Metagenome / Metatranscriptome Family F055049

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055049
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	63 residues
Representative Sequence	NAMFMRQPEKGEEHLPVSLAMRAALAVTGLATLYIGIMPNRFIEAVNWALGIAQNPNVAKLMR
Number of Associated Samples	125
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.16 %
% of genes near scaffold ends (potentially truncated)	95.68 %
% of genes from short scaffolds (< 2000 bps)	91.37 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.367 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (10.791 % of family members)
Environment Ontology (ENVO)	Unclassified (23.022 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.712 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.05% β-sheet: 0.00% Coil/Unstructured: 54.95%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF09527	ATPase_gene1	60.43
PF03899	ATP-synt_I	7.91
PF00119	ATP-synt_A	6.47
PF00137	ATP-synt_C	2.16
PF00248	Aldo_ket_red	1.44
PF00168	C2	1.44
PF00361	Proton_antipo_M	1.44
PF10518	TAT_signal	1.44
PF01833	TIG	0.72
PF13673	Acetyltransf_10	0.72
PF03707	MHYT	0.72
PF00583	Acetyltransf_1	0.72
PF02826	2-Hacid_dh_C	0.72
PF00571	CBS	0.72
PF14534	DUF4440	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG3312	FoF1-type ATP synthase accessory protein AtpI	Energy production and conversion [C]	7.91
COG0356	FoF1-type ATP synthase, membrane subunit a	Energy production and conversion [C]	6.47
COG0636	FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K	Energy production and conversion [C]	2.16
COG3300	MHYT domain, NO-binding membrane sensor	Signal transduction mechanisms [T]	0.72
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.37 %
Unclassified	root	N/A	8.63 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.37 %
Unclassified	root	N/A	8.63 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.37 %
Unclassified	root	N/A	8.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	77.70 %
Unclassified	root	N/A	8.63 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	46.04 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	22.30 %
Unclassified	root	N/A	8.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.04 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	22.30 %
Unclassified	root	N/A	8.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.04 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	22.30 %
Unclassified	root	N/A	8.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.04 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	10.07 %
Unclassified	root	N/A	8.63 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	46.04 %
Unclassified	root	N/A	8.63 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459005\|F1BAP7Q02G0BD9	Not Available	511	Open in IMG/M
3300000789\|JGI1027J11758_12039403	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	630	Open in IMG/M
3300001356\|JGI12269J14319_10299239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300001593\|JGI12635J15846_10554564	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	672	Open in IMG/M
3300002245\|JGIcombinedJ26739_100440882	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1180	Open in IMG/M
3300004080\|Ga0062385_10804324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	616	Open in IMG/M
3300004091\|Ga0062387_100247170	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1113	Open in IMG/M
3300004119\|Ga0058887_1231325	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	665	Open in IMG/M
3300004631\|Ga0058899_10483306	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300005167\|Ga0066672_10465517	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	824	Open in IMG/M
3300005174\|Ga0066680_10081740	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1951	Open in IMG/M
3300005332\|Ga0066388_108712945	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	504	Open in IMG/M
3300005436\|Ga0070713_101813031	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	592	Open in IMG/M
3300005439\|Ga0070711_100962750	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	731	Open in IMG/M
3300005529\|Ga0070741_10331262	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1419	Open in IMG/M
3300005533\|Ga0070734_10380633	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	805	Open in IMG/M
3300005533\|Ga0070734_10850099	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	517	Open in IMG/M
3300005541\|Ga0070733_11228626	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	501	Open in IMG/M
3300005542\|Ga0070732_10763125	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300005568\|Ga0066703_10330701	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	918	Open in IMG/M
3300005602\|Ga0070762_10484936	All Organisms → cellular organisms → Bacteria → Acidobacteria	808	Open in IMG/M
3300005610\|Ga0070763_10058646	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1850	Open in IMG/M
3300005610\|Ga0070763_10847220	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	542	Open in IMG/M
3300005712\|Ga0070764_10643976	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	649	Open in IMG/M
3300005875\|Ga0075293_1060008	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	558	Open in IMG/M
3300005921\|Ga0070766_10690697	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	690	Open in IMG/M
3300005952\|Ga0080026_10011222	All Organisms → cellular organisms → Bacteria	2105	Open in IMG/M
3300006028\|Ga0070717_10016518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5723	Open in IMG/M
3300006175\|Ga0070712_101409616	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300006175\|Ga0070712_101553394	Not Available	579	Open in IMG/M
3300006800\|Ga0066660_10617479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	904	Open in IMG/M
3300009038\|Ga0099829_10888072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300009174\|Ga0105241_10087245	All Organisms → cellular organisms → Bacteria → Acidobacteria	2456	Open in IMG/M
3300009637\|Ga0116118_1194156	All Organisms → cellular organisms → Bacteria → Acidobacteria	639	Open in IMG/M
3300009683\|Ga0116224_10056348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1917	Open in IMG/M
3300009700\|Ga0116217_10107090	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1907	Open in IMG/M
3300009792\|Ga0126374_11131739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300009824\|Ga0116219_10161734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1291	Open in IMG/M
3300010358\|Ga0126370_10285615	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1300	Open in IMG/M
3300010361\|Ga0126378_13398571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300010373\|Ga0134128_11026741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	911	Open in IMG/M
3300010376\|Ga0126381_100986609	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300011120\|Ga0150983_11053109	Not Available	653	Open in IMG/M
3300012208\|Ga0137376_11765328	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	509	Open in IMG/M
3300012209\|Ga0137379_10818567	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300012357\|Ga0137384_10607542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300012685\|Ga0137397_10988228	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300012989\|Ga0164305_10805573	All Organisms → cellular organisms → Bacteria → Acidobacteria	780	Open in IMG/M
3300014200\|Ga0181526_11054515	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300015241\|Ga0137418_10624244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	841	Open in IMG/M
3300015357\|Ga0134072_10258905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300015357\|Ga0134072_10348182	Not Available	568	Open in IMG/M
3300015371\|Ga0132258_10227448	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4542	Open in IMG/M
3300016357\|Ga0182032_12054017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	502	Open in IMG/M
3300016404\|Ga0182037_12081667	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300017823\|Ga0187818_10147532	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1023	Open in IMG/M
3300017924\|Ga0187820_1170082	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300017924\|Ga0187820_1250559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300017930\|Ga0187825_10062901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1262	Open in IMG/M
3300017933\|Ga0187801_10337834	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	618	Open in IMG/M
3300017936\|Ga0187821_10389684	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300017943\|Ga0187819_10357368	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300017943\|Ga0187819_10398772	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300017943\|Ga0187819_10668923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300017946\|Ga0187879_10716650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300017955\|Ga0187817_10174561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1368	Open in IMG/M
3300017961\|Ga0187778_10100920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1793	Open in IMG/M
3300017973\|Ga0187780_10882186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300017973\|Ga0187780_10939465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	629	Open in IMG/M
3300017995\|Ga0187816_10056098	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1654	Open in IMG/M
3300017995\|Ga0187816_10143066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1034	Open in IMG/M
3300017999\|Ga0187767_10340264	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	524	Open in IMG/M
3300018003\|Ga0187876_1150400	All Organisms → cellular organisms → Bacteria → Acidobacteria	814	Open in IMG/M
3300018007\|Ga0187805_10332346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	701	Open in IMG/M
3300018012\|Ga0187810_10290460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300018062\|Ga0187784_10376614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1149	Open in IMG/M
3300018085\|Ga0187772_10034272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3036	Open in IMG/M
3300018085\|Ga0187772_10137346	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1607	Open in IMG/M
3300018086\|Ga0187769_10147923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1718	Open in IMG/M
3300018088\|Ga0187771_11461467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300018431\|Ga0066655_10100986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1616	Open in IMG/M
3300018468\|Ga0066662_10319369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1317	Open in IMG/M
3300019275\|Ga0187798_1124487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300019786\|Ga0182025_1302429	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300019890\|Ga0193728_1149907	All Organisms → cellular organisms → Bacteria → Acidobacteria	1027	Open in IMG/M
3300020580\|Ga0210403_10771458	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300020583\|Ga0210401_10563761	All Organisms → cellular organisms → Bacteria → Acidobacteria	1001	Open in IMG/M
3300021168\|Ga0210406_10583363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300021171\|Ga0210405_11323893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300021401\|Ga0210393_10208986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1579	Open in IMG/M
3300021401\|Ga0210393_10377227	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300021404\|Ga0210389_10138981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1881	Open in IMG/M
3300021407\|Ga0210383_11463473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300021433\|Ga0210391_10138016	Not Available	1920	Open in IMG/M
3300021433\|Ga0210391_10153586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1813	Open in IMG/M
3300021560\|Ga0126371_10188731	All Organisms → cellular organisms → Bacteria	2150	Open in IMG/M
3300022532\|Ga0242655_10078179	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300022717\|Ga0242661_1103782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300025134\|Ga0207416_1243456	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300025854\|Ga0209176_10194118	Not Available	519	Open in IMG/M
3300025914\|Ga0207671_10686285	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	815	Open in IMG/M
3300025929\|Ga0207664_10064834	All Organisms → cellular organisms → Bacteria → Acidobacteria	2923	Open in IMG/M
3300025929\|Ga0207664_11674579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300025992\|Ga0208775_1020203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300026004\|Ga0208416_1007385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	841	Open in IMG/M
3300026078\|Ga0207702_10734785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	974	Open in IMG/M
3300026538\|Ga0209056_10633505	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	539	Open in IMG/M
3300026551\|Ga0209648_10577536	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300026869\|Ga0207821_1018510	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300026921\|Ga0207860_1033003	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300027035\|Ga0207776_1020537	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300027480\|Ga0208993_1097802	Not Available	537	Open in IMG/M
3300027537\|Ga0209419_1111125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300027565\|Ga0209219_1029905	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300027645\|Ga0209117_1039089	Not Available	1448	Open in IMG/M
3300027652\|Ga0209007_1007879	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2844	Open in IMG/M
3300027667\|Ga0209009_1086571	All Organisms → cellular organisms → Bacteria → Acidobacteria	794	Open in IMG/M
3300027842\|Ga0209580_10313603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300027867\|Ga0209167_10010827	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4330	Open in IMG/M
3300027875\|Ga0209283_10021718	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3942	Open in IMG/M
3300027905\|Ga0209415_10986857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300027908\|Ga0209006_10336015	All Organisms → cellular organisms → Bacteria → Acidobacteria	1282	Open in IMG/M
3300028800\|Ga0265338_10929535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300030545\|Ga0210271_10877323	Not Available	759	Open in IMG/M
3300030706\|Ga0310039_10115998	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1107	Open in IMG/M
3300030743\|Ga0265461_11013607	Not Available	823	Open in IMG/M
3300030862\|Ga0265753_1008648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1278	Open in IMG/M
3300031231\|Ga0170824_123345532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1156	Open in IMG/M
3300031474\|Ga0170818_101862697	Not Available	610	Open in IMG/M
3300031474\|Ga0170818_105118956	Not Available	573	Open in IMG/M
3300031718\|Ga0307474_10783954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300031823\|Ga0307478_10401388	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300031946\|Ga0310910_11370273	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300032205\|Ga0307472_102346296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300032261\|Ga0306920_101192389	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300032783\|Ga0335079_10098944	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3308	Open in IMG/M
3300032828\|Ga0335080_10154555	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2540	Open in IMG/M
3300033158\|Ga0335077_10742632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1006	Open in IMG/M
3300034091\|Ga0326724_0424137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.40%
Host-Associated	Host-Associated	3.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.30%
Aquatic	Environmental → Aquatic	15.11%
Plants	Host-Associated → Plants	3.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.58%
Freshwater	Environmental → Aquatic → Freshwater	14.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.16%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.44%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.72%
Peat	Environmental → Terrestrial → Peat	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.48%
Loam	Environmental → Terrestrial → Soil → Loam	20.14%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	14.39%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.44%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.30%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.11%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.51%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	10.07%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.04%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.60%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.44%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.72%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	10.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.63%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.47%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.04%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.04%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.16%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.16%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.16%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.16%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.16%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	2.16%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.44%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.44%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.72%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.72%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.72%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.72%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.72%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.72%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459005	Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004119	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF210 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005875	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009637	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025134	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG (SPAdes)	Environmental	Open in IMG/M
3300025854	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025992	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104 (SPAdes)	Environmental	Open in IMG/M
3300026004	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302 (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026869	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 53 (SPAdes)	Environmental	Open in IMG/M
3300026921	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 28 (SPAdes)	Environmental	Open in IMG/M
3300027035	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 30 (SPAdes)	Environmental	Open in IMG/M
3300027480	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300030545	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO033SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034091	Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E41_07083500	2170459005	Grass Soil	KIANAMFMGKVEKSEETLPISLSMRAAIAVTGLATLYIGLLPDGFIRIVNWALGIAQNPNVAKL
JGI1027J11758_120394031	3300000789	Soil	NAMFMRQPEKGEEKLPVSLAMRVALGLTGLATLYIGILPNRFIEMVNWALGIAQRSNVAKLMH*
JGI12269J14319_102992392	3300001356	Peatlands Soil	REAEKGAEGLPVSYAMRLALGIAGFATVFIGVLPNTFIEMVNWAWGIAKNPAVAKLIQ*
JGI12635J15846_105545641	3300001593	Forest Soil	MFMGQVEKGEEKLRVSLTMRAALALTALATIYIGILPNRFIEIVNWALGIAQNPSVAKLVR*
JGIcombinedJ26739_1004408823	3300002245	Forest Soil	YYYLKIANAMFMRQPEKGEERLPISYGMRVGLGVTAFATVFIGVMPNRFIEMANWALGIAQNPNTAKLIH*
Ga0062385_108043242	3300004080	Bog Forest Soil	KGEDKLPVSLTMRAAIAVAAIATLYIGLLPNSFIQMANWALGIVQNPAVARLTH*
Ga0062387_1002471703	3300004091	Bog Forest Soil	AMFMGKVETGEEKLPVSLAMRAALTLTGLATLYIGILPNRFIEIVNWALGIAQNPSIAKLTH*
Ga0058887_12313251	3300004119	Forest Soil	YLKIANAMFMGKTEKGEERLPVSLTMRAAIAVSAIATLYIGLLPNRFIELVNWALGIAQNPSVARLTH*
Ga0058899_104833061	3300004631	Forest Soil	AMFMGQVEKGEERLPVSLSMRAAVSISALATLYIGIMPNRFIELVNWALGIAQHPSVAKLIQ*
Ga0066672_104655171	3300005167	Soil	EETLPVSYAMRAALAVTGIATVYIGIMPNRFIELVNWSLGIAQSPNVAKLVH*
Ga0066680_100817401	3300005174	Soil	LKIANAMFMRQAEAGEERLPVSLGMRTALGLTGFATVFIGIMPDRFIQIVNWALGIAQNPAVAKIVR*
Ga0066388_1087129451	3300005332	Tropical Forest Soil	EKLQVSFAMRVALGVSGLATLYIGILPNRFIEAVNWALGIAQNANVAGMMR*
Ga0070713_1018130312	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LYYYLKIANAMFMRQPEKGEDRLPVSIAMRAALAVTGLATIYIGILPNQFIELVNWALGIAQQNPSVAKLVQ*
Ga0070711_1009627501	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	AMFMRQPEKGEERLPISLAMRAALAVTGLATIYIGILPNQFIQAVNWAVNLEKASNVAQLMR*
Ga0070741_103312622	3300005529	Surface Soil	MREPEKGEGRLPVSYAMRAALALTGLATVYIGVLPNRFIELANWALGLAQSTNVAKLVH*
Ga0070734_103806331	3300005533	Surface Soil	YYLKIANAMFMRQPENGEEKLPVSYAMRAALTLTGFATLYIGILPNRFIELANWALGLAQASSVAQLIR*
Ga0070734_108500992	3300005533	Surface Soil	VFYSVFGLYYYLKIANAMFMRQPEKGEEHLPISYAMRAALTVTGFATLFIGIMPNRFIELVNWSLGIAQNPNVAKLVR*
Ga0070733_112286261	3300005541	Surface Soil	KGEETLAVSYTMRAALGVAALATLYIGILPNRFIELVNWALGIVQNPAIAKLTH*
Ga0070732_107631251	3300005542	Surface Soil	FMGKVEKGEEKLPISFTMRAALGLTALVTVYIGVMPNRFIELANWALGIVQNPAVAKLTH
Ga0066703_103307012	3300005568	Soil	YYYLKIANAMFMGKAEKAEETLPISFPMRAAIAVAGIATLYIGLLPNSFIELVNWTLGITRT*
Ga0070762_104849363	3300005602	Soil	MFMRQPEAGEGRLPVSYAMRTALGVTAFATIFIGVLPNRFIELVNWALGIAQSPAVAKLTH*
Ga0070763_100586461	3300005610	Soil	EAEKGEEKLPISLAMGAALTVTGFATLYIGILPNQFIELANWALGIAQNPDVAKLIH*
Ga0070763_108472201	3300005610	Soil	AMFMREPEKGEERLPVSLAMRAALGITALATIYIGVMPNRFIEIVNWSLGIAKTASVAKLVH*
Ga0070764_106439762	3300005712	Soil	VEKNEEILPVSLSMRAAIAVAAMATLYIGLLPNSFIELVNWALGIAQNPATAKLVH*
Ga0075293_10600082	3300005875	Rice Paddy Soil	VFGLYYYLKIANAMFMRQPEKGEERLPISLGMRAALALTGLATVYIGIMPNRFIEFVNWSLGIAQNPNVAKLIH*
Ga0070766_106906971	3300005921	Soil	VLYSVFGLYYYLKIANAMFMRQPEKGEERLPVSYGMRVGLGITAFATVFIGVMPNRFIEMANWALGIAQNPNTAKLIH*
Ga0080026_100112225	3300005952	Permafrost Soil	YYYLKIANAMFMGKVEKGEETLAVSYTMRAALGVAALATLYIGILPNRFIELVNWALGIAQNPAVAKLTH*
Ga0070717_100165181	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	AMFMGKVEKTEETLPVSLSMRAAIAVTGLATLYIGLLPDGFIRLVNWALGIAQNPSVAKLTQ*
Ga0070712_1014096163	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VEKGEEKLPVSLTMRAALGVTALATLYIGILPNRFIELVNWALGIAQNPAIANLTH*
Ga0070712_1015533941	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VEKTEETLPVSLSMRAAIAITGLATLYIGLLPDGFIRLVNWALGIAQNPSVAKLTQ*
Ga0066660_106174793	3300006800	Soil	GEETLPISYAMRAALAVTGIATVYIGIMPNRFIELVNWSLGIAQSPNVAKLVH*
Ga0099829_108880721	3300009038	Vadose Zone Soil	KIANAMFMRQAEAGEERLPVSLGMRTALALTGFATVFIGIMPDRFIQIVNWALGIAQNPSVAKLIR*
Ga0105241_100872451	3300009174	Corn Rhizosphere	YLKIANAMFMRHAEKGEETLPISYAMRAALAVTGIATVYIGIMPNRFIELVNWSLGIAQSPNVAKLVH*
Ga0116118_11941561	3300009637	Peatland	LPVSYAMRAALGLTGFATLFIGILPNQFIQMVNWALGIVQSAPVAKLVR*
Ga0116224_100563484	3300009683	Peatlands Soil	LYSVFGLYYYLKIANAMFMGQVEAGEEKLAVSYTMRAGIGIAAFATIFIGILPNRFIEVVNWALGIVQSPAVAKLVR*
Ga0116217_101070901	3300009700	Peatlands Soil	MFMGKVEKDEEKLPVSLSMRAAIAVTGIATLYIGLLPNSFIEIVNWALGIAQNPNLARLTH*
Ga0126374_111317391	3300009792	Tropical Forest Soil	MFMRQPEKGQERLPISFALRIAVAVTGLATLYIGLLPNQFIEMVNWALGIANQPNVAGLR
Ga0116219_101617341	3300009824	Peatlands Soil	KVEKGEERLPISLTMRAAMGLTGLATLYIGIMPNRFIEMVNWALGIAQNPAVARLTH*
Ga0126370_102856151	3300010358	Tropical Forest Soil	HGEEKLPVSLSMRIALAISGLATLYIGLLPNSFINLVNWALGLAQSPSVAKLTH*
Ga0126378_133985711	3300010361	Tropical Forest Soil	IANAMFMRQPEKGEERLPVSYAMRAALMVTGLATVYIGILPNRFIELVNWTLGIVQNPSVANLVR*
Ga0134128_110267413	3300010373	Terrestrial Soil	LKIANAMFMRQPEKGEERLPISLGMRVALALTGLATVYIGIMPNRFIEFVNWSLGIAQNPNVAKLIH*
Ga0126381_1009866093	3300010376	Tropical Forest Soil	KIANAMFMRQPEKGEERLPVSYAMRAALMVTGLATLYIGILPNRFIELVNWTLGIVQNPNVANLVR*
Ga0150983_110531091	3300011120	Forest Soil	LYSVFGLYYYLKIANAMFMGQVEKGEERLPVSLSMRAAVSISALATLYIGIMPNRFIELVNWALGIAQHPSVAKLIQ*
Ga0137376_117653281	3300012208	Vadose Zone Soil	YLKIANAMFMGKVEKSEETLPISLSMRAAIAVTGLATLYIGLLPDGFIRLVNWALGIKTGS*
Ga0137379_108185671	3300012209	Vadose Zone Soil	TLPISLSMRAAIAITGLATLYIGLLPDGFIRIVNWALGIAQNPDVARLTH*
Ga0137384_106075423	3300012357	Vadose Zone Soil	QPEKGHEERLPISYSMRAALAVAGIATIYIGIMPNRFIEIVNWALGIAQNPSVAKLVQ*
Ga0137397_109882283	3300012685	Vadose Zone Soil	EKGEEKLAVSYTMRAGIGVAALATLFIGIMPNRFIEVVNWALGIVQNPSVAKLVQ*
Ga0164305_108055731	3300012989	Soil	GLYYYLKIANAMFMRQPSKGEEKLPVSLGMRVALGITGLATIYIGIMPNKFIEWVNWTLGLAQHSSMAKLMH*
Ga0181526_110545151	3300014200	Bog	EEKLSISFTMRAALGLTALATLYIGVLPNRFIELVNWALGIAQNPAVAKLTH*
Ga0137418_106242441	3300015241	Vadose Zone Soil	PEEKEALPVSLAMRAALGLTGFATLYIGIMPNRFIQLVNWALGIAQNPSVAKLIR*
Ga0134072_102589051	3300015357	Grasslands Soil	IANAMFMRHAEKGEETLPISYAMRAALAVTGIATVYIGIMPNRFIELVNWSLGIAQSPNVAKLVH*
Ga0134072_103481821	3300015357	Grasslands Soil	LYYYLKIANAMFMGKAEKAEETLPISLPMRAAIAVAGISTLYIGLLPNSFIELVNWTLGITRT*
Ga0132258_102274481	3300015371	Arabidopsis Rhizosphere	KLPVSLAMRVALGLTGLATLYIGILPNRFIEIVNWALGIAQQPSVAKLMH*
Ga0182032_120540171	3300016357	Soil	EKGEERLSVSLAMRVALGVTGLATLYIGVNPEQFIRAVNWALGIVQQSSVANLTH
Ga0182037_120816671	3300016404	Soil	VFGLYYYLKIANAMFMRQPEKGEERLPISFAMRIAVAVTGLATLYIGLLPNQFIEMVNWALGIASQPNVAGLR
Ga0187818_101475321	3300017823	Freshwater Sediment	GEEHLPVSYAMRAALGITGFATLFIGIMPNRFIELVNWALGIAQNPSVAKLVR
Ga0187820_11700822	3300017924	Freshwater Sediment	VFGLYYYLKIANAMLMRQPEKGEEHLPVGYAMRAALGITGFATLFIGIMPNRFIELVNWALGIAQNPAVAKLIR
Ga0187820_12505591	3300017924	Freshwater Sediment	MFMGKVEKGEERLPISLTMRAALGLTGLATLYIGIMPNRFIELVNWALGIAQNPAVAKLT
Ga0187825_100629011	3300017930	Freshwater Sediment	LYYYLKIANAMFMRHAEKGEETLPISYAMRAALAVTGIATVYIGIMPNRFIELVNWSLGIAQSPNVAKLVH
Ga0187801_103378341	3300017933	Freshwater Sediment	NAMFMRQPEAGEEKLPVSYAMRAALGLTGFATLFIGILPNRFIEMVNWALGSVQNPAVAKLTH
Ga0187821_103896841	3300017936	Freshwater Sediment	NAMFMRQPEKGEEHLPVSLAMRAALAVTGLATLYIGIMPNRFIEAVNWALGIAQNPNVAKLMR
Ga0187819_103573681	3300017943	Freshwater Sediment	MFMRQPEKGEEKLPVSMAMRVALGLTGLATLYIGIMPNWFIEGVNWSLGITQHPSVAKMM
Ga0187819_103987721	3300017943	Freshwater Sediment	QPEKGEEHLPVSLAMRAALAVTGLATLYIGIMPNRFIEAVNWALGLAQNPNVAKLMR
Ga0187819_106689231	3300017943	Freshwater Sediment	NAMFMREAEKGEETLPVSYTMRAALGVTGFATLFIGIMPNRFIELVNWALGIASLPTTARLIH
Ga0187879_107166502	3300017946	Peatland	YSVFGLYYYLKIANAMFMGKVEKGEEKLSISFTMRAALGLTALATLYIGVLPNRFIELVNWALGIAQNPAVAKLTH
Ga0187817_101745611	3300017955	Freshwater Sediment	LKIANAMFMGKVEKSEERLPISLSMRAAIAVTGIATLYIGLLPNSFIELVNWALGIAQNPSVARLTH
Ga0187778_101009204	3300017961	Tropical Peatland	QPEKGEEHLPVSYAMRAALGVTGFATLFIGIMPNRFIELANWALNLAQNPSMAKLVR
Ga0187780_108821861	3300017973	Tropical Peatland	EKLPVSLAMRAALGITALATLYIGIMPNRFIEIVNWTMGIAHDPNVAKLMH
Ga0187780_109394651	3300017973	Tropical Peatland	GEERLPVSYTMRAALGVTGFATLFIGIMPNRFIELVNWALGLASNPTTAKLMH
Ga0187816_100560981	3300017995	Freshwater Sediment	HLPVSLAMRAALAVTGLATLYIGIMPNRFIEAVNWALGLAQNPNVAKLMR
Ga0187816_101430661	3300017995	Freshwater Sediment	KSEERLPISLSMRAAIAVTGIATLYIGLLPNSFIELVNWALGIAQNPSVARLTH
Ga0187767_103402642	3300017999	Tropical Peatland	YYYLKIANAMFMRQPEKGEERLPVSLAMRVALGVTGLATLYIGVNPEQFIRAVNWALGIVQQSNVANLTH
Ga0187876_11504003	3300018003	Peatland	FGLYYYLKIANAMFMRQPEKGEEKLPVSYAMRAALGLTGFATLFIGILPNQFIQMVNWALGIVQSAPVAKLVR
Ga0187805_103323461	3300018007	Freshwater Sediment	YYLKIANAMFMRQPEKGEEHLPVSLAMRAALAVTGLATLYIGIMPNRFIEALNWALGIAQNPNVAKLMR
Ga0187810_102904601	3300018012	Freshwater Sediment	KGEERLPVNWAMRLALGLTGLATVYIGIMPNWFIEMVNWALGIAQQPNVAKLVH
Ga0187784_103766143	3300018062	Tropical Peatland	VFGLYYYLKIANAMLMRQPEKGEEKLPVSYAMRAALGVTGFATLFIGVMPNQFIQMVNWALGIVQNPSVARLIR
Ga0187772_100342726	3300018085	Tropical Peatland	MRQPEKGEGRLPVSYAMRAALAVTGLATLYIGILPNRFIEMVNWALNIVQNPNVANLVR
Ga0187772_101373461	3300018085	Tropical Peatland	KGEEKLPVSLAMRAALGITALATLYIGILPNRFIEIVNWTLGIAHNPNVAKLMH
Ga0187769_101479234	3300018086	Tropical Peatland	YLKIANAMFMRQPEKGEEKLAVSYSMRAALALTGLMTIYIGILPDRFIELVNWALNIARSPTTHT
Ga0187771_114614671	3300018088	Tropical Peatland	LKIANAMFMRQPEKGEEKLPVSLAMRAALGLTGFATLFIGVMPNQFISMVNWALGIANNPSVARLVR
Ga0066655_101009864	3300018431	Grasslands Soil	YYLKIANAMFMRQPEQGEERLPVSLSMRIALAISGLATLYIGLLPNSFINMVNWALGLAQNPSVAKLTH
Ga0066662_103193691	3300018468	Grasslands Soil	ANAMFMRQPEQGEERLPVSLSMRIALAISGLATLYIGLLPNSFINLVNWALGLAQNPSVAKLTR
Ga0187798_11244873	3300019275	Peatland	LKIANAMFMRQPEKGEEKLPISFAMRAALGLTGLATIYIGIMPNRFIELVNWALGIAQNPSVAKLVR
Ga0182025_13024292	3300019786	Permafrost	QVEKGEESFRSALTMRAALTLSAAATIYIGILPNRFIELVNWAWA
Ga0193728_11499072	3300019890	Soil	VSLGMRAALGLSGLATLYIGVMPEQFIRLVNWSLGLAQNPALARLVRSARLLQ
Ga0210403_107714581	3300020580	Soil	YYLKIANAMFMGKVEKGEERLPVSLTMRVALGLTGLATLFIGILPNSSIELVNWALGIVQNPSVAKLTH
Ga0210401_105637613	3300020583	Soil	LKIANAVFMGKAEDKEPLPLSLGMRTALGLSGLATLYIGVMPEQFIRLVNWSLGLAQNPAVARFVR
Ga0210406_105833631	3300021168	Soil	LKIANAMFMGKVEESEETLPISLTMRAAIAVSAIATLYIGLLPNSFIELANWALGIAQNPNVAKLTH
Ga0210405_113238932	3300021171	Soil	GLYYYLKIANAMFMGQVDKGEEKLPISLTMRAALALTAAATIYIGILPNRFIELVNWTLGIAQNPAIAKLTH
Ga0210393_102089864	3300021401	Soil	SVFGLYYYLKVANAMFMRQPEAGEERLPVSHAMRFALAVTAFATIYIGVLPNRFIEIVNWALGLVQNPNIARLTH
Ga0210393_103772272	3300021401	Soil	YSVFGLYYYLKIANAMFMGQVEKGEERLPVSLSMRAAVSISALATLYIGIMPNRFIELVNWALGIAQHPSVAKLIQ
Ga0210389_101389814	3300021404	Soil	YLKIANAMFMREAEKGEEKLPISLAMGAALTVTGFATLYIGILPNQFIELANWALGIAQNPDVAKLIH
Ga0210383_114634731	3300021407	Soil	GEEKLPVSYAMRAAIALTGMATLYIGLLPNRFIELVNWALGIAQSPSVAKLIH
Ga0210391_101380161	3300021433	Soil	KGEERLPVSLSMRAAVSISALATLYIGIMPNRFIELVNWALGIAQHPSVAKLIQ
Ga0210391_101535864	3300021433	Soil	KLPISLAMRAALTLTAAATLYVGILPNRFIELVNWALGIAQNPAIAKLTH
Ga0126371_101887315	3300021560	Tropical Forest Soil	KIANAMFMRQPEKGEERLPISFAMRIAVAVTGLATLYIGLLPNQFIEMVNWALGIANQPNVAGLR
Ga0242655_100781793	3300022532	Soil	ANAMFMRQPEKGEEKLPVSLAMRVALGLTGLATLYIGIMPNRFIEIVNWALGIAQQSKVANLMH
Ga0242661_11037821	3300022717	Soil	AMFMGKTEKGEERLPVSLTMRAAIAVSAIATLYIGLLPNSFIELVNWALGIAQNPSVARLTH
Ga0207416_12434561	3300025134	Iron-Sulfur Acid Spring	VYYYLKIANAMFMGQVEKGEESLPVSLTLRAAVGVSALATLYIGILPNRFIELVNWALGIAQHPSIAKLTR
Ga0209176_101941182	3300025854	Arctic Peat Soil	YLNIANAMFMGKVEKSEEKLPISLSMRAAIAVTGIATLYIGLLPNSFIELVNWALGIAQNPNVANLTH
Ga0207671_106862853	3300025914	Corn Rhizosphere	LYYYLKIANAMFMRHAEKGEETLPISYAMRAALAVTGIATVYIGIMPDRFIQLVNWSLGIAQSPNVAKLVH
Ga0207664_100648341	3300025929	Agricultural Soil	VFGLYYYLKIANAMFMRHAEKGEETLPISYAMRAALAVTGIATVYIGIMPNRFIELVNWSLGIAQSPNVAKLVH
Ga0207664_116745791	3300025929	Agricultural Soil	KIANAMFMRQPEKGEGRLPISLAMRAALAVTGLATIYIGILPDQFIQAVNWAVNLEKASNVAKLMH
Ga0208775_10202032	3300025992	Rice Paddy Soil	KGEERLPISLGMRAALALTGLATVYIGIMPNRFIEFVNWSLGIAQNPNVAKLIH
Ga0208416_10073853	3300026004	Rice Paddy Soil	NAMFMRQPEKGEERLPISLGMRAALALTGLATVYIGIMPNRFIEFVNWSLGIAQNPNVAKLIH
Ga0207702_107347853	3300026078	Corn Rhizosphere	GLYYYLKIANAMFMRQPEKGEGRLPISLGMRAALALTGLATVYIGIMPNRFIEFVNWSLGIAQNPNVAKLIY
Ga0209056_106335052	3300026538	Soil	SVFGLYYYLKIANAVFMGKAEEKEPLPVSLGMRAALGLSGFATLYIGVMPEQFIRLVNWSLGLAQNPAVARLVRQARLLQ
Ga0209648_105775361	3300026551	Grasslands Soil	LYYYLKIANAVFMGQAEEKEPLPVSLGMRAALGLSGLATLYIGVMPEQFIRLVNWSLGLAQNPAVARFVR
Ga0207821_10185102	3300026869	Tropical Forest Soil	SVFGLYYYLKIANAMFMGKVEKGEEKLPVSLAMRVAVGVAGLATLYIGIMPDSFIQLVNWALGIVQNPGVARLTH
Ga0207860_10330032	3300026921	Tropical Forest Soil	NAMFMGKVEKGEEKLPVSLAMRVAVGVAGLATLYIGIMPDSFIQLVNWALGIVQNPGVARLTH
Ga0207776_10205373	3300027035	Tropical Forest Soil	VEKGEEKLPVSLAMRVAVGVAGLATLYIGIMPDSFIQLVNWALGIVQNPGVARLTH
Ga0208993_10978022	3300027480	Forest Soil	LYSVFGLYYYLKIANAVFMGKAEEKEPLPVSLGMRAALGLSGLATLYIGVMPEQFIRLVNWSLGLAQNPAVARLVR
Ga0209419_11111251	3300027537	Forest Soil	GEVERGEEKLPISLTMRAALGLTALATLYIGILPNQFIKLVNWALGLAQNPAIAKLMH
Ga0209219_10299053	3300027565	Forest Soil	MFMGKVEKGEEKLPLSLTMRAALALTALATLYIGILPNRFIELVNWALGIAQNPAIAKLT
Ga0209117_10390892	3300027645	Forest Soil	EKLPVSLTMRAALGVTALATLYIGILPNRFIELVNWALGLAQNPAIAKLTH
Ga0209007_10078791	3300027652	Forest Soil	FMGQVEKGEEKLPISLAMRAALTLTAAATLYVGILPNRFIELVNWALGIAQNPAIAKLTH
Ga0209009_10865711	3300027667	Forest Soil	EKGEEKLPISLTMRAALALTALATLYIGILPNRFIELVNWALGIAQNPAIAKLTH
Ga0209580_103136031	3300027842	Surface Soil	EKLPVSFGMRTALGITALATLWIGIMPEHFIRIVNWALGIAQNPAVAKLVR
Ga0209167_100108276	3300027867	Surface Soil	GVLYSVFGLYYYLKIANAMFMGKVEKGEEKLAISFTMRAALGLTALATLYIGILPNQFIGLVNWALGIVQNPAVAKLTH
Ga0209283_100217186	3300027875	Vadose Zone Soil	SLGVLYSVFGLYYYLKIANAMFMRQAEAGEERLPVSLGMRTALALTGFATVFIGIMPDRFIQIVNWALGIAQNPSVAKLIR
Ga0209415_109868571	3300027905	Peatlands Soil	SVFGLYYYLKIANAMFMGQAEKGEEKLPVSLTMRAGIAVAGIATLYIGLLPNSFIQMVNWALGIAQVPSVAKLVH
Ga0209006_103360152	3300027908	Forest Soil	LKIANAMFMGQVEKGEERLPVSLSMRAAVSISALATLYIGIMPNRFIELVNWALGIAQRPSVAKLIQ
Ga0265338_109295353	3300028800	Rhizosphere	EEKLAVSLSMRAAIAVTGIATLYIGLLPNSFIELVNWALGIAQNTNVAKLTH
Ga0210271_108773232	3300030545	Soil	MGKVEKGEEKLAISFTMRAALGLTALATLYIGILPNQFIELVNWALGIA
Ga0310039_101159983	3300030706	Peatlands Soil	MGKVEKGEERLPISLTMRAAMGLTGLATLYIGIMPNRFIEMVNWALGIAQNPAVARLTH
Ga0265461_110136071	3300030743	Soil	MGKVEKGEEKLAISFTMRAALGLTALATLYIGILPNQFIELVNWALGIAKRKRRGK
Ga0265753_10086483	3300030862	Soil	GLYYYLKIANAMFMGQVDKGEEKLPISLTMRAALTLTAAATIYIGILPNRFIELVNWTLGIAQNPAIAKLTH
Ga0170824_1233455321	3300031231	Forest Soil	MFMGKAEKGEETLPISLTMRAAIAVSAIATLYIGLLPNSFIELVNWALGIAQNPATAKLV
Ga0170818_1018626972	3300031474	Forest Soil	GLYYYLKIANAMFMGKVEKTEETLPVSLSMRAAIAITGLATLYIGLLPDGFIRLVNWALGIAQNPSLAKLTQ
Ga0170818_1051189561	3300031474	Forest Soil	ANAMFMGKTEKGEEKLPISLPMRAAIAVSAMATLYIGLLPNSFIELVNWALGIAQNPATARLTH
Ga0307474_107839543	3300031718	Hardwood Forest Soil	AMFMRQPAKGEEKLPVSLAMRAALGITALATIYIGVMPNQFIEIVNWSLGIAKTASVAKLVH
Ga0307478_104013881	3300031823	Hardwood Forest Soil	GLYYYLKIANAMFMGHVEKGEEKLRVSLTMRAALALTALATLYIGILPNRFIELVNWALGIAQNPAIAKLTH
Ga0310910_113702732	3300031946	Soil	YYLKIANAMFMRQPEKGEERLPISFAMRIAVAVTGLATLYIGLLPNQFIEMVNWALGIASQPNVAGLR
Ga0307472_1023462962	3300032205	Hardwood Forest Soil	VFGLYYYLKIANAMFMRQPEKGEEKLPVSLAMRVAVGLAGLATLYIGIMPNRFIEIVNWALGIAQQSNVANRMH
Ga0306920_1011923891	3300032261	Soil	PEKGEEKLPVSWTMRLALGLTGLATLYIGIMPNRFIEIVNWALGIAHQANVAKM
Ga0335079_100989446	3300032783	Soil	MFMGKVEKGEESLPVSFTMRAAIGLTALATLYIGILPNSFIQVVNWVWGIVQNPAVAQLT
Ga0335080_101545551	3300032828	Soil	YYLKIANAMFMGKVEKGEEVLPVSLTMRAAIAVTGIATLYIGLLPNSFIELVNWSLGIVQNPSVARLVR
Ga0335077_107426321	3300033158	Soil	LPVSFAMRTALGVTGLATLVIGILPNQFIQMVNWALGIVQNPAVAKLTQ
Ga0326724_0424137_542_697	3300034091	Peat Soil	KGEEKLSVSLSMRTALAVTGLATLYIGIMPNRFIEIVNWALGIVQHPGART

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055049

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences