTGLPCAVMGTPTLDGAGVLAAGTYSCPAPNTPGAYLINASTGAILTTLPTGASRVFAQPIFAQGTLFVATETSGLYDFAP
Ga0213873_102718401	3300021358	Rhizosphere	GLPCAVMGTPSLDGASVLAVGTYSCSSATPAPGTPGAYLLDAATGKILETLPVGSSNVFGQPVFAQGNLFVATESNGVYSFAP
Ga0213882_100047076	3300021362	Exposed Rock	MLDSAIVLAVGTYSCSSATPSPGTPGAYLLDAATGKILKTLPVASSNVFGQPVFAQGNLFVATESNGVYSFAP
Ga0126371_107934432	3300021560	Tropical Forest Soil	WQTGLPCAEVGTPSLDSAGVLAVGTWSCTQPSTPGAYLLDASTGAILTTLPTGTSRVFSQPVFAQGTLFVATQTKGLYDFSP
Ga0126371_111156601	3300021560	Tropical Forest Soil	SAGVLAVGTYYRCHSASDAYLINAATGVILTKLPVGSTRIFGQPVFAQGALFVATETHGLYDFAP
Ga0126371_124160491	3300021560	Tropical Forest Soil	MGTPSLDSAGVLAAGTYRCPTGNTPGAYLLDAATGAILTALPVGSSRVFGQPVFAQGTLFAATETQGLFNFAP
Ga0207707_110032841	3300025912	Corn Rhizosphere	QTGLPCAVMGTPSLDSAGVLAAGTYICPAGNTPGAYLINAATGAILKTLPVGSSRVFGQPVFAQGTLFVATETKGLYNFAP
Ga0207700_111426711	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	QTGLPCAVMGTPSLDSAGVLAASTYLCPTGNTPGAYLINVTSGAILKSLPVSSGRVFSQPVFAQGTLFVATETQGLYNFAP
Ga0207664_116758542	3300025929	Agricultural Soil	AGLPCAVMGTPSLDSAGVLAAGTYLCPAGSTPGAYLLNAATGAILKALPVGGSRVFSQPVFAQGSLFIATETRGLYNFTP
Ga0209177_104791551	3300027775	Agricultural Soil	SAGVLAAGTYLCPAGSAPGAYLLNAATGAILKTLPVGGSRVFGQPVFAQGTLFVATETQGLYNFAP
Ga0209465_104462452	3300027874	Tropical Forest Soil	AGVLAAGTYSCPISQAPGAYLINASTGAILKTLPTGPSRVFAQPIFAQGTLFVATEKSGLYDFAP
Ga0209283_101586422	3300027875	Vadose Zone Soil	RQVNPATGAFIWQTGLPCAVMGTPTLDSAGVLAAGTYTCPGTSTPGAYLINASTGAKLKTLPVGSSRVFGQPVFAQGTLFVATETRGLYDFAP
Ga0170818_1006593941	3300031474	Forest Soil	WQTGLPCAVMGTPSLDSAGVLAASTYLCSTGNTPGAYLINATSGAILKSLPVSSGRVFSQPVFAQGTLFVATETQGLYNFAP
Ga0318534_105744922	3300031544	Soil	TIDGTSYGGSVRQVNPATGGYIWQTGLPCAVMGTPSLDSAGVLAAGTYNCTSPNTPGAYLINAATGATLTTLPTGPSRVFGQPVFAQGTLFVATETQGLYNFAP
Ga0318534_106169821	3300031544	Soil	VQELNPATGHLIWQRNLPCAVMGTPSLDSAGVIAAGTYNCLTSTLTPGAYLLNAGTGAILKTLPVGSSKVFGQPVFAEGSLFVATESGGLFSFVP
Ga0318538_103803011	3300031546	Soil	TGTYLWQTGLPCSDAGTPSLDSAGVLAVATWGCTAPNTPGAYLLDAATGAILTTLPMGKSRIFSQPVFAQGTLFVATQAGGLYDFAP
Ga0318538_105765791	3300031546	Soil	TLDSAGVLAVGTYYRCHSASDAYLINAATGVILARLPVGSTRIFGQPVFAQGALFVATETHGLYDFAP
Ga0318571_103855041	3300031549	Soil	AGVLAVGTYSPGTCGTGAYLVNAATGAILTTLPVGTTKVFSQPVFAQGTLFVATETGGLYNFAP
Ga0318573_100554181	3300031564	Soil	VVGTPALDAAGVLAAGTFYRCHTTSDAYLINAATGAILTTLPVGSTRIFSQPVFAQAALFVATETHGLYDFVP
Ga0318573_101839692	3300031564	Soil	VRAGVLAVGTYSPGPCGTGAYLVNAATGAILTTLPVGTSKVFSQPVFAQATLFVATETNGVYNFAP
Ga0318515_106685652	3300031572	Soil	TSTGSVQELNPANGHPIWQTDLPCAVMGSPSLDSAGVLAAGTYNCLTSTLKPGAYLLNASSGAILKTLPVGSGKVFGQPVFAEGSLFVATESGGLFDFLP
Ga0318542_104463482	3300031668	Soil	NPATGHLIWQRNLPCAVMGTPSLDSAGVIAAGTYNCLTSTLTPGAYLLNAGTGAILKTLPVGSSKVFGQPVFAEGSLFVATESGGLFSFVP
Ga0318561_103764341	3300031679	Soil	TYGGSIGQVNPATGSYIWHTGLPCSVEGTPTLDSAGVLGVGTYSCPKPATPDAYLINASTGAILKSLSVGSTKLFGQLVFAQGTLFVATATNGLYDFAP
Ga0318561_105862681	3300031679	Soil	GTSYGGSVRQVNPATGGYIWQTGLPCAVMGTPSLDSAGVLAAGTYNCTSPNTPGAYLINAATGATLTTLPTGPSRVFGQPVFAQGTLFVATETQGLYNFAP
Ga0318574_100693453	3300031680	Soil	TKYGGSIDEVNPATGAYLWRTGLPCTVVGTPALDAAGVLAAGTFYRCHTTSDAYLINAATGAILTTLPVGSTRIFGQPVFAQAALFVATETHGLYDFTP
Ga0318574_108151801	3300031680	Soil	SLDSAGVLAAGTYNCLTSTLKPGAYLLDAGSGAMLKTLPVGSSKVFGQPVFAEGSLFVATESGGLYDFVP
Ga0318572_101662292	3300031681	Soil	VEGAGVLAAGTFYRCHTTSDAYLINAATGAILTTLPVGSTRIFSQPVFAQAALFVATETHGLYDFTP
Ga0318560_101956583	3300031682	Soil	AGVLGVGTYSCPKPATPDAYLINASTGAILKSLSVGSTKLFGQLVFAQGTLFVATATNGLYDFAP
Ga0306917_115951002	3300031719	Soil	NLPCAVMGSPSLDSAGVLAAGTYNCLTSTLKPGAYLLDAGSGAMLKTLPVGSSKVFGQPVFAEGSLFVATESGGLYDFVP
Ga0318493_101612792	3300031723	Soil	GSVRQANPATGGYIWQTGLPCAVMGTPSLDSAGVLAAGTYNCTSPNTPGAYLINAATGATLTTLPTGPSRVFGQPVFAQGTLFVATETQGLYNFAP
Ga0318493_103259822	3300031723	Soil	SPSLDSAGVLAAGTYNCFKPPPPGFTPGAYLLKASTGAMLKTLPVSSSKVFGQPVFAEGSLFVATESGGLYDFVP
Ga0318493_108268411	3300031723	Soil	YIWHTGLPCSVEGTPTLDSAGVLGVGTYSCPKPATPDAYLINASTGAILKSLSVGSTKLFGQLVFAQGTLFVATATNGLYDFAP
Ga0318500_100447421	3300031724	Soil	AGQASPATGAFIWQTGLPCPVEGTPSLDSAGVLAVGTYSPGTCGTGAYLVNAATGAILTTLPVGTTKVFSQPVFAQGTLFVATETGGLYNFAP
Ga0318502_102278752	3300031747	Soil	GGSVRQVNPATGGYIWQTGLPCAVMGTPSLDSAGVLAAGTYNCTSPNTPGAYLINAATGATLTTLPTGPSRVFGQPVFAQGTLFVATETQGLYNFAP
Ga0318554_100102411	3300031765	Soil	PCAVVGTPALDSAGVLAVGTFYRCHSTSDAYLLDAATGSVLTTLPVGSTRVFGQPVFAQGALFVATETNGLYDFVP
Ga0318554_102742052	3300031765	Soil	TNAGSVRELDPADGSVIWQTNLPCAVMGTPSLDSAGVLAAGTYNCFKPPPPGFTPGAYLLKASNGAMLKTLPVGSSKVFGQPVFAEGSLFVATESGGLYDFVP
Ga0318521_100203651	3300031770	Soil	PCAVMGTPSLDSAGVLAAGTYNCTSPNTPGAYLINAATGATLTTLPTGPSRVFGQPVFAQGTLFVATETQGLYNFAP
Ga0318546_106457662	3300031771	Soil	GEPTTINGTSYGGSVRQVNPATGGYIWQTGLPCAVMGTPSLDSAGVLAAGTYNCTSPNTPGAYLINAATGATLTTLPTGPSRVFGQPVFAQGTLFVATETQGLYNFAP
Ga0318543_104539411	3300031777	Soil	AAGTYNCTSPNTPGAYLINAATGAILTTLPTGPSRVFGQPVFAQGTLFVATETQGLYNFA
Ga0318498_102941732	3300031778	Soil	IGTTKYGGSIDEVNPATGAYLWRTGLPCTVVGTPALDAAGVLAAGTFYRCHTTSDAYLINAATGAILTTLPVGSTRIFSQPVFAQAALFVATETHGLYDFTP
Ga0318566_105824662	3300031779	Soil	GTPSLDSAGVLAAGTYNCFKPPPPGFTPGAYLLKASNGAMLKTLPVGSSKVFGQPVFAEGSLFVATESGGLYDFVP
Ga0318508_10807051	3300031780	Soil	LPCAVMGTPSLDSAGVLAAGTYNCTSPNTPGAYLINAATGATLTTLPTGPSRVFGQPVFAQGTLFVATETQGLYNFAP
Ga0318547_106738211	3300031781	Soil	VMGTPSLDSAGVLAAGTYNCTSPNTPGAYLINAATGAILTTLPTGPSRVFGQPVFAQGTLFVATETQGLYNFAP
Ga0318552_100065206	3300031782	Soil	ASTPALDSAGVLAVGTFYRCHSTSDAYLLDAATGSVLTTLPVGSTRVFGQPVFAQGALFVATETNGLYDFVP
Ga0318548_101846152	3300031793	Soil	LIWQRNLPCAVMGTPSLDSAGVIAAGTYNCLTSTLTPGAYLLNAGTGAILKTLPVGSSKVFGQPVFAEGSLFVATESGGLFSFVP
Ga0318503_103026062	3300031794	Soil	SVIWQTNLPCAVMGTPSLDSAGVLAAGTYNCFKPPPPGFTPGAYLLKASNGAMLKTLPVGSSKVFGQPVFAEGSLFVATESGGLYDFVP
Ga0318557_105029851	3300031795	Soil	SLDSAGVIAAGTYNCLTSTLTPGAYLLNAGTGAILKTLPVGSSKVFGQPVFAEGSLFVATESGGLFSFVP
Ga0318576_104517262	3300031796	Soil	EPTTINGTSYGGSVRQVNPATGGYIWQTGLPCAVMGTPSLDSAGVLAAGTYNCTSPNTPGAYLINAATGATLTTLPTGPSRVFGQPVFAQGTLFVATETQGLYNFAP
Ga0318550_100264253	3300031797	Soil	IDGTSYGGSVRQVNPATGGYIWQTGLPCAVMGTPSLDSAGVLAAGTYNCTSPNTPGAYLINAATGATLTTLPTGPSRVFGQPVFAQGTLFVATETQGLYNFAP
Ga0318523_105260592	3300031798	Soil	IDEVNPATGAYLWRTGLPCTVVGTPALDAAGVLAAGTFYRCHTTSDAYLINAATGAILTTLPVGSTRIFSQPVFAQAALFVATETHGLYDFTP
Ga0318565_101546882	3300031799	Soil	SLDSAGVLAAGTYNCTSPNTPGAYLINAATGAILTTLPTGPSRVFGQPVFAQGTLFVATETQGLYNFAP
Ga0318568_103145312	3300031819	Soil	PCSVEGTPTLDSAGVLAVGTYSCPKPATPGAYLIRASTGTVLKSLPVGSAKVFGQMVFAQGALFVATDKNGLYDFMP
Ga0318567_106428892	3300031821	Soil	TTINGTSYGGSVRQVNPATGGYIWQTGLPCAVMGTPSLDSAGVLAAGTYNCTSPNTPGAYLINAATGATLTTLPTGPSRVFGQPVFAQGTLFVATETQGLYNFAP
Ga0318567_106691801	3300031821	Soil	SVEGTPTLDSAGVLGVGTYSCPKPATPDAYLINASTGAILKSLSVGSTKLFGQLVFAQGTLFVATATNGLYDFAP
Ga0318499_101693262	3300031832	Soil	AAGTYNCTSPNTPGAYLINAATGATLTTLPTGPSRVFGQPVFAQGTLFVATETQGLYNFA
Ga0318512_106946571	3300031846	Soil	ASDARGAAGLTGADAGSIGQVNPTTGRYIWRTGLPCSVEGTPTLDSAGVLAVGTYSCPKPATPGAYLIRASTGTVLKSLPVGSAKVFGQMVFAQGALFVATDKNGLYDFMP
Ga0318495_100161504	3300031860	Soil	TVVGTPTLDSAGVLAVGTFRCVSPSTPGAYLVNAATGAILATLPVGPAKVFGQPVFAQGTLFVATETNGLYDFVP
Ga0318536_101564372	3300031893	Soil	RTGLPCTVEGTPSLDSAGVLAVGTYSPGPCGTGAYLVNAATGAILTTLPVGTSKVFSQPVFAQATLFVATETNGVYNFAP
Ga0318551_104661372	3300031896	Soil	VLAAGTYNCFKPPPPGFTPGAYLLKASNGAMLKTLPVGSSKVFGQPVFAEGSLFVATESGGLYDFVP
Ga0306923_113829632	3300031910	Soil	CAVMGSPSLDSAGVLAAGTYNCLTSTLKPGAYLLDAGSGAMLKTLPVGSSKVFGQPVFAEGSLFVATESGGLYDFVP
Ga0310913_105347262	3300031945	Soil	HLIWQRNLPCAVMGTPSLDSAGVIAAGTYNCLTSTLTPGAYLLNAGTGAILKTLPVGSSKVFGQPVFAEGSLFVATESGGLFSFVP
Ga0310910_107837771	3300031946	Soil	IWHTGLPCSVEGTPTLDSAGVLGVGTYSCPKPATPDAYLINASTGAILKSLSVGSTKLFGQLVFAQGTLFVATATNGLYDFAP
Ga0310909_106697581	3300031947	Soil	LAVGTFRCVSPSTPGAYLVNAATGAILATLPVGPAKVFGQPVFAQGTLFVATETNGLYDFAPASGNP
Ga0306926_104330763	3300031954	Soil	NPTTGRYIWRTGLPCSVEGTPTLDSAGVLAVGTYSCPKPATPGAYLIRASTGTVLKSLPVGSAKVFGQMVFAQGALFVATDKNGLYDFMP
Ga0318563_100499453	3300032009	Soil	ELNPATGHLIWQRNLPCAVMGTPSLDSAGVIAAGTYNCLTSTLTPGAYLLNAGTGAILKTLPVGSSKVFGQPVFAEGSLFVATESGGLFSFVP
Ga0318569_105249872	3300032010	Soil	LPCAVMGTPSLDSAGVIAAGTYNCLTSTLTPGAYLLNAGTGAILKTLPVGSSKVFGQPVFAEGSLFVATESGGLFSFVP
Ga0318549_101126601	3300032041	Soil	TKYGGSIDEVNPATGAYLWRTGLPCTVVGTPALDAAGVLAAGTFYRCHTTSDAYLINAATGAILTTLPVGSTRIFSQPVFAQAALFVATETHGLYDFTP
Ga0318556_105316272	3300032043	Soil	TINGTSYGGSVRQVNPATGGYIWQTGLPCAVMGTPSLDSAGVLAAGTYNCTSPNTPGAYLINAATGATLTTLPTGPSRVFGQPVFAQGTLFVATETQGLYNFAP
Ga0318570_103482581	3300032054	Soil	LDSAGVLAAGTYNCTSPNTPGAYLINAATGATLTTLPTGPSRVFGQPVFAQGTLFVATETQGLYNFAP
Ga0318505_100974103	3300032060	Soil	TNAGSVQELNPATGHLIWQRNLPCAVMGTPSLDSAGVIAAGTYNCLTSTLTPGAYLLNAGTGAILKTLPVGSSKVFGQPVFAEGSLFVATESGGLFSFVP
Ga0318505_103046671	3300032060	Soil	GAGVLAAGTFYRCHTTSDAYLINAATGAILTTLPVGSTRIFSQPVFAQAALFVATETHGLYDFTP
Ga0318505_104154882	3300032060	Soil	PSLDSAGVLAAGTYNCTSPNTPGAYLINAATGATLTTLPTGPSRVFGQPVFAQGTLFVATETQGLYNFAP
Ga0318513_101016851	3300032065	Soil	MGSPSLDSAGVLAAGTYNCLTSTLKPGAYLLDAGSGAMLKTLPVGSSKVFGQPVFAEGSLFVATESGGLYDFVP
Ga0318553_105279141	3300032068	Soil	INGTSYGGSVRQANPATGGYIWQTGLPCAVMGTPSLDSAGVLAAGTYNCTSPNTPGAYLINAATGATLTTLPTGPSRVFGQPVFAQGTLFVATETQGLYNFAP
Ga0318577_103472822	3300032091	Soil	GSVRQANPATGGYIWQTGLPCAVMGTPSLDSAGVLAAGTYNCTSPNTPGAYLINAATGAILTTLPTGPSRVFGQPVFAQGTLFVATETQGLYNFAP
Ga0306920_1004005481	3300032261	Soil	ELNPANGHPMWQTNLPCAVMGSPSLDSAGVLAAGTYNCLTSTLKPGAYLLDAGSGAMLKTLPVGSSKVFGQPVFAEGSLFVATESGGLYDFVP
Ga0310914_105586021	3300033289	Soil	LPCAVMGTPSLDSAGVLAAGTYNCTSPNTPGAYLINAATGATLKTLPTGPSRVFGQPVFAQGTLFVATETQGLYNFAP
Ga0318519_100416444	3300033290	Soil	PCTVVGTPALDAAGVLAAGTFYRCHTTSDAYLINAATGAILTTLPVGSTRIFSQPVFAQAALFVATETHGLYDFTP
Ga0318519_102359412	3300033290	Soil	VMGSPSLDSAGVLAAGTYNCLTSTLKPGAYLLDAGSGAMLKTLPVGSSKVFGQPVFAEGSLFVATESGGLYDFVP
Ga0318519_103145511	3300033290	Soil	TIGGTKYGGSIRQVSPATGAFGWQTGLPCPVEGTPSLDSAGVLAVGTYSPGTCGTGAYLVNAATGAILTTLPVGTTKVFSQPVFAQGTLFVATETGGLYNFAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F054701

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences