Metagenome / Metatranscriptome Family F054738

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F054738
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	69 residues
Representative Sequence	VGTFHTHPYRADPAGRAVKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDVATKAGDGSVRHPVPLAVR
Number of Associated Samples	102
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.72 %
% of genes near scaffold ends (potentially truncated)	99.28 %
% of genes from short scaffolds (< 2000 bps)	84.89 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.281 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (27.338 % of family members)
Environment Ontology (ENVO)	Unclassified (69.784 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (72.662 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 6.25% β-sheet: 28.12% Coil/Unstructured: 65.62%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF00171	Aldedh	11.51
PF01547	SBP_bac_1	6.47
PF07511	DUF1525	3.60
PF07690	MFS_1	0.72
PF02554	CstA	0.72
PF06496	DUF1097	0.72
PF00083	Sugar_tr	0.72
PF02374	ArsA_ATPase	0.72
PF00005	ABC_tran	0.72
PF00528	BPD_transp_1	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	11.51
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	11.51
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	11.51
COG1966	Carbon starvation protein CstA (peptide/pyruvate transporter)	Energy production and conversion [C]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	66.19 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.32 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	51.80 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.60 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	43.88 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.88 %
Limnochordia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Limnochordia	0.72 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.72 %
Thermoflexia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermoflexia	0.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	43.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.88 %
Limnochordales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Limnochordia → Limnochordales	0.72 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.72 %
Thermoflexales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermoflexia → Thermoflexales	0.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	43.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.88 %
Limnochordaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Limnochordia → Limnochordales → Limnochordaceae	0.72 %
Thermoflexaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermoflexia → Thermoflexales → Thermoflexaceae	0.72 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	43.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.88 %
Limnochorda	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Limnochordia → Limnochordales → Limnochordaceae → Limnochorda	0.72 %
Thermoflexus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermoflexia → Thermoflexales → Thermoflexaceae → Thermoflexus	0.72 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	0.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	43.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.88 %
Thermoflexus hugenholtzii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermoflexia → Thermoflexales → Thermoflexaceae → Thermoflexus → Thermoflexus hugenholtzii	0.72 %
Limnochorda pilosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Limnochordia → Limnochordales → Limnochordaceae → Limnochorda → Limnochorda pilosa	0.72 %
Cytophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	0.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %
Unclassified	root	N/A	0.72 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10093989	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300002557\|JGI25381J37097_1039526	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	792	Open in IMG/M
3300002558\|JGI25385J37094_10205992	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	526	Open in IMG/M
3300002558\|JGI25385J37094_10208061	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	523	Open in IMG/M
3300002561\|JGI25384J37096_10116662	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	903	Open in IMG/M
3300002562\|JGI25382J37095_10011232	All Organisms → cellular organisms → Bacteria	3361	Open in IMG/M
3300002562\|JGI25382J37095_10203907	All Organisms → cellular organisms → Bacteria → FCB group	598	Open in IMG/M
3300002562\|JGI25382J37095_10213746	All Organisms → cellular organisms → Bacteria → FCB group	582	Open in IMG/M
3300002908\|JGI25382J43887_10342832	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	636	Open in IMG/M
3300002911\|JGI25390J43892_10172149	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	508	Open in IMG/M
3300002912\|JGI25386J43895_10163272	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	558	Open in IMG/M
3300002912\|JGI25386J43895_10192512	All Organisms → cellular organisms → Bacteria → FCB group	512	Open in IMG/M
3300005167\|Ga0066672_10678594	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	662	Open in IMG/M
3300005174\|Ga0066680_10035469	All Organisms → cellular organisms → Bacteria	2851	Open in IMG/M
3300005177\|Ga0066690_10024127	All Organisms → cellular organisms → Bacteria	3441	Open in IMG/M
3300005177\|Ga0066690_10234770	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1227	Open in IMG/M
3300005186\|Ga0066676_10494525	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	830	Open in IMG/M
3300005187\|Ga0066675_10210449	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1371	Open in IMG/M
3300005440\|Ga0070705_100062707	All Organisms → cellular organisms → Bacteria	2214	Open in IMG/M
3300005446\|Ga0066686_10206758	All Organisms → cellular organisms → Bacteria → FCB group	1316	Open in IMG/M
3300005451\|Ga0066681_10201734	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1190	Open in IMG/M
3300005454\|Ga0066687_10280954	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	938	Open in IMG/M
3300005468\|Ga0070707_102282114	All Organisms → cellular organisms → Bacteria → FCB group	509	Open in IMG/M
3300005518\|Ga0070699_101849591	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	552	Open in IMG/M
3300005536\|Ga0070697_101195279	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	677	Open in IMG/M
3300005546\|Ga0070696_100754468	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	797	Open in IMG/M
3300005549\|Ga0070704_100263977	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1420	Open in IMG/M
3300005553\|Ga0066695_10091075	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
3300005556\|Ga0066707_10013444	All Organisms → cellular organisms → Bacteria	4131	Open in IMG/M
3300005556\|Ga0066707_10446532	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	839	Open in IMG/M
3300005560\|Ga0066670_10953227	All Organisms → cellular organisms → Bacteria → FCB group	523	Open in IMG/M
3300005561\|Ga0066699_11222652	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	515	Open in IMG/M
3300005566\|Ga0066693_10019527	All Organisms → cellular organisms → Bacteria	2035	Open in IMG/M
3300006031\|Ga0066651_10332722	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	815	Open in IMG/M
3300006034\|Ga0066656_11077136	All Organisms → cellular organisms → Bacteria → FCB group	516	Open in IMG/M
3300006791\|Ga0066653_10236907	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	929	Open in IMG/M
3300006791\|Ga0066653_10555177	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300006796\|Ga0066665_10589332	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	897	Open in IMG/M
3300006796\|Ga0066665_11094815	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	607	Open in IMG/M
3300006797\|Ga0066659_11888430	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300006800\|Ga0066660_10012569	All Organisms → cellular organisms → Bacteria	4637	Open in IMG/M
3300006800\|Ga0066660_10527437	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	992	Open in IMG/M
3300006800\|Ga0066660_11235570	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	585	Open in IMG/M
3300006804\|Ga0079221_10165623	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300007076\|Ga0075435_100436371	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1129	Open in IMG/M
3300009012\|Ga0066710_100350179	All Organisms → cellular organisms → Bacteria	2184	Open in IMG/M
3300009012\|Ga0066710_100547345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1751	Open in IMG/M
3300009012\|Ga0066710_101562261	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1014	Open in IMG/M
3300009012\|Ga0066710_104431827	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300009038\|Ga0099829_10502538	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1007	Open in IMG/M
3300009038\|Ga0099829_11056037	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	673	Open in IMG/M
3300009038\|Ga0099829_11093379	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	661	Open in IMG/M
3300009038\|Ga0099829_11654224	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300009089\|Ga0099828_10098680	All Organisms → cellular organisms → Bacteria	2522	Open in IMG/M
3300009089\|Ga0099828_10107751	All Organisms → cellular organisms → Bacteria	2419	Open in IMG/M
3300009089\|Ga0099828_11118421	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	700	Open in IMG/M
3300009089\|Ga0099828_11934355	All Organisms → cellular organisms → Bacteria → FCB group	517	Open in IMG/M
3300009089\|Ga0099828_11979081	All Organisms → cellular organisms → Bacteria → FCB group	510	Open in IMG/M
3300009137\|Ga0066709_100117716	All Organisms → cellular organisms → Bacteria	3310	Open in IMG/M
3300009137\|Ga0066709_100580637	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1593	Open in IMG/M
3300009137\|Ga0066709_101352448	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1040	Open in IMG/M
3300009137\|Ga0066709_103725780	All Organisms → cellular organisms → Bacteria → FCB group	553	Open in IMG/M
3300009137\|Ga0066709_103900315	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	542	Open in IMG/M
3300009143\|Ga0099792_10005808	All Organisms → cellular organisms → Bacteria → Proteobacteria	4948	Open in IMG/M
3300010301\|Ga0134070_10111538	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	960	Open in IMG/M
3300010301\|Ga0134070_10134798	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	878	Open in IMG/M
3300010320\|Ga0134109_10049382	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1390	Open in IMG/M
3300010321\|Ga0134067_10452266	All Organisms → cellular organisms → Bacteria → FCB group	524	Open in IMG/M
3300010322\|Ga0134084_10092389	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	955	Open in IMG/M
3300010323\|Ga0134086_10179033	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	784	Open in IMG/M
3300010329\|Ga0134111_10561783	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	507	Open in IMG/M
3300010335\|Ga0134063_10467551	All Organisms → cellular organisms → Bacteria → FCB group	627	Open in IMG/M
3300010336\|Ga0134071_10001691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermoflexia → Thermoflexales → Thermoflexaceae → Thermoflexus → Thermoflexus hugenholtzii	8005	Open in IMG/M
3300010336\|Ga0134071_10118686	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300010371\|Ga0134125_10270528	All Organisms → cellular organisms → Bacteria	1887	Open in IMG/M
3300011270\|Ga0137391_11065961	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	655	Open in IMG/M
3300011271\|Ga0137393_10937615	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	738	Open in IMG/M
3300012096\|Ga0137389_11487476	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	573	Open in IMG/M
3300012207\|Ga0137381_10431222	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1151	Open in IMG/M
3300012207\|Ga0137381_11721237	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	517	Open in IMG/M
3300012211\|Ga0137377_11659845	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	561	Open in IMG/M
3300012285\|Ga0137370_10172263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1260	Open in IMG/M
3300012350\|Ga0137372_10436846	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	984	Open in IMG/M
3300012359\|Ga0137385_11308641	All Organisms → cellular organisms → Bacteria → FCB group	587	Open in IMG/M
3300012373\|Ga0134042_1144247	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300012398\|Ga0134051_1291729	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	539	Open in IMG/M
3300012683\|Ga0137398_10352465	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300012918\|Ga0137396_10154161	All Organisms → cellular organisms → Bacteria	1674	Open in IMG/M
3300012972\|Ga0134077_10130151	All Organisms → cellular organisms → Bacteria → FCB group	993	Open in IMG/M
3300012975\|Ga0134110_10119636	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1074	Open in IMG/M
3300012976\|Ga0134076_10104352	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300014154\|Ga0134075_10032070	All Organisms → cellular organisms → Bacteria	2137	Open in IMG/M
3300014154\|Ga0134075_10060035	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1579	Open in IMG/M
3300014154\|Ga0134075_10507114	All Organisms → cellular organisms → Bacteria → FCB group	541	Open in IMG/M
3300014157\|Ga0134078_10517694	All Organisms → cellular organisms → Bacteria	557	Open in IMG/M
3300014166\|Ga0134079_10429058	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	621	Open in IMG/M
3300015054\|Ga0137420_1019296	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300015241\|Ga0137418_10029950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Limnochordia → Limnochordales → Limnochordaceae → Limnochorda → Limnochorda pilosa	5042	Open in IMG/M
3300015358\|Ga0134089_10069512	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1312	Open in IMG/M
3300015358\|Ga0134089_10103477	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1093	Open in IMG/M
3300015358\|Ga0134089_10404277	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	584	Open in IMG/M
3300015359\|Ga0134085_10049223	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1683	Open in IMG/M
3300015359\|Ga0134085_10391950	All Organisms → cellular organisms → Bacteria → FCB group	622	Open in IMG/M
3300017654\|Ga0134069_1129469	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	835	Open in IMG/M
3300017656\|Ga0134112_10102533	All Organisms → cellular organisms → Bacteria	1076	Open in IMG/M
3300017659\|Ga0134083_10009567	All Organisms → cellular organisms → Bacteria	3215	Open in IMG/M
3300017659\|Ga0134083_10173951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	880	Open in IMG/M
3300018468\|Ga0066662_10160933	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1715	Open in IMG/M
3300018468\|Ga0066662_12325051	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	563	Open in IMG/M
3300024187\|Ga0247672_1011450	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1407	Open in IMG/M
3300025922\|Ga0207646_11385699	All Organisms → cellular organisms → Bacteria → FCB group	612	Open in IMG/M
3300026277\|Ga0209350_1030240	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300026277\|Ga0209350_1083067	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	851	Open in IMG/M
3300026296\|Ga0209235_1027009	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3002	Open in IMG/M
3300026298\|Ga0209236_1080232	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1515	Open in IMG/M
3300026298\|Ga0209236_1236455	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300026301\|Ga0209238_1161367	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	670	Open in IMG/M
3300026306\|Ga0209468_1094105	All Organisms → cellular organisms → Bacteria → FCB group	977	Open in IMG/M
3300026310\|Ga0209239_1021754	All Organisms → cellular organisms → Bacteria	3168	Open in IMG/M
3300026313\|Ga0209761_1291177	All Organisms → cellular organisms → Bacteria → FCB group	575	Open in IMG/M
3300026318\|Ga0209471_1130351	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cytophagaceae	1061	Open in IMG/M
3300026322\|Ga0209687_1068938	Not Available	1150	Open in IMG/M
3300026326\|Ga0209801_1288108	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300026332\|Ga0209803_1016907	All Organisms → cellular organisms → Bacteria	3685	Open in IMG/M
3300026333\|Ga0209158_1058223	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1555	Open in IMG/M
3300026335\|Ga0209804_1000873	All Organisms → cellular organisms → Bacteria	21435	Open in IMG/M
3300026343\|Ga0209159_1269184	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	519	Open in IMG/M
3300026523\|Ga0209808_1136560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	976	Open in IMG/M
3300026528\|Ga0209378_1142077	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	982	Open in IMG/M
3300026532\|Ga0209160_1238708	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	623	Open in IMG/M
3300026548\|Ga0209161_10152603	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1333	Open in IMG/M
3300026550\|Ga0209474_10117424	All Organisms → cellular organisms → Bacteria	1769	Open in IMG/M
3300027655\|Ga0209388_1204584	All Organisms → cellular organisms → Bacteria	546	Open in IMG/M
3300027846\|Ga0209180_10338187	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	859	Open in IMG/M
3300027875\|Ga0209283_10529945	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	755	Open in IMG/M
3300027882\|Ga0209590_10517264	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300028536\|Ga0137415_10153949	All Organisms → cellular organisms → Bacteria	2135	Open in IMG/M
3300028536\|Ga0137415_11453236	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300031720\|Ga0307469_12131518	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	545	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.28%
Host-Associated	Host-Associated	0.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.28%
Plants	Host-Associated → Plants	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.53%
Loam	Environmental → Terrestrial → Soil → Loam	5.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	48.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.44%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	27.34%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	21.58%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	20.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.04%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012373	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_100939891	3300001661	Forest Soil	RADAAGHALKERGLSVLDLKTFAAAPDLVTVVMWDLDSLDVATKAVDGSVRHPAAVQIR*
JGI25381J37097_10395261	3300002557	Grasslands Soil	CDGVERLVGTFHTHPYRADSAGRAVKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDIATKAGDGSVRHPVPLAVR*
JGI25385J37094_102059922	3300002558	Grasslands Soil	WHTHPYRAGPDGRALKERGLSALDLETFASARDLVTVVMWDVDSLDVAAKGPDGSVRHPAPLTLR*
JGI25385J37094_102080611	3300002558	Grasslands Soil	GPDGRALKEPGLSALDLETFASARDLVTLVMWDMDSIDVAAKAPDGSVRHPVPLSPR*
JGI25384J37096_101166622	3300002561	Grasslands Soil	RLVGTFHTHPYRADPAGRAVKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDVATKAGDGSVRHPVPLAVR*
JGI25382J37095_100112324	3300002562	Grasslands Soil	RFVGTWHTHPYRAGPDGRALKERGLSALDLETFASARDLVTVVMWDVDSLDVAAKGPDGSVRHPAPLTLR*
JGI25382J37095_102039071	3300002562	Grasslands Soil	DLVGTWHTHPYRADAAGRAQKEPGLSALDLESFAAARDLVTIVMWDLDSLDAAMKTPDGALRHPAPVAVR*
JGI25382J37095_102137462	3300002562	Grasslands Soil	THPYRADATGRAIKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDVATKAGDGSVRHPVPLAVR*
JGI25382J43887_103428322	3300002908	Grasslands Soil	VGTFHTHPYRADPAGRAVKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDVATKAGDGSVRHPVPLAVR*
JGI25390J43892_101721492	3300002911	Grasslands Soil	VERLVGTFHTHPYRADAAGRAVKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDIATKAGDGSVRHPVPLAVR*
JGI25386J43895_101632722	3300002912	Grasslands Soil	FVGTWHTHPYRAGPDGRALKERGLSALDLETFASARDLVTVVMWDVDSLDVAAKGPDGSVRHPAPLTLR*
JGI25386J43895_101925121	3300002912	Grasslands Soil	AGRAVKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDVATKAGDGSVRHPVPLAVR*
Ga0066672_106785942	3300005167	Soil	GTFHTHPYRADSAGRALKERGLSAMDLETFAASRDLLAVVMWDRDSLDVATKAEDGSVRHPVPVEVR*
Ga0066680_100354693	3300005174	Soil	TAANLKQLQFAVAGSCDDVDQLVGTFHTHPYRADSGGRPVKERGLSPMDLATFAATRDEVAMVMWDLDSLDVAAKAVDGSVRHPASLSVNP*
Ga0066690_100241271	3300005177	Soil	LVGTFHTHPYRADSAGRALKERGLSARDLETFAASRDLLAVVMWDHDSLDVATKAADGSVRHPVPVEVR*
Ga0066690_102347702	3300005177	Soil	VDHFVGTWHTHPYRAGPDGGALKERGLSALDLATFAAARDLITVVMWDMDSIDVAAKAPDGSVRHPVALSPR*
Ga0066676_104945252	3300005186	Soil	LVGTFHTHPYRADAEGHAIKEPGLSAMDLRTFATGTDLVTMVMWDLDSLDVAIKAPDGSVRYPVRLTVR*
Ga0066675_102104491	3300005187	Soil	HTHPYRADSAGRAVKERGLSPMDLRTFTQAPDVVTIVMWDLDSLDIAAKSPDGSVLHPVPLTVR*
Ga0070705_1000627071	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	RLVGTFHTHPYRADSAGRAVKERGLSAMDLKTFTAAPDVVTMVMWDLDSLDVATKAADGSVRHPMPLTVR*
Ga0066686_102067582	3300005446	Soil	VGTFHTHPYRADATGRAIKERGLSAMDLKTFAAASDMVTMVMWDLDSLDLATKAGDGSVRHPVPLAVR*
Ga0066681_102017342	3300005451	Soil	GVPDLVGTFHTHPYRADSAGRAVKERGLSPMDLRTFTQAPDVVTIVMWDLDSLDIAAKSPDGSVLHPVPLTVR*
Ga0066687_102809542	3300005454	Soil	GPDGRALKERGLSALDLETFAAARDLITLVMWDMDSIDVAAKAPDGSVRHPVPVSTR*
Ga0070707_1022821142	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	ERGLSTMDLRTFAAATDLVTMVMWDLDSLDVAIKTPDGSVRHPAPLTVR*
Ga0070699_1018495912	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	GRAVKERGLSAMDLKTFAAASDMVTMVMWDLDSLDVATKAGDGSVRHPVPLAVR*
Ga0070697_1011952791	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	FHTHPYRADAAGRAVKERGLSAMDLKTFAAASDMVTMVMWDLDSLDVATKAGDGSVRHPVPLAVR*
Ga0070696_1007544681	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	FHTHPYRADAAGRAVKERGLSAMDLKTFAATSDMVTMVMWDLDSLDVATKAGDGSVRHPVPLAVR*
Ga0070704_1002639771	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	DAAGRAVKERGLSAMDLKTFAAASDMVTMVMWDLDSLDVATKAGDGSVRHPVPLAVR*
Ga0066695_100910753	3300005553	Soil	RQLQFAVAGNCTQVDRLVGTWHTHPYRAGPDGRALKERGLSALDLETFAAARDLITVVMWDMDSIDVAAKAPDGSVRHPVPLSLR*
Ga0066707_100134444	3300005556	Soil	VDQLVGTFHTHPYRADSGGRPVKERGLSPMDLATFAATRDEVAMVMWDLDSLDVAAKAVDGSVRHPASLSVNP*
Ga0066707_104465322	3300005556	Soil	VDQLVGTFHTHPYRADSGGRPVKERGLSPMDLATFAATRDQVAMVMWDLDSLDVAAKALDGSVRHPVSFTVNP*
Ga0066670_109532271	3300005560	Soil	DDVDQLVGTFHTHPYRADSGGRPVKERGLSPMDLATFAATRDEVAMVMWDLDSLDVAAKAADGSVRHPASLAVH*
Ga0066699_112226521	3300005561	Soil	AGNCDQVDRLVGTWHTHPYRAGPDGRALKERGLSALDLETFAAARDLITLVMWDMDSIDVAAKAPDGSVRHPVPLSPR*
Ga0066693_100195273	3300005566	Soil	HTHPYRADSAGRALKERGLSAKDLETFAASRDLVAVVMWDRDSLDVTTKAEDGSVRHPAPLAVH*
Ga0066651_103327222	3300006031	Soil	HFVGTWHTHPYRAGPDGRALKEPGLSALDLETFASARDLVTLVMWDMDSIDVAAKAPDGSVRHPVPLSPR*
Ga0066656_110771362	3300006034	Soil	VDQLVGTFHTHPYRADSGGRPVKERGLSPMDLATFAATRDQVAMVMWDLDSLDVAAKAVDGSVRHPVSFTVNP*
Ga0066653_102369072	3300006791	Soil	GTWHTHPYRAGPDGRALKERGLSALDLETFASARDLVTVVMWDVDSLDVAAKGPDGSVRHPAPLTLR*
Ga0066653_105551771	3300006791	Soil	GVEHRVGTFHTHPYRADSAGRAVKERGLSAMDLKTFAAATDLVTIVMWDLDSLDVATKAVDGSVRHPVPLAVR*
Ga0066665_105893322	3300006796	Soil	PYRADSAGRAVKERGLSPMDLRTFTQAPDVVTIVMWDLDSLDIAAKSPDGSVLHPVPLTVR*
Ga0066665_110948151	3300006796	Soil	GLSALDLETFAAARDLVTVVMWDVDSLDVAAKRPDGSVRHPAPLTLR*
Ga0066659_118884302	3300006797	Soil	VGTFHTHPYRADSAGRALKERGLSARDLETFAASRDLLAVVMWDHDSLDVATKAEDGSVRHPVPVEVR*
Ga0066660_100125691	3300006800	Soil	TFHTHPYRADSAGRALKERGLSAKDLETFAASRDLVAVVMWDRDSLDVATKAEDGSVRHPAPLAVR*
Ga0066660_105274372	3300006800	Soil	QLQFAVAGNCDQVDHLVGTWHTHPYRAGPDGGALKERGLSALDLATFAAARDLITVVMWDMDSIDVAAKAPDGSVRHPVALSPR*
Ga0066660_112355701	3300006800	Soil	TFHTHPYRADSAGRALKERGLSAMDLETFAASRDLLAVVMWDHDSLDVATKAADGSVRHPVPVEVR*
Ga0079221_101656231	3300006804	Agricultural Soil	RLVGTFHTHPYRADPAGQAVKERGLSPMDLRTFAAAPDLVSMVMWDLDSLDAATKAVDGSVRHPATVRVR*
Ga0075435_1004363711	3300007076	Populus Rhizosphere	ADAAGRAVKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDVATKGGDGSVRHPVPLAVR*
Ga0066710_1003501791	3300009012	Grasslands Soil	DVDQLVGTFHTHPYRADSGGRPVKERGLSPMDLATFAATRDEVAMVMWDLDSLDVAAKAVDGSVRHPASLSVNP
Ga0066710_1005473451	3300009012	Grasslands Soil	AGPDGRALKERGLSALDLETFAAARDLITLVMWDMDSIDVAAKAPDGTVRHPAPLAVR
Ga0066710_1015622611	3300009012	Grasslands Soil	DVDQLVGTFHTHPYRADSGGRPVKERGLSPMDLATFAATRDQVAMVMWDLDSLDVAAKALDGSVRHPVSFTVNP
Ga0066710_1044318271	3300009012	Grasslands Soil	HPYRADPAGRAVKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDVATKAGDGSVRHPVPLAVR
Ga0099829_105025382	3300009038	Vadose Zone Soil	ERLVGTFHTHPYRADATGRAVKERGLSAMDLKTFATASDMVTMVMWDLDSLDVATKAGDGSVRHPVPLAVR*
Ga0099829_110560371	3300009038	Vadose Zone Soil	PLKERGLSTLDLETFAHAPDLVALVMWDRDSLDGATKAWDGSVRHPAPLTVR*
Ga0099829_110933791	3300009038	Vadose Zone Soil	PLKERGLSTLDLETFAHAPDLVALVMWDRDSLDGATKAWDGGVRHPAPLTVR*
Ga0099829_116542241	3300009038	Vadose Zone Soil	HTHPYRADPAGHAVKERGLSPLDLRTFATASDLITMVMWDLDSLDTATKAMDGSVRHPAAVQIR*
Ga0099828_100986801	3300009089	Vadose Zone Soil	TFHTHPYRADATGRAVKERGLSAMDLKTFATASDMVTMVMWDLDSLDVATKAGDGSVRHPVPLAVR*
Ga0099828_101077514	3300009089	Vadose Zone Soil	PYRADPAGGAVKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDVATKAVDGSLRHPMTFSVR*
Ga0099828_111184211	3300009089	Vadose Zone Soil	ADPAGRALKERGLSTLDLETFAHAPDLVALVMWDRDSLDGATKAWDGSVRHPAPLTVR*
Ga0099828_119343551	3300009089	Vadose Zone Soil	VAQLVGTFHTHPYRADPAGRPLKERGLSTLDLETFAQAPDLVTLVMWDRDSLDGATKAWDGSVRHPAPLTVR*
Ga0099828_119790811	3300009089	Vadose Zone Soil	VAQLVGTFHTHPYRADPAGRPLKERGLSTLDLETFAQAPDLVALVMWDRDSLDGATKAWDGSVRHPAPLTVR*
Ga0066709_1001177163	3300009137	Grasslands Soil	AVAGNCDQVDHLVGTWHTHPYRAGPDGRALKERGLSALDLETFAAARDLITLVMWDMDSIDVAAKAPDGTVRHPAPLAVR*
Ga0066709_1005806371	3300009137	Grasslands Soil	VGTWHTHPYRAGPDGRALKERGLSALDLDTFAAARDLITLVMWDMDSIDVAAKAPDGSVRHPVPLSPP*
Ga0066709_1013524482	3300009137	Grasslands Soil	DVDQLVGTFHTHPYRADSGGRPVKERGLSPMDLATFAATRDEVAMVMWDLDSLDVAAKAVDGSVRHPASLSVNP*
Ga0066709_1037257802	3300009137	Grasslands Soil	DVDQLVGTFHTHPYRADSGGRPVKERGLSPMDLATFAATRDQVAMVMWDLDSLDVAAKALDGSVRHPVSFTVNP*
Ga0066709_1039003151	3300009137	Grasslands Soil	LVGTWHTHPYRAGPDGRALKERGLSALDLETFAAARDLITLVMWDMDSIDVAAKAPDGSVRHPVPVSPR*
Ga0099792_100058081	3300009143	Vadose Zone Soil	GRAVKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDLATKAVDGSVRHPAAVQIR*
Ga0134070_101115382	3300010301	Grasslands Soil	AGPDGRALKERGLSALDLETFASARDLVTVVMWDVDSLDVAAKGPDGSVRHPAPLTLR*
Ga0134070_101347981	3300010301	Grasslands Soil	FVGTWHTHPYRAGPDGRALKEPGLSALDLETFASARDLVTLVMWDMDSIDVAAKAPDGSVRHPVPLSPR*
Ga0134109_100493822	3300010320	Grasslands Soil	VKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDVATKAGDGSVRHPVPLAVR*
Ga0134067_104522661	3300010321	Grasslands Soil	QLQFAVAGDCEGVPDLVGTFHTHPYRADSAGRAVKERGLSPMDLRTFTQAPDVVTIVMWDLDSLDIAAKSPDGSVLHPVPLTVR*
Ga0134084_100923892	3300010322	Grasslands Soil	LKQLQFAVAGDCEGVPDLVGTFHTHPYRADSAGRAVKERGLSPMDLRTFTQAPDVVTIVMWDLDSLDIAAKSPDGSVLHPVPLTVR*
Ga0134086_101790333	3300010323	Grasslands Soil	DQLVGTFHTHPYRADSGGRAVKERGLSPMDLATFAAARDRVAMVMWDLDSLDVAAKAADGSVRHPASLAVH*
Ga0134111_105617832	3300010329	Grasslands Soil	QLVGTFHTHPYRADSGGRAVKERGLSPMDLATFAATRDEVAMVMWDLDSLDVAAKAVDGSVRHPASLSVNP*
Ga0134063_104675511	3300010335	Grasslands Soil	VAGDCDGVERLVGTFHTHPYRADAAGRAVKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDIATKAGDGSVRHPVPLAVR*
Ga0134071_1000169110	3300010336	Grasslands Soil	GVPDLVGTWHTHPYRADAAGRAQKEPGLSALDLESFAAARDLVTIVMWDLDSLDAAMKTPDGALRHPAPVAVR*
Ga0134071_101186862	3300010336	Grasslands Soil	VERLVGTFHTHPYRADPAGRAVKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDLATKAVDGSVRHPAAVQIR*
Ga0134125_102705281	3300010371	Terrestrial Soil	RLVGTFHTHPYRADSAGRAVKERGLSAVDLKTFTAAPDIVTMVMWDLDSLDVATKAADGSVRHPMPLTVR*
Ga0137391_110659611	3300011270	Vadose Zone Soil	GNCDGVAQLVGTFHTHPYRADPAGRPLKERGLSTLDLETFAQAPDLVTLVMWDRDSLDGATKAWDGSVRHPAPLTVR*
Ga0137393_109376151	3300011271	Vadose Zone Soil	VAQLVGTFHTHPYRADPAGRPLKERGLSTLDLETFAHAPDLVALVMWDRDSLDGATKAWDGGVRHPAPLTVR*
Ga0137389_114874761	3300012096	Vadose Zone Soil	RADGGGRATKERGLSAMYLETFAAAPDLVAMVMWDLDSLDMATKAVDGSVRHPVAVQIR*
Ga0137381_104312222	3300012207	Vadose Zone Soil	VAGSCDDVDQLVGTFHTHPYRADSGGRPVKERGLSPMDLATFAATRDEVAMVMWDLDSLDVAAKAVDGSVRHPASLSVNP*
Ga0137381_117212372	3300012207	Vadose Zone Soil	VARLVGTFHTHPYRADSAGRALKERGLSAMDLETFAASRDLLAVVMWDHDSLDVATKAADGSVRHPVPVEVR*
Ga0137377_116598451	3300012211	Vadose Zone Soil	DCEGIERLVGSFHTHPYRADSAGHALKERGLSPMDLKTFAAAPDLVTMVMWDLDSLDAATKAVDGSVRHPAAVQVR*
Ga0137370_101722632	3300012285	Vadose Zone Soil	SVAGLVGTFHTHPYRADSAGRALKERGLSAMDLETFAASRDLLAVVMWDRDSLDVATKAEDGRVRHPAPLAVR*
Ga0137372_104368461	3300012350	Vadose Zone Soil	EQLVGAFHTHPYRADSTGRAVKERGLSAMDLRTFGAAPDIVTMVMWDLDSIDVAVKGPDGSVRHPLPLSVR*
Ga0137385_113086411	3300012359	Vadose Zone Soil	DCVGVERLVGTFHTHPYRADATGRAIKERGLSALALKTFATASDMVTMVMWDLDSLDVATKARDGSVRHPVPLAVR*
Ga0134042_11442473	3300012373	Grasslands Soil	PYRADAAGRAVKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDVAIKAVDGSVRHPVPLAVR*
Ga0134051_12917291	3300012398	Grasslands Soil	VAGNCDQVDHLVGTWHTHPYRAGPDGRALKKRGLSALDLETFAAARDLITLVMWDMDSIDVAAKAPDGSVRHPVPLAMR*
Ga0137398_103524651	3300012683	Vadose Zone Soil	VERLVGSFHTHPYRADPAGRAVKERGLSAMDLKTFAAAPDMVTMVMWDLDSLEAATKAVDGSVRHPAAVQIR*
Ga0137396_101541611	3300012918	Vadose Zone Soil	HTHPYRADAAGHALKERGLSALDLKTFAAAPDLVTVVMWDLDSLDVATKAVDGSVRHPAAVQIR*
Ga0134077_101301513	3300012972	Grasslands Soil	QFAVAGSCDGVAQFVGTWHTHPYRADSGGRALKERELSRRDLETFASARDLVTIVMWDSDSLDAAAKRRDGTLLHPVPLAVR*
Ga0134110_101196362	3300012975	Grasslands Soil	DCDGVERLVGTFHTHPYRADPAGRALKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDVATKAGDGSVRHPVPLAVR*
Ga0134076_101043521	3300012976	Grasslands Soil	PYRADPNGQAVKERGLSAMDLETFAAARDLVSVVMWDVDSLDAAAKGPDGSVRHPAPIILR*
Ga0134075_100320701	3300014154	Grasslands Soil	AGPDGRALKERGLSALDLETFAAARDLITVVMWDMDSIDVAAKAPDGSVRHPVPLSLR*
Ga0134075_100600352	3300014154	Grasslands Soil	AGPDGRALKERGLSALDLETFAAARDLVTVVVWDVDSLDVAAKRPDGSVRHPAPLTLR*
Ga0134075_105071142	3300014154	Grasslands Soil	AGDCEGVPDLVGTFHTHPYRADSAGRAVKERGLSPMDLRTFTQAPDVVTIVMWDLDSLDIAAKSPDGSVLHPVPLTVR*
Ga0134078_105176942	3300014157	Grasslands Soil	AGDCDGVEHRVGTFHTHPYRADSAGRAVKERGLSAMDLKTFAAATDLVTIVMWDLDSLDVATKAVDGSVRHPVPLAVR*
Ga0134079_104290582	3300014166	Grasslands Soil	YRAGPDGRALKERGLSALDLDTFAAARDLITLVMWDMDSIDVAAKAPDGSVRHPVPLSPP
Ga0137420_10192961	3300015054	Vadose Zone Soil	CDGVERLVGTFHTHPYRADSAGRAVKERGLSPLDLRTFATASDLVTMVMWDLDSLDVATKAVDGSVRHPAAVQVR*
Ga0137418_100299501	3300015241	Vadose Zone Soil	VAGDCEGVERLVGSFHTHPYRADTAGHALKERGLSALDLKTFAAAPDLVTVVMWDLDSLDVATKAVDGSVRHPAAVQIH*
Ga0134089_100695122	3300015358	Grasslands Soil	VGTWHTHPYRAGPDGRALKERGLSALDLETFAAARDLVTVVVWDVDSLDVAAKRPDGSVRHPAPLTLR*
Ga0134089_101034771	3300015358	Grasslands Soil	QLQFAVAGSCDDVDQLVGTFHTHPYRADSGGRPVKERGLSPMDLATFAATRDQVAMVMWDLDSLDVAAKALDGSVRHPVSFTVNP*
Ga0134089_104042771	3300015358	Grasslands Soil	ADSAGRAVKERGLSTMDLETFAAATDLVTMVMWDLDSLDVATKAVDGRVRHPVAVQVR*
Ga0134085_100492232	3300015359	Grasslands Soil	PYRAGPDGRALKERGLSALDLETFAAARDLITVVMWDMDSIDVAAKAPDGSVRHPVPLSLR*
Ga0134085_103919502	3300015359	Grasslands Soil	DQLVGTFHTHPYRADSGGRPVKERGLSPMDLATFAAARDRVAMVMWDLDSLDVAAKAADGSVRHPVSLTVDP*
Ga0134069_11294692	3300017654	Grasslands Soil	YRADSGGRPVKERGLSPMDLATFAATRDEVAMVMWDLDSLDVAAKAVDGSVRHPASLSVN
Ga0134112_101025332	3300017656	Grasslands Soil	RLVGTFHTHPYRADPAGRAVKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDVATKAVDGSVRHPAAVQIR
Ga0134083_100095671	3300017659	Grasslands Soil	GRALKERGLSALDLETFAAARDLVTVVMWDVDSLDVAAKRPDGSVRHPAPLTLR
Ga0134083_101739511	3300017659	Grasslands Soil	HPYRADPAGRAVKERGLSAMDLKTFAAAPDVVTMVMWDLDSLDVATKAGDGSVRHPAAVRVR
Ga0066662_101609332	3300018468	Grasslands Soil	AGNWGQVRHLGGTVHPHPERGGPGRPGLEGRRLFGLGFETFAAARDLITLVMWDMDSIDVAAKAPDGSVRHPVPLSPR
Ga0066662_123250511	3300018468	Grasslands Soil	THPHRADSGGRPVKERGRSPMDLASFAATRDEVAMVMWDLDSLDVAAKAVDGSVRHPASLSVNP
Ga0247672_10114502	3300024187	Soil	VDRLVGTFHTHPYRADSAGHALKERGLSTMDLRTFAAATDLVTMVMWDLDSLDVAIKAPDGSVRHPAPVTVR
Ga0207646_113856992	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	FAVAGNCEHVDRLVGTFHTHPYRADSAGHPLKERGLSTMDLRTFAAATDLVTMVMWDLDSLDVAIKTPDGSVRHPAPLTVR
Ga0209350_10302401	3300026277	Grasslands Soil	DCEGIERLVGSFHTHPYRADSAGHALKERGLSPMDLKTFAAAPDLVTMVMWDLDSLDAATKAVDGSVRHPAAVQVR
Ga0209350_10830671	3300026277	Grasslands Soil	NQVDRLVGTWHTHPYRAGPDGRALKERGLSALDLETFAAARDLITVVMWDMDSIDVAAKAPDGSVRHPVPLSLR
Ga0209235_10270091	3300026296	Grasslands Soil	NCTQVDRLVGTWHTHPYRAGPDGRALKERGLSALDLETFAAARDLITVVMWDMDSIDVAAKAPDGSVRHPVPLSLR
Ga0209236_10802322	3300026298	Grasslands Soil	PYRADSAGRALKERGLSAMDLKTFAAGPDMVTMVMWDLDSLDVATKAGDGSVRHPVPLAV
Ga0209236_12364551	3300026298	Grasslands Soil	HPYRADAAGRAVKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDVAIKAVDGSVRHPVPLAVR
Ga0209238_11613671	3300026301	Grasslands Soil	RDDSVGRALKERGLSTMDLETFAGSSDLVVVVMWDRDSLDVATKAEDGSVRHPASVEVR
Ga0209468_10941051	3300026306	Soil	FVGTWHTHPYRADSEGRALKERELSRRDLETFASARDLVTIVMWDSDSLDAAAKRRDGTLLHPVPLAVR
Ga0209239_10217543	3300026310	Grasslands Soil	RLVGTWHTHPYRAGPDGRALKERGLSALDLETFAAARDLITLVMWDMDSIDVAAKAPDGSVRHPAPLAVR
Ga0209761_12911772	3300026313	Grasslands Soil	THPYRADPAGRAVKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDVATKAGDGSVRHPVPLAVR
Ga0209471_11303513	3300026318	Soil	AGRAVKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDVATKAGDGSVRHPVPLAVR
Ga0209687_10689381	3300026322	Soil	DSVAGLVGTFHTHPYRADSAGRALKEHGLSAMDLETFAASRDLLAVVMWDRDSLDVATKAEDGRVRHPAPLAVR
Ga0209801_12881081	3300026326	Soil	TFHTHPYRADPAGRAVKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDVATKAGDGSVRHPAAVRVR
Ga0209803_10169071	3300026332	Soil	TWHTHPYRADAAGRAQKEPGLSALDLESFAAARDLVTIVMWDLDSLDAAMKTPDGALRHPAPVAVR
Ga0209158_10582232	3300026333	Soil	QVDHLVGTWHTHPYRAGPDGRALKERGLSALDLETFAAARDLITLVMWDMDSIDVAAKAPDGSVRHPVPLSPR
Ga0209804_10008731	3300026335	Soil	GNCDQVDHLVGTWHTHPYRAGPDGGALKERGLSALDLATFAAARDLITVVMWDMDSIDVAAKAPDGSVRHPVALSPR
Ga0209159_12691842	3300026343	Soil	AGNCTQVDRLVGTWHTHPYRAGPDGRALKERGLSALDLETFAAARDLITVVMWDMDSIDVAAKAPDGSVRHPVPLSLR
Ga0209808_11365601	3300026523	Soil	DSAGRALKERGLSAKDLETFAASRDLVAVVMWDRDSLDVATKAEDGSVRHPAPLAVH
Ga0209378_11420772	3300026528	Soil	HTHPYRADPAGRALKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDVATKAGDGSVRHPVPLAVR
Ga0209160_12387082	3300026532	Soil	CDGVAGLVGTFHTHPYRADSAGRALKERGLSTMDLETFAASPDLVALVMWDSDSLDVATKAEDGGVRHPAPVEVR
Ga0209161_101526032	3300026548	Soil	CTQVDRLVGTWHTHPYRAGPDGRALKERGLSALDLETFAAARDLVTVVVWDVDSLDVAAKRPDGSVRHPAPLTLR
Ga0209474_101174242	3300026550	Soil	AGKCDGVARLVGSFHTHPYRADSAGRAIKERGLSAMDLETFAASSDLVTVVMWDRDSLDVATKAEDGSVRHPAPLAVR
Ga0209388_12045841	3300027655	Vadose Zone Soil	FHTHPYRADPAGRAVKERGLSAMDLKTFAAAPDMVTMVMWDLDSLEAATKAVDGSVRHPAAVQIR
Ga0209180_103381872	3300027846	Vadose Zone Soil	RADATGRAVKERGLSAMDLKTFATASDMVTMVMWDLDSLDVATKAGDGSVRHPVPLAVR
Ga0209283_105299451	3300027875	Vadose Zone Soil	NCDGVAQRVGTFHTHPYRADPAGRPLKERGLSTLDLETFAHAPDLVALVMWDRDSLDGATKAWDGGVRHPAPLTVR
Ga0209590_105172642	3300027882	Vadose Zone Soil	FHTHPYRADPAGRALKERGLSPIDLKTFAAASDLVTMVMWDLDSVDVATRAVDGSVRHPAAVLVR
Ga0137415_101539493	3300028536	Vadose Zone Soil	YRADPAGRALKERGLSAMDLKTFAAAPDMVTMVMWDLDSLDVATKAGDGSVRHPVPLAVR
Ga0137415_114532362	3300028536	Vadose Zone Soil	AGYCDGVERLVGTFHTHPYRADPAGRALKERGLSPIDLKTFAAASDLVTMVMWDLDSVDVATRAVDGSVRHPAAVLVR
Ga0307469_121315182	3300031720	Hardwood Forest Soil	GVERLVGTFHTHPYRADATGRAIKERGLSAMDLKTFAAASDMVTMVMWDLDSLDVATKAGDGSVRHPVPLAVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054738

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences