Metagenome Family F055060

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055060
Family Type	Metagenome
Number of Sequences	139
Average Sequence Length	58 residues
Representative Sequence	VLTTKIRQPILHSITDIMAAAADVMDMDKAECSISRILPVRHPRCRENNNYAFE
Number of Associated Samples	110
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	29.71 %
% of genes near scaffold ends (potentially truncated)	26.62 %
% of genes from short scaffolds (< 2000 bps)	84.17 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (87.050 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (32.374 % of family members)
Environment Ontology (ENVO)	Unclassified (47.482 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.043 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 39.02% β-sheet: 0.00% Coil/Unstructured: 60.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF01964	ThiC_Rad_SAM	12.95
PF03473	MOSC	7.91
PF02452	PemK_toxin	4.32
PF03475	3-alpha	3.60
PF00854	PTR2	2.16
PF05988	DUF899	2.16
PF14534	DUF4440	2.16
PF01520	Amidase_3	0.72
PF08281	Sigma70_r4_2	0.72
PF08332	CaMKII_AD	0.72
PF07681	DoxX	0.72
PF00557	Peptidase_M24	0.72
PF00211	Guanylate_cyc	0.72
PF13377	Peripla_BP_3	0.72
PF00248	Aldo_ket_red	0.72
PF10049	DUF2283	0.72
PF01381	HTH_3	0.72
PF07719	TPR_2	0.72
PF12704	MacB_PCD	0.72
PF02687	FtsX	0.72
PF00009	GTP_EFTU	0.72
PF07927	HicA_toxin	0.72
PF12275	DUF3616	0.72
PF12833	HTH_18	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0422	4-amino-2-methyl-5-hydroxymethylpyrimidine (HMP) synthase ThiC	Coenzyme transport and metabolism [H]	12.95
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	4.32
COG2258	N-hydroxylaminopurine reductase YiiM, contains MOSC domain	Defense mechanisms [V]	3.60
COG3104	Dipeptide/tripeptide permease	Amino acid transport and metabolism [E]	2.16
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	2.16
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	0.72
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.72
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.72
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.72
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.72
COG4875	Protein kinase association domain CaMKII_AD, NTF2-like superfamily	Posttranslational modification, protein turnover, chaperones [O]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.05 %
Unclassified	root	N/A	12.95 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.05 %
Unclassified	root	N/A	12.95 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.05 %
Unclassified	root	N/A	12.95 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	59.71 %
Unclassified	root	N/A	12.95 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.44 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	59.71 %
Unclassified	root	N/A	12.95 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	19.42 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	19.42 %
Unclassified	root	N/A	12.95 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	2.88 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	19.42 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	18.71 %
Unclassified	root	N/A	12.95 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	2.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	19.42 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	18.71 %
Unclassified	root	N/A	12.95 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	2.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	19.42 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	17.99 %
Unclassified	root	N/A	12.95 %
unclassified Verrucomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae	2.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	19.42 %
unclassified Candidatus Udaeobacter	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter	17.27 %
Unclassified	root	N/A	12.95 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	2.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	19.42 %
Candidatus Udaeobacter sp.	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	17.27 %
Unclassified	root	N/A	12.95 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	2.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2065487018\|GPINP_F5MS3JC02HW4EV	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
2088090014\|GPIPI_17217817	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1526	Open in IMG/M
2166559005\|cont_contig39746	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	967	Open in IMG/M
3300000955\|JGI1027J12803_101738875	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	670	Open in IMG/M
3300002899\|JGIcombinedJ43975_10001573	All Organisms → cellular organisms → Bacteria	3530	Open in IMG/M
3300004156\|Ga0062589_100258900	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1311	Open in IMG/M
3300004479\|Ga0062595_100326815	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300005167\|Ga0066672_10007545	All Organisms → cellular organisms → Bacteria	4992	Open in IMG/M
3300005186\|Ga0066676_10326122	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300005355\|Ga0070671_101672203	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	565	Open in IMG/M
3300005435\|Ga0070714_100525665	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1130	Open in IMG/M
3300005436\|Ga0070713_101129540	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	758	Open in IMG/M
3300005439\|Ga0070711_100202714	Not Available	1532	Open in IMG/M
3300005445\|Ga0070708_100330739	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300005518\|Ga0070699_101048564	Not Available	748	Open in IMG/M
3300005536\|Ga0070697_100202235	All Organisms → cellular organisms → Bacteria	1688	Open in IMG/M
3300005536\|Ga0070697_101568092	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	589	Open in IMG/M
3300005554\|Ga0066661_10003095	All Organisms → cellular organisms → Bacteria	7303	Open in IMG/M
3300005568\|Ga0066703_10030661	All Organisms → cellular organisms → Bacteria	2888	Open in IMG/M
3300005764\|Ga0066903_100000582	All Organisms → cellular organisms → Bacteria	23568	Open in IMG/M
3300005764\|Ga0066903_100547472	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300005764\|Ga0066903_100930291	All Organisms → cellular organisms → Bacteria	1578	Open in IMG/M
3300005764\|Ga0066903_106225854	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300006028\|Ga0070717_11122363	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	716	Open in IMG/M
3300006175\|Ga0070712_100835398	Not Available	792	Open in IMG/M
3300006176\|Ga0070765_100030670	All Organisms → cellular organisms → Bacteria	4180	Open in IMG/M
3300009029\|Ga0066793_10071445	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1987	Open in IMG/M
3300009143\|Ga0099792_10866830	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300010159\|Ga0099796_10061765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1330	Open in IMG/M
3300010337\|Ga0134062_10697035	Not Available	533	Open in IMG/M
3300010360\|Ga0126372_12654721	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300010371\|Ga0134125_13100460	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	503	Open in IMG/M
3300010375\|Ga0105239_12590800	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	591	Open in IMG/M
3300010937\|Ga0137776_1633072	Not Available	623	Open in IMG/M
3300012198\|Ga0137364_10834941	Not Available	696	Open in IMG/M
3300012200\|Ga0137382_10379223	All Organisms → cellular organisms → Bacteria	994	Open in IMG/M
3300012200\|Ga0137382_10501708	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	862	Open in IMG/M
3300012202\|Ga0137363_10191954	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1633	Open in IMG/M
3300012202\|Ga0137363_10232077	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1493	Open in IMG/M
3300012203\|Ga0137399_10035440	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3489	Open in IMG/M
3300012203\|Ga0137399_10621368	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300012205\|Ga0137362_10386976	Not Available	1211	Open in IMG/M
3300012208\|Ga0137376_10496740	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300012208\|Ga0137376_10712798	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	865	Open in IMG/M
3300012208\|Ga0137376_10843946	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300012208\|Ga0137376_11734983	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	515	Open in IMG/M
3300012210\|Ga0137378_11246309	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	660	Open in IMG/M
3300012211\|Ga0137377_11797201	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300012285\|Ga0137370_10548655	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	711	Open in IMG/M
3300012349\|Ga0137387_10989636	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	604	Open in IMG/M
3300012357\|Ga0137384_10243381	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1501	Open in IMG/M
3300012361\|Ga0137360_10616808	Not Available	929	Open in IMG/M
3300012361\|Ga0137360_11646223	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	547	Open in IMG/M
3300012362\|Ga0137361_10056549	All Organisms → cellular organisms → Bacteria	3260	Open in IMG/M
3300012582\|Ga0137358_10069633	All Organisms → cellular organisms → Bacteria	2361	Open in IMG/M
3300012582\|Ga0137358_10187856	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1410	Open in IMG/M
3300012582\|Ga0137358_10409665	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	917	Open in IMG/M
3300012683\|Ga0137398_10456509	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	875	Open in IMG/M
3300012683\|Ga0137398_11139622	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	535	Open in IMG/M
3300012685\|Ga0137397_10400527	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1022	Open in IMG/M
3300012897\|Ga0157285_10275846	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	562	Open in IMG/M
3300012917\|Ga0137395_10035903	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3029	Open in IMG/M
3300012922\|Ga0137394_10048603	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	3496	Open in IMG/M
3300012923\|Ga0137359_10180393	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1885	Open in IMG/M
3300012923\|Ga0137359_11027518	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	707	Open in IMG/M
3300012924\|Ga0137413_10030388	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2959	Open in IMG/M
3300012924\|Ga0137413_10045351	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2516	Open in IMG/M
3300012925\|Ga0137419_10552886	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	920	Open in IMG/M
3300012929\|Ga0137404_10933955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	792	Open in IMG/M
3300012929\|Ga0137404_11642112	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	596	Open in IMG/M
3300012944\|Ga0137410_10826542	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	779	Open in IMG/M
3300012944\|Ga0137410_11751504	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	547	Open in IMG/M
3300012961\|Ga0164302_11103124	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300012971\|Ga0126369_10234646	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1794	Open in IMG/M
3300012984\|Ga0164309_10449289	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	974	Open in IMG/M
3300012984\|Ga0164309_11490642	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	578	Open in IMG/M
3300012987\|Ga0164307_10301324	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1143	Open in IMG/M
3300012989\|Ga0164305_10594703	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	888	Open in IMG/M
3300012989\|Ga0164305_11281657	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	639	Open in IMG/M
3300013296\|Ga0157374_12787919	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	516	Open in IMG/M
3300015241\|Ga0137418_10360180	All Organisms → cellular organisms → Bacteria	1198	Open in IMG/M
3300015245\|Ga0137409_10136666	All Organisms → cellular organisms → Bacteria	2251	Open in IMG/M
3300018054\|Ga0184621_10013970	All Organisms → cellular organisms → Bacteria	2371	Open in IMG/M
3300018468\|Ga0066662_12359589	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300019877\|Ga0193722_1025114	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1540	Open in IMG/M
3300019877\|Ga0193722_1052398	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1032	Open in IMG/M
3300019879\|Ga0193723_1049030	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300019885\|Ga0193747_1017521	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1753	Open in IMG/M
3300019885\|Ga0193747_1035073	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1248	Open in IMG/M
3300019886\|Ga0193727_1003429	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6604	Open in IMG/M
3300019887\|Ga0193729_1044715	Not Available	1818	Open in IMG/M
3300019888\|Ga0193751_1218630	Not Available	620	Open in IMG/M
3300019890\|Ga0193728_1287200	Not Available	634	Open in IMG/M
3300020010\|Ga0193749_1042174	Not Available	881	Open in IMG/M
3300020018\|Ga0193721_1086553	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	811	Open in IMG/M
3300020059\|Ga0193745_1022302	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1382	Open in IMG/M
3300020062\|Ga0193724_1043529	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	953	Open in IMG/M
3300020140\|Ga0179590_1049847	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1077	Open in IMG/M
3300021168\|Ga0210406_10162158	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1873	Open in IMG/M
3300021178\|Ga0210408_10313023	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1252	Open in IMG/M
3300021411\|Ga0193709_1027256	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1381	Open in IMG/M
3300021413\|Ga0193750_1064026	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	733	Open in IMG/M
3300021560\|Ga0126371_10357727	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300022534\|Ga0224452_1045638	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1294	Open in IMG/M
3300022756\|Ga0222622_10116199	Not Available	1673	Open in IMG/M
3300025898\|Ga0207692_10112539	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1512	Open in IMG/M
3300025898\|Ga0207692_10902240	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	581	Open in IMG/M
3300025912\|Ga0207707_11196384	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	615	Open in IMG/M
3300025915\|Ga0207693_10692884	Not Available	789	Open in IMG/M
3300025929\|Ga0207664_10598427	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	990	Open in IMG/M
3300025930\|Ga0207701_11192920	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	628	Open in IMG/M
3300026078\|Ga0207702_12194302	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300026309\|Ga0209055_1023696	Not Available	2907	Open in IMG/M
3300026317\|Ga0209154_1011858	Not Available	4253	Open in IMG/M
3300026508\|Ga0257161_1076170	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	690	Open in IMG/M
3300026555\|Ga0179593_1157498	All Organisms → cellular organisms → Bacteria	2786	Open in IMG/M
3300026557\|Ga0179587_10209706	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300027537\|Ga0209419_1032599	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	985	Open in IMG/M
3300027821\|Ga0209811_10090409	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1090	Open in IMG/M
3300027889\|Ga0209380_10380366	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300027903\|Ga0209488_10653056	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300028711\|Ga0307293_10073784	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300028807\|Ga0307305_10007053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4840	Open in IMG/M
3300028828\|Ga0307312_10782910	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	632	Open in IMG/M
3300028885\|Ga0307304_10191742	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300031057\|Ga0170834_105061823	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1007	Open in IMG/M
3300031122\|Ga0170822_12795822	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1261	Open in IMG/M
3300031231\|Ga0170824_112902404	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	509	Open in IMG/M
3300031231\|Ga0170824_120500571	All Organisms → cellular organisms → Bacteria	1396	Open in IMG/M
3300031231\|Ga0170824_122253834	Not Available	911	Open in IMG/M
3300031231\|Ga0170824_124731993	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	592	Open in IMG/M
3300031231\|Ga0170824_126854950	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1478	Open in IMG/M
3300031469\|Ga0170819_14103437	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	557	Open in IMG/M
3300032180\|Ga0307471_100002373	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	10816	Open in IMG/M
3300032180\|Ga0307471_100692224	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300032180\|Ga0307471_103838835	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300032205\|Ga0307472_101251696	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	712	Open in IMG/M
3300032261\|Ga0306920_103220863	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → unclassified Candidatus Udaeobacter → Candidatus Udaeobacter sp.	610	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.40%
Host-Associated	Host-Associated	2.88%
Engineered	Engineered	0.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.53%
Aquatic	Environmental → Aquatic	2.88%
Plants	Host-Associated → Plants	2.88%
Modeled	Engineered → Modeled	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.53%
Sediment	Environmental → Aquatic → Sediment	2.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.16%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	77.70%
Loam	Environmental → Terrestrial → Soil → Loam	15.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.44%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	56.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.07%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.16%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.44%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	32.37%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	5.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.16%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.44%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.72%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.72%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2065487018	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300020059	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021411	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2	Environmental	Open in IMG/M
3300021413	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPINP_02007710	2065487018	Soil	VRQLILHSITDIMAVAAADVMNMDKAECSISRILPVRHPRYRDNNTYAFA
GPIPI_00896520	2088090014	Soil	VCSSARPALTTKIRQTILRSITDIMVVAAADVTDMDKAECSINRILPVRHPRRRDSNNYAFE
cont_0746.00002940	2166559005	Simulated	VLTTEVRQAILHSISDIMAVTADVIDMDTAECSISRILPVRHPRYRDNNTYAFA
JGI1027J12803_1017388751	3300000955	Soil	VLTTKVRQTTLHSNTDIMAVVVAAADIMDMDKAECPISRILPVRHPRFRDNNNYAFEQISASIL*
JGIcombinedJ43975_100015736	3300002899	Soil	MPPTSIGSILHNITDIMVVGDVTDMDKAECSINRILAVRRLRCRENSNYAPE*
Ga0062589_1002589001	3300004156	Soil	VLTTRVRQAIHQSITDIMAVAAADVMDMDKAECSISRILPVRHPWYRDNNTYAFA*
Ga0062595_1003268152	3300004479	Soil	VLTTKVRQTIPHSITDIMAAAVVAADVMDMDKVGCSISRILPVRHPPCREINNYAFE*
Ga0066672_100075459	3300005167	Soil	LAVRFSVLPVLTTKIRQTTLHSITDIMAAAADVMDTDKAECSISRILPVRHPRCRENNNYAFE*
Ga0066676_103261221	3300005186	Soil	VPTTKVRRRILHSITDIMAAAAAGVMDMDKAEYSISRILPVRHPECRESNIYAFE*
Ga0070671_1016722031	3300005355	Switchgrass Rhizosphere	LAVLSRALRVLTTEVRQAILHSISDIMAVAAADVMDMDKAVCSISRILPVRHPWYPDNNTYAFA*
Ga0070714_1005256652	3300005435	Agricultural Soil	VYSHLAVRSSALPVLTTKVRQTILHSITDIMAAAVAADVMDMDKAECSISRILPVPHPRCQDNNNYAFE*
Ga0070713_1011295402	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VLTTKVRQTILHSITDIMAAAVAADITDMDKAECSISRIFPVRHPRCQDNNNYAFE*
Ga0070711_1002027141	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	SALPVLTTKVRQTILHRITDIMAAAVAADVMDMDKAERSISRILPVRRPRCRDNNN*
Ga0070708_1003307393	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MIRQMILHSITDIMAAADAMGMDKAECPINRILPVRHLRRDSGNYAF*
Ga0070699_1010485642	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MIRRMILHSITDIMAAADVMGMDKAECPINRILPVRHLRRDSGNYAF*
Ga0070697_1002022352	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LALRSSALPVLTTKVRQTILHSITDIMAAAVAADVMDMDKAECSISRILPVPHPRCQDNNNYAFE*
Ga0070697_1015680921	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VLTTEVRLPILHSIIDIMAGAAADIMDMDKAECSISRILLVRHPRYRDNNTYGFA*
Ga0066661_100030952	3300005554	Soil	VLTTKIRQLILHSVTDIMAAAADVMDMDKAECSIGRILPVRHPRCRENNNYAFE*
Ga0066703_100306611	3300005568	Soil	CSGLAVRFSVLPVLTTKIRQTTLHSITDIMAAAADVMDTDKAECSISRILPVRHPRCRENNNYAFE*
Ga0066903_10000058219	3300005764	Tropical Forest Soil	LAVCSSALPALTTIRQTILRSITGITVVVVAADIMDMDKEECSISRILPVRHPRCRDSNNYAFA*
Ga0066903_1005474723	3300005764	Tropical Forest Soil	VHYLSPPALTTIRQTILQNITGIREAVVVDIMDMEKAECSINRILPVRDPRCRENKKYVFE*
Ga0066903_1009302912	3300005764	Tropical Forest Soil	MIRRTILHSITGIMAAGDIMNMDKEECLIDRILPVHNPQCRESNNYIFE*
Ga0066903_1062258541	3300005764	Tropical Forest Soil	VRCSALAVLTTTIRQTSLQSITDITVVGDVMAMDKAGCSINRILPVRHPRCWENSNYAFE
Ga0070717_111223632	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VLTTKVRQTILHSITDIMAAAVAADVMDMDKAECSISRILPVPHRRCQDNNNYAFE*
Ga0070712_1008353982	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTKIRQTILRSITDIMVVAAADVTDMDKAECSINRILPVRHPRRRDSNNYAFE*
Ga0070765_1000306702	3300006176	Soil	VRFSALPVLTTKVRQPILHSINDIMAAAVAAADATDMDKAECSISRILPVRHPRCQDNNNYAFE*
Ga0066793_100714451	3300009029	Prmafrost Soil	VLSSALLVLTTKVRQAILHSITDIMAAAAAADVMDMDKAERSISRILPVRRPRYRDNNNYAFE*
Ga0099792_108668301	3300009143	Vadose Zone Soil	VLTTEVRQLILHSITDIMAAAAAGVMDMDKAECSISRILPVRHPECRESNSYAFE*
Ga0099796_100617652	3300010159	Vadose Zone Soil	VLTTKVRQPILHSITDIMAAAAADVMDMDKDKAERSISRILPVCHPRCRVNNKYAFE*
Ga0134062_106970352	3300010337	Grasslands Soil	LTTKIRQTTLHSITDIMAAAADVMDTDKAECSISRILPVRHPLCRESNNYAFE*
Ga0126372_126547211	3300010360	Tropical Forest Soil	VRSSALPALTTIRQTTLHSITGIMAAVLAAAEVMDMDKAECSISRILAVRHPRCRENSNS
Ga0134125_131004602	3300010371	Terrestrial Soil	VLTTEVRQAILHSISDIMAVAAADVMDMDKAVCSISRILPVRHPWYPDNNTYAFA*
Ga0105239_125908002	3300010375	Corn Rhizosphere	VQTTKVRQITLHSITDIMAAVVVADVMDMDKAECSISRILPVRHPRYRDN
Ga0137776_16330722	3300010937	Sediment	MMIRQTILHSITGIMAVVLVAAVEDTMGTDKEECSISRILPVRNPRCRESKS*
Ga0137364_108349412	3300012198	Vadose Zone Soil	LGVRSSALPVPTTKVRRRILHSITDIMAAAAAGVMDMDKVECSISRILPVRHPECRESNIYAFE*
Ga0137382_103792231	3300012200	Vadose Zone Soil	VRSSALPVLTTKIRQPILHSITDIVAAAADVMDMDKAECSISRILPVRHPRCREYNNYAFE*
Ga0137382_105017081	3300012200	Vadose Zone Soil	VLSSAFPVLTTKVRQTILHSITDIMAVVAAADVMDMDKAERSISRMLPVRHPRCRDNNNYAFE*
Ga0137363_101919542	3300012202	Vadose Zone Soil	VRSLALPVLTTKIRQPILHSITDIMAAVVVAADVMDMDKAECSISRILPVRHLRYRDNNNYAFE*
Ga0137363_102320772	3300012202	Vadose Zone Soil	VLTTKVRQPILHSITDIMAVVAAADVTDMDKAECSISRILPVRHPRCRDNNSYAFE*
Ga0137399_100354404	3300012203	Vadose Zone Soil	VLTTEVRQAILHSISDIMAAAADVMDMDKAECSISRILPVRHPWYRDNNTYAFA*
Ga0137399_106213682	3300012203	Vadose Zone Soil	VRSLALPVLTTKIRQPILHSITDIMAAVAAADVMDMDKAECSISRILPVRHPRYRDNNNYAFE*
Ga0137362_103869762	3300012205	Vadose Zone Soil	VRSLALPVLTTKIRQPILHSITDIMAAVVAAADVMDMDKAECSISRILPVRHLRYRDNNNYAFE*
Ga0137376_104967402	3300012208	Vadose Zone Soil	VRSSALPVLTTKIRQPILHSITDIMAAAADVMDMDKAECSISRILPVRHPRCREFNNYAFE*
Ga0137376_107127982	3300012208	Vadose Zone Soil	VLTTKVRQPILHSITDIMAVVVADVMDMDKAERSISRMLPVRRHRCRDNNNYAFE*
Ga0137376_108439462	3300012208	Vadose Zone Soil	MTKIRQLILHSITDIMAAAADVMDMDKAECSISRILPVRHPRCREYNNYAFE*
Ga0137376_117349832	3300012208	Vadose Zone Soil	VLSSAFPVLTTKVRQTILHSITDIMAVVAAADVMDMDKAERSISRMLPVRHPRCRDNNNYAF*
Ga0137378_112463092	3300012210	Vadose Zone Soil	VLTTKVRQPILHSITDIMAVVAAADVTDMDKAECSISRILPVRHPRCRDNNNYAFE*
Ga0137377_117972012	3300012211	Vadose Zone Soil	LRSITDIMAVVAAADVMDMDKAERSISRMLPVRRHRCRDNNNYAFE*
Ga0137370_105486551	3300012285	Vadose Zone Soil	VRSSALPVLTTKIRQLNLHSITDIMAAAADVMDMDKAECSISRILPVRHPRCREYNNYAFE*
Ga0137387_109896361	3300012349	Vadose Zone Soil	LGVRSSALPAPTTKVRRPILHSITDIMAAAADVMDMDKAECSISRILPVRHPERRESNRYAFE*
Ga0137384_102433815	3300012357	Vadose Zone Soil	LGVRSSALPAPTTKVRRPILHSITDIMAAAVGVMDMDKAECSISRILPVRHPERRESNRYAFE*
Ga0137360_106168082	3300012361	Vadose Zone Soil	GVRSSALPVPTTKVPRAILHSISDIMAAAGVMDMDKAECSISRILPVRHPECRESNSYAFE*
Ga0137360_116462232	3300012361	Vadose Zone Soil	LTTKVRQPILHSITDIMAAVVAAADIMDMDKAECPISRILPVRHPRCRDNDNYTFE*
Ga0137361_100565492	3300012362	Vadose Zone Soil	VLTTKIRQPILHSITDIMAAVVVAADVMDMDKAECSISRILPVRHLRYRDNNNYAFE*
Ga0137358_100696331	3300012582	Vadose Zone Soil	VPTTKIHQTILHSITDIMAAAADVMDMDKAECSISRILPVRHPRCRDNNNYAFE*
Ga0137358_101878562	3300012582	Vadose Zone Soil	VLTTKVRQPILHSITDIMAAAAADVMDMDKDKAERSISRILPVCHPRCRVNNKSACE*
Ga0137358_104096653	3300012582	Vadose Zone Soil	VLTTEVRQLILHSITDIMAVAAAEEEVMDMDTAECSISRILPVRHPRYPDNNTYAFA*
Ga0137398_104565092	3300012683	Vadose Zone Soil	LALRFSARPVLTRKVRQPILHSITDIMAAAADVMDKDKAERSISRILPVCHPRCRVNNKYAFE*
Ga0137398_111396222	3300012683	Vadose Zone Soil	LGVRSSALPVPTTKVRRPILHSITDIMAAAAGVMDMDKAECSISRILPVRHPECRESNSYAFE*
Ga0137397_104005272	3300012685	Vadose Zone Soil	VLTTKVRQPILHSITDIMAAVAADVMDMDKAECSISRILPVRRPRCRESNTYAFA*
Ga0157285_102758461	3300012897	Soil	VLTTRVRQAIHQSITDIMAVAAADVMDMDKAECSISRILPVRHPRYRDNNTYAFA*
Ga0137395_100359032	3300012917	Vadose Zone Soil	VLTTKVRQPILHSITDIMAAVVAAADIMDMDKAECPISRILPVRHPRCRDNDNYTFE*
Ga0137394_100486035	3300012922	Vadose Zone Soil	VLTTEVRQPILHSITDIMAAVAADVMDMDKAECSINRILPVRHPRYRDNNTYAFA*
Ga0137359_101803934	3300012923	Vadose Zone Soil	VLTTKVRQPILHSITDIMAVVVAADVTDMDKAECSISRILPVRHPRCRDNNSYAFE*
Ga0137359_110275181	3300012923	Vadose Zone Soil	VLTTKVRQPILHSITDIMAAVAAAADIMDMDKAECPISRILPVRHPRCRDNDNYTFE*
Ga0137413_100303882	3300012924	Vadose Zone Soil	LGVRSSALPVPTTKVRRPILHSITDIMAAAAAGVMDMDKAECSISRILPVRHPECRESNSYAFE*
Ga0137413_100453512	3300012924	Vadose Zone Soil	VLTTKVRQPILHSITDIMAAAADVMDMDKDKAERSISRILPVCHPRCRVNNKYAFE*
Ga0137419_105528862	3300012925	Vadose Zone Soil	VPTTKVRRPILHSITDIMAAGAAGVMDMDKAECSISRILPARHPECRESNRYAFE*
Ga0137404_109339551	3300012929	Vadose Zone Soil	TKVRQPILHSITDIMAVVAAADVTDMDKAECSISRILPVRHPRCRDNNNYAFE*
Ga0137404_116421121	3300012929	Vadose Zone Soil	VLTTKIRQLILHSVTDIMAAAADVMDMDKAQCSISRILPVRHPRCRENNNYAFE*
Ga0137410_108265421	3300012944	Vadose Zone Soil	VRSLALPVLTTKIRKPILHSITDIMVAAADVMDMDKAECSISRILPVRHPR
Ga0137410_117515042	3300012944	Vadose Zone Soil	MKVRRAILHSITDIMAAAAAGVMDMDKAECSISRILPVRHPECRESNRYAFE*
Ga0164302_111031242	3300012961	Soil	LALRFSARLVLTTKVHQTTLHNITDIMAAVAVDIMDMDKAERSISQILPVCHPRCQVNNKYAFE*
Ga0126369_102346462	3300012971	Tropical Forest Soil	VCSSALPALTTIRQTILRSITGITVVVVAADIMDMDKEECSISRILPVRHPRCRDSNNYAFA*
Ga0164309_104492892	3300012984	Soil	VLTTEVRQAILHSISDIMAVAAADVIDMDKAVCSISRILPVRHPWYPDNNTYAFA*
Ga0164309_114906421	3300012984	Soil	VRFSALLVLTTKVRQRTLHSIIDIMAVVAAAADIMDMDKAECPISRILPVRHPRCRDNNNYTFE*
Ga0164307_103013242	3300012987	Soil	VRFSALLVLTTKVRQTTLHSITDIMAVVVAAADIMDMDKAECPISRILPVRHPQCRDNNNYTFE*
Ga0164305_105947031	3300012989	Soil	LALRFSVLPVLTTKVRQTTLHSNTDIMAAVVAAADIMDMDKAECPISRILPVRHPR
Ga0164305_112816572	3300012989	Soil	VHFSALLVLTTKVRQTTLHSITDIMAVVAAADIMDMDKAECPISRILPVRHPQCRDNNNYTFE*
Ga0157374_127879191	3300013296	Miscanthus Rhizosphere	VRFSALLVLTTKVRQRTLHSIIDIMAVVAAAADIMDMDKAECPISRILPVRHPRCRDNNNYAFE*
Ga0137418_103601802	3300015241	Vadose Zone Soil	VLTTEVRQPILHSITDIMAVAAADVMDMDKAERSISRILPVRHPRYRDNNT
Ga0137409_101366662	3300015245	Vadose Zone Soil	VLTTKIRKPILHSITDIMVAAADVMDMDKAECSISRILPVRHPECRESNRYAFE*
Ga0184621_100139705	3300018054	Groundwater Sediment	VLTTKIRQPILHSITDIMAAAADVMDMDKAECSISRILPVRHPRCRENNNYAFE
Ga0066662_123595891	3300018468	Grasslands Soil	VRFSALPVLTTTVRQPILHSINDIMAAEVVVAAADVMDMDKAECSISRILPVRHLRYRDNNNYAFE
Ga0193722_10251142	3300019877	Soil	LALRFSARPVLTTKVRQTTLHSITDIMAAVAVDIMDMDKAERSISRILPVCHPRCRVNNNYAFE
Ga0193722_10523983	3300019877	Soil	KVRQLILHSINDIMAAAADVMDMDKAECSIRRILPVRHPPCRDNNNYAFE
Ga0193723_10490302	3300019879	Soil	VLTTKVRQTTLHSITDIMAAVAVDIMDMDKAERSISRILPVCHPRCRVNNNYAFE
Ga0193747_10175211	3300019885	Soil	TKVRQPILHSITDIMAAADVMDMDKAERSISRILPVRHPWCRESNNYAFE
Ga0193747_10350731	3300019885	Soil	VLTTEVRQPILHSITDIMAAVAADVMDMDKAGRSISRILPVRHPRYRDNNTYAFA
Ga0193727_10034293	3300019886	Soil	VLTTKVRQTTLHSITDIMAAVAVDIMDMDKAEHSISRILPVCHPRCRVNNNYAFE
Ga0193729_10447152	3300019887	Soil	LGVRSSALPAPTTKVRRPILHSITDIMAAAAVGVMDMDKAECSISRILPVRHPECQESNRYAFE
Ga0193751_12186301	3300019888	Soil	VRSSALHVLTTGIRQPILHSITAIMAAAAAADVMDMGKAECSTGRILPVRHPRCRESNNYAFE
Ga0193728_12872002	3300019890	Soil	LRALALPVLTTKVRQPILHSITDIMAAADVMDMDKAERSISRILPVRHPWCRESNNYAFE
Ga0193749_10421742	3300020010	Soil	VLTTGIRQPILHSITAIMAAAAAADVMDMGKAECSTGRILPVRHPRCRESNNYAFE
Ga0193721_10865531	3300020018	Soil	LAVRSSTLRVRTTMSRQTILHSSNTGIMAVAADVMDMDKAECSINRILPVRQPRCRDSSNYASLGLLIKIA
Ga0193745_10223022	3300020059	Soil	VLTTKVRQTTLHSITDIVAAVAVDIMDMDKDRAERSISRILLVCHPRCRVNNNYAFE
Ga0193724_10435292	3300020062	Soil	LALRFSARPVLTTKVRQTTLHSITDIMAAVAVDIMDMDKAEHSISRILPVCHPRCRVNNNYAFE
Ga0179590_10498472	3300020140	Vadose Zone Soil	VLTTEVRQLILHSITDIMPAAADVMDMDKAECSISRILPVRHPRYRDNNTYAFA
Ga0210404_108241102	3300021088	Soil	MWQTILHSITDIMALVVADVMDKDKAECPISRILTVRRPRCRDSSNYRASAR
Ga0210406_101621583	3300021168	Soil	VLTTEVRQAILHSISDIMVVVAPAADVPDMDKAEYSISRILPVRHPRCRDNNT
Ga0210408_103130232	3300021178	Soil	VLTTEVRQLILHSISDIMAVAAADVMDMDKAECSISRILPVRHPRYRDNNTYAFA
Ga0193709_10272562	3300021411	Soil	VLTTEVRQLILHSITDIMAAAADVMDMDKAECSISRILPVRHPRYRDNNTYAFA
Ga0193750_10640262	3300021413	Soil	VLTTKVRQPILHSNTAIMAAVVVVAAVVDVMDMDKAECSISRILPVRHPRCLDNNNYAFE
Ga0126371_103577271	3300021560	Tropical Forest Soil	MIRRTILHSITDIMAAGDITDMDKEECLIDRILPVHNPQCRESNNYIFE
Ga0224452_10456381	3300022534	Groundwater Sediment	MKAWLGLLRLGVRSSALPVLTTKIRQMILHSITDIMAAADVMDMDKAECSISRILPVRHPRCRENNNYDF
Ga0222622_101161991	3300022756	Groundwater Sediment	TTKVRQPILHSITDIMAAADVMDMDKAERSISRILPVRHPWCRESNNYAFE
Ga0207692_101125392	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	LALRFLALPVLTTKLRQTTHPSITDITAAVVLAAADIPDVDKAECSISRILPVRHPRSRDNNN
Ga0207692_109022401	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VRSSALPALTTKVRQTILHSITDIMAAAVAADVMDMDKAECSISRILPVPHPRCQDNNNYAFE
Ga0207707_111963842	3300025912	Corn Rhizosphere	VQTTKVRQITLHSITDIMAAVVVADVMDMDKAECSISRILPVRNP
Ga0207693_106928842	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VSSSARPALTTKIRQTILRSITDIMVVVGAADVTDMDKAECSINRILPVRHPRRRDSNNYAFE
Ga0207664_105984272	3300025929	Agricultural Soil	VLTTKIRQTILHSITDIMAAAVAADVMDMDKAECSISRILPVPHPRCQDNNNYAFE
Ga0207701_111929202	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VLTTEVRQAILHSISDIMAVAAADVMDMDKAVCSISRILPVRHPWYPDNNTYAFA
Ga0207702_121943021	3300026078	Corn Rhizosphere	CSRLAVLSRALRVLTTEVRQAILHSISDIMAVAAADVMDMDKAVCSISRILPVRHPWYPDNNTYAFA
Ga0209055_10236966	3300026309	Soil	VLTTKIRQLILHSVTDIMAAAADVMDMDKAECSIGRILPVRHPRCRENNNYAFE
Ga0209154_10118581	3300026317	Soil	QTTLHSITDIMAAAADVMDTDKAECSISRILPVRHPRCRENNNYAFE
Ga0257161_10761701	3300026508	Soil	LALRSSALPVLTTKVRQPILHSITDIMAAAVAADVMDMDKAECSISRILPVRHPRCRDNNNYAFE
Ga0179593_11574986	3300026555	Vadose Zone Soil	VLTTEVRQAILHSISDIMAVAAAAEEVMDMDTAECSISRILPVRHPRYPDNNTYAFA
Ga0179587_102097063	3300026557	Vadose Zone Soil	VLTTEVRQLILHSITDIMAAAADVMDMDKAECSISRILPVRHPECRESNSYAFE
Ga0209419_10325991	3300027537	Forest Soil	VRSLALPVLTTTIRQTILHSNTNTMAAADVTEMGKAEYSINRILPVRHPRSRESSSYAFE
Ga0209811_100904092	3300027821	Surface Soil	MRQTILHSITDIMAAAVAVDVMDKDKAECPISRILTVRRPRCRDSNNYK
Ga0209380_103803661	3300027889	Soil	MEVARFSALPVLTTKVRQPILHSINDIMGAVVVAAADATDMDKAECSIRRIRPVRHPRCQDNNNYAFE
Ga0209488_106530561	3300027903	Vadose Zone Soil	VLTTKVRQPILHSITDIMAAAAADVMDMDKDKAERSISRILPVCHPRCRVNNKYAFE
Ga0307293_100737842	3300028711	Soil	VRSLALPVLTTKIRQPILHSITDIKAAVAAADVMDMDKAECSISRILPVRHSRYRDNNNYAFE
Ga0307305_100070532	3300028807	Soil	VLTTKIRQPILHSITDIKAAVAAADVMDMDKAECSISRILPVRHSRYRDNNNYAFE
Ga0307312_107829102	3300028828	Soil	VLTTKIRQPILHSITDIMAAAADIMDMGKAECSIGRIPPVRHPRCRENNNYA
Ga0307304_101917421	3300028885	Soil	MAISDRLKSMRAWLGLSGLAARSSALPVLTTKMSQTILHSITDIMAAAVDVMDMGKDKDRAEDSINRILSVRRPR
Ga0170834_1050618232	3300031057	Forest Soil	VRFSALPVLTTKVRQPILHNINDIMAAVVAAAADVMDMDKAECSISRILPVRHPRCQDNNNYAFE
Ga0170822_127958221	3300031122	Forest Soil	VRFSALPVLTTKVRQPILHSINDIMAAVVAADVMDMDKAECSISRILPVRHPRCQDNNNYAFE
Ga0170824_1129024041	3300031231	Forest Soil	VLTTEVRQAILHSISDIMAVAAADVMDMDTAECSISRVLPVRHPRYRDNNTYA
Ga0170824_1205005712	3300031231	Forest Soil	VLTTEVLHLILHSITDIMVAAADVMDMDKAECSISRILPVRHPRYRDNNTEAFA
Ga0170824_1222538342	3300031231	Forest Soil	VLTIEVRQAILHSISDIMAVTADVIDMDTAECSISRILPVRHPRYRDNNTYAFA
Ga0170824_1247319932	3300031231	Forest Soil	LALRFSARPVLTTKVRQTTLHSITDIMAAVAVDIMGMDKAERSISRILPVCHPRYQVNKKYAFE
Ga0170824_1268549502	3300031231	Forest Soil	LALRSSALPALTTKVRQPILHSINDIMAAVAAAAADVMDMDKAECSISRILPVRHPRCQDNNNYAFE
Ga0170819_141034371	3300031469	Forest Soil	VLTTEVRQLILHSITDIMAVAVANVMDMDTAECSISRILPVRHPRYR
Ga0307471_10000237314	3300032180	Hardwood Forest Soil	ILHSMTDIMAAVVVVVAADVMDMDKAECSISRILPVRHPRCLDNNNYAFE
Ga0307471_1006922242	3300032180	Hardwood Forest Soil	VRYSALAALTTIRQTTLHSITDNMAAVLAAADVMDMDKAECSISRILAVRHPRCRENSNYALA
Ga0307471_1038388351	3300032180	Hardwood Forest Soil	SKVRPTTLHSITDIMAPAAVADVMDMDKAERSISRILPVRRPRCRDNNN
Ga0307472_1012516962	3300032205	Hardwood Forest Soil	VLTTKVRPPILHSINDIMAAVVAADVTDMDKAECSISRILPVRHPRYRDNNTYAFA
Ga0306920_1032208631	3300032261	Soil	VVRSSTLPALTTTISQTILHGISRIMLAVVARGVMDMDKGESSINRILPVRHPRCRESNNYAFA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F055060

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences