Metagenome / Metatranscriptome Family F055059

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055059
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	70 residues
Representative Sequence	VATASAVLFGVGAIGLGVVLIFTDLLPLSGVGTGVGAAVGGLTVLLTVVYGVREMRNAEKAEESEDAE
Number of Associated Samples	111
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.85 %
% of genes near scaffold ends (potentially truncated)	68.35 %
% of genes from short scaffolds (< 2000 bps)	69.78 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.360 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.827 % of family members)
Environment Ontology (ENVO)	Unclassified (25.899 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.446 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.58% β-sheet: 0.00% Coil/Unstructured: 35.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF04261	Dyp_perox	9.35
PF04672	Methyltransf_19	7.19
PF00248	Aldo_ket_red	5.04
PF03793	PASTA	3.60
PF02720	DUF222	2.16
PF01548	DEDD_Tnp_IS110	2.16
PF13359	DDE_Tnp_4	1.44
PF00732	GMC_oxred_N	1.44
PF02371	Transposase_20	1.44
PF07479	NAD_Gly3P_dh_C	1.44
PF10518	TAT_signal	1.44
PF04149	DUF397	0.72
PF13561	adh_short_C2	0.72
PF13847	Methyltransf_31	0.72
PF12802	MarR_2	0.72
PF14062	DUF4253	0.72
PF14832	Tautomerase_3	0.72
PF00440	TetR_N	0.72
PF02156	Glyco_hydro_26	0.72
PF01243	Putative_PNPOx	0.72
PF08327	AHSA1	0.72
PF03992	ABM	0.72
PF13581	HATPase_c_2	0.72
PF03239	FTR1	0.72
PF02782	FGGY_C	0.72
PF00313	CSD	0.72
PF01895	PhoU	0.72
PF13641	Glyco_tranf_2_3	0.72
PF00296	Bac_luciferase	0.72
PF04250	DUF429	0.72
PF11716	MDMPI_N	0.72
PF12840	HTH_20	0.72
PF08044	DUF1707	0.72
PF08386	Abhydrolase_4	0.72
PF02861	Clp_N	0.72
PF00171	Aldedh	0.72
PF01182	Glucosamine_iso	0.72
PF10604	Polyketide_cyc2	0.72
PF00326	Peptidase_S9	0.72
PF00561	Abhydrolase_1	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	9.35
COG3547	Transposase	Mobilome: prophages, transposons [X]	3.60
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	1.44
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	1.44
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.72
COG0363	6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase	Carbohydrate transport and metabolism [G]	0.72
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.72
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.72
COG2410	Predicted nuclease (RNAse H fold)	General function prediction only [R]	0.72
COG4124	Beta-mannanase	Carbohydrate transport and metabolism [G]	0.72
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.72

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.36 %
Unclassified	root	N/A	49.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.36 %
Unclassified	root	N/A	49.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.36 %
Unclassified	root	N/A	49.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	42.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	38.13 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	33.09 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1.44 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	6.47 %
Glycomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales	1.44 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.44 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.44 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.72 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.72 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.72 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.72 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.72 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	3.60 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.16 %
Glycomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae	1.44 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	1.44 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.44 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.72 %
unclassified Streptosporangiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Capillimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae	0.72 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.72 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.72 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	3.60 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.16 %
Ruminococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus	1.44 %
Glycomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae	1.44 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.44 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.72 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.72 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.72 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.72 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.72 %
Capillimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	3.60 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.16 %
Ruminococcus albus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus → Ruminococcus albus	1.44 %
Glycomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae	1.44 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.44 %
Candidatus Frankia datiscae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia datiscae	0.72 %
Nocardioides panacis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides panacis	0.72 %
Capillimicrobium parvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	0.72 %
Micromonospora auratinigra	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora auratinigra	0.72 %
Pseudonocardia autotrophica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia autotrophica	0.72 %
Streptosporangiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111022\|2221191696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	849	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105770084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3224	Open in IMG/M
3300004479\|Ga0062595_101533738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	617	Open in IMG/M
3300005338\|Ga0068868_100410427	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300005341\|Ga0070691_10072891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1668	Open in IMG/M
3300005434\|Ga0070709_10756927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	759	Open in IMG/M
3300005435\|Ga0070714_101530938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus → Ruminococcus albus	651	Open in IMG/M
3300005436\|Ga0070713_100364291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1344	Open in IMG/M
3300005467\|Ga0070706_102109106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Candidatus Frankia datiscae	510	Open in IMG/M
3300005518\|Ga0070699_101028222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	756	Open in IMG/M
3300005535\|Ga0070684_100735538	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300005556\|Ga0066707_10737127	Not Available	614	Open in IMG/M
3300005764\|Ga0066903_104430919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia autotrophica	750	Open in IMG/M
3300005841\|Ga0068863_100590709	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300005905\|Ga0075269_10120578	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300006059\|Ga0075017_101038005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	639	Open in IMG/M
3300006175\|Ga0070712_100925182	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300006791\|Ga0066653_10350674	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300006804\|Ga0079221_10325506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	915	Open in IMG/M
3300006804\|Ga0079221_10742304	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300006806\|Ga0079220_10426878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	877	Open in IMG/M
3300006854\|Ga0075425_102606038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → Ruminococcus → Ruminococcus albus	559	Open in IMG/M
3300009012\|Ga0066710_102317080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	780	Open in IMG/M
3300009545\|Ga0105237_10624150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1085	Open in IMG/M
3300009792\|Ga0126374_10497455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	878	Open in IMG/M
3300010043\|Ga0126380_10500276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → unclassified Streptosporangiales → Streptosporangiales bacterium	932	Open in IMG/M
3300010046\|Ga0126384_10621832	Not Available	948	Open in IMG/M
3300010047\|Ga0126382_11363959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	645	Open in IMG/M
3300010048\|Ga0126373_10871990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora auratinigra	964	Open in IMG/M
3300010320\|Ga0134109_10261882	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300010329\|Ga0134111_10444556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	561	Open in IMG/M
3300010360\|Ga0126372_11902878	Not Available	640	Open in IMG/M
3300010362\|Ga0126377_13194196	Not Available	529	Open in IMG/M
3300010366\|Ga0126379_10863774	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300010376\|Ga0126381_103075994	Not Available	661	Open in IMG/M
3300010376\|Ga0126381_104411702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	544	Open in IMG/M
3300012200\|Ga0137382_10609182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	780	Open in IMG/M
3300012201\|Ga0137365_10006430	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9391	Open in IMG/M
3300012206\|Ga0137380_10868211	Not Available	776	Open in IMG/M
3300012210\|Ga0137378_10173308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae	2004	Open in IMG/M
3300012210\|Ga0137378_10878310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	809	Open in IMG/M
3300012351\|Ga0137386_10407835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	979	Open in IMG/M
3300012354\|Ga0137366_10185763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Glycomycetales → Glycomycetaceae	1557	Open in IMG/M
3300012354\|Ga0137366_10846289	Not Available	648	Open in IMG/M
3300012363\|Ga0137390_10560453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1113	Open in IMG/M
3300012509\|Ga0157334_1060021	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300012960\|Ga0164301_10153752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1411	Open in IMG/M
3300012961\|Ga0164302_10131800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1441	Open in IMG/M
3300012971\|Ga0126369_12123391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	649	Open in IMG/M
3300013105\|Ga0157369_10285294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1719	Open in IMG/M
3300015372\|Ga0132256_102860413	Not Available	580	Open in IMG/M
3300015372\|Ga0132256_102961926	Not Available	571	Open in IMG/M
3300016341\|Ga0182035_10083065	Not Available	2293	Open in IMG/M
3300016387\|Ga0182040_10572844	All Organisms → cellular organisms → Bacteria → Terrabacteria group	911	Open in IMG/M
3300016445\|Ga0182038_12136872	Not Available	508	Open in IMG/M
3300017959\|Ga0187779_10236578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1153	Open in IMG/M
3300017973\|Ga0187780_10367724	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300018064\|Ga0187773_11042872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300021559\|Ga0210409_10398812	Not Available	1231	Open in IMG/M
3300021560\|Ga0126371_10477597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1394	Open in IMG/M
3300021560\|Ga0126371_11003221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	976	Open in IMG/M
3300021560\|Ga0126371_11966577	Not Available	703	Open in IMG/M
3300021560\|Ga0126371_12586794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	615	Open in IMG/M
3300024254\|Ga0247661_1015246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1317	Open in IMG/M
3300025898\|Ga0207692_10367342	Not Available	890	Open in IMG/M
3300025915\|Ga0207693_10158349	Not Available	1781	Open in IMG/M
3300025917\|Ga0207660_10227923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1464	Open in IMG/M
3300025939\|Ga0207665_10966072	Not Available	677	Open in IMG/M
3300026023\|Ga0207677_11042048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	743	Open in IMG/M
3300026041\|Ga0207639_10253931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1534	Open in IMG/M
3300027765\|Ga0209073_10187217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides panacis	781	Open in IMG/M
3300027787\|Ga0209074_10220181	Not Available	723	Open in IMG/M
3300028379\|Ga0268266_11273435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	710	Open in IMG/M
3300031543\|Ga0318516_10549286	Not Available	661	Open in IMG/M
3300031546\|Ga0318538_10178207	Not Available	1130	Open in IMG/M
3300031680\|Ga0318574_10929953	Not Available	509	Open in IMG/M
3300031681\|Ga0318572_10331664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	901	Open in IMG/M
3300031681\|Ga0318572_10412486	Not Available	803	Open in IMG/M
3300031748\|Ga0318492_10504558	All Organisms → cellular organisms → Bacteria → Terrabacteria group	642	Open in IMG/M
3300031778\|Ga0318498_10224739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	849	Open in IMG/M
3300031779\|Ga0318566_10077280	Not Available	1615	Open in IMG/M
3300031798\|Ga0318523_10404166	Not Available	678	Open in IMG/M
3300031799\|Ga0318565_10106656	Not Available	1346	Open in IMG/M
3300031910\|Ga0306923_11062603	All Organisms → cellular organisms → Bacteria → Terrabacteria group	875	Open in IMG/M
3300031954\|Ga0306926_12698084	Not Available	539	Open in IMG/M
3300032009\|Ga0318563_10270378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	919	Open in IMG/M
3300032009\|Ga0318563_10762627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	519	Open in IMG/M
3300032065\|Ga0318513_10361804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	707	Open in IMG/M
3300032065\|Ga0318513_10628673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	526	Open in IMG/M
3300032076\|Ga0306924_10217992	Not Available	2191	Open in IMG/M
3300032076\|Ga0306924_10285269	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1896	Open in IMG/M
3300032160\|Ga0311301_11373508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	884	Open in IMG/M
3300032205\|Ga0307472_100203710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1507	Open in IMG/M
3300032770\|Ga0335085_11405466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	731	Open in IMG/M
3300032805\|Ga0335078_11868600	Not Available	649	Open in IMG/M
3300032805\|Ga0335078_12118939	Not Available	596	Open in IMG/M
3300032828\|Ga0335080_10281479	Not Available	1811	Open in IMG/M
3300032828\|Ga0335080_10834299	Not Available	950	Open in IMG/M
3300032828\|Ga0335080_11553427	Not Available	653	Open in IMG/M
3300033134\|Ga0335073_11253518	Not Available	738	Open in IMG/M
3300033158\|Ga0335077_10228409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2074	Open in IMG/M
3300033158\|Ga0335077_11297381	Not Available	707	Open in IMG/M
3300034817\|Ga0373948_0100900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	680	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.93%
Host-Associated	Host-Associated	10.07%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.77%
Plants	Host-Associated → Plants	10.07%
Aquatic	Environmental → Aquatic	2.16%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.19%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.88%
Freshwater	Environmental → Aquatic → Freshwater	1.44%
Sediment	Environmental → Aquatic → Sediment	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.43%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	14.39%
Loam	Environmental → Terrestrial → Soil → Loam	12.95%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.44%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.06%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	14.39%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.23%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.32%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.72%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.83%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.39%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	9.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.32%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.16%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.44%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.44%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.44%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.44%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	1.44%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.44%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.72%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111022	Grass soil microbial communities from Rothamsted Park, UK - Chitin enrichment	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005899	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_302	Environmental	Open in IMG/M
3300005905	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_105	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2222008255	2209111022	Grass Soil	LPRPPPSFFGVGAIGLGVVLIFTDLLPWSGTGTGVGAAVGGLTVLLTMVYGVREMRNAKKAEESEDAE
INPhiseqgaiiFebDRAFT_1057700841	3300000364	Soil	SRIATAAAVLFGVGAIGLGGVLIFTDVLPLSGAGTGAGVALGGLTVLVTTAYGIREVRRAHRAAAADSEQQDDRSP*
Ga0062595_1015337381	3300004479	Soil	AADKAAASRVATASAVLFGMGAIGLGAVLIFTDLLPLSGIATGASVALGGLTVLATTGYSLREMRRAEKAERNQAHPGESG*
Ga0068868_1004104272	3300005338	Miscanthus Rhizosphere	ATASAVLFGIGAIGLGVVLIFTDLLPLSGVGAAVGGLTVLLTVAYGVREMRNAKQAEESEDAE*
Ga0070691_100728913	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	AVLFGIGAIGLGVVLIFTDLLPLSGVGTGVGAAVGGLTVLLTVAYGVREMRNAKKAEESEDAE*
Ga0070709_104907343	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	IGAIGLGAVLVFTDLLPLSGIATGASVALGGLTVLATTAYSVREMRRAQKAESDQAG*
Ga0070709_107569271	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RVATASAVLFGIGAIGLGAVLVFTDLLPLSGIATGASVALGGLTVLATTAYSVREMRRARKAESDQAG*
Ga0070714_1015309381	3300005435	Agricultural Soil	ASRVATASAVLFGVGAIGLGVVLIFTDLLPLSGTGTGVGAAVGGLTVLLTTAYGIREMRNAKKAEESEDAE*
Ga0070714_1022658173	3300005435	Agricultural Soil	LFGIGAIGLGAVLVFTDLLPLSGIATGASVALGGLTVLATTAYSVREMRRAQKAESDQAG
Ga0070713_1003642911	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	RVATASAVLFGMGAIGLGAVLIFTDLLPLSGVATGVSVALGGVTVLATTAYSLREMRRAQKADQNQGWSGENG*
Ga0070706_1021091061	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	ALKAAASRVATASAVLFGVGAIGLGVVLIFTNLLPLSGTGTGVGAAVGGLTVLLTVAYGVREMRNAKQAEENEDAE*
Ga0070699_1010282222	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	ARSAAEKTATNRIATATAVLFGLASIGLGGVLIFTDVLPLSGAGTGAGVALGGLTVLVTTLYGLREVRQAERATSAARDQPPAHR*
Ga0070684_1007355382	3300005535	Corn Rhizosphere	VATASAVLFGIGAIGLGVVLIFTDLLPLSGVGAAVGGLTVLLTVAYGVREMRNAKQAEESEDAE*
Ga0066707_107371271	3300005556	Soil	VLFGVGAIGLGVVLIFTDLLPLSGAGTGVGAAVGGLTVLLTTAYGIREMRNAEKAEESEDGE*
Ga0066903_1044309192	3300005764	Tropical Forest Soil	AAASRVATASAVLFGVGAIGLGVVLVFTDLLPLSGAGTGVGIAIGGVTVLVTMAYGIRELRRTEMAGGNEDAENEDADRGQ*
Ga0068863_1005907091	3300005841	Switchgrass Rhizosphere	ALKAAASRVATASAVLFGIGAIGLGVVLIFTDLLPLSGVGAAVGGLTVLLTVAYGVREMRNAKQAEESEDAE*
Ga0075271_100985091	3300005899	Rice Paddy Soil	VLFGVAAIGLGGVLIFTDLLPLSGVGTGASVTVGGLTVLVTMAYSIRELRRVRRAASTEQPAERQ*
Ga0075269_101205782	3300005905	Rice Paddy Soil	QARSAADRAAASRIGTASTVLFGVAAIGLGGVLIFTDLLPLSGVGTGASVTVGGLTVLATMAYSIRELRRVRRAASTEQPAERQ*
Ga0070717_117085253	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	SAVLFGIGAIGLGAVLVFTDLLPLSGIATGASVALGGLTVLATTAYSVREMRRAQKAESDQAG*
Ga0075017_1010380053	3300006059	Watersheds	AVLFGVGAIGLGAVLIFTDVLPLSGAGTGAGVAVAGLTVLVTIAYSVRELRQAEKADKNEG*
Ga0070712_1009251822	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ARSAALKAAASRVATASAVLFGVGAIGLGVVLIFTDLLPLSGAGTGVGAAVGGLTVLLTTAYGIREMRKAEKAEKAEESEDAE*
Ga0074060_120407112	3300006604	Soil	AIGLGAVLIFTDLLPLSGVWTGASVALGGLTVLATTAYSVREMRRAQKADREAADRA*
Ga0066653_103506741	3300006791	Soil	DKAAASRVATASAVLFGIGAIGLGAVLIFTDLLPLSGAWTGASVALGGLTVLATTAYSVREMRRAQRADREAADRA*
Ga0079221_103255062	3300006804	Agricultural Soil	AEKAAASRVATASAVLFGMGAIGLGAVLIFTDLLPLSGVATGVSVALGGVTVLATTAYSLREMRRAQKADQNQRWSGENG*
Ga0079221_107423042	3300006804	Agricultural Soil	ALKAAASRVATASAVLFGIGAIGLGVVLIFTDLLPLSGVGTGVGAAVGGLTVLLTVAYGVREMRNAKKAEESEDTE*
Ga0079220_104268782	3300006806	Agricultural Soil	VCWASAVLFGIGAIGLGVVLICTDLLPLSGVGTGVGAAVGGLTVLLTVAYGVREMR
Ga0079220_113399602	3300006806	Agricultural Soil	AVLFGIGAIGLGAVLVFTDLLPLSGIATGASVALGGLTVLATTAYSVREMRRAQKAESDQAG*
Ga0075425_1026060381	3300006854	Populus Rhizosphere	LKAAASRVATASAVLFGIGAIGLGVVLICTDLLPLSGVGTGVGAAVGGLTVLLTVAYGVREMRNAEKAEESEDAE*
Ga0066710_1023170801	3300009012	Grasslands Soil	SRVATASAVLFGVGAIGLGAVLIFTDVLPLSGVWTGASVALGGLTVLATTGYSVREMRRAQKADQAWGEAADQA
Ga0105237_106241502	3300009545	Corn Rhizosphere	ATASAVLFGIGAIGLGVVLIFTDLLPLSGVGTGAGAAVGGLTVLLTVAYGVREMRKAKQAEESEDAE*
Ga0126374_104974551	3300009792	Tropical Forest Soil	SRVATASAVLFGMGAIGLGAVLIFTDLLPLSGIATGVSVAVGGLTVLATTAYSVREMRRAQKADSEQMGSG*
Ga0126380_101118691	3300010043	Tropical Forest Soil	LFGMGAIGLGAVLIFTDLLPLSGIATGASVALGGLTVLATTAYSLREMRRAQKADQDQGWSGENG*
Ga0126380_105002761	3300010043	Tropical Forest Soil	AADKAAASRVATACAVLFGMGAIGLGAVLIFTKLLPLSGIATGASIALGGLTVLATTAYSVREMRRAEKAQSDQMDSG*
Ga0126384_103432281	3300010046	Tropical Forest Soil	VLFGIGAIGLGAVLIFTNVLPLSGVATGASVALAGLTVLATTAYSVREMRRAQKAESDQAG*
Ga0126384_106218322	3300010046	Tropical Forest Soil	VRRRLGVTLALARSAAEQMATSRIRTASAVLFGVGAIGLGAVLIFTDLLPLSGIATGASVALGGLTVLATTAYSLREMRRAQKADQDQGWSGENG*
Ga0126382_113639592	3300010047	Tropical Forest Soil	KTATSRIATAVAVLFGLGAIGLGGVLIFTDVLPLSGVGTGVGIALGGLTVLVTTAYGFREVRRAERAAAADDVRDDDSRA*
Ga0126373_108719903	3300010048	Tropical Forest Soil	AAANRVATACTVLFGIGALGLGAVLICTDLLPFSGLGTGLSVAIGGLTVLATMAYSIRESRRTEQTEQDQDAE*
Ga0134109_102618822	3300010320	Grasslands Soil	VQERARSAALKAAASRVATASAVLFGIGAIGLGLVLIFTDLLPLSGVGTGVGAAVGGLTVLLTVAYGIREMRNAEKAEASEDAE*
Ga0134111_104445561	3300010329	Grasslands Soil	TASAVLFGVGAIGLGVVLLFTNLLPLSGTGTGVGAAVGGLTVLLTMAYGVREMRNAKRAEESEDAE*
Ga0126370_102301713	3300010358	Tropical Forest Soil	AIGLGAVLIFTDLLPLSGIATGASVALGGLTVLATTAYSLREMRRAQKADQDQGWSGENG
Ga0126372_108488772	3300010360	Tropical Forest Soil	LFGIGAIGLGAVLIFTDLLPLSGIATGASVAVGGLTVLATTAYSVREMRRAQKAESDPMDSG*
Ga0126372_119028782	3300010360	Tropical Forest Soil	ASRVATASAILFGVGAIGLGGVLIFTDLLPLSGVGTGVGVAIGGLTVLATMVYGIREMRRAEKVEENEDAE*
Ga0126377_131941961	3300010362	Tropical Forest Soil	SRIATASTVLFGLATIGLGGVLIFTDVLPLSGTGTGAGVALGGLTVLVTTAYGIREVRRAQRSAAAHSEQHDDSHG*
Ga0126379_108637742	3300010366	Tropical Forest Soil	AALKAAASRVATASAVLFGVAAIGLGVVLIFTDLLPLSGVGTGVGVAIGGVTVLVTMAYSVRELRRAEKTGENEDAE*
Ga0126381_1030759941	3300010376	Tropical Forest Soil	RRHLATVQQHARSAALKAAASRVATASAVLFGVGAIGLGVVLIFTDLLPLSGVGTGVGIAIGGLTVLVTMAYSVRELRRAEKTGENEDAG*
Ga0126381_1044117021	3300010376	Tropical Forest Soil	RSAADKAAASRVATASAVLFGIGAIGLGAVLIFTDLLPLSGIATGISVAVGGLTVLATTAYSVREMRRAQKAESEQMGSG*
Ga0134126_104392782	3300010396	Terrestrial Soil	VLFGIGAIGLGAVLVFTDLLPLSGIATGASVALGGLTVLATTAYSVREMRRAQKAESDQDG*
Ga0126383_106980172	3300010398	Tropical Forest Soil	VGAIGLGAVLIFTDVLPLSGAGAGVSVAIGGLTVLATIGYSVRELRRAGKADHGEAARQRGGA*
Ga0137382_106091822	3300012200	Vadose Zone Soil	AALKAAASRVGTASAVLFGVGAIGLGAVLIFTDLLPLSGAGTGVGAAVGGLTVLLTTAYGVREMRKAEKAEESEDAE*
Ga0137365_1000643013	3300012201	Vadose Zone Soil	VATASAVLFGVGAIGLGVVLIFTDLLPLSGVGTGVGAAVGGLTVLLTVVYGVREMRNAEKAEESEDAE*
Ga0137380_108682112	3300012206	Vadose Zone Soil	LFGVGAIGLGVVLIFTDLLPLSGVGTGVGAAVGGLTVLLTVVYGVREMRNAEKAEESEDAE*
Ga0137378_101733083	3300012210	Vadose Zone Soil	LPPYRNAPVSAALKAAASRVATASAVLFGVGAIGLGVVLIFTDLLPLSGVGTGVGAAVGGLTVLLTVVYGVREMRNAEKAEESEDAE*
Ga0137378_108783102	3300012210	Vadose Zone Soil	IGTASAVIFGLGAIGLGGVLIFTDLLPLSGVGPGVSVAVGGLTVLATTVYSIRELRRAESSDAE*
Ga0137386_104078351	3300012351	Vadose Zone Soil	LPPYRNAPVSAALKAAASRVATASAVLFGVGAIGLGVVLIFTDLLPLSGVGTGVGAAVGGLTVLLTVVYGVREMRNAEKAEESEDAG*
Ga0137366_101857631	3300012354	Vadose Zone Soil	VATASAVLFGVGAIGLGVVLIFTDLLPLSGAGTGVGAAVGGLTVLLTVVYGVREMRNAEKAEESEDAE
Ga0137366_108462891	3300012354	Vadose Zone Soil	AASRAATASAVLFGVGAIGLGVVLIFTNLLPLSGTGTGVGAAVGGLTVLLTMAYGVREMRNAKKAEESEDAE*
Ga0137390_105604531	3300012363	Vadose Zone Soil	VATASAILFGVGAIGLGGVLIFTDVLPLSGAGTGASVALGGLTVLITTAYSVRELRRAEKADEIERAKQAKAAEW*
Ga0157334_10600211	3300012509	Soil	TASAVLFGIGAIGLGVVLIFTDLLPLSGVGTGVGAAVGGLTVLLTVVYGVREMRNAEKAEESEDAE*
Ga0164301_101537523	3300012960	Soil	SAALKAAASRVATASAVLFGIGAIGLGVVLIFTDLLPLSGVGTGVGAAVAGLTVLLTVAYGVREMRNAKQAEESEDAA*
Ga0164302_101318003	3300012961	Soil	ALKAAASRVATASAVLFGIGAIGLGVVLIFTDLLPLSGVGTGVGAAVGGLTVLLTVAYGVREMRNAKQAEESEDAE*
Ga0126369_121233911	3300012971	Tropical Forest Soil	SAVLFGMGAIGLGAVLIFTDLLPLSGVATGASVALGGLTVLATTAYSLREMRRAQKADQDQGWSGENG*
Ga0157369_102852941	3300013105	Corn Rhizosphere	SAVLFGIGAIGLGVVLIFTDLLPLSGVGAAVGGLTVLLTVAYGVREMRNAKQAEESEDAE
Ga0157372_102624521	3300013307	Corn Rhizosphere	LFGIGAIGLGVVLIFTDLLPLSGVGAAVGGLTVLLTVAYGVREMRNAKQAEESEDAE*
Ga0132256_1028604132	3300015372	Arabidopsis Rhizosphere	VATASAVLFGIGAIGLGVVLTFTDLLPLSGVGAAVGGLTVLLTVAYGVREMRNAKKIEESKDAE*
Ga0132256_1029619261	3300015372	Arabidopsis Rhizosphere	KAAASRVATASAVLFGVAAIGLGVVLVFTDLLPLSGVGTGVGVAIGGLTVLVTMAYSIRELRRAEKTEENEDAE*
Ga0182041_119920752	3300016294	Soil	GLGAVLIFTDLLPLSCVATGASVALGGLTVLATTAYSVREMRRAQKADREAADREAADRA
Ga0182035_100830654	3300016341	Soil	ARSAAVKAAASRAATASTIIFGVGAIGLGVVLILTDLLPWSGTGTGAGVAVGGLTVLATLAYGIRESRRTEQSEQTAQSAQDEDAG
Ga0182040_105728444	3300016387	Soil	FGVGAIGLGVVLVCTDLLPWSGAATGAGVAVGGLTVLVTMAYGIRELRRAEKTAENEDAG
Ga0182038_121368722	3300016445	Soil	ASAVLFGVGAIGLGAVLVFTDVLPLSGTGTGVGAAVGGLTVLLTTAYGVREMRNAKKVEESEDPEGDQRALCRSAGG
Ga0187807_10521321	3300017926	Freshwater Sediment	GIGAVGLGAVLVCTDVLPFSGVGTGVGVAIGGLTVLATMAYSIREMRRTEKTEEDQEAG
Ga0187785_102071722	3300017947	Tropical Peatland	VLFGTGAIGLGAVLIFTDLLPLSGIATGASVALGGLTVLATTAYSVREMRRAEKAERDQAHSGESG
Ga0187779_102365781	3300017959	Tropical Peatland	AALKMAASRVATACAVLFGAGAVGLGAVLVLTGLLPFSGVTTGVSVAIGGLTVLVTVAYSVRELRRTEKTEQDEDAG
Ga0187780_103677241	3300017973	Tropical Peatland	SRVATASAVLFGIGAIGLGALLACTDLLPFSGVGTGVGAAVGGLTVLLTTAYGVRELRKAKKAEETGEPEEATEAG
Ga0187777_112647731	3300017974	Tropical Peatland	GVGAIGLGAMLVCTDLLPFSGVGTGVGAAIGGLTVLATMAYGIRELRRTEKTEGNEDAG
Ga0187773_110428721	3300018064	Tropical Peatland	RVATASAVLFGIGAIGLGAVLIFTDLLPLSGIATGASIALGGLTVLATTAYSVREMRRAQKADQNQGGSGENG
Ga0210409_103988121	3300021559	Soil	SRVATASAVLFGVGAIGLGVVLIFTDLLPLSGTGTGVGAAVGGLTVLLTTAYGIREMRNAKKAEESEDAE
Ga0126371_104775973	3300021560	Tropical Forest Soil	ARSAALKAAASRVATACTVLFGIGALGLSAVLMCTDLLPFSGVGTGLSVALGGVTVLATMAYSIRESRRTKETEQNQDAE
Ga0126371_110032211	3300021560	Tropical Forest Soil	DKAAASRVATASAVLFGMGAIGLGAVLIFTDLLPLSGIATGVSVAVGGLTVLATTAYSVREMRRAQKAESEQMGSG
Ga0126371_119665771	3300021560	Tropical Forest Soil	AASRVATASAVLFGVAAIGLGVVLIFTDLLPLSGAGTGVGVAVGGLTVLVTMAYSVRELRRADKTRGNEDAE
Ga0126371_125867942	3300021560	Tropical Forest Soil	SAVLFGIGAIGLGAVLIFTDLLPLSGVATGASVVLGGLTVLATTAYSVREMRRAQKADREAADPEAADRA
Ga0247661_10152461	3300024254	Soil	RVATASAVLFGIGAIGLGVVLIFTDLLPLSGVGTGVGAAVGGLTVLLTVAYGVREMRKAKQAEESEDAE
Ga0207692_103673421	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	RARSAALKAAASRVATASAVLFGVGAIGLGVVLIFTDLLPLSGTGTGVGAAVGGLTVLLTTAYGVREMRNAKKAEESEDTE
Ga0207685_107906963	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	IGAIGLGAVLVFTDLLPLSGIATGASVALGGLTVLATTAYSVREMRRAQKAESDQAG
Ga0207693_101583492	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	RARSAALKAAASRVGTASAVLFGVGAIGLGAVLIFTDLLPLSGAGTGVGAAVGGLTVLLTTAYGIREMRKAEKAEKAEESEDAE
Ga0207660_102279231	3300025917	Corn Rhizosphere	QERARSAALKAAASRVATASAVLFGIGAIGLGVVLIFTDLLPLSGVGTGVGAAVGGLTVLLTVAYGVREMRNAKQAEESEDAE
Ga0207700_101099781	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VGAIGLGVVLIFTELLPLSGTGTGVGAAVGGLTVLLTTAYGVREMRNAKKAEESEDAE
Ga0207665_109660721	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	FGVGAIGLGAVLIFTDLLPLSGTGTGVGAAIGGLTVLLTTAYGIREMRKAEKAEKAEKAEESEDAE
Ga0207679_112277112	3300025945	Corn Rhizosphere	LFCIGAIGLGVVLIFTDLLPLSGVGTGVGAAVGGLTVLLTVAYGVREMRNAKRAEESEDA
Ga0207677_110420482	3300026023	Miscanthus Rhizosphere	ATASAVLFGIGAIGLGVVLIFTDLLPLSGVGAAVGGLTVLLTVAYGVREMRNAKQAEESEDAE
Ga0207639_102539311	3300026041	Corn Rhizosphere	ERARSAALKAAASRVATASAVLFGIGAIGLGVVLIFTDLLPLSGVGTGVGAAVGGLTVLLTVVYGVREMRKAEKAEESEDAE
Ga0209073_101872171	3300027765	Agricultural Soil	VCWASAVLFGIGAIGLGVVLICTDLLPLSGVGTGVGAAVGGLTVLLTVAYGVREMRNAKAEESDRQA
Ga0209448_100482674	3300027783	Bog Forest Soil	VGALSLGAVLALTDLLPFSGIATGASVAIAGLTVLATMAYSVRELRRTEKTEENEDAE
Ga0209074_102201812	3300027787	Agricultural Soil	VLFGIGAIGLGVVLICTDLLPLSGVGTGVGAAVGGLTVLLTVAYGVREMRNAEKAEESEDAE
Ga0268266_112734351	3300028379	Switchgrass Rhizosphere	AALKAAASRVATASAVLFGIGAIGLGVVLIFTDLLPLSGVGTGVGAAVGGLTVLLTVAYGVREMRKAKQAEESEDAE
Ga0318516_105492862	3300031543	Soil	VATASAVLFGVGAIGLGGVLIFTDLLPLSGAGTGVGVAIGGLTVLATMVYGIREMRRGEKVEE
Ga0318538_101782071	3300031546	Soil	TASAVLFGVGAIGLGGVLIFTDLLPLSGVGTGVGVAIGGLTVLATMVYGIREMRRAEKVEENEDAE
Ga0318573_102052781	3300031564	Soil	AALPPPRPSLFGVGAIGLGVVLIFTDLLPLSGAGTGVGVAIGGLTVLVTMAYSVRELRRAEKTGENEDSG
Ga0318574_109299531	3300031680	Soil	VATASAVLFGVGAIGLGGVLIFTDLLPLSGAGTGVGVAIGGLTVLATMVYGIREMRRAEKVEENEDAE
Ga0318572_103316643	3300031681	Soil	VATASAVLFGVGAIGLGGVLIFTDLLPLSGAGTGVGVAIGGLTVLATMVYGIREMRRGEKVEENEDAE
Ga0318572_104124862	3300031681	Soil	AVLFGVAAIGLGAVLACTDLLPFSGVGTGVGAAIGGLTVLATTAYGIRELRRTEQTEGTDDAE
Ga0310686_1087053986	3300031708	Soil	FGVGAIGLGGVLLFTDLLPLSGVGTGVGVAVGGLTVLLTTAYGVRELRNAKKAEEDEDAG
Ga0318492_105045583	3300031748	Soil	AASRVATASAVLFGVGAIGLGVVLVCTDLLPWSGAATGAGVAVGGLTVLVTMAYGIRELRRAEKTAENEDAGQ
Ga0307477_104141571	3300031753	Hardwood Forest Soil	AACTVLFGVGALSLGAVLALTDLLPFSGIATGASVAVAGLTVLGTMAYSVRELRRTEKTEENEDAE
Ga0318498_100210091	3300031778	Soil	LFGLGAIGLGAVLIFTDVLPLSGAGTGAGVAAAGVTVLATVAYSVWELRRADKTDEDKGA
Ga0318498_102247393	3300031778	Soil	ATASAVLFGVGAIGLGAVLILTDLLPFSGVTTGVSVAIAGLTVLATVAYSVREMRRTEQAEETEEDEDAR
Ga0318566_100772802	3300031779	Soil	VATASAVLFGVGAIGLGGVLIFTDLLPLSGVGTGVGVAIGGLTVLATMVYGIREMRRAEKVEENEDAE
Ga0318508_11967042	3300031780	Soil	CAVLFGLGAIGLGAVLIFTDVLPLSGAGTGAGVAAAGVTVLATVAYSVWELRRADKTDEDKGAE
Ga0318552_100112747	3300031782	Soil	GAIGLGAVLILTDVLPLSGAGTGAGVAAAGVTVLATVAYSVWELRRADKTDEDKGAE
Ga0318523_104041661	3300031798	Soil	ALKAAASRVATASAVLFGVGAIGLGGVLIFTDLLPLSGVGTGVGVAIGGLTVLATMVYGIREMRRAEKVEENEDAE
Ga0318565_101066563	3300031799	Soil	VATASAVLFGVGAIGLGVVLVCTDLLPWSGAATGAGVAVGGLTVLVTMAYGIRELRRAEKTAENEDAGQ
Ga0318567_101504591	3300031821	Soil	GLGAVLIFTDLLPLSGVATGASVALGGLTVLATTAYSVREMRRAQEADREGADRKAADRA
Ga0318564_101071131	3300031831	Soil	LFGVGAIGLGGVLIFTDLLPLSGAGTGVGVAIGGLTVLATMVYGIREMRRAEKVEENEDA
Ga0306925_105484341	3300031890	Soil	LLLCRHAPVRRPSRQQQAALPPPRPSLFGVGAIGLGVVLIFTDLLPLSGAGTGVGVAIGGLTVLVTMAYSVRELRRAEKTGENEDSG
Ga0306923_110626033	3300031910	Soil	LKAAASRVATASAVLFGVGAIGLGVVLVCTDLLPWSGAATGAGVAVGGLTVLVTMAYGIRELRRAEKTAENEDAGQ
Ga0306923_122530181	3300031910	Soil	LLLCRHAPVRRPTRQQQAALPPPRPSLFGVGAIGLGVVLIFTDLLPLSGAGTGVGVAIGGLTVLVTMAYSVRELRRAEKTGENEDSG
Ga0306926_126980841	3300031954	Soil	PPPRPSLFGVGAIGLGVVLIFTDLLPLSGAGTGVGVAIGGLTVLVTMAYSVRELRRAEKTGENEDSG
Ga0318563_102703783	3300032009	Soil	AASRVATASAVLFGVGAIGLGAVLVLTDLLPFSGVTTGVSVAIAGLTVLATVAYSVREMRRTEQAEETEEDEDAR
Ga0318563_107626272	3300032009	Soil	VLFGAGAVGLGVVLIFTDLLPPSGAGTGVGVAIGGLTVLATMACSVRELRRAEKTGENEDAV
Ga0318513_103618042	3300032065	Soil	ASAVLFDIAAIGLGVVLICTDLLPFSGVGTGVGAAVGGLTVLVTMAYSVRELRRAEQTADSDDAEQDRVTPGSE
Ga0318513_106286732	3300032065	Soil	NRTAEAVLFGIGAIGLGAVLIFTDLLPLSGVWTGASVALGGLTVLATTAYSVREMRRAQRADRAWGEAADRA
Ga0306924_102179921	3300032076	Soil	ASRAATASTIIFGVGAIGLGVVLILTDLLPWSGTGTGAGVAVGGLTVLATLAYGIRESRRTEQSEQTAQSAQDEDAG
Ga0306924_102852694	3300032076	Soil	SAVLFGVGAIGLGVVLVCTDLLPWSGAATGAGVAVGGLTVLVTMAYGIRELRRAEKTAENEDAGQ
Ga0311301_113735081	3300032160	Peatlands Soil	SRVATACTVLFGLAAIGLGAVLIFTDVLPLSGAGTGASIAIGGLTVLATMAYSIRESRRAEKTGQDEGAE
Ga0307472_1002037101	3300032205	Hardwood Forest Soil	ASRVATASAVLFGIGAIGLGVVLIFTDLLPLSGVGTGVGAAVGGLTVLLTVAYGVREMRNAKQAEESEDAE
Ga0335085_114054662	3300032770	Soil	LKAAASRVATASAVLFGIGAIGLGLVLVFTDLLPLSGAGTGAGVAAGGLTVLATMAYGIRELRRTEKTGESEDTG
Ga0335078_118686002	3300032805	Soil	ERARSAALKAAASRVATASAVLFGIGAIGLGAVLIFTDFLPFSGVGTGVGVAIGGLTVLLTMVYSIREMRNAKQAEEGAEGADAEEGEEAG
Ga0335078_118997201	3300032805	Soil	LFGIGAIGLGAVLIFTDLLPLSGIATGASVALGGLTVLATTGYSVREMRRAQKAESDQPG
Ga0335078_121189392	3300032805	Soil	SAALKAAASRVATASAVLFGVGAIGLGVVLVFTDLLPLSGVGTGVGVAIGGLTVLVTMAYSIRELRRAEKTEENEDAE
Ga0335080_102814792	3300032828	Soil	AALKAAASRVATASAVLFGVGAIGLGVVLMFTDLLPLSGTGTGVGAAVGGLTVLLTMVYGVREMRKAEKAEDAEKAEDAE
Ga0335080_108342991	3300032828	Soil	SAALKTAASRVATASAVLFGVGAVGLGAVLVLTDLLPFSGVTTGVSVAIGGLTVLVTVAYSVRELRRAEKTEQDEDAG
Ga0335080_113512681	3300032828	Soil	SAVLFGMGAIGLGAVLIFTDLLPLSGIATGASVALGGLTVLATTAYSVREMRRAQQAESDQAG
Ga0335080_115534271	3300032828	Soil	ERARSAAHKAAASRVATASAVLFGIGAIGLGAVLIFTDYLPFSGVGTGVGVAIGGLTVLLTMVYSVREMRNAKQAEESADAEEGEDAG
Ga0335080_117978641	3300032828	Soil	LFGIGAIGLGAVLIFTDLLPLSGIATGASVALGGLTVLATTAYSVREMRRAQRAESDQAG
Ga0335081_119772121	3300032892	Soil	SAVLFGIGAIGLGAVLIFTDLLPLSGIATGASVALGGLTVLATTAYSVREMRRAQKAESDQPG
Ga0335073_112535182	3300033134	Soil	RSAALKAAASRVATASAVLFGIGAIGLGVVLLFTDLLPLSGVGTGVGAAVGGLTVLLTVAYGIREMRRAEKAEESEDAE
Ga0335077_102284091	3300033158	Soil	EKAAASRVATASAVLFGIGAIGLGAVLIFTDLLPLSGIATGASVALGGLTVLATTAYSVREMRRAQRAGPDQTG
Ga0335077_112973812	3300033158	Soil	TASAVLFGIGAIGLGAVLIFTDFLPFSGVGTGVGVAIGGLTVLLTMVYSIREMRNAKQAEEGAEGADAEEGEEAG
Ga0373948_0100900_482_679	3300034817	Rhizosphere Soil	ASAVLFGIGAIGLGVVLIFTDLLPLSGVGTGVGAAVGGLTVLLTVAYGVREMRNAKKAEESEDAE
Ga0373948_0120448_438_611	3300034817	Rhizosphere Soil	MGAIGLGAVLIFTDLLPLSGIATGASIALGGLTVLATTAYSVREMRRARKAESDQAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055059

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences