Metagenome Family F055231

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055231
Family Type	Metagenome
Number of Sequences	139
Average Sequence Length	76 residues
Representative Sequence	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKSEAKPKRNP
Number of Associated Samples	119
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	15.83 %
% of genes near scaffold ends (potentially truncated)	52.52 %
% of genes from short scaffolds (< 2000 bps)	84.17 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.281 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (15.108 % of family members)
Environment Ontology (ENVO)	Unclassified (33.813 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.676 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 16.46% β-sheet: 32.91% Coil/Unstructured: 50.63%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF04828	GFA	5.04
PF06844	DUF1244	3.60
PF02776	TPP_enzyme_N	1.44
PF01078	Mg_chelatase	1.44
PF00072	Response_reg	0.72
PF00239	Resolvase	0.72
PF03631	Virul_fac_BrkB	0.72
PF00884	Sulfatase	0.72
PF05239	PRC	0.72
PF11953	DUF3470	0.72
PF08002	DUF1697	0.72
PF00185	OTCace	0.72
PF03966	Trm112p	0.72
PF02602	HEM4	0.72
PF09361	Phasin_2	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG3791	Uncharacterized conserved protein	Function unknown [S]	5.04
COG3492	Uncharacterized conserved protein, DUF1244 family	Function unknown [S]	3.60
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.72
COG1587	Uroporphyrinogen-III synthase	Coenzyme transport and metabolism [H]	0.72
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.72
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.72
COG3797	Uncharacterized conserved protein, DUF1697 family	Function unknown [S]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	92.09 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	48.20 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	31.65 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	11.51 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	9.35 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.88 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	9.35 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8.63 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	2.88 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.72 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	9.35 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8.63 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2.88 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.72 %
Unclassified	root	N/A	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2038011000\|ACOD_FV90NF401AZYHW	All Organisms → cellular organisms → Bacteria → Proteobacteria	505	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10075595	All Organisms → cellular organisms → Bacteria → Proteobacteria	724	Open in IMG/M
3300000890\|JGI11643J12802_10761672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1545	Open in IMG/M
3300000890\|JGI11643J12802_11605774	All Organisms → cellular organisms → Bacteria → Proteobacteria	695	Open in IMG/M
3300002244\|JGI24742J22300_10129936	All Organisms → cellular organisms → Bacteria → Proteobacteria	501	Open in IMG/M
3300004114\|Ga0062593_100104019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2013	Open in IMG/M
3300004157\|Ga0062590_100540070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1006	Open in IMG/M
3300004157\|Ga0062590_101787285	All Organisms → cellular organisms → Bacteria → Proteobacteria	630	Open in IMG/M
3300004267\|Ga0066396_10074601	All Organisms → cellular organisms → Bacteria → Proteobacteria	588	Open in IMG/M
3300004463\|Ga0063356_103396070	All Organisms → cellular organisms → Bacteria → Proteobacteria	686	Open in IMG/M
3300004633\|Ga0066395_10158003	All Organisms → cellular organisms → Bacteria → Proteobacteria	1155	Open in IMG/M
3300005293\|Ga0065715_10610074	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300005328\|Ga0070676_10333007	All Organisms → cellular organisms → Bacteria → Proteobacteria	1039	Open in IMG/M
3300005329\|Ga0070683_100197906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1908	Open in IMG/M
3300005329\|Ga0070683_100351089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1405	Open in IMG/M
3300005332\|Ga0066388_104305327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	725	Open in IMG/M
3300005339\|Ga0070660_100058305	All Organisms → cellular organisms → Bacteria → Proteobacteria	2993	Open in IMG/M
3300005339\|Ga0070660_100220676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1541	Open in IMG/M
3300005340\|Ga0070689_100989841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	748	Open in IMG/M
3300005341\|Ga0070691_10048482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2021	Open in IMG/M
3300005364\|Ga0070673_100545894	All Organisms → cellular organisms → Bacteria → Proteobacteria	1052	Open in IMG/M
3300005366\|Ga0070659_100210973	All Organisms → cellular organisms → Bacteria → Proteobacteria	1600	Open in IMG/M
3300005366\|Ga0070659_100786716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	827	Open in IMG/M
3300005366\|Ga0070659_101068475	All Organisms → cellular organisms → Bacteria → Proteobacteria	710	Open in IMG/M
3300005434\|Ga0070709_10230750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1324	Open in IMG/M
3300005435\|Ga0070714_100353275	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1381	Open in IMG/M
3300005435\|Ga0070714_100847858	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	886	Open in IMG/M
3300005439\|Ga0070711_101652955	All Organisms → cellular organisms → Bacteria → Proteobacteria	561	Open in IMG/M
3300005445\|Ga0070708_102012890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	535	Open in IMG/M
3300005457\|Ga0070662_101638165	All Organisms → cellular organisms → Bacteria → Proteobacteria	555	Open in IMG/M
3300005459\|Ga0068867_100041900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3346	Open in IMG/M
3300005530\|Ga0070679_100312349	All Organisms → cellular organisms → Bacteria → Proteobacteria	1521	Open in IMG/M
3300005535\|Ga0070684_100267207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1565	Open in IMG/M
3300005535\|Ga0070684_101141327	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300005543\|Ga0070672_100238047	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1530	Open in IMG/M
3300005547\|Ga0070693_100140343	All Organisms → cellular organisms → Bacteria → Proteobacteria	1520	Open in IMG/M
3300005549\|Ga0070704_100098668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2195	Open in IMG/M
3300005563\|Ga0068855_100734936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1054	Open in IMG/M
3300005564\|Ga0070664_100468043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1159	Open in IMG/M
3300005614\|Ga0068856_100060290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3749	Open in IMG/M
3300005615\|Ga0070702_100017457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3701	Open in IMG/M
3300005719\|Ga0068861_100027548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4140	Open in IMG/M
3300005840\|Ga0068870_10142914	All Organisms → cellular organisms → Bacteria → Proteobacteria	1402	Open in IMG/M
3300006049\|Ga0075417_10045757	All Organisms → cellular organisms → Bacteria → Proteobacteria	1872	Open in IMG/M
3300006163\|Ga0070715_10556138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	666	Open in IMG/M
3300006755\|Ga0079222_10046600	All Organisms → cellular organisms → Bacteria → Proteobacteria	1984	Open in IMG/M
3300006804\|Ga0079221_11159643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	597	Open in IMG/M
3300006844\|Ga0075428_100339850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1612	Open in IMG/M
3300006854\|Ga0075425_101897609	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300006871\|Ga0075434_101339253	All Organisms → cellular organisms → Bacteria → Proteobacteria	726	Open in IMG/M
3300006903\|Ga0075426_10200364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1447	Open in IMG/M
3300009011\|Ga0105251_10315116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	710	Open in IMG/M
3300009094\|Ga0111539_11138785	All Organisms → cellular organisms → Bacteria → Proteobacteria	907	Open in IMG/M
3300009098\|Ga0105245_10767831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1000	Open in IMG/M
3300009100\|Ga0075418_10494580	All Organisms → cellular organisms → Bacteria → Proteobacteria	1312	Open in IMG/M
3300009101\|Ga0105247_10005829	Not Available	7700	Open in IMG/M
3300009147\|Ga0114129_11253104	All Organisms → cellular organisms → Bacteria → Proteobacteria	921	Open in IMG/M
3300009147\|Ga0114129_13093920	All Organisms → cellular organisms → Bacteria → Proteobacteria	544	Open in IMG/M
3300009177\|Ga0105248_10022497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6992	Open in IMG/M
3300009545\|Ga0105237_11903915	All Organisms → cellular organisms → Bacteria → Proteobacteria	603	Open in IMG/M
3300010046\|Ga0126384_10026929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3774	Open in IMG/M
3300010048\|Ga0126373_10328210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1535	Open in IMG/M
3300010366\|Ga0126379_10009208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6837	Open in IMG/M
3300010373\|Ga0134128_10065004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4195	Open in IMG/M
3300010375\|Ga0105239_13417621	All Organisms → cellular organisms → Bacteria → Proteobacteria	516	Open in IMG/M
3300010399\|Ga0134127_12017356	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	655	Open in IMG/M
3300010400\|Ga0134122_12062615	All Organisms → cellular organisms → Bacteria → Proteobacteria	610	Open in IMG/M
3300010401\|Ga0134121_10031799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4283	Open in IMG/M
3300010868\|Ga0124844_1308503	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300012882\|Ga0157304_1005332	All Organisms → cellular organisms → Bacteria → Proteobacteria	1276	Open in IMG/M
3300012893\|Ga0157284_10134623	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300012897\|Ga0157285_10137664	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300012905\|Ga0157296_10130137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	728	Open in IMG/M
3300012906\|Ga0157295_10017683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1380	Open in IMG/M
3300012912\|Ga0157306_10034694	All Organisms → cellular organisms → Bacteria → Proteobacteria	1179	Open in IMG/M
3300012914\|Ga0157297_10060634	All Organisms → cellular organisms → Bacteria → Proteobacteria	1024	Open in IMG/M
3300012915\|Ga0157302_10049049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1187	Open in IMG/M
3300012958\|Ga0164299_10146818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1300	Open in IMG/M
3300012971\|Ga0126369_10007563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8164	Open in IMG/M
3300012984\|Ga0164309_10372102	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300013296\|Ga0157374_10802277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	957	Open in IMG/M
3300014325\|Ga0163163_10023329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5870	Open in IMG/M
3300014325\|Ga0163163_10468773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1320	Open in IMG/M
3300014745\|Ga0157377_10135455	All Organisms → cellular organisms → Bacteria → Proteobacteria	1508	Open in IMG/M
3300014745\|Ga0157377_10192486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1290	Open in IMG/M
3300015077\|Ga0173483_10175936	All Organisms → cellular organisms → Bacteria → Proteobacteria	966	Open in IMG/M
3300015077\|Ga0173483_10200954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	918	Open in IMG/M
3300015201\|Ga0173478_10341420	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300015373\|Ga0132257_102357466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	690	Open in IMG/M
3300015374\|Ga0132255_104166946	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300016270\|Ga0182036_10451450	All Organisms → cellular organisms → Bacteria → Proteobacteria	1011	Open in IMG/M
3300017792\|Ga0163161_10310456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1244	Open in IMG/M
3300019361\|Ga0173482_10091220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1087	Open in IMG/M
3300019361\|Ga0173482_10127487	All Organisms → cellular organisms → Bacteria → Proteobacteria	962	Open in IMG/M
3300019361\|Ga0173482_10400222	All Organisms → cellular organisms → Bacteria → Proteobacteria	638	Open in IMG/M
3300019361\|Ga0173482_10642516	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300019362\|Ga0173479_10457398	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300023057\|Ga0247797_1043132	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300023064\|Ga0247801_1035971	All Organisms → cellular organisms → Bacteria → Proteobacteria	722	Open in IMG/M
3300023077\|Ga0247802_1006197	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300023077\|Ga0247802_1015331	All Organisms → cellular organisms → Bacteria → Proteobacteria	1043	Open in IMG/M
3300023261\|Ga0247796_1019058	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300025901\|Ga0207688_10655362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300025908\|Ga0207643_10797247	All Organisms → cellular organisms → Bacteria → Proteobacteria	612	Open in IMG/M
3300025917\|Ga0207660_10293915	All Organisms → cellular organisms → Bacteria → Proteobacteria	1292	Open in IMG/M
3300025925\|Ga0207650_11884130	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300025927\|Ga0207687_10074037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2440	Open in IMG/M
3300025929\|Ga0207664_10443939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1157	Open in IMG/M
3300025941\|Ga0207711_10360150	All Organisms → cellular organisms → Bacteria → Proteobacteria	1347	Open in IMG/M
3300025944\|Ga0207661_10990316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	774	Open in IMG/M
3300025960\|Ga0207651_10698607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	893	Open in IMG/M
3300025960\|Ga0207651_11027053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	737	Open in IMG/M
3300025961\|Ga0207712_10350853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1227	Open in IMG/M
3300025981\|Ga0207640_10127551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1834	Open in IMG/M
3300026035\|Ga0207703_10627266	All Organisms → cellular organisms → Bacteria → Proteobacteria	1018	Open in IMG/M
3300026118\|Ga0207675_100038635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4454	Open in IMG/M
3300026121\|Ga0207683_10168266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1984	Open in IMG/M
3300027717\|Ga0209998_10194607	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300027874\|Ga0209465_10047899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2041	Open in IMG/M
3300027909\|Ga0209382_10972030	All Organisms → cellular organisms → Bacteria → Proteobacteria	888	Open in IMG/M
3300028380\|Ga0268265_10817327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	910	Open in IMG/M
3300028380\|Ga0268265_12179694	All Organisms → cellular organisms → Bacteria → Proteobacteria	561	Open in IMG/M
3300031573\|Ga0310915_10645571	All Organisms → cellular organisms → Bacteria → Proteobacteria	749	Open in IMG/M
3300031716\|Ga0310813_10387834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1199	Open in IMG/M
3300031716\|Ga0310813_11931376	All Organisms → cellular organisms → Bacteria → Proteobacteria	556	Open in IMG/M
3300031744\|Ga0306918_11047040	All Organisms → cellular organisms → Bacteria → Proteobacteria	633	Open in IMG/M
3300031771\|Ga0318546_10439635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	913	Open in IMG/M
3300031847\|Ga0310907_10036024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1824	Open in IMG/M
3300031879\|Ga0306919_10103171	All Organisms → cellular organisms → Bacteria → Proteobacteria	2011	Open in IMG/M
3300031890\|Ga0306925_10902251	All Organisms → cellular organisms → Bacteria → Proteobacteria	909	Open in IMG/M
3300031908\|Ga0310900_10736056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	792	Open in IMG/M
3300031910\|Ga0306923_10214265	All Organisms → cellular organisms → Bacteria → Proteobacteria	2203	Open in IMG/M
3300031943\|Ga0310885_10541538	All Organisms → cellular organisms → Bacteria → Proteobacteria	639	Open in IMG/M
3300031946\|Ga0310910_11075428	All Organisms → cellular organisms → Bacteria → Proteobacteria	627	Open in IMG/M
3300032059\|Ga0318533_10518504	All Organisms → cellular organisms → Bacteria → Proteobacteria	874	Open in IMG/M
3300032075\|Ga0310890_10477424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	943	Open in IMG/M
3300032076\|Ga0306924_10072154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3855	Open in IMG/M
3300032076\|Ga0306924_11337179	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300033475\|Ga0310811_11405350	All Organisms → cellular organisms → Bacteria → Proteobacteria	536	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.27%
Host-Associated	Host-Associated	41.73%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.27%
Plants	Host-Associated → Plants	41.01%
Arthropoda	Host-Associated → Arthropoda	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.18%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.39%
Roots	Host-Associated → Plants → Roots	1.44%
Symbiotic Fungal Gardens And Galleries	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.01%
Loam	Environmental → Terrestrial → Soil → Loam	17.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.83%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.51%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.16%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.44%
Fungus Garden	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden	0.72%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.83%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.67%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.63%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.60%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.16%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.44%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.44%
Unclassified	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.11%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.04%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.04%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.16%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.16%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.44%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.44%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.72%
Fungus Garden	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Unclassified → Fungus Garden	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2038011000	Fungus garden microbial communities from Atta colombica in Panama - from dump top	Host-Associated	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ACODT_7924670	2038011000	Fungus Garden	LGALAATPAFANWWIVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCQSEAKPKRNP
AF_2010_repII_A001DRAFT_100755952	3300000793	Forest Soil	MHKRFSLLAASVILGFSAATPAFANWWIVRSSDETCLVVDIEPTGKEKGITKIGRDSYPTAEEAEADVKQLCKSEAKPKQNP*
JGI11643J12802_107616723	3300000890	Soil	MRGLLAITVVLSFSATTPAFANWWVVRSSDETCLVVDVEPTGKEKGITKIDKDSYPTAEQAEADVKRLCKSQAKPKRNP*
JGI11643J12802_116057742	3300000890	Soil	LAAAPAFANWWIVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKTEAKPKRNP*
JGI24742J22300_101299362	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	LGAQLKPALSLTMRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDVEPTGKEKGITKIDKDSYPTAEQAEADVKRLCKSQAKPKRNP*
Ga0062593_1001040194	3300004114	Soil	LGVSAATPAFANWWIVRSSDETCLVVDIEPTGREKNITKIGRDSYPTAEEAEADVKRLCKSEAKLKQNP*
Ga0062590_1005400702	3300004157	Soil	LLTILVLLGVSAATPAFANWWIVRSSDETCLVVDIEPTGREKNITKIGRDSYPTAEEAEADVKRLCKSEAKLKQNP*
Ga0062590_1017872852	3300004157	Soil	LGVLVATPAFANWWIVRSSDETCLVVGIEPTGKEKGITKIGKDSYPTAEQAEADVKRICKSEAKPKRNP*
Ga0066396_100746012	3300004267	Tropical Forest Soil	MHKRFSLLAASVILGFSAATPAFANWWIVRSSDETCLVVDIEPTGKEKGITKIGRDSYPTAEEAEADVKRLCKSEAKPKQNP*
Ga0063356_1033960701	3300004463	Arabidopsis Thaliana Rhizosphere	PAFANWWIVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADIKRLCKSEAKPK*
Ga0066395_101580032	3300004633	Tropical Forest Soil	MRTRLHKRFSLLAASVILGFSAATPAFANWWIVRSSDETCLVVDIEPTGKEKGITKIGRDSYPTAEEAEADVKRLCKSEAKPKQNP*
Ga0065715_106100741	3300005293	Miscanthus Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADV
Ga0070676_103330071	3300005328	Miscanthus Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCIVVDIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKSQAKPKRNP*
Ga0070683_1001979064	3300005329	Corn Rhizosphere	LGVSAATPAFANWWIVRSSDETCLVVDIEPTGREKNITKIGRDSYPTAEEAEADVKRLCKSEAKLK
Ga0070683_1003510892	3300005329	Corn Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGKEEGITKIGKDSYPTAEQAEADVKRLCKSQAKPKRNP*
Ga0066388_1043053271	3300005332	Tropical Forest Soil	ESPAFANWWIVRSSDETCLVVDIEPTGKEKGVTKIGRESYPTAKEAEADVKRLCKSEAKPKQNP*
Ga0070660_1000583052	3300005339	Corn Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDVEPTGKEKGITKIDKDSYPTAEQAEADVKRLCKSQAKPKRNP*
Ga0070660_1002206763	3300005339	Corn Rhizosphere	SEKRLTRFALLTVSALLGVLAATPAFANWWIVRSSDETCLVVDIEPTGNEKGITKIGKDSYPTAEQAEADVKRLCKSEAKPKRNP*
Ga0070689_1009898411	3300005340	Switchgrass Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGKEEGITKIGKDSYPTAEQAEADV
Ga0070691_100484824	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKSQAKPKRNP*
Ga0070673_1005458941	3300005364	Switchgrass Rhizosphere	GAQLKPALSLTMRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKSQAKPKRNP*
Ga0070659_1002109734	3300005366	Corn Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADCKSQ
Ga0070659_1007867162	3300005366	Corn Rhizosphere	LGVLVATPAFANWWIVRSSDETCLVVGIEPTSKEKGITKIGKDSYPTAEQAEADVKRICKSEAKPKRNP*
Ga0070659_1010684751	3300005366	Corn Rhizosphere	TTPAFANWWVVRSSDETCLVVDIEPTGKEEGITKIGKDSYPTAEQAEADVKRLCKSQAKPKRNP*
Ga0070709_102307504	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRGLLAITVVLSFSATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDYIRLRSRPKPIANHRLSRSGIPSFGEAEALSKIQV*
Ga0070714_1003532753	3300005435	Agricultural Soil	LGVSAATPAFANWWIVRSSDETCLVVDIEPTGREKNITKIGRDSYPTAEEAEADVKRLCKSEA
Ga0070714_1008478581	3300005435	Agricultural Soil	RLTRFALLTVSALLGVLAATPAFANWWIVRSSDETCLVVDIEPTGNEKGITKIGKDSYPTAEQAETDVKRLCKSEAKPKRNP*
Ga0070711_1016529551	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDVEPTGKEKGITKIDKDSYPTAEQAEADVKRLCKSQAKPSGIPSFGEAEALSKIQV*
Ga0070708_1020128901	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VSAATPAFANWWIVRSSDETCLVVDIEPTGREKNITKIGRDSYPTAEEAEADVKRLCKSEAKLKQNP*
Ga0070662_1016381652	3300005457	Corn Rhizosphere	SVVERGSQLRTTTRFSLLTVSVLLGVLVATPAFANWWIVRSSDETCLVVGIEPTGKEKGITKIGKDSYPTAEQAEADVKRICKSEAKPKRNP*
Ga0068867_1000419007	3300005459	Miscanthus Rhizosphere	KPALSLTMRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKSQAKPKRNP*
Ga0070679_1003123492	3300005530	Corn Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGEEEGITKIGKDSYPTAEQAEADVKRLCKSQAKPKRNP*
Ga0070684_1002672071	3300005535	Corn Rhizosphere	TANAGFLLTILVLLGVSAATPAFANWWIVRSSDETCLVVDIEPTGREKNITKIGRDSYPTAEEAEADVKRLCKSEAKLKQNP*
Ga0070684_1011413272	3300005535	Corn Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADCKSQAEPKRNL
Ga0070672_1002380473	3300005543	Miscanthus Rhizosphere	MRGLLAITVVLSFSATTPAFANWWVVRSSDETCLVVDIEPTGKEEGITKIGKDSYPTAEQAEADVKRLCKSQAKPKRNP*
Ga0070693_1001403432	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVYIEPTGKEEGITKIGKDSYPTAEQAEADVKRLCKSQAKPKRNP*
Ga0070704_1000986686	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTSKEKGITKIDKDSYPTAEQAEADVKRLC
Ga0068855_1007349363	3300005563	Corn Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADCKSQAEPERNP*
Ga0070664_1004680431	3300005564	Corn Rhizosphere	LGVLAATPAFANWWIVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKTEVKPKRNP*
Ga0068856_1000602903	3300005614	Corn Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDVEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKSQAKPKRNP*
Ga0070702_10001745710	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGKEEGITKIGKDSYPTAEQAEADVKRLCKSQAKPK
Ga0068861_10002754812	3300005719	Switchgrass Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKSQAK
Ga0068870_101429143	3300005840	Miscanthus Rhizosphere	RGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDVEPTGKEKGITKIDKDSYPTAEQAEADVKRLCKSQAKPKRNP*
Ga0075417_100457574	3300006049	Populus Rhizosphere	MRGLLAITVVRSFSATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADCKSQAEPKRNP*
Ga0070715_105561382	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LLTILVLLGVSAATPAFANWWIVRSSDETCLVVDIEPTGREKNITKIGRDSYPTAEEAEADVKRLCKSEAKLKQNS*
Ga0079222_100466002	3300006755	Agricultural Soil	LRGLLAITVVQSFSATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADCKSQAEPKRNP*
Ga0079221_111596431	3300006804	Agricultural Soil	NAGFLLTILVLLGVSAATPAFANWWIVRSSDETCLVVDIEPTGREKNITKIGRDSYPTAEEAEADVKRLCKSEAKLKQNP*
Ga0075428_1003398504	3300006844	Populus Rhizosphere	MRGLLAITVVLSFSATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADCKSQAEPKRNP*
Ga0075425_1018976091	3300006854	Populus Rhizosphere	GWSPSGPGRATKPALSLTMRGLLAITVVLSFSATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADCKSQAEPKRNP*
Ga0075434_1013392532	3300006871	Populus Rhizosphere	LRGLLAITVVQSFSATTPAFANWWVVRSSDETCIVVDIEPTGKEKGITKIGKDSYPTAEQAEA*
Ga0075426_102003643	3300006903	Populus Rhizosphere	MRGLLAITVVLSFSATTPAFANWRVVRSSDETCIVVDIEPTGKEKGITKIGKDSYPTAEQAEADCKSQAEPKRNP*
Ga0105251_103151162	3300009011	Switchgrass Rhizosphere	LLGVSAATPAFANWWIVRSSDETCLVVDIEPTGREKNITKIGRDSYPTAEEAEADVKRLCKSEAKLKQNP*
Ga0111539_111387853	3300009094	Populus Rhizosphere	LSSEQRLTRVSLLIVSTLLGVLAAAPAFANWWIVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKTEVKPKRNP*
Ga0105245_107678311	3300009098	Miscanthus Rhizosphere	LVATPAFANWWIVRSSDETCLVVGIEPTGKEKGITKIGKDSYPTAEQAEADVQRICKS
Ga0075418_104945802	3300009100	Populus Rhizosphere	MRGLLAITVVLLFSATTPAFANWWVVRSSDETCIVIDIEPTGKEKGITKIGKDSYPTAEQAEADCKSQAEPKRNP*
Ga0105247_1000582917	3300009101	Switchgrass Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDSYRTAEQAEADVKRLCKTEAKP
Ga0114129_112531042	3300009147	Populus Rhizosphere	MRGLLAITVILSFSATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADCKSQAEPKRNP*
Ga0114129_130939202	3300009147	Populus Rhizosphere	RGSLLTVSILLGAMAATPAFANWWIVRSSDETCLVVDIEPTGSEKGITKIGRDSYPTAEEAEADVKRLCKSEAKPKQNP*
Ga0105248_1002249716	3300009177	Switchgrass Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCIVVDIEPTGKEKGITKIDKDSYPTAEQAEADVKRLCKSQAKPSGIPSFGEAEALSKIQV*
Ga0105237_119039151	3300009545	Corn Rhizosphere	TTPAFANWWVVRSSDETCLVVDIEPTGNEKGITKIGKDSYPTAEQAEADVKRLCKSEAKPKRNP*
Ga0126384_100269292	3300010046	Tropical Forest Soil	LHKRFSLLAASVILGFSAATPAFANWWIVRSSDETCLVVDIEPTGKEKGITKIGRDSYPTAEEAEADVKRLCKSEAKPKQNP*
Ga0126373_103282103	3300010048	Tropical Forest Soil	MTTRMHKQFSLLGVLVISGVFAVTPAFANWWIVRSSDETCLVVDIEPTGKEKGVTKIGRESYPTAKEAEADVKRLCKSEAKPKQNP*
Ga0126379_100092087	3300010366	Tropical Forest Soil	MHKRFSLLAASVILGFSAATPAFANWWIVRSSDETCLVVDIEPTGKEKGITIIGRDSYPTAEEAEADVKRLCKSEAKPKQNP*
Ga0134128_100650046	3300010373	Terrestrial Soil	LGVSAATPAFANWWIVRSSDETCLVVDIEPTGREKNIIKIGRDSYPTAEEAEADVKRLCKSEAKLKQNP*
Ga0105239_134176211	3300010375	Corn Rhizosphere	ATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKTEVKPKRNP*
Ga0134127_120173561	3300010399	Terrestrial Soil	TVSVLLGVLAATPAFADWWIVRSSDETCLVVDIEPIGNEKGITKIGRDSYPTAEEAEADVKRLCKSEAKPKRNP*
Ga0134122_120626151	3300010400	Terrestrial Soil	VERGSQLRTTTRFSLLTVSVLLGVLVATPAFANLWIVRSSDETCLVVGIEPTGKEKGITKIGKDSYPTAEQAEADVKRICKSEAKPKRNP*
Ga0134121_100317993	3300010401	Terrestrial Soil	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADCKSQAEPKRNP*
Ga0124844_13085031	3300010868	Tropical Forest Soil	MRVSLLTISVLLGVLAASPAFADWWIVRSSDETCLVVDIEPIGSEKGITKIGRDSYPTAEEAEADVKRLCKSEAKPKQNP*
Ga0157304_10053323	3300012882	Soil	SQLRTTTRFSLLTVSVLLGVLVATPAFANWWIVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKTEVKPKRNP*
Ga0157284_101346231	3300012893	Soil	MRGLLAITVVLSFSATTPAFANWWVVRSSDETCLVVDVEPTGKEKGITKIDKDSYPTAEQAEADVKRL
Ga0157285_101376642	3300012897	Soil	MRGLLAITVVLSFSATTPAFANWWVVRSSDETCLVVDVEPTGKEKGITKIDKDSYPTAEQAEA
Ga0157296_101301372	3300012905	Soil	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKTEAKPKRNP*
Ga0157295_100176832	3300012906	Soil	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCIVVDIEPTGKEKGITKIGKDSYPTAEQAEADCKSQAEPKRNP*
Ga0157306_100346941	3300012912	Soil	TPAFANWWIVRSSDETCLVVDIEPIGNEKGITKIGRDSYPTAEEAEADVKRLCKSEAKPKRNP*
Ga0157297_100606342	3300012914	Soil	MRGLLAITVVLSFSATTPAFANWWVVRSSDETCIVVDIEPTGKEKGITKIGKDSYPTAEQAEADCKSQAEPKRNP*
Ga0157302_100490492	3300012915	Soil	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDVEPTGKEKGITKIDKDSYPTAEQAEADCKSQAEPKRNP*
Ga0164299_101468181	3300012958	Soil	TPAFANWWIVRSSDETCLVVDIEPTGREKNITKIGRDSYPTAEEAEVDVKRLCKSEAKLKQNP*
Ga0126369_100075632	3300012971	Tropical Forest Soil	MHKRFSLLAASVILGFSAATPAFANWWIVRSSDETCLVVDIEPTGKEKGITKIGRDSYPTAEAAEAGVKRLWKSEAKPKQNP*
Ga0164309_103721023	3300012984	Soil	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGKEEGITKIGKDSYPTAEQAEADVKRLCK*
Ga0157374_108022771	3300013296	Miscanthus Rhizosphere	TVSALLGVLAATPAFANWWIVRSSDETCLVVDIEPTGNEKGITKIGKDSYPTAEQAEADVKRLCKSEAKPKRNP*
Ga0163163_1002332911	3300014325	Switchgrass Rhizosphere	MRGLLAITVVLSFSATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKSQAKPKRNP*
Ga0163163_104687731	3300014325	Switchgrass Rhizosphere	QRLTRFALLTVSALLGVLAATPAFANWWIVRSSDETCLVVDIEPTGNEKGITKIGKDSYPTAEQAEADVKRLCKSEAKPKRNP*
Ga0157377_101354552	3300014745	Miscanthus Rhizosphere	MRGLLAITVVLTFSATTPAFANWWIVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADCKSQAEPKRNP*
Ga0157377_101924861	3300014745	Miscanthus Rhizosphere	MIIGVIIASSLAGPAFAEWWIVRSSDQECLVVDIEPTGREKNITKIGRDSYPTAEEAEADVKRLCKSEAKLKQNP*
Ga0173483_101759361	3300015077	Soil	FSATTPAFANWWVVRSSDETCLVVDVEPTGKEKGITKIDKDSYPTAEQAEADVKRLCKSQAKPKRNP*
Ga0173483_102009541	3300015077	Soil	AGLGAQLKPALSLTMRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGNEKGITKIGKDSYPTAEQAEADVKRLCKSEAKPKRNP*
Ga0173478_103414202	3300015201	Soil	MRGLLAITVVLSFSATTPAFANWWVVRSSDETCIVVDIEPTGKEKGITKIGKDSYPTAEQAEADCKSQAEPKRN
Ga0132257_1023574662	3300015373	Arabidopsis Rhizosphere	GVLVISGVFAVTPAFANWWIVRSSDETCLVVDIEPTGKEKGVTKIGRDSYPTAEEAEADVKRLCKSEAKPKQNP*
Ga0132255_1041669461	3300015374	Arabidopsis Rhizosphere	ITVVLSFSATTPAFANWWVVRSSDETCIVVDIEPTGKEKGITKIGKDSYPTAEQAEADCKSQAEPKRNP*
Ga0182036_104514502	3300016270	Soil	MHKRFSLLAASVILGSSAATPAFASWWIVRSSDETCLVVDIEPTGKEKGIAKIGKDSYPTAEQAEADVKQLCNEPKAEPKHDSKGSQ
Ga0163161_103104562	3300017792	Switchgrass Rhizosphere	VLLGVSAATPAFANWWIVRSSDETCLVVDIEPTGREKNITKIGRDSYPTAEEAEADVKRLCKSEAKLKQNP
Ga0173482_100912202	3300019361	Soil	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDVEPTGKEKGITKIDKDSYPTAEQAEADVKRLCKSQAKPKRNP
Ga0173482_101274872	3300019361	Soil	ITVVLTFSATTPAFANWWVVRSSDETCIVVDIEPTGKEKGITKIGKDSYPTAEQAEADCKSQAEPKRNL
Ga0173482_104002222	3300019361	Soil	ALLGVLAATPAFANWWIVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKSEAKPKRNL
Ga0173482_106425161	3300019361	Soil	LGVSAATPAFANWWIVRSSDETCLVVDIEPTGREKNITKIGRDSYPTAEEAEADVKRLCKSEAKLKQNP
Ga0173479_104573982	3300019362	Soil	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDVEPTGKEKGITKIDKDSYPTAEQAEADVKRLCKSQAKPKRN
Ga0247797_10431322	3300023057	Soil	SLTMRGLLAITVVLSFSATTPAFANWWVVRSSDETCLVVDVEPTGKEKGITKIDKDSYPTAEQAEADVKRLCKSQAKPKRNP
Ga0247801_10359711	3300023064	Soil	SSSENLNSEKRLTRFALLTVSVLLGVLAATPAFANWWIVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKTEAKPKRNP
Ga0247802_10061971	3300023077	Soil	RFALLTVSALLGVLAATPAFANWWIVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKTEAKPKRNP
Ga0247802_10153311	3300023077	Soil	LRTTTRFSLLTVSVLLGVLVATPAFANWWIVRSSDETCLVVGIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKSQAKPKRNP
Ga0247796_10190581	3300023261	Soil	MRGLLAITVVLSFSATTPAFANWWVVRSSDETCIVVDIEPTGKEKGITKIGKDSYPTAEQAEADCKSQAEPKRNP
Ga0207688_106553622	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	LLTILVLLGVSAATPAFANWWIVRSSDETCLVVDIEPTGREKNITKIGRDSYPTAEEAEADVKRLCKSEAKLKQNP
Ga0207643_107972472	3300025908	Miscanthus Rhizosphere	LSLTMRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDVEPTGKEKGITKIDKDSYPTAEQAEADVKRLCKSQAKPKRNP
Ga0207660_102939153	3300025917	Corn Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKSQAKPKRNP
Ga0207650_118841302	3300025925	Switchgrass Rhizosphere	MRGLLAITVVLTFSTTTPAFANWWVVRSSDETCLVVDIEPTGKEEGITKIGKDSYPTAEQAEA
Ga0207687_100740371	3300025927	Miscanthus Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGKEEGITKIGKDSYPTAEQAEADVKRLCK
Ga0207664_104439393	3300025929	Agricultural Soil	LGVSAATPAFANWWIVRSSDETCLVVDIEPTGREKNITKIGRDSYPTAEEAEADVKRLCKSEAKLKQN
Ga0207711_103601502	3300025941	Switchgrass Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDVEPTGKEKGITKIDKDSYPTAEQAEADVKRLCKSQAKPSGIPSFGEAEALSKIQV
Ga0207661_109903162	3300025944	Corn Rhizosphere	ILVLLGVSAATPAFANWWIVRSSDETCLVVDIEPTGREKNITKIGRDSYPTAEEAEADVKRLCKSEAKLKQNP
Ga0207651_106986072	3300025960	Switchgrass Rhizosphere	PAFANWWIVRSSDETCLVVDIEPTGREKNITKIGRDSYPTAEEAEADVKRLCKSEAKLKQNP
Ga0207651_110270532	3300025960	Switchgrass Rhizosphere	LGVSAATPAFANWWIVRSSDETCLVVDIEPTGREKNITKIGRDSYPTAEEAEADVKRLCKSEAK
Ga0207712_103508531	3300025961	Switchgrass Rhizosphere	AITVVLTFSATTPAFANWWVVRSSDETCVVVDVEPTGKEKGITKKIDKDSYPTAEQAEADVKRLCKSQAKPKRNP
Ga0207640_101275511	3300025981	Corn Rhizosphere	LGVSAATPAFANWWIVRSSDETCLVVDIEPTGREKNIIKIGRDSYPTAEEAEADVKRLCKSEAKLKQNP
Ga0207703_106272662	3300026035	Switchgrass Rhizosphere	TMRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGKEEGITKIGKDSYPTAEQAEADVKRLCKSQAKPKRNP
Ga0207675_1000386353	3300026118	Switchgrass Rhizosphere	MRGLLAITVVLTFSATTPAFANWWIVRSSDETCLVVDIEPTGKEEGITKIGKDSYPTAEQAEADVKRLCKSQAKPKRNP
Ga0207683_101682663	3300026121	Miscanthus Rhizosphere	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKSEAKPKRNP
Ga0209998_101946072	3300027717	Arabidopsis Thaliana Rhizosphere	MRGLLAITVVLSFSATTPAFANWWVVRSSDETCLVVDVEPTGKEKGITKIDKDSYPTAEQAEADVKRLCKSQAERKRNP
Ga0209465_100478992	3300027874	Tropical Forest Soil	MRTRLHKRFSLLAASVILGFSAATPAFANWWIVRSSDETCLVVDIEPTGKEKGITKIGRDSYPTAEEAEADVKRLCKSEAKPKQNP
Ga0209382_109720301	3300027909	Populus Rhizosphere	SLLTVSVLLGVLVATPAFANWWIVRSSDETCLVVGIEPTGKEKGITKIGKDSNPTAEQAEADVKRICKSEAKPKRNP
Ga0268265_108173272	3300028380	Switchgrass Rhizosphere	LVATPAFANWWIIRSSDETCLVVGIEPTGKEKGITKIGQDSYPTAEQAEADVKRICKSE
Ga0268265_121796942	3300028380	Switchgrass Rhizosphere	ALSLTMRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTSKEKGITKIDKDSYPTAEQAEADVKRLCKSQAKPKRNP
Ga0310915_106455712	3300031573	Soil	MHKRFSLLAASVILGSSAATPAFANWWIVRSSDETCLVVDIEPTGKEKGIAKIGKDSYPTAEQAEADVKQLCNESKPEPKHDSKGSQ
Ga0310813_103878342	3300031716	Soil	LVATPAFANWWIVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKTEAKPKRNP
Ga0310813_119313761	3300031716	Soil	MRGLLAITVVLSFSATTPAFANWWVVRSSDETCLVVDVEPTGKEKGITKIDKDSYPTAEQAEADVKRLC
Ga0306918_110470401	3300031744	Soil	MHKRFSLLAASVILGSSAATPAFASWWIVRSSDETCLVVDIEPTGKEKGIAKIGKDSYPTAEQAEADVKQLCNESKPEPKHDSKGSQ
Ga0318546_104396352	3300031771	Soil	MHKRFSLLAASVILGSSAATPAFANWWIVRSSDETCLVVDIEPTGKEKGIAKIGKDSYPTAEQAEADVKQLCNEPKAEPKHDSKGSQ
Ga0310907_100360241	3300031847	Soil	LGVSAATPAFANWWIVRSSDETCLVVDIEPTGREKNITKIGRDSYPTAEEAEADVKRLCKSEAKLKQNS
Ga0306919_101031714	3300031879	Soil	MHKRFSLLAASVILGSSAATPAFANWWIVRSSDETCLVVDIEPTGKEKGIAKIGKDSYPTAEQAEADVKQLCNESKAEPKHDSKGSQ
Ga0306925_109022512	3300031890	Soil	MHKRFSLLAASVILGSSAATPAFANWWIVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAELAEADAKQLCNESKAEPKHDSKGSQ
Ga0310900_107360562	3300031908	Soil	NWWIVRSSDETCLVVDIEPTGREKNITKIGRDSYPTAEEAEADVKRLCKSEAKLKQNP
Ga0306923_102142654	3300031910	Soil	MHKRFSLLAASVILGSSAATPAFASWWIVRSSDETCLVVDIEPTGKEKGIAKIGKDSYPTAEQAEADVKQLCNESKAEPKHDSKGSQ
Ga0310885_105415381	3300031943	Soil	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDIEPTGEEEGITKIGKDSYPTAEQAEADVKRLCKSQAKPKRNP
Ga0310910_110754281	3300031946	Soil	MHKRFSLLAASVILGFSAATPAFANWWIVRSSDETCLVVDIEPTGKEKGIAKIGKDSYPTAEQAEADVKQLCNESKPEPKHDSKGSQ
Ga0318533_105185042	3300032059	Soil	MHKRFSLLAASVILGSSAATPAFASWWIVRSSDETCLVVDIEPTGKEKGIAKIGKDSYQTAEQAEADVKQLCNESKAEPKHDSKGSQ
Ga0310890_104774241	3300032075	Soil	MRGLLAITVVLTFSATTPAFANWWVVRSSDETCLVVDVEPTGKEKGITKIDKDSYPTAEQAEADVKRLCKS
Ga0306924_100721548	3300032076	Soil	MHKRFSLLAASVILGSSAATPAFASWWIVRSSDETCLVVDIEPTGKEKGIAKIGKDSYPTAEQAEADVKQLCNEPKA
Ga0306924_113371792	3300032076	Soil	AASVILGFSAATPAFANWWIVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAELAEADAKQLCNESKAEPKHDSKGSQ
Ga0310811_114053502	3300033475	Soil	VSLLIVSTLLGVLAAAPAFANWWIVRSSDETCLVVDIEPTGKEKGITKIGKDSYPTAEQAEADVKRLCKTEAKPKRNP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F055231

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences