Metagenome / Metatranscriptome Family F055018

Basic Information
Family ID	F055018
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	50 residues
Representative Sequence	MSIINKPPEMVKREYELQEPIALAVEKYATFIQSTPDHVVNSALKMVIW
Number of Associated Samples	116
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	11.51 %
% of genes from short scaffolds (< 2000 bps)	12.95 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (86.331 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.935 % of family members)
Environment Ontology (ENVO)	Unclassified (35.252 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.043 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 77.55% β-sheet: 0.00% Coil/Unstructured: 22.45%
Feature Viewer

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Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF02371	Transposase_20	2.16
PF00589	Phage_integrase	2.16
PF04610	TrbL	1.44
PF12796	Ank_2	0.72
PF16640	Big_3_5	0.72
PF13560	HTH_31	0.72
PF07589	PEP-CTERM	0.72
PF04335	VirB8	0.72
PF00753	Lactamase_B	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	2.16
COG3704	Type IV secretory pathway, VirB6 component	Intracellular trafficking, secretion, and vesicular transport [U]	1.44
COG3846	Type IV secretory pathway, TrbL components	Intracellular trafficking, secretion, and vesicular transport [U]	1.44
COG3736	Type IV secretory pathway, component VirB8	Intracellular trafficking, secretion, and vesicular transport [U]	0.72

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.33 %
All Organisms	root	All Organisms	13.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.33 %
cellular organisms	root	All Organisms → cellular organisms	13.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.33 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	13.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.33 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	13.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.33 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.33 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.67 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005176\|Ga0066679_10343095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	976	Open in IMG/M
3300005559\|Ga0066700_10041546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2772	Open in IMG/M
3300006032\|Ga0066696_10498291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	799	Open in IMG/M
3300006794\|Ga0066658_10148325	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1184	Open in IMG/M
3300006854\|Ga0075425_100901695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1011	Open in IMG/M
3300010303\|Ga0134082_10177148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300012361\|Ga0137360_10729786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300012917\|Ga0137395_10631560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300012929\|Ga0137404_10659907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300016270\|Ga0182036_10505247	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	958	Open in IMG/M
3300020015\|Ga0193734_1033387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	965	Open in IMG/M
3300021404\|Ga0210389_10889224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	694	Open in IMG/M
3300021479\|Ga0210410_10708193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300026325\|Ga0209152_10197690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300026342\|Ga0209057_1123817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300027825\|Ga0209039_10229229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300029636\|Ga0222749_10401879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300032174\|Ga0307470_10393078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300032828\|Ga0335080_10806831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.28%
Host-Associated	Host-Associated	0.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.21%
Aquatic	Environmental → Aquatic	10.07%
Plants	Host-Associated → Plants	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.05%
Freshwater	Environmental → Aquatic → Freshwater	7.91%
Sediment	Environmental → Aquatic → Sediment	2.16%
Peat	Environmental → Terrestrial → Peat	2.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.66%
Loam	Environmental → Terrestrial → Soil → Loam	9.35%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.19%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.16%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.16%
Lake	Environmental → Aquatic → Freshwater → Lake	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.63%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.32%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.16%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.16%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.16%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.44%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.51%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.32%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.32%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.16%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.16%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.16%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.44%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.44%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.44%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026941	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 39 (SPAdes)	Environmental	Open in IMG/M
3300027035	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 30 (SPAdes)	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1038925342	3300000955	Soil	MSIINKPPQHVKREYELEEPGALVVEKYATFIDSTPDHVVNSALKMLLWKDKHFMNWRKQ
JGI25384J37096_102240181	3300002561	Grasslands Soil	MSIINKPPEMVKREYELQEPIAVAVEKYATFIQSTPDHVVNSALKIVIWRDVEFRRWRKQTQA
JGI25612J43240_10640591	3300002886	Grasslands Soil	MSIINKPPEMVKREYELQEPLAVAVEKYATFIQSTPDHVVNSTLKIVI
Ga0066679_103430952	3300005176	Soil	MSIINKPPERVKREYELQEPIAVAVEKYATFIQSTPDHVVNSALKMVIWRDAE
Ga0066678_101849511	3300005181	Soil	MSIINKPPAMVKREYELQDPVAQAVEKYAIFIQSTPDHIVNSALKMV
Ga0066678_102899542	3300005181	Soil	MSIIHKPPEMVKREYELQEPIAVAVEKYATFIQSTPDHVVDSALKIVIGAMWSS
Ga0066388_1086724781	3300005332	Tropical Forest Soil	MSVINRPPEMVKREYELQEPIALAVEKYATFIQSTPDHVVNSALKIVIWRDVEFRRWRKQ
Ga0070732_107694762	3300005542	Surface Soil	MSIINKPPQHVKREYELEEPVALVVEKYATFIDSTPDHVVNSALKMLLWKDKHFMNWRKQ
Ga0066661_104820862	3300005554	Soil	MSIISKHPQHVKREYELEEPIALVVEKYAVFIDSTPDHVVNSALKIVLWRDRHFM
Ga0066692_103425681	3300005555	Soil	MSIINKPPQHVKREYELEEPVALVVEKYATFIDST
Ga0066700_100415463	3300005559	Soil	MSIVNKPPQHVKREYQLEEPVALVVEKYATFIDSTPDHVVNSALKMLLWKDKHFMNWR
Ga0066705_104607711	3300005569	Soil	MSIINRPPEMVKREYELQEPIAVAVEKYATFILSTPDHVVNSALKIVIWRDAEF
Ga0066705_108499232	3300005569	Soil	MSIINKPPEMVKREYELQEPIAVAVEKYATFIQSTPDHVVNSALKIVIWRDVEFR
Ga0070762_102245741	3300005602	Soil	MSIINKPPEMVKREYELQEPIAVAVEKYAAFIASTPDHVVNSALKMVLWRD
Ga0070763_109596342	3300005610	Soil	MSIINKPPEMVKREYELQEPIAVAVEKYATFIQSTPDHVVNSA
Ga0070766_111112621	3300005921	Soil	VKREYELQEPIAIAVDKDATFIQSTPDHVVDSALKIVIGEMWSSAAG
Ga0066696_104982911	3300006032	Soil	MSIINKPPQHVKREYELEEPVALVVEKYATFIDSTP
Ga0070765_1017557331	3300006176	Soil	MSIINRPPEMVKREYELQDPVAQAVEKYAAFIQSTPDHVVNSALKMVIWKDAEFRRWRKQQQ
Ga0066658_101483252	3300006794	Soil	MSIINKPPQHVKREYELEEPVALVVEKYATFIDSTPDHVVNSALKIVLWRGTSTS*
Ga0075425_1009016952	3300006854	Populus Rhizosphere	MSIINKPPQHVKREYELEEPVALVVEKYATFIDSTSDHVVNSALKMLL*
Ga0099795_100567432	3300007788	Vadose Zone Soil	MSIINKPPEMVKREYELQEPIAAAVEKYATFIESAPDHVVNSALKMVISR
Ga0066710_1033777812	3300009012	Grasslands Soil	MSIINKPPQHVKREYELEEPVALVVEKYATFIDSTPDHVVNSALKIVLWRDRHFM
Ga0099830_115857841	3300009088	Vadose Zone Soil	VSKEEKEEKRRKHMSIINKPPQHVKREYELEEPVALVVEKYATFIDSTPNHVVNSALKMLLWKDKHFMNWRK
Ga0099792_102180122	3300009143	Vadose Zone Soil	MSIINRPPEMAKREYELQEPIAVAVDKDATFIQSRPDHVVDSALKIVI*
Ga0134082_101771481	3300010303	Grasslands Soil	MSIVNKPPQHVKREYQLEEPVALVVEKYATFIDSTPDHVVNSALKMLLWKDKHFMNWRKQQQQ
Ga0134084_102704591	3300010322	Grasslands Soil	MSIINRPPEIVKREYELQEPIAVAVEKYATFIQSTPDRVVNSALKIVIWRDVDFRRW
Ga0126376_119775441	3300010359	Tropical Forest Soil	MSIINKPPEMVKREYELQEPIALAVEKYATFIQSTPDHVVNSALKMVIWRDTEFRRWCKQ
Ga0137392_101449102	3300011269	Vadose Zone Soil	MSIINKPPEMVKREYELQEPIAVAVEKYATFIQSTPDHVVNSALKMV
Ga0137392_102553073	3300011269	Vadose Zone Soil	MSIINRPPEMVKREYELQEPIAVAVDKDATFIQSRPDHVVDSALKIVI*
Ga0137391_103768562	3300011270	Vadose Zone Soil	MSIINKPPQHVKREYQLEEPVALVVEKYATFIDSTPDHVVNSALKMLLWKDKHFMNWRKQQQQA
Ga0137391_109143651	3300011270	Vadose Zone Soil	LKANKKERREEMSIINKPPQHVKREYELEEPVALVVEKYATFIESTPDHVVNSALKMLLWRDKQFLNWRKQQQL
Ga0137389_100895974	3300012096	Vadose Zone Soil	MSIINKPPEMVKREYELQEPIAVAVEKYAAFIASTP
Ga0137389_115809861	3300012096	Vadose Zone Soil	MSIINKPPEMVKREYELQEPIAVAVEKYATFIASTPDHVVNSALKMVLWRDADFRRWRKQ
Ga0137388_101653593	3300012189	Vadose Zone Soil	MPIINRPPEMVKREYELQEPIAVAVEKYATFIQSTPDHVVNSALKIVIWRDVEFRR*
Ga0137383_101693851	3300012199	Vadose Zone Soil	MSIINKPPEMVKREYELQEPIAVAVEKYATFIQSTPDHVVNSALKIVIWRD
Ga0137382_109072621	3300012200	Vadose Zone Soil	MSIINKPPQHVKREYELEEPVALTVEKYATFIDSTPDHVVNSALKIVLWRDRHFMNWRKQ
Ga0137363_100853743	3300012202	Vadose Zone Soil	MSIINRPPEMVKREYELQEPIAVAVEKYATFIQSTPDHVVNSALKIVIWRDVEFRRWRKQQQ
Ga0137363_104178432	3300012202	Vadose Zone Soil	MSIINKPPEMVKREYELQEPIAVAVEKYAAFIASTPDHVVNSALKMVLGRDADFRRWRKQ
Ga0137363_116936151	3300012202	Vadose Zone Soil	MSIINKPPEMVKREYELQEPIAVAVEKYATFVQCTPDHVVNSALKIVIWRDVEFRRWRKQ
Ga0137399_100807684	3300012203	Vadose Zone Soil	MSIINRPPEMVKREYELQEPIAVAVEKYASFIQSTPDHVVNSALKMVIW
Ga0137399_102065843	3300012203	Vadose Zone Soil	VSKEEKEEKRRKHMSIINKPPQHVKREYELEEPVALVVEKYATFIDSTPDHVVNSALKMLLWKDKHFMNW
Ga0137399_116117051	3300012203	Vadose Zone Soil	MSIINKPPEMVKREYELQEPIAVAVEKYAAFIGSTPDHVVNSALKMVVWKDADFRRWRKQQQT
Ga0137362_101574931	3300012205	Vadose Zone Soil	MPIINKQPAIVKHEYAIEEPVALVVERYAAFIQSTPD
Ga0137377_109614881	3300012211	Vadose Zone Soil	MSIINKPPEMVRREYELQEPIAVAVEKYASFIQSTPDHVVNSALKIVIWRDVEFRRWRKQQQ
Ga0137377_115642522	3300012211	Vadose Zone Soil	MVKREYELQEPIAVAVEKYATFIQSTPDHVVNSALKIVIWRDVEFRRWRKQTQA
Ga0137384_111940851	3300012357	Vadose Zone Soil	MSIINKPPQHVKREYELEEPVALVVEKYASFIDSTPDHVVNAA
Ga0137360_103895181	3300012361	Vadose Zone Soil	MSIINKPPEMVKREYELHEPIAVAVEKYATFIQSTPDHVVNSALKIV
Ga0137360_107297862	3300012361	Vadose Zone Soil	MSIINKPPEMVKREYELQEPIALAVEKYATFIQSTPDHVVNSALKMVIWRDVEFRRWR
Ga0137395_106315602	3300012917	Vadose Zone Soil	MSIINKPPEMVKREYELQEPIAVAVEKYATFIQSTPDHAVN
Ga0137395_107462601	3300012917	Vadose Zone Soil	MKEGELMSIINKPPEMVKREYELQEPIAVAVEKYAAFIASTPDHVVNSALKMVLWRDADF
Ga0137395_110923851	3300012917	Vadose Zone Soil	MSIINRPPEMAKREYELQEPISVAIDKDAIFIQSRPDHVVDSALKIVI*
Ga0137396_100142027	3300012918	Vadose Zone Soil	MSIINRPPEMVKREYELQEPIAVAVEKYATFIQSTPDHVVNSALKI
Ga0137396_112924361	3300012918	Vadose Zone Soil	MSIVNKPPQHVKREYQLEEPVALVVEKYATFIDSTPDHVVNSALKMLLWKDKHFM
Ga0137359_102305683	3300012923	Vadose Zone Soil	MSIINKPPEMVKREYELQEPIAVAVEKYASFIQSTPDHVVNSALKIVIWR
Ga0137416_102982631	3300012927	Vadose Zone Soil	MSIINKPPQHVKREYELEEPVALVVEKYATFIDSTPDHVVNSALKMLL
Ga0137404_106599071	3300012929	Vadose Zone Soil	MSIINKPPEMVKREYELQEPIAVAVEKYAAFIASTPDHVVNSALKMVLWRDADFR
Ga0137404_113072001	3300012929	Vadose Zone Soil	MPIINKQPAIVKREYSIEEPVALVVERYAAFIQSTPDYVVNS
Ga0137407_122980321	3300012930	Vadose Zone Soil	MSIINKPPEMVKREYELQEPIAVAVEKYAAFIQSTPDHVVNSALKMVL
Ga0153915_115160881	3300012931	Freshwater Wetlands	MSIINKPPQHVKREYELEEPVALVVEKYATFIDSTPDHVVNS
Ga0153916_101365853	3300012964	Freshwater Wetlands	MSIINKPPEMLKREYELQEPIAVAVEKYAAFIASTPDHVVNSAL
Ga0182024_100118347	3300014501	Permafrost	VRPNRRRKKGELMSIINKPSETVKREYELQEPIAVTVEKYAAFIQSTSDHVVNSALKIVL
Ga0182036_105052471	3300016270	Soil	MSIINKPPQHVKREYELEEPVAVVVEKYATFIDSTPDHVVNSALKMLLWKDKHFMNWRKQQQQA
Ga0182041_109279671	3300016294	Soil	MSIINKPPEMVKREYELQEPIAVAVEKYATFIQSSPDHVVNSALKIVIWR
Ga0187802_101948861	3300017822	Freshwater Sediment	MSIINKPPEMVKREYELQEPIALAVEKYATFIQSTPDHVVNSA
Ga0187817_100235001	3300017955	Freshwater Sediment	MSIINKPPQHVKHEYELEEPVALVVEKYATFIDSTPDHVVNSALKMLLWKDKH
Ga0187817_102598232	3300017955	Freshwater Sediment	MSIINKPPQHVKREYELEEPVALVVEKYATFIDSTPDHVVNSALKMLLWKDKHFMNWR
Ga0187817_107584192	3300017955	Freshwater Sediment	MSIINKPPEMVKREYELQEPIAVAVEKYAAFIASTPDHVV
Ga0187810_100978872	3300018012	Freshwater Sediment	MSIINKPPEMVKREYELQEPVAAAVERYASFIQSTPDHVVNSAL
Ga0187769_109702841	3300018086	Tropical Peatland	MSIINKPPLHVKREYELEEPVALAVEKYATFIDSTPDHV
Ga0187770_109234881	3300018090	Tropical Peatland	MSIINKPPEMVKREYELQEPIALAVEKYATFIQSTPDHVVNSALKMVIW
Ga0066662_105183402	3300018468	Grasslands Soil	MSIINKPPQRVKREYQLEQPVALVVEKYATFIDSTPDHAVN
Ga0193747_11152802	3300019885	Soil	MPIINKQPAIVKREYAIEEPVALIVERYAAFIQSTSDYVV
Ga0193729_10423281	3300019887	Soil	MVNREYELQEPIAVAVDKYATFIQSTPDHVVDSALKIVIGEMWSSVAGS
Ga0193734_10333871	3300020015	Soil	MSIINRPPEMVKREYELQEPIAVAVEKYATFIQSTPDHVVNSALKIVIGRDVEFRRWH
Ga0179594_103986571	3300020170	Vadose Zone Soil	MSIINKPPQRVKREYQLEEPVALVVEKYATFIDSTPDHVVNSALKMLLWKD
Ga0179592_101471161	3300020199	Vadose Zone Soil	MSIINKPPQHVKREYELEEPVALVVEKYATFIDSTPDHVVNSALKIVLWRDRHFMNWRKQQQQA
Ga0210407_114796821	3300020579	Soil	MSIITKSPEMVKREYELQEPIAVAVEKYATFIQSTPDHVVNSAL
Ga0210403_103853842	3300020580	Soil	MSIINKPPEMVKREYELQEPIAVAVEKYAAFIAST
Ga0210399_116059881	3300020581	Soil	MSIINKPPEMVKREYELQEPIAVAVEKYAAFIQSTPDHVV
Ga0179596_101475202	3300021086	Vadose Zone Soil	MSIINRPPEMAKREYELQEPIAVAVDKDATFIQSRPDHVVDSALKIVI
Ga0210400_103397341	3300021170	Soil	MSIINKPPEMVKREYELQEPIAVAVEKYAAFIQST
Ga0210389_108892242	3300021404	Soil	MSIINKPPEMVKREYELQEPIAVAVEKYAAFIASTPDHVVNSALKMV
Ga0210387_113570481	3300021405	Soil	MSIINKPPQHVKREYELEEPVALVVEKYATFIDSTPDHVVNSALKIVLWRDKHFMNWR
Ga0210387_118384942	3300021405	Soil	MSIINKPPEMVKREYELQEPIAVAVEKYAAFIASTPDHVVNSALKMVLWRDADFRRWRKQQQ
Ga0210386_105033302	3300021406	Soil	MSIINRPPEMVKREYELQEPIAVAVEKYATFIQSTPDHVVNSALKSVIW
Ga0210390_101920141	3300021474	Soil	MSIINKPPEMVKREYELQEPIAMAVEKYAAFIASTPD
Ga0210398_100870174	3300021477	Soil	MSIINKPPEMVKREYELQEPIALAVEKYATFIQSTPDHVVN
Ga0210410_107081932	3300021479	Soil	MSIINKPPEMVKREYELQEPIAVAVEKYATFIASTPDHVVNSALKMVLWRDADFRRWRKQQQS
Ga0210410_113020912	3300021479	Soil	MSIINKPPQHVKREYELEEPVALVVEKYATFIDSTPDHVVNSALKMLLWKDKHFMN
Ga0209438_11621922	3300026285	Grasslands Soil	MSIINKPPEMVKREYELQEPLAVAVEKYATFIQSTPDHVVNSTLKIVIWRDVEFRRWRK
Ga0209686_11537662	3300026315	Soil	MSIINRPPEMVKREYELQEPIAVAVEKYATFILSTP
Ga0209152_101976902	3300026325	Soil	MSIINKPPQHVKREYELEEPVALVVEKYATFIDSTPDHVVNSALKIVLWRGTSTS
Ga0209801_11076281	3300026326	Soil	MSIINKPPEMVKREYELQEPIAVAVEKYATFIQSTPDHVV
Ga0209801_11786461	3300026326	Soil	MSIINKPPAMVKREYELQDPVAQAVEKYAIFIQSTPDHIVNSALKMVIWKDAE
Ga0209158_10805752	3300026333	Soil	MSIINRPPEMVKREYELQEPIAVAVEKYATFIQSTPDHVVDSAL
Ga0209158_12770012	3300026333	Soil	MSINNKPPEMVKREYELQEPIAVAVEKYATFIQSTPDHV
Ga0209057_11238171	3300026342	Soil	MSIINRPPEIVKREYELQEPIAVAVEKYATFIQSTPDHVVNSALKIVI
Ga0209806_11052561	3300026529	Soil	MSIINKPPEMVKREYELQEPIAVAVEKYATFIQSTPDHVVNSALKIVIWR
Ga0209474_106266201	3300026550	Soil	MSIINKPPQHVKREYELEEPVALVVEKYATFIDSTPDHVVNSA
Ga0209648_103740901	3300026551	Grasslands Soil	MSIINKPPQHVKREHELEEPVALVVEKYAAFIDSTP
Ga0179593_10491021	3300026555	Vadose Zone Soil	MVKREYELQDPVAQAVEKYAIFIQSTPDHVVNSALKMVIWKDAEFRRWRKHSRQIRNAKKVQ
Ga0179587_101420241	3300026557	Vadose Zone Soil	MSIINKPPAMVKREYELQDPVAQAVEKYAIFIQSTPDHVVNSALKMVIWKDAEFRRWRK
Ga0179587_109333031	3300026557	Vadose Zone Soil	MSIINKPPERVKRECQLQEPIVVAVEKYAAFVASRPDHVVNSALKMVLRT
Ga0207741_10173281	3300026941	Tropical Forest Soil	MSIINKPPDMVKREYELQEPIALAVEKYATFIQSTPDHV
Ga0207776_10144233	3300027035	Tropical Forest Soil	MSIINKPPDMVKREYELQEPIALAVEKYATFIQSTPDHVVNSALKMVIWRDVE
Ga0208983_10775741	3300027381	Forest Soil	MPILNKQPAIVKREYAIEEPVALVVERYAAFIQSTPDY
Ga0209527_10015397	3300027583	Forest Soil	MSIINRPPEMVKREYELQEPIAVAVEKYATFIQSTPDHV
Ga0209076_12281461	3300027643	Vadose Zone Soil	MSIINKPPQHVKREYQSEEPVALVVEKYATFIDSTPDH
Ga0207826_11397561	3300027680	Tropical Forest Soil	MSIINKPPDMVKREYELQEPIALAVEKYATFIQSTPD
Ga0209446_10201443	3300027698	Bog Forest Soil	MSIINRPPELVKRQYELQEPIAVAVEKYATFIQST
Ga0209248_102052551	3300027729	Bog Forest Soil	MSIINKPPEMVKREYELQEPIAVAVEKYAAFIASTPDH
Ga0209039_102292291	3300027825	Bog Forest Soil	MSIINKPPEMVKREYELQEPIAVAVEKYAAFIASTPDHVVN
Ga0209693_104959792	3300027855	Soil	MSIINKPSEMVKREYELQEPIAVAVEKYATFIQSTPDHVVNSALKMVIWRDA
Ga0209283_106254442	3300027875	Vadose Zone Soil	MPIINKQPAIVKREYAIEEPVALVVERYAAFIQSTPDYVVNSAL
Ga0209590_105223961	3300027882	Vadose Zone Soil	MSIINKPPEMVKREYELQEPIAVAVEKYATFIQSTPDHVVNSALKIEIWR
Ga0209380_104505251	3300027889	Soil	VKREYELQEPIAIAVDKDATFIQSTPDHVVDSALKIVIGEMWSSAAGSGPRK
Ga0209067_101184461	3300027898	Watersheds	MSIINKPPQHVKREYELEEPVALVVEKYATFIDSTPDHVVNSALKIVLWRDRHFMNWRKQQQ
Ga0209698_101221381	3300027911	Watersheds	MSIINKPPEMVKREYELQEPIAVAVEKYATFIASTPDHVVNSALKMVLWRDADFRRWRKQQQA
Ga0209069_101048402	3300027915	Watersheds	MPIINKQPAIVKREYAIEEPVALVVERYAAFIQSTPDY
Ga0222749_104018792	3300029636	Soil	MSIINKPPEMVKREYELQEPIALAVEKYATFIASTPDHVVNSALKMVLW
Ga0311339_115005971	3300029999	Palsa	MSIINKPPEMVKREYELQEPIAVAVEKYAAFIASTPDHVVNSALKMVLWRDTDFRR
Ga0073994_122524602	3300030991	Soil	MSIINKPPEMVKREYELQEPIALAVEKYAAFIASTPDHVVNSALKMVLWRDADFRRWR
Ga0073994_124041432	3300030991	Soil	MSIINKPPQHVKREYELEEPVALVVEKYATFIDSTPDHVVNSALKMLLWKDKHFMNWRKQQQ
Ga0170824_1186097392	3300031231	Forest Soil	MSVINKPPQHVKREYELEEPVALVVEKYATFIDSTP
Ga0170820_135776141	3300031446	Forest Soil	MSIINKPPEIVKRQYELEDPVAQAVDKYALFIQSTPDHVVNSALKMVIWKDAEFR
Ga0170818_1144587631	3300031474	Forest Soil	MSIINKPPEMVKREYELQEPVAVAVEKYAAFIQSTPDHVVNSALKM
Ga0307475_100928461	3300031754	Hardwood Forest Soil	VLNKPLEMVKREYELQEPIVVAVEKRATFIQSTPDHVV
Ga0307478_113387312	3300031823	Hardwood Forest Soil	MSIINKPPQHVKREYELEEPVALVVEKYATFIDGTPDHVVNSALKMLLWKDKH
Ga0306925_107408971	3300031890	Soil	MSIINKPPQHVKREYELEEPVALVVEKYATFIDSTPDHVVNSALKIVLWRDRHFMN
Ga0310913_112055891	3300031945	Soil	MSIINKPPQHVKREYELEEPVALVVEKYATFIDSTPDHVVNSALKM
Ga0307479_100089295	3300031962	Hardwood Forest Soil	MSVLNKPLEMVKREYELQEPIVVAVEKRATFIQSTPDHVV
Ga0307470_103930781	3300032174	Hardwood Forest Soil	MSIINKPPQHVKCEYELEEPVALVVEKYATFIDSTPDHVVNSALKMLLWKDKHFMNWR
Ga0315270_111043382	3300032275	Sediment	MSIINKPPEMVKREYELQEPVAVAVEKYAAFIESTTDHVVNSALKMLLWKDA
Ga0335078_125462812	3300032805	Soil	MSIINKPPEMVKREYELQEPIALAVDKYATFIQSTPDH
Ga0335080_108068311	3300032828	Soil	MSIINKPPEMVKREYELQEPVAAAVEKYASFIQSTPDHVVNSALKMVIWRDVEFRRWRKQ
Ga0335071_101171094	3300032897	Soil	MSIINKPPEMVKREYELQEPIALAVEKYATFIQSTPDHVVNSALKMVIWRDVEFRRWRK
Ga0335076_113405202	3300032955	Soil	MSIINKPPQHVKREYELEEPVALVVEKYATFIDSTPDHVVNSALKML
Ga0326728_106529712	3300033402	Peat Soil	MSIINKPPQHVKREYELEEPVALVVEKYATFIDSTPDHVVNSALKMLLWKDK
Ga0326727_100788911	3300033405	Peat Soil	MSIINKPPQHVKREYELEEPVALVVEKYATFIDSTPDHVVNSALKMLLWKDKHFMNWRKQQQQ

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055018

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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