Metagenome / Metatranscriptome Family F054839

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054839
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	67 residues
Representative Sequence	MTNGAEAGSSGASAHRASSEIPLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWDQ
Number of Associated Samples	86
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	66.19 %
% of genes near scaffold ends (potentially truncated)	41.73 %
% of genes from short scaffolds (< 2000 bps)	85.61 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.957 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (29.496 % of family members)
Environment Ontology (ENVO)	Unclassified (42.446 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.187 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 12.31% Coil/Unstructured: 87.69%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF00857	Isochorismatase	6.47
PF01381	HTH_3	2.16
PF13560	HTH_31	2.16
PF01042	Ribonuc_L-PSP	1.44
PF00144	Beta-lactamase	1.44
PF01895	PhoU	1.44
PF13649	Methyltransf_25	1.44
PF00132	Hexapep	1.44
PF14685	Tricorn_PDZ	0.72
PF06736	TMEM175	0.72
PF07859	Abhydrolase_3	0.72
PF00903	Glyoxalase	0.72
PF13602	ADH_zinc_N_2	0.72
PF04191	PEMT	0.72
PF00872	Transposase_mut	0.72
PF00589	Phage_integrase	0.72
PF12697	Abhydrolase_6	0.72
PF01327	Pep_deformylase	0.72
PF04545	Sigma70_r4	0.72
PF02558	ApbA	0.72
PF01197	Ribosomal_L31	0.72
PF00561	Abhydrolase_1	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	6.47
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	6.47
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	1.44
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.44
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.44
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.44
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	0.72
COG0254	Ribosomal protein L31	Translation, ribosomal structure and biogenesis [J]	0.72
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.72
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.72
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.96 %
All Organisms	root	All Organisms	46.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.96 %
cellular organisms	root	All Organisms → cellular organisms	46.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.96 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	33.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.47 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33.09 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.47 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	23.02 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.47 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.72 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.96 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	6.47 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	5.04 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.88 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.96 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	6.47 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	5.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.88 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	2.16 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.72 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.96 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	6.47 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.88 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.44 %
Acidiferrimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium	0.72 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.72 %
Acrocarpospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.96 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	6.47 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.88 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.72 %
unclassified Acidiferrimicrobium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium	0.72 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.72 %
Acrocarpospora corrugata	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora → Acrocarpospora corrugata	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.96 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	6.47 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.88 %
Acidiferrimicrobium sp. IK	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium → Acidiferrimicrobium sp. IK	0.72 %
Streptomyces sp. ST13-2-2	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ST13-2-2	0.72 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.72 %
Acrocarpospora corrugata	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora → Acrocarpospora corrugata	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_13004706	Not Available	952	Open in IMG/M
3300000956\|JGI10216J12902_113208224	Not Available	575	Open in IMG/M
3300005162\|Ga0066814_10067421	Not Available	621	Open in IMG/M
3300005330\|Ga0070690_101507560	Not Available	543	Open in IMG/M
3300005332\|Ga0066388_100336530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2155	Open in IMG/M
3300005332\|Ga0066388_102303414	Not Available	975	Open in IMG/M
3300005332\|Ga0066388_102529454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	934	Open in IMG/M
3300005332\|Ga0066388_105621768	Not Available	635	Open in IMG/M
3300005332\|Ga0066388_106668684	Not Available	582	Open in IMG/M
3300005335\|Ga0070666_11366154	Not Available	529	Open in IMG/M
3300005336\|Ga0070680_100891558	Not Available	767	Open in IMG/M
3300005337\|Ga0070682_100088013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2026	Open in IMG/M
3300005341\|Ga0070691_10812991	Not Available	570	Open in IMG/M
3300005434\|Ga0070709_10024009	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3586	Open in IMG/M
3300005526\|Ga0073909_10542133	Not Available	568	Open in IMG/M
3300005553\|Ga0066695_10565653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	688	Open in IMG/M
3300005577\|Ga0068857_102102683	Not Available	554	Open in IMG/M
3300005713\|Ga0066905_100834868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	802	Open in IMG/M
3300005713\|Ga0066905_101913104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	549	Open in IMG/M
3300005764\|Ga0066903_100260963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2688	Open in IMG/M
3300005764\|Ga0066903_101426195	Not Available	1303	Open in IMG/M
3300005764\|Ga0066903_102289138	Not Available	1043	Open in IMG/M
3300005764\|Ga0066903_102674328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	968	Open in IMG/M
3300005764\|Ga0066903_103815517	Not Available	810	Open in IMG/M
3300005764\|Ga0066903_104411593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	751	Open in IMG/M
3300005764\|Ga0066903_104742487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	723	Open in IMG/M
3300005764\|Ga0066903_105535744	Not Available	665	Open in IMG/M
3300006046\|Ga0066652_101246455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	703	Open in IMG/M
3300006574\|Ga0074056_11588216	Not Available	1594	Open in IMG/M
3300006576\|Ga0074047_11958197	Not Available	739	Open in IMG/M
3300006605\|Ga0074057_12318953	Not Available	1359	Open in IMG/M
3300006804\|Ga0079221_10054421	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1807	Open in IMG/M
3300006806\|Ga0079220_10715725	Not Available	739	Open in IMG/M
3300006854\|Ga0075425_102250068	Not Available	607	Open in IMG/M
3300006914\|Ga0075436_100788108	Not Available	707	Open in IMG/M
3300006914\|Ga0075436_101476884	Not Available	516	Open in IMG/M
3300009137\|Ga0066709_103256877	Not Available	591	Open in IMG/M
3300009792\|Ga0126374_10019155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2956	Open in IMG/M
3300009792\|Ga0126374_11295804	Not Available	588	Open in IMG/M
3300010043\|Ga0126380_10011542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3987	Open in IMG/M
3300010043\|Ga0126380_10022539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3053	Open in IMG/M
3300010043\|Ga0126380_10139194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1534	Open in IMG/M
3300010043\|Ga0126380_11178658	Not Available	659	Open in IMG/M
3300010043\|Ga0126380_11368199	Not Available	620	Open in IMG/M
3300010048\|Ga0126373_10233927	All Organisms → cellular organisms → Bacteria	1799	Open in IMG/M
3300010048\|Ga0126373_10568910	Not Available	1183	Open in IMG/M
3300010048\|Ga0126373_10972344	Not Available	914	Open in IMG/M
3300010358\|Ga0126370_10774820	Not Available	852	Open in IMG/M
3300010358\|Ga0126370_11372568	Not Available	666	Open in IMG/M
3300010359\|Ga0126376_10149781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1867	Open in IMG/M
3300010359\|Ga0126376_10309014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1379	Open in IMG/M
3300010359\|Ga0126376_10619534	Not Available	1027	Open in IMG/M
3300010360\|Ga0126372_10070044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2490	Open in IMG/M
3300010361\|Ga0126378_10660860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1158	Open in IMG/M
3300010361\|Ga0126378_11620204	Not Available	735	Open in IMG/M
3300010362\|Ga0126377_10018844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5634	Open in IMG/M
3300010366\|Ga0126379_10033244	All Organisms → cellular organisms → Bacteria	4059	Open in IMG/M
3300010366\|Ga0126379_10130322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2304	Open in IMG/M
3300010366\|Ga0126379_10561559	Not Available	1222	Open in IMG/M
3300010366\|Ga0126379_11527051	Not Available	773	Open in IMG/M
3300010366\|Ga0126379_11870384	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300010366\|Ga0126379_12450289	Not Available	621	Open in IMG/M
3300010375\|Ga0105239_11148979	Not Available	894	Open in IMG/M
3300010376\|Ga0126381_100534025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1660	Open in IMG/M
3300010376\|Ga0126381_100698020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1451	Open in IMG/M
3300010376\|Ga0126381_102857341	Not Available	688	Open in IMG/M
3300010398\|Ga0126383_10325963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1546	Open in IMG/M
3300010398\|Ga0126383_11128594	Not Available	873	Open in IMG/M
3300010868\|Ga0124844_1161911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	840	Open in IMG/M
3300012200\|Ga0137382_10386079	Not Available	985	Open in IMG/M
3300012201\|Ga0137365_10717766	Not Available	730	Open in IMG/M
3300012201\|Ga0137365_10836614	Not Available	672	Open in IMG/M
3300012948\|Ga0126375_10154502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1451	Open in IMG/M
3300012971\|Ga0126369_10264389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1701	Open in IMG/M
3300012971\|Ga0126369_10432775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1361	Open in IMG/M
3300012971\|Ga0126369_10665664	Not Available	1116	Open in IMG/M
3300012971\|Ga0126369_12011909	Not Available	666	Open in IMG/M
3300012971\|Ga0126369_12131401	Not Available	648	Open in IMG/M
3300012971\|Ga0126369_12262579	Not Available	630	Open in IMG/M
3300012984\|Ga0164309_11557459	Not Available	566	Open in IMG/M
3300012989\|Ga0164305_11376923	Not Available	620	Open in IMG/M
3300013297\|Ga0157378_10635682	Not Available	1081	Open in IMG/M
3300014326\|Ga0157380_12682419	Not Available	565	Open in IMG/M
3300016294\|Ga0182041_11333096	Not Available	657	Open in IMG/M
3300016319\|Ga0182033_12163741	Not Available	508	Open in IMG/M
3300016387\|Ga0182040_11023803	Not Available	689	Open in IMG/M
3300017947\|Ga0187785_10042566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1680	Open in IMG/M
3300017947\|Ga0187785_10092574	Not Available	1198	Open in IMG/M
3300017959\|Ga0187779_10225621	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300017959\|Ga0187779_10910536	Not Available	606	Open in IMG/M
3300017966\|Ga0187776_10018928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3752	Open in IMG/M
3300017966\|Ga0187776_10067919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2061	Open in IMG/M
3300017966\|Ga0187776_10452157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	870	Open in IMG/M
3300017974\|Ga0187777_11304320	Not Available	533	Open in IMG/M
3300017999\|Ga0187767_10285943	Not Available	557	Open in IMG/M
3300018032\|Ga0187788_10414842	Not Available	568	Open in IMG/M
3300018058\|Ga0187766_10353618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ST13-2-2	963	Open in IMG/M
3300018060\|Ga0187765_10083718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1708	Open in IMG/M
3300018060\|Ga0187765_10921858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → Acidiferrimicrobium → unclassified Acidiferrimicrobium → Acidiferrimicrobium sp. IK	593	Open in IMG/M
3300018064\|Ga0187773_10059305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1787	Open in IMG/M
3300018089\|Ga0187774_10365887	Not Available	865	Open in IMG/M
3300018089\|Ga0187774_11469598	Not Available	503	Open in IMG/M
3300018482\|Ga0066669_11010364	Not Available	750	Open in IMG/M
3300021560\|Ga0126371_10059789	All Organisms → cellular organisms → Bacteria	3672	Open in IMG/M
3300021560\|Ga0126371_10374944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1561	Open in IMG/M
3300021560\|Ga0126371_10389100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1535	Open in IMG/M
3300021560\|Ga0126371_11698023	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300025885\|Ga0207653_10109359	Not Available	985	Open in IMG/M
3300025928\|Ga0207700_11995731	Not Available	507	Open in IMG/M
3300026078\|Ga0207702_10150535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2116	Open in IMG/M
3300031543\|Ga0318516_10344737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	860	Open in IMG/M
3300031543\|Ga0318516_10479697	Not Available	714	Open in IMG/M
3300031680\|Ga0318574_10252183	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Acrocarpospora → Acrocarpospora corrugata	1021	Open in IMG/M
3300031713\|Ga0318496_10576410	Not Available	622	Open in IMG/M
3300031748\|Ga0318492_10074782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1628	Open in IMG/M
3300031799\|Ga0318565_10555236	Not Available	553	Open in IMG/M
3300031820\|Ga0307473_10463248	Not Available	847	Open in IMG/M
3300031833\|Ga0310917_10306939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1074	Open in IMG/M
3300031897\|Ga0318520_11024956	Not Available	522	Open in IMG/M
3300031947\|Ga0310909_11058144	Not Available	661	Open in IMG/M
3300032008\|Ga0318562_10484431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	717	Open in IMG/M
3300032054\|Ga0318570_10563138	Not Available	520	Open in IMG/M
3300032059\|Ga0318533_10827987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	679	Open in IMG/M
3300032060\|Ga0318505_10514568	Not Available	564	Open in IMG/M
3300032066\|Ga0318514_10514540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	637	Open in IMG/M
3300032067\|Ga0318524_10664998	Not Available	549	Open in IMG/M
3300032094\|Ga0318540_10248108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	859	Open in IMG/M
3300032205\|Ga0307472_102406332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300032261\|Ga0306920_100372774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2123	Open in IMG/M
3300032770\|Ga0335085_10033334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7150	Open in IMG/M
3300032770\|Ga0335085_10041717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6286	Open in IMG/M
3300032770\|Ga0335085_10055101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5347	Open in IMG/M
3300032783\|Ga0335079_10009409	All Organisms → cellular organisms → Bacteria	11134	Open in IMG/M
3300032783\|Ga0335079_11590734	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300032828\|Ga0335080_11011476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	846	Open in IMG/M
3300032892\|Ga0335081_11268985	Not Available	834	Open in IMG/M
3300033158\|Ga0335077_10629078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1116	Open in IMG/M
3300033158\|Ga0335077_11543258	Not Available	634	Open in IMG/M
3300033158\|Ga0335077_11721706	Not Available	592	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.53%
Host-Associated	Host-Associated	6.47%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.53%
Plants	Host-Associated → Plants	6.47%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.53%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.44%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	18.70%
Loam	Environmental → Terrestrial → Soil → Loam	16.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.44%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	18.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.51%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.04%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.32%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	29.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.51%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	11.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.51%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.16%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.44%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.44%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.44%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_130047063	3300000789	Soil	VPANVVGKWGAGLTREADMMNGAEAGSSGASAHRASSEIALPFCGDEYPPLKGSPGAVICTKACHPETQMHLNEETGW
JGI10216J12902_1132082242	3300000956	Soil	MMNGAEAGSSGAAAHRASSEISLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWD
Ga0066814_100674211	3300005162	Soil	MTNGAEAGSSGVSARGASSEMPLPFCGDEYPPLKGSPGAVICTKACHPETQVHMNEETGWVWWGQ*
Ga0070690_1015075601	3300005330	Switchgrass Rhizosphere	MTNGAEAGSSGAPARKASSEMPLPFCGDEYPPLKGSPGAVICTKACHPQTQLHMNEETGWVW
Ga0066388_1003365301	3300005332	Tropical Forest Soil	MMNGAEAGSSGASVHRAGSEIPRPFCGDEYPPLKGSPGAVICTKACHPETQLHMNDETGWVWWDQ*
Ga0066388_1023034141	3300005332	Tropical Forest Soil	VPANVVGKWGAGLTREADMMNGAEAGSSGASAHRASSEIALPFCGDEYPPLKGSPGAVICTKACHPETQMHLNEETGWVWWDQ*
Ga0066388_1025294541	3300005332	Tropical Forest Soil	VGAGLAREADMTNGAGAGSSGASAHRASSEITLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWDQ*
Ga0066388_1056217682	3300005332	Tropical Forest Soil	GAGLTREADMMNGAEAGSSGASAQRAGSEITLPFCGDEYPPLKGSPGAVICTKACHPETQTHMNEETGWVWWDQ*
Ga0066388_1066686842	3300005332	Tropical Forest Soil	TREADMMNGAEAGSSGASAHRASSEMPLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWE*
Ga0070666_113661542	3300005335	Switchgrass Rhizosphere	MTNGAEAGSSGAPARKASSEMPLPFCGDEYPPLKGSPGAVICTKACHPQTQLDMNEETGWVWWDQ*
Ga0070680_1008915582	3300005336	Corn Rhizosphere	EAVMTNGAEAGSSGAPARKASSEMPLPFCGDEYPTLKGSPGAVICTKACHPQTQLHMNEETGWVWWDQ*
Ga0070682_1000880132	3300005337	Corn Rhizosphere	MTNGAEAGSSGAPARKASSEMPLPFCGDEYPPLKGSPGAVICTKACHPQTQLHMNEETGWVWWDQ*
Ga0070691_108129912	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MTNGAEAGSSGAPARKASSEMPLPFCGDEYPTLKGSPGAVICTKACHPQTQLHMNEETGWVWWDQ*
Ga0070709_100240093	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTNGAEAGSSGASAHRASSEIPLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWDQ*
Ga0073909_105421333	3300005526	Surface Soil	VMTNGAEAGSSGAPARKASSEMPLPFCGDEYPTLKGSPGAVICTKACHPQTQLHMNEETGWVWWDQ*
Ga0066695_105656532	3300005553	Soil	MNGAGAGSSGASAHRASSEIILPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWDQ*
Ga0068857_1021026832	3300005577	Corn Rhizosphere	MTNGAEAGSSGAPARKASSEMPLPFCGDEYPPLKGSPGAVICTKACHPQTQMHMNEETGWVWWDQ*
Ga0066905_1008348681	3300005713	Tropical Forest Soil	GAGLTREADMTNGAEAGSSGASAHGVSSEIALPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEESGWVWWDE*
Ga0066905_1019131041	3300005713	Tropical Forest Soil	GAGSSGASAHRASSEITLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWDQ
Ga0066903_1002609632	3300005764	Tropical Forest Soil	MMNGAEAGSSGASVHRAGSEIPRPFCGDEYPPLKDSPGAVICTKACHPETQLHMNDETGWVWWDQ*
Ga0066903_1014261952	3300005764	Tropical Forest Soil	VGAGLTREADMNGAEAGSSGASAHRASSEITLPFCGDEYPPLKGSPGAVICTKACHPQTQMHMNEETGWVWWDQ*
Ga0066903_1022891382	3300005764	Tropical Forest Soil	MMNGAEAGSSGASAHRASSEMPLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWE*
Ga0066903_1026743283	3300005764	Tropical Forest Soil	AGLTREADMMNGAEAGSSGASAHGASSEIALPFCGDEYPPLKGSPGAVICTKACHPETQMHINEETGWVWWDQ*
Ga0066903_1038155173	3300005764	Tropical Forest Soil	MTNGAEAGSSGAPARKASSGMPLPFCGDEYPPLKGSPGAVICTKACHPQTQMHMNEETGWVWWDQ*
Ga0066903_1044115932	3300005764	Tropical Forest Soil	MTNGAEAGSSGASARGASSEMPLPFCGDEYPPLKGSPGAVICTKACHPETQLHMNEETGWVWWGQ*
Ga0066903_1047424871	3300005764	Tropical Forest Soil	NGAEAGSSGASAQRASSEITLPFCGDEYPPLKGSPGAVICTKACHHETQMHMNEETGWVWWDQ*
Ga0066903_1055357441	3300005764	Tropical Forest Soil	VGAGLAREADMTNGAEAGSSGAYANRASSEITLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEET
Ga0066652_1012464552	3300006046	Soil	MNGAGAGSSGASAHRASSEILLPFCGDEYPPLKGSPGAVICTKAYHPETQMHMNEETGWVWLGSVTPPITGTAHPG*
Ga0074056_115882163	3300006574	Soil	MTNGAEAGNSGASAYRAGPEISRPFCGDEYPPLKGSPGAVICTKACHPEAQMHMNEETGWVWWDQ*
Ga0074047_119581971	3300006576	Soil	GAGLTREADMMNGAEAGSSGASAHRASSEIALPFCGDEYPPLKGSPGAVICTKACHPEAQMHMNEETGWVWWDQ*
Ga0074057_123189531	3300006605	Soil	GKWGADLTREADMMNGAEAGSSGASAHRASSEIALPFCGDEYPPLKGSPGAVICTKACHPEAQMHMNEETGWVWWDQ*
Ga0079221_100544212	3300006804	Agricultural Soil	YAGLTREADMTNGAEAGSSGASAYRAGPEIPRPFCGDEYPPLKGSPGAMICTKACHPETQMHMNEETGWVWWDQ*
Ga0079220_107157252	3300006806	Agricultural Soil	MTNGAEAGSSGASAYRAGPEIPRPFCGDEYPPLKGSPGAMICTKACHPETQMHMNEETGWVWWDQ*
Ga0075425_1022500682	3300006854	Populus Rhizosphere	MTNGAEAGSSGAPARKASSEMALPFCGDEYPPLKGSPGAVICTKACHPQTQMHMNEETGWVWWDQ*
Ga0075436_1007881081	3300006914	Populus Rhizosphere	MTNGAEAGSSGAPARKASSEMPLPFCGDEYPTLKGSPGAVICTKACHPQTQMHMNEET
Ga0075436_1014768842	3300006914	Populus Rhizosphere	MTNGAEAGSSGASAHRASSEIPLPFCGDEYPPLKGSPGAVICTKACHPEIQMHMNEETG
Ga0066709_1032568771	3300009137	Grasslands Soil	MTNGAEAGSSGASAHRASSEIPRPFCGDEYPPLKGSPGAMICTKACHPETQMHMNEETGWVWWDSDTPH*
Ga0126374_100191551	3300009792	Tropical Forest Soil	MMNGAEAGSSGASAHRASSALPLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWDQ*
Ga0126374_112958041	3300009792	Tropical Forest Soil	MMNGAEAGSSGASAQRAGSEITLPFCGDEYPPLKGSPGAVICTKACHPETQTH
Ga0126380_100115424	3300010043	Tropical Forest Soil	MTNGAGAGSSGASAHRASSEITLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWDQ*
Ga0126380_100225391	3300010043	Tropical Forest Soil	MMNGAEAGSSGASVHRAGSEIPRPFCGDEYPPLKGSPGAVICTKACHPETQMHMNDETGW
Ga0126380_101391942	3300010043	Tropical Forest Soil	MWWASGAGLTREADMTNGAEAGSSGASAHGVSSEIALPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEESGWVWWDE*
Ga0126380_111786582	3300010043	Tropical Forest Soil	VVGKWGAGLIREADMMNGAEAGSSGASAHRASSEIALPFCGDEYPPLKGSPGAVICTKACHTETQMHMNEETGWVWWDQ*
Ga0126380_113681991	3300010043	Tropical Forest Soil	VGAGLTREADMMNGAEAGSSGASARRASSEIALPFCGDESPPLKGSPGAVICTKACHPETQMHMNEETGWVWWDQ*
Ga0126373_102339272	3300010048	Tropical Forest Soil	MTNRAEAGSSGESARKASAEIALPFCGDEYPPLKGSPGAMICTKACHPETQMHMNEETGWVWWD*
Ga0126373_105689102	3300010048	Tropical Forest Soil	MMNGAEAGSSGASSQRASSEITLPFCGDEYPPLKGSPGAVICTKACHRETQLHMNEETGWVWWDQ*
Ga0126373_109723442	3300010048	Tropical Forest Soil	MAARAAPVVLANVVYEWVRALTREADMTNGAEAGSSGASAHSAGSEILLPFCGDEYPPLKGSPGAVICTKACHPETQTHMNEETGWVWWDQ*
Ga0126370_107748201	3300010358	Tropical Forest Soil	LTRKADMMNGAEAGSSGASAHRASSEMPLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWE*
Ga0126370_113725681	3300010358	Tropical Forest Soil	VGAGLTREADMMNGAEAGSSGASAQRAGSEITLPFCGDEYPPLKGSPGAVICTKACHP
Ga0126376_101497813	3300010359	Tropical Forest Soil	MTNGAEAGSSGASAHGVSSEIALPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEESGWVWWDE*
Ga0126376_103090142	3300010359	Tropical Forest Soil	MTNGAGAGSSGASAHRASSEITLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEE
Ga0126376_106195342	3300010359	Tropical Forest Soil	MTNEAEAGSLGASAHRAGSEIPRTFCGDEYPPLKGSPGALICTKACHPDTQMHMNEETGWVWWDQ*
Ga0126372_100700444	3300010360	Tropical Forest Soil	MMNGAEAGSSGASAQRAGSEITLPFCGDEYPPLKGSPGAVICTKACHPETQTHMNEETGWVWWDQ*
Ga0126378_106608602	3300010361	Tropical Forest Soil	MWWQAGAGLTREADMTNGAEAGSSGASAQRASSEITLPFCGDEYPPLKGSPGAVICTKACHRETQMHMNEETGWVWWDQ*
Ga0126378_116202041	3300010361	Tropical Forest Soil	MMNGAAAGSSDASARRASFEIPLPFCGDEYPPLKGSPGAMICTKAYHPEIQMHMNEETGWVWWDQ*
Ga0126377_100188443	3300010362	Tropical Forest Soil	MMNGAEAGSSGASVRRAGSEIPRPFCGDEYPPLKDSPGAVICTKACHPETQMHMNDETGWVWWDQ*
Ga0126379_100332442	3300010366	Tropical Forest Soil	MMNGADAGSSGASAHRASSEMPLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWE*
Ga0126379_101303222	3300010366	Tropical Forest Soil	MMNGAEAGSSGASAHRASSEITLPFCGDEYPPLKGSPGAVICTKACHRETQLHMNEETGWVWWDQ*
Ga0126379_105615592	3300010366	Tropical Forest Soil	MTNGAEAGSSGASAHRASSEITLPFCGDEYPPLKGSLGAVICTKACHPETQLHMNEETGWVWWDQ*
Ga0126379_115270511	3300010366	Tropical Forest Soil	MNGAEAGSSGASARRASSEIALPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWDQ*
Ga0126379_118703842	3300010366	Tropical Forest Soil	MMNGAAAGSSDASARRASFEMPLPFCGDEYPPLKGSPGAMICTKAYHPETQMHMNEETGWVWWDQ*
Ga0126379_124502891	3300010366	Tropical Forest Soil	MTNGAEAGSSGAPAHRASSEIPLPFCGDEYPPLKGSPGAVICTKSCHPETQMHVNEETGWVWWDQ*
Ga0105239_111489792	3300010375	Corn Rhizosphere	SGAPARKASSEMALPFCGDEYPPLKGSPGAVICTKACHPQTQLHMNEETGWVWWDQ*
Ga0126381_1005340253	3300010376	Tropical Forest Soil	MMNGAESGSLGSSAHRASSEMSLPFCGDEYPPLKGSPGAVICTKACHRETQLHMNEETGWVWWDQ*
Ga0126381_1006980203	3300010376	Tropical Forest Soil	SSGASAQRASSEITLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWDQ*
Ga0126381_1028573412	3300010376	Tropical Forest Soil	EAVMTNGAEAGSWGASARRASSEMPLPFCGDEYPPLKGSPGAMVCTKAYHPETQMHMNEETGWVWWDQ*
Ga0126383_103259631	3300010398	Tropical Forest Soil	MMNGAGAESSGASAHRASSEITLPFCGDEYPPLKGSPGAVICTKACHRETQLHMNEETGWVWW
Ga0126383_111285942	3300010398	Tropical Forest Soil	MTNGAEAGSSGAPARKASSGITLPFCGDEYPPLKGSPGAVICTKACHPQTQMHMNEETGWVWWDQ*
Ga0124844_11619112	3300010868	Tropical Forest Soil	MTNGAEAGSSGASAQRASSEITLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWDQ*
Ga0137382_103860792	3300012200	Vadose Zone Soil	MTNGAEAGSSGASARGASSEMPLPFCGDEYPPLKGSPGAVICTKACHPETHMHMNEETGWVWWDQ*
Ga0137365_107177661	3300012201	Vadose Zone Soil	MTNGADAGSSGASAHRAGSEIPRPFCGDEYPPLKGSPGAVICTKACHPETLMHMNEETGWVWWDQ*
Ga0137365_108366141	3300012201	Vadose Zone Soil	MTNGAEAGRSGASAHGASSEIPLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWDQ
Ga0126375_101545022	3300012948	Tropical Forest Soil	MMNGAEAGSSGASVRRAGSEIPRPFCGDEYPPLKGSPGAVICTKACHPETQMHMNDETGWVWWDQ*
Ga0126369_102643891	3300012971	Tropical Forest Soil	GSSGASAQRASSEITLPFCGDEYPPLKGSPGAVICTKACHRETQMHMNEETGWVWWDQ*
Ga0126369_104327752	3300012971	Tropical Forest Soil	MTNGAEAGSSGAPARGASSEMPLPFCGDEYPPLKGSPGAVICTKACHPETQLHMNEETGWVWWGQ*
Ga0126369_106656642	3300012971	Tropical Forest Soil	MMNGAEAGSSGASARRASSEIPLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWE*
Ga0126369_120119092	3300012971	Tropical Forest Soil	ASARRASFEMPLPFCGDEYPPLKGSPGAVICTKACHPQTQMHMNEETGWVWWDQ*
Ga0126369_121314011	3300012971	Tropical Forest Soil	CCGKRDAGLAREADMTNRAEAGSSGESARKASAEIALPFCGDEYPPLKGSPGAMICTKACHPESQMHMNEETGWVWWD*
Ga0126369_122625791	3300012971	Tropical Forest Soil	LTREADMMNGAEAGSSGASAHRASSEMPLPFCGDEYPPLKGSPGAVICTKACHPETQM
Ga0164309_115574591	3300012984	Soil	MTNGAEEGSSGASAHRASSEIALPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEESGWVWWD
Ga0164305_113769231	3300012989	Soil	TNGAEEGSSGASAHRASSEIALPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEESGWVWWDQ*
Ga0157378_106356821	3300013297	Miscanthus Rhizosphere	MTKEAEAGSSGAPARKASSEMPLPFCGDEYPPLKGSPGAVICTKACHPQTQLHMNEETGWVWWDQ*
Ga0157380_126824191	3300014326	Switchgrass Rhizosphere	IWCATGAGPTKEAVMTNGAEAGSSGAPARKASSEMALPFCGDDYPPLKGSPGAVICTKACHPQTQLHMNEETGWVWWDQ*
Ga0182041_113330962	3300016294	Soil	MDRIHHIRHRMRGQLGTGPTREADMTNGAEAGSSGASAHRASPEMPLPFCGDEYPPLKGSPGAVICTKSCHPETQMHLNEETGWVWWYQ
Ga0182033_121637411	3300016319	Soil	EADMMNRPEAESSGASARRASFEVSLPFCGSEYPPLKGSPGAVICTKACHPKTQLHMNEETGWLWWDQ
Ga0182040_110238031	3300016387	Soil	VDAGLAREADMMNGAEAGSSGASAHRASPEMPLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWYQ
Ga0187785_100425662	3300017947	Tropical Peatland	MTNGAEAGSSGAPARGASSEMPLPFCGDEYPPLKGSPGAVICTKACHPETQLHMNEETGWVWWGQ
Ga0187785_100925741	3300017947	Tropical Peatland	MTNGAEAGSSGASAHRASSEITLPFCGDEYPPLKGSPGAMICTKACHPETQMHMNEETGWVWWDQ
Ga0187779_102256212	3300017959	Tropical Peatland	GGGGLTREGDTMNGAEAGSSGASAHRASSEIALPFCGDEYPPLKGSPGAVICTKACHPEAQMHMNEETGWVWWDQ
Ga0187779_109105361	3300017959	Tropical Peatland	VGASLTKGTDMMNGAEAGSSGASAHRASSEMPLPFCGDEYPPLKGSPGAVICTKVCHPETHLHMNEETGWAWWDQ
Ga0187776_100189283	3300017966	Tropical Peatland	MMNGAEAGSSGASAHRASSEIALPFCGDEYPPLKGSPGAVICTKACHPETQMHLNEETGWVWWDQ
Ga0187776_100679191	3300017966	Tropical Peatland	MMNGAEAGSSGAPAYRASPQIPLPFCGDEYPPLKGSPGAVICTKSCHPETQMHMNEETGWVWW
Ga0187776_104521571	3300017966	Tropical Peatland	VGAGLTREADMTNGAEAGSSGASAHRASSEIILPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWDQ
Ga0187777_113043201	3300017974	Tropical Peatland	MTNGAEAGSSGASAHRANSEITLPFCGDEYPPLKGSPGAVICTKACHPETQLHMNEETGWVWWDQ
Ga0187767_102859432	3300017999	Tropical Peatland	MMNGAEAGGPGASAHRASSEIALPFCGDEYPPLKGSPGAVICTKACHPGTQLHMNEETGWVWW
Ga0187788_104148422	3300018032	Tropical Peatland	MTNGAEAGSSGAPARGASSEMPLPFCGDEYPPLKGSPGAVICTKACHPETQLHMNEETGWVWWDQ
Ga0187766_103536182	3300018058	Tropical Peatland	MNGAEAGSSGASAHRASSEIALPFCGDEYPPLKGSPGAVICTKACHPEAQMHMNEETGWVWWDQ
Ga0187765_100837182	3300018060	Tropical Peatland	VGAGLTKGADMMNGAEAGSSGASAHRASSEIPLPFCGDEYPPLKGSPGAVICTKACHPETQLHMNEETGWVWWDQ
Ga0187765_109218582	3300018060	Tropical Peatland	MTNGAEAGSSGAPAHRASFEIPLPFCGDEYPPLKGSPGAMICTKACHPEIQMHMNEETGWVWWD
Ga0187773_100593054	3300018064	Tropical Peatland	VGAGLTREADMTNGAEAGSSGASAHRASSEIILPFCGDEYPPLKGSPGAVICTKACHPETQMHLNEETGWVWWDQ
Ga0187774_103658872	3300018089	Tropical Peatland	VPANVVGKWGAGLTREADMMNGAEAGSSGASAHRASSEIALPFCGDEYPPLKGSPGAVICTKACHPETQMHLNEETGWVWWDQ
Ga0187774_114695981	3300018089	Tropical Peatland	MTNGAEAGSSGASARRASSEMPLPFCGDEYPPLKGSPGAMVCTKACHPETQMHMNEETGWVWWGE
Ga0066669_110103642	3300018482	Grasslands Soil	MTNGAEAGSSGASARRASSEIPLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWDQ
Ga0126371_100597892	3300021560	Tropical Forest Soil	MTDRAEAGSSGESARKASAEIALPFCGDEYPPLKGSPGAMICTKACHPETQMHMNEETGWVWWD
Ga0126371_103749442	3300021560	Tropical Forest Soil	MTNGAEAGSSGASAQRASSEITLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWDQ
Ga0126371_103891001	3300021560	Tropical Forest Soil	MMNGAEAGSSGASAHRASSEMPLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWE
Ga0126371_116980231	3300021560	Tropical Forest Soil	MMNGAAAGSSDASARRASFEMPLPFCGDEYPPLKGSPGAMICTKAYHPETQMHMNEETGWVWWDQ
Ga0207653_101093591	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MTNGAEAGSSGAPARKASSEMPLPFCGDEYPTLKGSPGAVSCTKACHAQTQLHMNEETGWVWWDQ
Ga0207700_119957311	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	SGVSARGASSEMPLPFCGDEYPPLKGSPGAVICTKACHPETQVHMNEETGWVWWGQ
Ga0207702_101505353	3300026078	Corn Rhizosphere	MTNGAEAGSSGAPARKASSEMPLPFCGDEYPPLKGSPGAVICTKACHPQTQLHMNE
Ga0318516_103447372	3300031543	Soil	EAGSSGASAHRASPEMPLPFCGDEYPPLKGSPGAVICTKSCHPETQMHLNEETGWVWWYQ
Ga0318516_104796971	3300031543	Soil	MMNGPEAESSGASARRASFEVSLPFCGSEYPPLKGSPGAVICTKACHPKTQLHMNEETGWLWWDQ
Ga0318574_102521833	3300031680	Soil	LAREADMTNGAEAGSSGASAHRASSEMPLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWYQ
Ga0318496_105764102	3300031713	Soil	VDAGLAREADMMNGAEAGSSGASAHRASPEMPLPFCGDEYPPLKGSPGAVICTKSCHPET
Ga0318492_100747823	3300031748	Soil	MMNGAEAGSSGASAQRASSEITLPFCGDEYPPLKGSPGAVICTKACHPETQMHLNEETGWVWWYQ
Ga0318565_105552362	3300031799	Soil	DAGLTREADMMNGPEAESSGASARRASFEVSLPFCGSEYPPLKGSPGAVICTKACHPKTQLHMNEETGWLWWDQ
Ga0307473_104632481	3300031820	Hardwood Forest Soil	NGAEAGSSGASARKASSEMPLPFCGDKYPPLKGSPGAVICTKACHPQTQLHMNEETGWVWWDQ
Ga0310917_103069392	3300031833	Soil	WQVDAGLTREADMMNGAEAGSSGASAHRASPEMPLPFCGDEYPPLKGSPGAVICTKSCHPETQMHLNEETGWVWWYQ
Ga0318520_110249561	3300031897	Soil	MNGAEAGSSGASAHRASPEMPLPFCGDEYPPLKGSPGAVICTKSCHPETQMHLNEETGWV
Ga0310909_110581441	3300031947	Soil	MMNGAEAGSSGASAHRASPEMPLPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGW
Ga0318562_104844311	3300032008	Soil	EADMMNGAEAGSSGASAHRASPEMPLPFCGDEYPPLKGSPGAVICTKSCHPETQMHLNEETGWVWWYQ
Ga0318570_105631381	3300032054	Soil	MMNGPEAESSGASARRASFEVSLPFCGSEYPPLKGSPGAVICTKACHPKTQLHMNE
Ga0318533_108279871	3300032059	Soil	AEAGSSGASAHRASPEMPLPFCGDEYPPLKGSPGAVICTKSCHPETQMHLNEETGWVWWY
Ga0318505_105145681	3300032060	Soil	MNGAEAGSSGASAHRASPEMPLPFCGDEYPPLKGSPGAVICTKSCHPETQMHLNEETGWVWW
Ga0318514_105145402	3300032066	Soil	GLAREADMMNGAEAGSSGASAHRASPEMPLPFCGDEYPPLKGSPGAVICTKSCHPETQMHLNEETGWVWWYQ
Ga0318524_106649981	3300032067	Soil	MMNGPEAESSGASARRASFEVSLPFCGSEYPPLKGSPGAVICTKACHPKTQLHMNEETG
Ga0318540_102481082	3300032094	Soil	AREADMMNGAEAGSSGASAHRASPEMPLPFCGDEYPPLKGSPGAVICTKSCHPETQMHLNEETGWVWWYQ
Ga0307472_1024063322	3300032205	Hardwood Forest Soil	GLTREADMTNEAEAGSLGASAHRAGSEIPRPFCGDEYPPLKGSPGALICTKACHPDTQMHMNEETGWVWWDQ
Ga0306920_1003727742	3300032261	Soil	MMNGAEAGSSGASAHRASPEMPLPFCGDEYPPLKGSPGAVICTKSCHPETQMHLNEETGWVWWYQ
Ga0335085_100333348	3300032770	Soil	MMNGAEAGSSGAPAYRASSQIPLPFCGDEYPPLKGSPGAVICTKSCHPETQMHMNEETGWVWWDQ
Ga0335085_100417178	3300032770	Soil	MTNGAEAGSSGASAHRASSEIALPFCGDEYPPLKGSPGAVICTKACHPETQTHMNEETGWVWWDQ
Ga0335085_100551013	3300032770	Soil	MMNGAEAGSSGASVHRAGSEIPRPFCGDEYPPLKGSPGAVICTKACHPETQMHMNDETGWVWWDQ
Ga0335079_1000940911	3300032783	Soil	MTNGAETGSSGAPAYRANSEIPLPFCGDEYPPLKGSPGAVICTKACHPKTQMHMNEETGWVWWDQ
Ga0335079_115907342	3300032783	Soil	MWWASGRGPDQEGADMTNGAEAGSSGASAHRASSEIALPFCGDEYPPLKGSPGAVICTKACHPETQTHMNEETGWVWWDQ
Ga0335080_110114762	3300032828	Soil	VGAGLTKEADMMNGAEAGSSGAPAYRASSQIPLPFCGDEYPPLKGSPGAVICTKSCHPETQMHMNEETGWVWWDQ
Ga0335081_112689851	3300032892	Soil	MANGAEAGSSGAPGPRAGSEMPLPFCGDEYPPLKGSPGAVICTKACHPQTQVHMNEETGWVWWDQ
Ga0335077_106290781	3300033158	Soil	MTNGAEAGSSGAPARKASSEMALPFCGDEYPPLKGSPGAVICTKACHPQTQMHMNEETGWVWWDQ
Ga0335077_115432581	3300033158	Soil	MTNGAEAGGPGASAHRASSEIALPFCGDEYPPLKGSPGAVICTKACHPETQLHMNE
Ga0335077_117217062	3300033158	Soil	MMNGAEAGSSGASVHRAGSEIPRPFCGDEYPPLKGSPGAVICTKACHPETQMHMNEETGWVWWDQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054839

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences