Metagenome / Metatranscriptome Family F054717

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054717
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	41 residues
Representative Sequence	STEEIASSANQLAEAADKLTGAVKSFRLLADEEPPPERQAAD
Number of Associated Samples	105
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.56 %
% of genes from short scaffolds (< 2000 bps)	79.86 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.209 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (25.899 % of family members)
Environment Ontology (ENVO)	Unclassified (55.396 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.432 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.29% β-sheet: 0.00% Coil/Unstructured: 55.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF01842	ACT	15.83
PF02826	2-Hacid_dh_C	7.91
PF02274	ADI	7.91
PF02738	MoCoBD_1	6.47
PF16576	HlyD_D23	4.32
PF12704	MacB_PCD	2.88
PF00583	Acetyltransf_1	1.44
PF03544	TonB_C	1.44
PF00266	Aminotran_5	1.44
PF12700	HlyD_2	1.44
PF00326	Peptidase_S9	1.44
PF13205	Big_5	1.44
PF00072	Response_reg	0.72
PF01734	Patatin	0.72
PF00903	Glyoxalase	0.72
PF13589	HATPase_c_3	0.72
PF14559	TPR_19	0.72
PF00271	Helicase_C	0.72
PF01634	HisG	0.72
PF02412	TSP_3	0.72
PF13517	FG-GAP_3	0.72
PF07969	Amidohydro_3	0.72
PF07676	PD40	0.72
PF00529	CusB_dom_1	0.72
PF00069	Pkinase	0.72
PF14026	DUF4242	0.72
PF05973	Gp49	0.72
PF01863	YgjP-like	0.72
PF13491	FtsK_4TM	0.72
PF02774	Semialdhyde_dhC	0.72
PF06114	Peptidase_M78	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG1834	N-Dimethylarginine dimethylaminohydrolase	Amino acid transport and metabolism [E]	7.91
COG2235	Arginine deiminase	Amino acid transport and metabolism [E]	7.91
COG4874	Uncharacterized conserved protein	Function unknown [S]	7.91
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.88
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	1.44
COG0002	N-acetyl-gamma-glutamylphosphate reductase	Amino acid transport and metabolism [E]	0.72
COG0040	ATP phosphoribosyltransferase	Amino acid transport and metabolism [E]	0.72
COG0136	Aspartate-semialdehyde dehydrogenase	Amino acid transport and metabolism [E]	0.72
COG1451	UTP pyrophosphatase, metal-dependent hydrolase family	General function prediction only [R]	0.72
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	0.72
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	0.72
COG3657	Putative component of the toxin-antitoxin plasmid stabilization module	Defense mechanisms [V]	0.72
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	0.72
COG4679	Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin system	Defense mechanisms [V]	0.72

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.21 %
Unclassified	root	N/A	10.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.21 %
Unclassified	root	N/A	10.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.21 %
Unclassified	root	N/A	10.79 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	28.06 %
Unclassified	root	N/A	10.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.16 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	19.42 %
Unclassified	root	N/A	10.79 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	6.47 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	16.55 %
Unclassified	root	N/A	10.79 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5.04 %
Ignavibacteriae	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae	1.44 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.72 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	15.11 %
Unclassified	root	N/A	10.79 %
Bacteroidetes Order II. Incertae sedis	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis	1.44 %
Ignavibacteria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria	1.44 %
Gemmatimonadetes bacterium 13_2_20CM_2_66_5	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_66_5	0.72 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.72 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	0.72 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.72 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	15.11 %
Unclassified	root	N/A	10.79 %
unclassified Ignavibacteria	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria	1.44 %
Rhodothermaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae	1.44 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	0.72 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.72 %
Gemmatimonadetes bacterium 13_2_20CM_2_66_5	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_66_5	0.72 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	0.72 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	15.11 %
Unclassified	root	N/A	10.79 %
Ignavibacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	1.44 %
unclassified Rhodothermaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → unclassified Rhodothermaceae	0.72 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.72 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	0.72 %
Gemmatimonadetes bacterium 13_2_20CM_2_66_5	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_66_5	0.72 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	0.72 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	15.11 %
Unclassified	root	N/A	10.79 %
Ignavibacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	1.44 %
Rhodothermaceae bacterium RA	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → unclassified Rhodothermaceae → Rhodothermaceae bacterium RA	0.72 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.72 %
Bacteroidetes bacterium 13_1_20CM_4_60_6	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	0.72 %
Gemmatimonadetes bacterium 13_2_20CM_2_66_5	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_66_5	0.72 %
Gemmatimonadetes bacterium SCN 70-22	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	0.72 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002908\|JGI25382J43887_10046287	All Organisms → cellular organisms → Bacteria	2366	Open in IMG/M
3300002908\|JGI25382J43887_10252491	All Organisms → cellular organisms → Bacteria → Proteobacteria	809	Open in IMG/M
3300005167\|Ga0066672_10044053	All Organisms → cellular organisms → Bacteria	2525	Open in IMG/M
3300005174\|Ga0066680_10184151	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300005179\|Ga0066684_10968134	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	551	Open in IMG/M
3300005180\|Ga0066685_10053189	All Organisms → cellular organisms → Bacteria	2605	Open in IMG/M
3300005181\|Ga0066678_10784876	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300005184\|Ga0066671_10210248	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300005434\|Ga0070709_10218557	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300005444\|Ga0070694_101331615	Not Available	605	Open in IMG/M
3300005446\|Ga0066686_10046882	All Organisms → cellular organisms → Bacteria	2620	Open in IMG/M
3300005446\|Ga0066686_10983740	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300005451\|Ga0066681_10452402	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	789	Open in IMG/M
3300005471\|Ga0070698_101641386	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005540\|Ga0066697_10245146	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300005552\|Ga0066701_10670994	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	625	Open in IMG/M
3300005555\|Ga0066692_10938931	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300005556\|Ga0066707_10061512	Not Available	2211	Open in IMG/M
3300005557\|Ga0066704_10778280	All Organisms → cellular organisms → Bacteria → FCB group	596	Open in IMG/M
3300005558\|Ga0066698_11067015	All Organisms → cellular organisms → Bacteria → FCB group	511	Open in IMG/M
3300005576\|Ga0066708_11064017	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	502	Open in IMG/M
3300005586\|Ga0066691_10258905	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300006031\|Ga0066651_10233261	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300006034\|Ga0066656_10877502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	574	Open in IMG/M
3300006046\|Ga0066652_100817515	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300006046\|Ga0066652_102041076	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300006794\|Ga0066658_10875593	All Organisms → cellular organisms → Bacteria → FCB group	514	Open in IMG/M
3300006800\|Ga0066660_10095177	All Organisms → cellular organisms → Bacteria	2092	Open in IMG/M
3300006800\|Ga0066660_10296281	All Organisms → cellular organisms → Bacteria	1289	Open in IMG/M
3300006800\|Ga0066660_10717690	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300006903\|Ga0075426_10803750	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300006914\|Ga0075436_100596940	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300007076\|Ga0075435_100611323	All Organisms → cellular organisms → Bacteria	945	Open in IMG/M
3300007258\|Ga0099793_10083680	All Organisms → cellular organisms → Bacteria	1459	Open in IMG/M
3300007258\|Ga0099793_10322260	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	753	Open in IMG/M
3300007258\|Ga0099793_10338071	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300007258\|Ga0099793_10341975	Not Available	730	Open in IMG/M
3300009012\|Ga0066710_101098813	All Organisms → cellular organisms → Bacteria	1230	Open in IMG/M
3300009012\|Ga0066710_101800585	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	925	Open in IMG/M
3300009012\|Ga0066710_102230316	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	798	Open in IMG/M
3300009088\|Ga0099830_11019621	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	686	Open in IMG/M
3300009100\|Ga0075418_11063324	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300009137\|Ga0066709_100472924	All Organisms → cellular organisms → Bacteria	1758	Open in IMG/M
3300009147\|Ga0114129_11092325	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_2_66_5	999	Open in IMG/M
3300009162\|Ga0075423_11528067	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300010127\|Ga0127489_1137778	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300010304\|Ga0134088_10046622	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1985	Open in IMG/M
3300010304\|Ga0134088_10153484	All Organisms → cellular organisms → Bacteria	1096	Open in IMG/M
3300010320\|Ga0134109_10067131	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300010320\|Ga0134109_10213166	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	717	Open in IMG/M
3300010320\|Ga0134109_10391060	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300010321\|Ga0134067_10171989	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300010322\|Ga0134084_10259540	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	631	Open in IMG/M
3300010322\|Ga0134084_10382094	Not Available	545	Open in IMG/M
3300010323\|Ga0134086_10127415	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300010326\|Ga0134065_10131393	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300010333\|Ga0134080_10014527	All Organisms → cellular organisms → Bacteria	2852	Open in IMG/M
3300010333\|Ga0134080_10071303	Not Available	1394	Open in IMG/M
3300010333\|Ga0134080_10072826	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300010336\|Ga0134071_10129188	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1219	Open in IMG/M
3300010336\|Ga0134071_10414414	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	687	Open in IMG/M
3300012160\|Ga0137349_1051615	Not Available	724	Open in IMG/M
3300012198\|Ga0137364_10092439	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2114	Open in IMG/M
3300012198\|Ga0137364_10183304	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300012198\|Ga0137364_10828909	All Organisms → cellular organisms → Bacteria	699	Open in IMG/M
3300012200\|Ga0137382_10073948	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2192	Open in IMG/M
3300012200\|Ga0137382_10160634	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300012200\|Ga0137382_10552416	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300012200\|Ga0137382_10998529	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300012200\|Ga0137382_11123149	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	561	Open in IMG/M
3300012206\|Ga0137380_10562278	Not Available	1000	Open in IMG/M
3300012208\|Ga0137376_10061264	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3104	Open in IMG/M
3300012208\|Ga0137376_10139886	Not Available	2078	Open in IMG/M
3300012208\|Ga0137376_10668505	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	897	Open in IMG/M
3300012211\|Ga0137377_10100528	All Organisms → cellular organisms → Bacteria → Proteobacteria	2739	Open in IMG/M
3300012350\|Ga0137372_10601046	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300012351\|Ga0137386_10078249	All Organisms → cellular organisms → Bacteria	2314	Open in IMG/M
3300012353\|Ga0137367_10206231	Not Available	1423	Open in IMG/M
3300012354\|Ga0137366_10035898	All Organisms → cellular organisms → Bacteria	3843	Open in IMG/M
3300012354\|Ga0137366_10209116	All Organisms → cellular organisms → Bacteria	1455	Open in IMG/M
3300012358\|Ga0137368_10096604	All Organisms → cellular organisms → Bacteria	2305	Open in IMG/M
3300012358\|Ga0137368_10160981	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium SCN 70-22	1645	Open in IMG/M
3300012359\|Ga0137385_10130690	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2215	Open in IMG/M
3300012360\|Ga0137375_10008094	All Organisms → cellular organisms → Bacteria	12508	Open in IMG/M
3300012401\|Ga0134055_1112912	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	551	Open in IMG/M
3300012923\|Ga0137359_11239248	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300012927\|Ga0137416_10194994	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1621	Open in IMG/M
3300012976\|Ga0134076_10009489	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → unclassified Rhodothermaceae → Rhodothermaceae bacterium RA	3288	Open in IMG/M
3300013297\|Ga0157378_11619585	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300014157\|Ga0134078_10644624	Not Available	513	Open in IMG/M
3300014157\|Ga0134078_10673292	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300014166\|Ga0134079_10748879	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300015356\|Ga0134073_10021091	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae	1564	Open in IMG/M
3300015358\|Ga0134089_10067872	Not Available	1327	Open in IMG/M
3300015359\|Ga0134085_10269669	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300015359\|Ga0134085_10319673	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	685	Open in IMG/M
3300015371\|Ga0132258_10481585	All Organisms → cellular organisms → Bacteria	3099	Open in IMG/M
3300017657\|Ga0134074_1200022	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300017659\|Ga0134083_10480020	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300018056\|Ga0184623_10037810	All Organisms → cellular organisms → Bacteria → Acidobacteria	2187	Open in IMG/M
3300018056\|Ga0184623_10071872	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1592	Open in IMG/M
3300018082\|Ga0184639_10198997	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1063	Open in IMG/M
3300018431\|Ga0066655_10258921	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300018433\|Ga0066667_10010120	All Organisms → cellular organisms → Bacteria	4487	Open in IMG/M
3300018433\|Ga0066667_10223402	All Organisms → cellular organisms → Bacteria	1405	Open in IMG/M
3300018433\|Ga0066667_12157703	Not Available	517	Open in IMG/M
3300018482\|Ga0066669_10469191	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300020003\|Ga0193739_1027137	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1488	Open in IMG/M
3300021081\|Ga0210379_10263344	Not Available	750	Open in IMG/M
3300021086\|Ga0179596_10390390	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300021344\|Ga0193719_10297835	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	677	Open in IMG/M
3300021560\|Ga0126371_13583213	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300025322\|Ga0209641_10436660	Not Available	939	Open in IMG/M
3300026298\|Ga0209236_1019040	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3874	Open in IMG/M
3300026301\|Ga0209238_1181110	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium 13_1_20CM_4_60_6	620	Open in IMG/M
3300026307\|Ga0209469_1007417	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	4354	Open in IMG/M
3300026307\|Ga0209469_1051869	Not Available	1290	Open in IMG/M
3300026308\|Ga0209265_1097160	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300026313\|Ga0209761_1003351	All Organisms → cellular organisms → Bacteria	10583	Open in IMG/M
3300026316\|Ga0209155_1174319	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300026323\|Ga0209472_1121473	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1022	Open in IMG/M
3300026331\|Ga0209267_1290191	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300026332\|Ga0209803_1062112	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300026342\|Ga0209057_1200652	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300026343\|Ga0209159_1143538	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300026529\|Ga0209806_1119410	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300026536\|Ga0209058_1014892	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5328	Open in IMG/M
3300026548\|Ga0209161_10471951	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	553	Open in IMG/M
3300027273\|Ga0209886_1074592	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300027480\|Ga0208993_1005468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2137	Open in IMG/M
3300027725\|Ga0209178_1129916	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300027765\|Ga0209073_10186951	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300027787\|Ga0209074_10123037	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300027787\|Ga0209074_10212325	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300027846\|Ga0209180_10180835	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300027875\|Ga0209283_10011009	All Organisms → cellular organisms → Bacteria	5360	Open in IMG/M
3300033432\|Ga0326729_1001246	All Organisms → cellular organisms → Bacteria	5503	Open in IMG/M
3300033502\|Ga0326731_1095142	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300033814\|Ga0364930_0318232	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.24%
Host-Associated	Host-Associated	5.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.65%
Plants	Host-Associated → Plants	5.76%
Aquatic	Environmental → Aquatic	3.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.49%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.04%
Sediment	Environmental → Aquatic → Sediment	2.88%
Peat	Environmental → Terrestrial → Peat	1.44%
Freshwater	Environmental → Aquatic → Freshwater	0.72%
Floodplain	Environmental → Terrestrial → Floodplain	0.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.04%
Loam	Environmental → Terrestrial → Soil → Loam	4.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.44%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.72%
Sand	Environmental → Terrestrial → Soil → Sand	0.72%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	35.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.16%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.44%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.72%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	25.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.02%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	19.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.07%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.44%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.44%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.72%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.72%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.72%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010127	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300012160	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT630_2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027273	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300033432	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF6AY SIP fraction	Environmental	Open in IMG/M
3300033502	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF9FY SIP fraction	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J43887_100462871	3300002908	Grasslands Soil	TEEIASSANQLAEAADKLTGAVKTFRLLKDEEQRTEQAAD*
JGI25382J43887_102524912	3300002908	Grasslands Soil	EEIASSANQLAEAADKLTGAVKTFRLLKDEERRTEQAAD*
Ga0066672_100440533	3300005167	Soil	EQSASTEEIASSANQLAEAADKLTGAVKSFRLLADEEPPPERQAAD*
Ga0066680_101841511	3300005174	Soil	EIASSANQLAEAADRLTGAVKSFRLLADEVPPPERQAAD*
Ga0066684_109681342	3300005179	Soil	STEEIASSANQLAEAADRLTGAVKSFRLLADEQQHQQAAD*
Ga0066685_100531891	3300005180	Soil	SASTEEIASSANQLAEAADKLQGAVKTFRLLQDEVVEPTRQAAD*
Ga0066678_107848762	3300005181	Soil	EIASSANQLAEAADKLTGAVKSFRLLADEAPPPERQAAD*
Ga0066671_102102481	3300005184	Soil	SASTEEIASSANQLAEAADKLTGAVKSFRLLADEEPPREQAAD*
Ga0070709_102185571	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	SASTQEIASSANQLAEAADKLTGAVKSFRLLADEEPPPQQQAAD*
Ga0070694_1013316151	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	STQEIASSANQLAEAADRLTGAVKSFRLLADEQSQEQPQAAD*
Ga0066686_100468821	3300005446	Soil	EIASSANQLAEAADKLTGAVKSFRLLADEEPPPQQQAAD*
Ga0066686_109837401	3300005446	Soil	QEIASSANQLAEASDRLTGAVKSFRLLADEEPPARQAAD*
Ga0066681_104524022	3300005451	Soil	EEIASSANQLAEAADKLQGAVKSFRLLQDEVVEPTRQAAD*
Ga0070698_1016413862	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GQEQSASTEEIAASANRLAEAADKLTGAVKSFRLLADEVHTPEREAAD*
Ga0066697_102451461	3300005540	Soil	SQEQSASTEEIASSANQLAEAADKLQGAVKTFRLLQDEVVEPTRQAAD*
Ga0066701_106709941	3300005552	Soil	AASANQLAEAADKLSDAVKSFRLLADEGPPPERQAAD*
Ga0066692_109389312	3300005555	Soil	SASTEEIAASANQLAEAADKLSDAVKSFRLLADEGPPPERQAAD*
Ga0066707_100615121	3300005556	Soil	EEIASSANQLAEAADKLTGAVKSFRLLADEEPPPERQAAD*
Ga0066704_107782802	3300005557	Soil	STEEIASSANQLAEAADKLTGAVKSFRLLADEEPPPERQAAD*
Ga0066698_110670152	3300005558	Soil	IASSANQLAEAADKLTGAVKSFRLLADEEPPPQQQAAD*
Ga0066708_110640172	3300005576	Soil	EEQSASTEEIASSANQLAEAADRLTGAVKSFRLLADEQQEQAAD*
Ga0066691_102589051	3300005586	Soil	SANQLAEAADKLTGAVKSFRLLADEAPPPERQAAD*
Ga0066651_102332611	3300006031	Soil	SASTEEIASSANQLAEAADKLQGAVKTFRLLQDEAVEPTRQAAD*
Ga0066656_108775022	3300006034	Soil	EEQSASTEEIASSANQLAEAADKLTGAVKSFRLLADEEPPPQQQAAD*
Ga0066652_1008175151	3300006046	Soil	TEEIASSANQLAEAADKLTGAVKSFRLLADEEPPREQAAD*
Ga0066652_1020410762	3300006046	Soil	EEIASSANQLAEAADRLTGAVKSFRLLADEVQQAAD*
Ga0066658_108755932	3300006794	Soil	EEIASSANQLAEAADKLTGAVKSFRLLADEEPPPQQQAAD*
Ga0066660_100951771	3300006800	Soil	EEQSASTEEIASSANQLAEAADKLTGAVKSFRLLADEEPPPERQAAD*
Ga0066660_102962811	3300006800	Soil	SEEQSASTEEIASSANQLAEAADKLTGAVKSFRLLADEEPHRQQAAD*
Ga0066660_107176902	3300006800	Soil	QSASTEEIASSANQLAEAADKLTGAVKSFRLLADEEPPREQAAD*
Ga0075426_108037501	3300006903	Populus Rhizosphere	QSASTEEIASSANQLAEAADKLTGAVKSFRLLADEEPPPQQQAAD*
Ga0075436_1005969401	3300006914	Populus Rhizosphere	EIASSANQLAQAADHLTGAVKSFRLTATDEPEQPREAAD*
Ga0075435_1006113232	3300007076	Populus Rhizosphere	GEEQSASTEEIASSANQLAEAADRLTGAVKSFRLLADEVQPQAAD*
Ga0099793_100836801	3300007258	Vadose Zone Soil	TEEIASSANQLAEAADRLTGAVKSFRLLADEPQQRQAAD*
Ga0099793_103222602	3300007258	Vadose Zone Soil	EEIASSANQLAEAADRLTGAVKSFRLLEDEQQQQAAD*
Ga0099793_103380711	3300007258	Vadose Zone Soil	TASTQEIAASANQLAEAADKLSDAVKSFRLLAEQAAVPGSSPTQEAAD*
Ga0099793_103419751	3300007258	Vadose Zone Soil	EQSASTEEIASSANQLAEAADRLTGAVQSFRLLEDEQQQQAAD*
Ga0066710_1010988132	3300009012	Grasslands Soil	EEIASSANQLAEAADRLTGAVKSFRLLADEVPPPERQAAD
Ga0066710_1018005852	3300009012	Grasslands Soil	SSANQLAEAADKLQGAVKTFRLLQDEPEEPTRQAAD
Ga0066710_1022303161	3300009012	Grasslands Soil	EIASSANQLAEAADKLQGAVKTFRLLQDEVVEPTRQAAD
Ga0099830_110196211	3300009088	Vadose Zone Soil	SANQLAEAADKLTGAVKTFRLLAEEEQQPPAQAAD*
Ga0075418_110633241	3300009100	Populus Rhizosphere	EEIASSANQLAEAADKLTGAVKTFRLLADTEPPASQAAD*
Ga0066709_1004729244	3300009137	Grasslands Soil	LEPSSANQLAEAADKLTGAVKSFRLLADEEPPREQAAD*
Ga0114129_110923251	3300009147	Populus Rhizosphere	ASTEEIAASANRLAEAADKLTGAVKSFRLLADEEHIPEREAAD*
Ga0075423_115280671	3300009162	Populus Rhizosphere	IASSANQLAQAADNLTATVKSFRLLADQAPEPETRQAAD*
Ga0127489_11377783	3300010127	Grasslands Soil	VNQLAEAADKLTGAVKSFRLLADEEPPPQQQAAD*
Ga0134088_100466221	3300010304	Grasslands Soil	QTASTEEIASSANQLAEAADKLTGAVKTFRLLKDEERRSEQAAD*
Ga0134088_101534842	3300010304	Grasslands Soil	ASTEEIASSANQLAEAADKLTGAVKSFRLLADEAPPPQQQAAD*
Ga0134109_100671312	3300010320	Grasslands Soil	ASSANQLAEAADKLTGAVKSFRLLADEEPPPQQQAAD*
Ga0134109_102131661	3300010320	Grasslands Soil	SANQLAEAADKLTGAVKSFRLLADEEPPPERQAAD*
Ga0134109_103910601	3300010320	Grasslands Soil	TEEIASSANQLADAADRLTGAVKSFRLLADEPQQEQAAD*
Ga0134067_101719891	3300010321	Grasslands Soil	TEEIASSANQLAEAADKLTGAVKSFRLLADEEPPRQQAAD*
Ga0134084_102595401	3300010322	Grasslands Soil	TEEIASSANQLAEAADKLQGAVKSFRLLQDEVVEPTRQAAD*
Ga0134084_103820942	3300010322	Grasslands Soil	TEEIASSANQLAEAADKLTGAVKSFRLLADEEPPPQQQAAD*
Ga0134086_101274152	3300010323	Grasslands Soil	STEEIASSANQLAEAADKLTGAVKSFRLLADEAPPPERQAAD*
Ga0134065_101313932	3300010326	Grasslands Soil	QSASTQEIASSANQLAEASDRLTGAVKSFRLLADEEPPARQAAD*
Ga0134080_100145271	3300010333	Grasslands Soil	EQSASTEEIASSANQLAEAADKLTGAVKSFRLLADEEPPPQQQAAD*
Ga0134080_100713032	3300010333	Grasslands Soil	SQQQSASTQEIASSANQLAEASDRLTGAVKSFRLLADEAPPARQAAD*
Ga0134080_100728261	3300010333	Grasslands Soil	STEEIASSANQLAEAADRLTGAVKSFRLLADEVQQAAD*
Ga0134071_101291881	3300010336	Grasslands Soil	ANQLAEAADKLQGAVKTFRLLQDEPEEPTRQAAD*
Ga0134071_104144141	3300010336	Grasslands Soil	EQSASTEEIASSANQLAEAADRLTGAVKSFRLLADEATPPPEQQAAD*
Ga0137349_10516151	3300012160	Soil	EQTASTQEVASSANQLAEAADRLTGAVQSFRLLAEEQDPAREAAAD*
Ga0137364_100924393	3300012198	Vadose Zone Soil	SANQLAEAADKLTGAVKSFRLLADEEPPREQAAD*
Ga0137364_101833042	3300012198	Vadose Zone Soil	SSANQLAEAADKLTGAVKSFRLLADEEPPREQAAD*
Ga0137364_108289091	3300012198	Vadose Zone Soil	QSASTEEIASSANQLAEAADRLTGAVKSFRLLADEVQQAAD*
Ga0137382_100739483	3300012200	Vadose Zone Soil	SSANQLAEAADKLTGAVKSFRLLADEVPPPERQAAD*
Ga0137382_101606341	3300012200	Vadose Zone Soil	SSANQLAEAADRLTGAVKSCRLLADEQQQQQAAD*
Ga0137382_105524162	3300012200	Vadose Zone Soil	IASSANQLAEAADRLTGAVKSFRLLADEVQQAAD*
Ga0137382_109985292	3300012200	Vadose Zone Soil	TEEIASSANQLAEAADRLTGAVKSFRLLADEVQQAAD*
Ga0137382_111231491	3300012200	Vadose Zone Soil	TQEIAASANQLAEAADKLSDAVKSFRLLADAAAPEPPAREAAD*
Ga0137380_105622781	3300012206	Vadose Zone Soil	QTASTQEIAASANQLAEAADKLSDAVKSFRLLAEQASVPPLGSPTQEAAD*
Ga0137376_100612641	3300012208	Vadose Zone Soil	ANQLAEAADKLTGAVKSFRLLADEVPPPERQAAD*
Ga0137376_101398862	3300012208	Vadose Zone Soil	EEQSASTQEIAASANRLAEAADKLSDAVKSFRLLADAAAPEPPAREAAD*
Ga0137376_106685052	3300012208	Vadose Zone Soil	STQEIAASANQLAEAADKLSDAVKSFRLLADEVAPGPPAREAAD*
Ga0137377_101005285	3300012211	Vadose Zone Soil	SGQEQSASTQEIAASANRLAEAADKLTGAVKSFRLLSDEEQPPPAEREAAD*
Ga0137372_106010462	3300012350	Vadose Zone Soil	SSANQLAEAADRLTGAVKSFRLLADEPQQQQAAD*
Ga0137386_100782491	3300012351	Vadose Zone Soil	EIASSANQLAEASDRLTGAVKSFRLLADEEPPVQREAAD*
Ga0137367_102062311	3300012353	Vadose Zone Soil	SASTEEIASSANQLAEASDRLTGAVKSFRLLADEAPPPERQAAD*
Ga0137366_100358981	3300012354	Vadose Zone Soil	SASTEEIASSANQLAEAADKLQGAVKSFRLLQDEVVEPTRQAAD*
Ga0137366_102091162	3300012354	Vadose Zone Soil	SSANQLADAADKLTGAVKSFRLLADEEPPQRQAAD*
Ga0137368_100966043	3300012358	Vadose Zone Soil	EEIASSANQLAEAADKLTGAVKSFRLFADEEAPPQPQAAD*
Ga0137368_101609811	3300012358	Vadose Zone Soil	EAADRLTGAVKSFRLLADEAAAPPPAPPERQAAG*
Ga0137385_101306903	3300012359	Vadose Zone Soil	EIASSANQLAEAADRLQGAVKTFRLLQDEAVEPTRQAAD*
Ga0137375_1000809413	3300012360	Vadose Zone Soil	STEEIASSANQLAEAADKLTGAVKSFRLFADEEAPPQPQAAD*
Ga0134055_11129122	3300012401	Grasslands Soil	EIASSANQLAEAADRLTGAVKSFRLLADEQQQQQAAD*
Ga0137359_112392481	3300012923	Vadose Zone Soil	SASTEEIASSANQLAEAADKLTGAVKSFRLLADEAPPPQQQAAD*
Ga0137416_101949942	3300012927	Vadose Zone Soil	ASTQEIASSANQLAEAADKLTGAVKTFRLLAEEEQQPPAQAAD*
Ga0134076_100094891	3300012976	Grasslands Soil	ASSANQLAEAADRLTGAVKSFRLLADEVPPPERQAAD*
Ga0157378_116195851	3300013297	Miscanthus Rhizosphere	EEIASSANQLAEAADKLTGAVKSFRLLADEQQDRQQAAD*
Ga0134078_106446241	3300014157	Grasslands Soil	TEEIASSANQLAEAADKLTGAVKSFRLLADEVPPPERQAAD*
Ga0134078_106732922	3300014157	Grasslands Soil	EIASSANQLAEAADRLTGAVKSFRLLADEANPPPEQQAAD*
Ga0134079_107488792	3300014166	Grasslands Soil	STEEIASSANQLAEAADKLTGAVKSFRLLADEEPPRQQAAD*
Ga0134073_100210911	3300015356	Grasslands Soil	ASTEEIASSANQLAEAADKLTGAVKSFRLLADEEPPPQQQAAD*
Ga0134089_100678721	3300015358	Grasslands Soil	EIASSANQLAEASDRLTGAVKSFRLLADEEPPARQAAD*
Ga0134085_102696691	3300015359	Grasslands Soil	QQSASTEEIASSANQLAEAADKLTGAVKSFRLLADEVPPPERQAAD*
Ga0134085_103196731	3300015359	Grasslands Soil	EIASSANQLAEAADKLQGAVKTFRLLQDEAVEPTRQAAD*
Ga0132258_104815854	3300015371	Arabidopsis Rhizosphere	ANQLAEAADRLTGAVKSFRLLADETTPPEQQAAD*
Ga0134074_12000221	3300017657	Grasslands Soil	QSASTEEIASSANQLAEAADKLTGAVKSFRLLADEAPPPERQAAD
Ga0134083_104800201	3300017659	Grasslands Soil	EIASSANQLAEASDRLTGAVKSFRLLADEEPPARQAAD
Ga0184623_100378103	3300018056	Groundwater Sediment	SSANQLAEAADRLTGAVKSFRLLADEQQPQQQAAD
Ga0184623_100718721	3300018056	Groundwater Sediment	TEEIASSANQLAEAADRLTGAVKSFRLLADEQQQQQAAD
Ga0184639_101989973	3300018082	Groundwater Sediment	GEEQSASTQEIASSANQLAEAADRLTGAVKSFRLLADEGQPPEREAAD
Ga0066655_102589212	3300018431	Grasslands Soil	ASTEEIASSANQLAEAADRLTGAVKSFRLLADEVPPPERQAAD
Ga0066667_100101204	3300018433	Grasslands Soil	LEPSSANQLAEAADKLTGAVKSFRLLADEEPPREQAAD
Ga0066667_102234021	3300018433	Grasslands Soil	EIASSANQLAEAADKLTGAVKSFRLLADEVPPPERQAAD
Ga0066667_121577031	3300018433	Grasslands Soil	EEQSASTEEIASSANQLAEAADKLTGAVKSFRLLADEEPPPERQAAD
Ga0066669_104691911	3300018482	Grasslands Soil	TEEIASSANQLAEAADKLTGAVKSFRLLADEEPPPQQQAAD
Ga0193739_10271372	3300020003	Soil	ASTEEIASSANQLAEAAEKLTGAIKSFRLFADDEPATRQAAD
Ga0210379_102633443	3300021081	Groundwater Sediment	STQEVASSANQLAEAADRLTGAVQSFRLLAEEQDPAREAAAD
Ga0179596_103903902	3300021086	Vadose Zone Soil	TEEIASSANQLAEAADRLTGAVKSFRLLADEPQQQQAAD
Ga0193719_102978351	3300021344	Soil	STEEIAASANRLAEAADKLTGAVKSFRLLSDEELPPAQAAD
Ga0126371_135832131	3300021560	Tropical Forest Soil	TQEIASSANQLATAADSLTGAVQTFRLMADETRQEAAD
Ga0209641_104366601	3300025322	Soil	QSASTQEIASSANQLAEASDRLTSAVKSFRLLGENEEPPQREAAD
Ga0209236_10190405	3300026298	Grasslands Soil	ASTEEIASSANQLAEAADKLQGAVKTFRLLQDEAVEPTRQAAD
Ga0209238_11811102	3300026301	Grasslands Soil	QSASTEEIASSANQLAEAADRLTGAVKSFRLLADEQQEQAAD
Ga0209469_10074176	3300026307	Soil	EEIASSANQLAEAADKLTGAVKSFRLLADEEPPPQQQAAD
Ga0209469_10518691	3300026307	Soil	IASSANQLAEASDRLTGAVKSFRLLADEEPPARQAAD
Ga0209265_10971601	3300026308	Soil	EIASSANQLAEAADELTGAVKSFRLLADEEPPRQQAAD
Ga0209761_100335112	3300026313	Grasslands Soil	IASSANRLAEAADKLTGAVKTFRLLAEEEQQPPAQAAD
Ga0209155_11743192	3300026316	Soil	TEEIASSANQLAEAADKLTGAVKSFRLLADEVPPPERQAAD
Ga0209472_11214732	3300026323	Soil	ANQLAEAADRLTGAVKSFRLLADEATPPPEQQAAD
Ga0209267_12901912	3300026331	Soil	ASTEEIASSANQLAEAADKLTGAVKSFRLLADEEPPRQAAD
Ga0209803_10621122	3300026332	Soil	ASSANQLAEASDRLTGAVKSFRLLADEEPPARQAAD
Ga0209057_12006521	3300026342	Soil	SANQLAEAADKLTGAVKSFRLLADEVPPPERQAAD
Ga0209159_11435382	3300026343	Soil	ASTEEIASSANQLAEAADKLTGAVKSFRLLADEEPPPQQQAAD
Ga0209806_11194102	3300026529	Soil	EIASSANQLAEAADKLTGAVKSFRLLADEEPPPERQAAD
Ga0209058_10148927	3300026536	Soil	STEEIASSANQLAEAADRLTGAVKSFRLLADEVPPPERQAAD
Ga0209161_104719512	3300026548	Soil	EEQTASTEEIASSANQLAEAADKLTGAVKTFRLLKDEGQRTEQAAD
Ga0209886_10745921	3300027273	Groundwater Sand	ASTQEIASSANQLAEASDRLTSAVKSFRLLAEDEEPAQRQAAD
Ga0208993_10054681	3300027480	Forest Soil	SANQLAEAADKLTGAVKSFRLLADEEPPPQQQAAD
Ga0209178_11299161	3300027725	Agricultural Soil	SASTQEIASSANQLAEAADKLTGAVKSFRLLADEEPPHQQAAD
Ga0209073_101869512	3300027765	Agricultural Soil	QEQSASTQEIASSANQLAEAADKLTGAVKSFRLLADEESPHQQAAD
Ga0209074_101230371	3300027787	Agricultural Soil	GEEQSASTEEIASSANQLAEAADRLTGAVKSFRLLADEVQPQAAD
Ga0209074_102123252	3300027787	Agricultural Soil	STQEIASSANQLAEAADKLTGAVKSFRLLADEEPPHQQAAD
Ga0209180_101808351	3300027846	Vadose Zone Soil	SASTEEIASSANQLAEAADKLTGAVKTFRLLKDEEQRTEQAAD
Ga0209283_100110097	3300027875	Vadose Zone Soil	ASSANQLAEAADKLTGAVKTFRLLAEEEQQPPAQAAD
Ga0326729_10012465	3300033432	Peat Soil	SSEQQSASTQEIASSANQLAEAADRLQGAVKTFRIVADAT
Ga0326731_10951422	3300033502	Peat Soil	NQLAEAADRLTGAVQSFRLLATDQSPPPPVQEAAD
Ga0364930_0318232_387_521	3300033814	Sediment	ASTEEIASSANRLAEAADKLTGAVKSFRLLADEEQQPPDRAAAD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054717

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences