Metagenome / Metatranscriptome Family F055251

Basic Information
Family ID	F055251
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	43 residues
Representative Sequence	MKKISVIGATLVAAAVLCAAPISLHQSQDKGLSLSVDKAQA
Number of Associated Samples	112
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	99.28 %
% of genes near scaffold ends (potentially truncated)	99.28 %
% of genes from short scaffolds (< 2000 bps)	94.96 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Most Common Taxonomy
Group	Unclassified (55.396 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.950 % of family members)
Environment Ontology (ENVO)	Unclassified (23.022 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.043 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 55.07% β-sheet: 0.00% Coil/Unstructured: 44.93%
Feature Viewer

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Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF07813	LTXXQ	5.76
PF00839	Cys_rich_FGFR	5.04
PF13545	HTH_Crp_2	2.16
PF04226	Transgly_assoc	1.44
PF02560	Cyanate_lyase	0.72
PF12200	DUF3597	0.72
PF04632	FUSC	0.72
PF01557	FAA_hydrolase	0.72
PF01381	HTH_3	0.72
PF00072	Response_reg	0.72
PF10009	DUF2252	0.72
PF00111	Fer2	0.72
PF17200	sCache_2	0.72
PF00768	Peptidase_S11	0.72
PF02518	HATPase_c	0.72
PF00226	DnaJ	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	23.02
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	1.44
COG1289	Uncharacterized membrane protein YccC	Function unknown [S]	0.72
COG1513	Cyanate lyase	Inorganic ion transport and metabolism [P]	0.72
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.72

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.40 %
All Organisms	root	All Organisms	44.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.40 %
cellular organisms	root	All Organisms → cellular organisms	44.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.40 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.37 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.40 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21.58 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.40 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.76 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	5.76 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	2.88 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.40 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	5.76 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.32 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.88 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.44 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	0.72 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.40 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	5.76 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.88 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.16 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.44 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.72 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.40 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	5.76 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.88 %
Bradyrhizobium sp. Ec3.3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	1.44 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.44 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	0.72 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	0.72 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0672101	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M
3300000789\|JGI1027J11758_13080474	Not Available	655	Open in IMG/M
3300000891\|JGI10214J12806_12169725	Not Available	649	Open in IMG/M
3300001139\|JGI10220J13317_11368463	Not Available	532	Open in IMG/M
3300002075\|JGI24738J21930_10055916	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300002077\|JGI24744J21845_10043714	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300004800\|Ga0058861_10094911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	611	Open in IMG/M
3300005093\|Ga0062594_103331923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ec3.3	505	Open in IMG/M
3300005105\|Ga0066812_1006287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	753	Open in IMG/M
3300005164\|Ga0066815_10036979	Not Available	759	Open in IMG/M
3300005328\|Ga0070676_10069252	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300005332\|Ga0066388_106084135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	609	Open in IMG/M
3300005332\|Ga0066388_106606844	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	584	Open in IMG/M
3300005439\|Ga0070711_102065870	Not Available	502	Open in IMG/M
3300005457\|Ga0070662_100331814	Not Available	1243	Open in IMG/M
3300005458\|Ga0070681_11679638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	561	Open in IMG/M
3300005559\|Ga0066700_10021311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3633	Open in IMG/M
3300005564\|Ga0070664_101342369	Not Available	675	Open in IMG/M
3300005615\|Ga0070702_100448990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	935	Open in IMG/M
3300005764\|Ga0066903_101603126	Not Available	1234	Open in IMG/M
3300005764\|Ga0066903_105705104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	654	Open in IMG/M
3300006034\|Ga0066656_10885615	Not Available	572	Open in IMG/M
3300006163\|Ga0070715_10042702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1907	Open in IMG/M
3300006175\|Ga0070712_100423556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1104	Open in IMG/M
3300006175\|Ga0070712_100831425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	794	Open in IMG/M
3300006354\|Ga0075021_10383622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	880	Open in IMG/M
3300006806\|Ga0079220_12037734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	513	Open in IMG/M
3300006847\|Ga0075431_101211647	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300006852\|Ga0075433_11104283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	690	Open in IMG/M
3300006852\|Ga0075433_11158384	Not Available	672	Open in IMG/M
3300006853\|Ga0075420_100375639	Not Available	1230	Open in IMG/M
3300006854\|Ga0075425_101943706	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300006903\|Ga0075426_10980586	Not Available	639	Open in IMG/M
3300007076\|Ga0075435_100520812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1029	Open in IMG/M
3300009100\|Ga0075418_12902853	Not Available	523	Open in IMG/M
3300009101\|Ga0105247_10279018	Not Available	1152	Open in IMG/M
3300009147\|Ga0114129_10728002	Not Available	1272	Open in IMG/M
3300009156\|Ga0111538_11532682	Not Available	840	Open in IMG/M
3300009156\|Ga0111538_12273074	Not Available	681	Open in IMG/M
3300009162\|Ga0075423_12947222	Not Available	521	Open in IMG/M
3300009553\|Ga0105249_11158741	Not Available	844	Open in IMG/M
3300010358\|Ga0126370_11333395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	674	Open in IMG/M
3300010360\|Ga0126372_11583811	Not Available	693	Open in IMG/M
3300010366\|Ga0126379_11271322	Not Available	842	Open in IMG/M
3300010371\|Ga0134125_11012693	All Organisms → cellular organisms → Bacteria → Proteobacteria	911	Open in IMG/M
3300010375\|Ga0105239_10688887	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300010375\|Ga0105239_11055667	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300010375\|Ga0105239_11953890	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300010400\|Ga0134122_13209592	Not Available	512	Open in IMG/M
3300011120\|Ga0150983_11111832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	773	Open in IMG/M
3300011120\|Ga0150983_13893407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	699	Open in IMG/M
3300012177\|Ga0153943_1021932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1444	Open in IMG/M
3300012505\|Ga0157339_1063331	Not Available	518	Open in IMG/M
3300012882\|Ga0157304_1028922	Not Available	753	Open in IMG/M
3300012951\|Ga0164300_10102057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1261	Open in IMG/M
3300012951\|Ga0164300_10392119	Not Available	760	Open in IMG/M
3300012957\|Ga0164303_10362901	Not Available	880	Open in IMG/M
3300012957\|Ga0164303_10585526	Not Available	731	Open in IMG/M
3300012960\|Ga0164301_11889425	Not Available	504	Open in IMG/M
3300012984\|Ga0164309_10914004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	716	Open in IMG/M
3300012985\|Ga0164308_10049949	All Organisms → cellular organisms → Bacteria → Proteobacteria	2697	Open in IMG/M
3300012988\|Ga0164306_10633786	Not Available	841	Open in IMG/M
3300012989\|Ga0164305_11065960	Not Available	692	Open in IMG/M
3300012989\|Ga0164305_11378367	Not Available	620	Open in IMG/M
3300013100\|Ga0157373_10048750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3020	Open in IMG/M
3300013296\|Ga0157374_11009541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	851	Open in IMG/M
3300013297\|Ga0157378_10555228	Not Available	1154	Open in IMG/M
3300013306\|Ga0163162_13272513	Not Available	519	Open in IMG/M
3300013307\|Ga0157372_11159774	Not Available	893	Open in IMG/M
3300014497\|Ga0182008_10190402	Not Available	1041	Open in IMG/M
3300015372\|Ga0132256_100600517	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300015372\|Ga0132256_101692751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	742	Open in IMG/M
3300015372\|Ga0132256_102408991	Not Available	629	Open in IMG/M
3300015372\|Ga0132256_102505812	Not Available	617	Open in IMG/M
3300015372\|Ga0132256_102771373	Not Available	589	Open in IMG/M
3300015374\|Ga0132255_101739734	Not Available	946	Open in IMG/M
3300015374\|Ga0132255_104396444	Not Available	597	Open in IMG/M
3300016294\|Ga0182041_10359247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1227	Open in IMG/M
3300016294\|Ga0182041_10484645	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300016341\|Ga0182035_10846486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	804	Open in IMG/M
3300016341\|Ga0182035_10927401	Not Available	769	Open in IMG/M
3300016387\|Ga0182040_10492386	Not Available	978	Open in IMG/M
3300016387\|Ga0182040_11980254	Not Available	500	Open in IMG/M
3300016404\|Ga0182037_11102705	Not Available	695	Open in IMG/M
3300016445\|Ga0182038_10089773	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	2199	Open in IMG/M
3300017994\|Ga0187822_10034911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1358	Open in IMG/M
3300018089\|Ga0187774_10199468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1094	Open in IMG/M
3300019356\|Ga0173481_10232231	Not Available	819	Open in IMG/M
3300019356\|Ga0173481_10841771	Not Available	511	Open in IMG/M
3300019361\|Ga0173482_10204867	Not Available	810	Open in IMG/M
3300021405\|Ga0210387_11505319	Not Available	576	Open in IMG/M
3300021474\|Ga0210390_10529450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	991	Open in IMG/M
3300023066\|Ga0247793_1089017	Not Available	532	Open in IMG/M
3300023261\|Ga0247796_1049837	Not Available	726	Open in IMG/M
3300025315\|Ga0207697_10320005	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300025900\|Ga0207710_10177642	Not Available	1043	Open in IMG/M
3300025904\|Ga0207647_10608623	Not Available	602	Open in IMG/M
3300025911\|Ga0207654_11336962	Not Available	522	Open in IMG/M
3300025912\|Ga0207707_10641027	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300025914\|Ga0207671_10241794	Not Available	1418	Open in IMG/M
3300025916\|Ga0207663_10743545	Not Available	779	Open in IMG/M
3300025919\|Ga0207657_10944554	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300025919\|Ga0207657_10996798	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300025924\|Ga0207694_10760014	Not Available	818	Open in IMG/M
3300025925\|Ga0207650_10312974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1285	Open in IMG/M
3300025933\|Ga0207706_10111636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2405	Open in IMG/M
3300025944\|Ga0207661_12065343	Not Available	516	Open in IMG/M
3300025945\|Ga0207679_10155032	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300026078\|Ga0207702_10950525	Not Available	852	Open in IMG/M
3300026116\|Ga0207674_11221026	Not Available	721	Open in IMG/M
3300026945\|Ga0207743_1007571	Not Available	1216	Open in IMG/M
3300027424\|Ga0209984_1013643	Not Available	1067	Open in IMG/M
3300027748\|Ga0209689_1364186	Not Available	553	Open in IMG/M
3300027765\|Ga0209073_10263084	Not Available	674	Open in IMG/M
3300028596\|Ga0247821_10827360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	612	Open in IMG/M
3300031170\|Ga0307498_10450459	Not Available	516	Open in IMG/M
3300031474\|Ga0170818_100456256	Not Available	732	Open in IMG/M
3300031668\|Ga0318542_10262776	Not Available	880	Open in IMG/M
3300031708\|Ga0310686_115575265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1293	Open in IMG/M
3300031744\|Ga0306918_10965079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	663	Open in IMG/M
3300031847\|Ga0310907_10323000	Not Available	784	Open in IMG/M
3300031847\|Ga0310907_10658797	Not Available	576	Open in IMG/M
3300031890\|Ga0306925_10310052	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1697	Open in IMG/M
3300031910\|Ga0306923_11335299	Not Available	759	Open in IMG/M
3300031910\|Ga0306923_12194116	Not Available	554	Open in IMG/M
3300031912\|Ga0306921_11152578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	866	Open in IMG/M
3300031941\|Ga0310912_10379857	Not Available	1099	Open in IMG/M
3300031947\|Ga0310909_10118826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2144	Open in IMG/M
3300031954\|Ga0306926_10836174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1107	Open in IMG/M
3300031954\|Ga0306926_11633227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	738	Open in IMG/M
3300031954\|Ga0306926_11937328	Not Available	665	Open in IMG/M
3300032001\|Ga0306922_10235860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1965	Open in IMG/M
3300032001\|Ga0306922_10874824	Not Available	935	Open in IMG/M
3300032174\|Ga0307470_10354406	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300032174\|Ga0307470_11407025	Not Available	576	Open in IMG/M
3300032205\|Ga0307472_101423439	Not Available	673	Open in IMG/M
3300032515\|Ga0348332_14051700	Not Available	511	Open in IMG/M
3300033289\|Ga0310914_11230192	Not Available	651	Open in IMG/M
3300033412\|Ga0310810_11250822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	593	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	62.59%
Host-Associated	Host-Associated	37.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.15%
Plants	Host-Associated → Plants	35.97%
Aquatic	Environmental → Aquatic	1.44%
Human	Host-Associated → Human	0.72%
Fungi	Host-Associated → Fungi	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.06%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.91%
Freshwater	Environmental → Aquatic → Freshwater	0.72%
Sediment	Environmental → Aquatic → Sediment	0.72%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.72%
Digestive System	Host-Associated → Human → Digestive System	0.72%
Mycelium	Host-Associated → Fungi → Mycelium	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	18.70%
Loam	Environmental → Terrestrial → Soil → Loam	11.51%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.44%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.72%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.72%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.14%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	18.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.47%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.04%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.60%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.44%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.72%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.72%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.23%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.32%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.32%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	3.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.16%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.16%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.16%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.44%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.44%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.44%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.72%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.72%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.72%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.72%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300002075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4	Host-Associated	Open in IMG/M
3300002077	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3	Host-Associated	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005105	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012177	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ027 MetaG	Host-Associated	Open in IMG/M
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300023066	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026945	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 55 (SPAdes)	Environmental	Open in IMG/M
3300027424	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_06721011	3300000033	Soil	MRKMSMIGATLVGAAILCAVPISLHQSQDKGLSLS
JGI1027J11758_130804742	3300000789	Soil	MKKISLIAATLLGAGVLCAAPISLYQSQDKALSFSVDKAQ
JGI10214J12806_121697252	3300000891	Soil	MMKKISVIGATLLGAAVLCAAPISLHKDLSLSVDKAR
JGI10220J13317_113684631	3300001139	Soil	MKKISLIAATLLGAGVLCAAPISLYQSQDKALSFSVDKAQAYYGVARRHNRRVYRRSYYG
JGI24738J21930_100559161	3300002075	Corn Rhizosphere	MKKISVIGATLVAAAVLCAAPISLHQSQDKGLSLS
JGI24744J21845_100437141	3300002077	Corn, Switchgrass And Miscanthus Rhizosphere	MKNISVIGATLVAAAVLCAAPISLHQSQDKGLSLSVDKALARI
Ga0058861_100949111	3300004800	Host-Associated	MKKISVIGATLVAAAVLCAAPISLQGLSLSVDKARAVVGRPLT
Ga0062594_1033319231	3300005093	Soil	MKKISVIGILVGAAVLCAAPISLHQSLDKGLSLSVDKAQA
Ga0066812_10062872	3300005105	Soil	MKKISVIGAALLGAAVLWAAPISLHLSQDKGMSLSVDKAQARIG
Ga0066815_100369791	3300005164	Soil	MRKTSVMGATLVAAAMLCAAPISLHQAQDQGLSLSVDKAQAYYGHYRRVNRRHG
Ga0070676_100692521	3300005328	Miscanthus Rhizosphere	MMKKISVIGATLLGAAVLCAAPISLHKDLSLSVDKARAVI
Ga0066388_1060841352	3300005332	Tropical Forest Soil	MKKISVIAATLMGAAVLWAAPISLHLSQDKGLSLSVDSALACDR*
Ga0066388_1066068441	3300005332	Tropical Forest Soil	MKKISVIAATLLGAAVLCAAPISLHRSQDKALSLSVDKAQAYYGVYRRHYRRVYRRGYY
Ga0070711_1020658701	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKKISLIAATLVGAAVLCASPISLHQAQDKGLSLSVDKAQAYYGHYRRVH
Ga0070662_1003318144	3300005457	Corn Rhizosphere	MKKISVIGATLVAAAVLCAAPISLHQSQDKGLSLSVDKARA
Ga0070681_116796382	3300005458	Corn Rhizosphere	MKKISVIGILVGAMLCAAPVSLHQSQHNFSLSVDKAQARIGR
Ga0066700_100213117	3300005559	Soil	MKKMSMIGATLLGAAVLCATPISLHQSQHKGLSLSLDSADARVGQPLSAG
Ga0070664_1013423692	3300005564	Corn Rhizosphere	MMKKISVIAATLLGAAVLCAAPISLHKDLSLSVDKAR
Ga0070702_1004489901	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MKKISVIGATLLGAAVLCAAPISLHLSQDKGMSLSVDKAQA
Ga0066903_1016031263	3300005764	Tropical Forest Soil	MKNISLIAATLLGAAVLCASPISLHQAQDKGLSLSVDKAQAYYGHYRRV
Ga0066903_1057051041	3300005764	Tropical Forest Soil	MKKISVIGATLVAAALLCAAPISLNLSQDKGMSLSMDKAQARYGPAGALLRG
Ga0066656_108856151	3300006034	Soil	MKKMSMIGATLLGAAVLCATPISLHQSQHKGLSLSLDSA
Ga0070715_100427026	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKKISLIAATLVGAAVLCAAPISLHQAQDKGLSLSVDKAVAYTY
Ga0070712_1004235561	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKKINVIGAALAAAVLCAAPISFHLSQDKGLTLSVDKA
Ga0070712_1008314251	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MKKISVIGATLVAAAVLCAAPISLHQSQDKGLSLSVDKARAR
Ga0075021_103836222	3300006354	Watersheds	MKKISVIGATLVGAAMLWAAPISLHQSRDTGLSLSVDKAQAVIGRPLSA
Ga0079220_120377342	3300006806	Agricultural Soil	MKKISLIAATLVGAAVLCAAPISLRQAQDKGLSLSVDKAQAYYG
Ga0075431_1012116472	3300006847	Populus Rhizosphere	MKKISVIGATLVAAAVLCPAPISLQGLSLSVDKARAVVGRP
Ga0075433_111042832	3300006852	Populus Rhizosphere	MVPIREENVMKKISVIAATLLGAAMLCAAPISLQLSQDKGLTLSVDKARARIGR
Ga0075433_111583842	3300006852	Populus Rhizosphere	MKKISVIGATLLGAAVLCAAPISLHKDLSLSVDKARAV
Ga0075420_1003756395	3300006853	Populus Rhizosphere	MKKISLIAATLVGAAVLCAAPISLHQVQDKGLSLSVDKAQAYYG
Ga0075425_1019437062	3300006854	Populus Rhizosphere	MKNISVIGATLVAAAVLCAAPISLHQSQDKGLSLSVD
Ga0075426_109805863	3300006903	Populus Rhizosphere	MKKISLIAATLVGAAVLCASPISLHQAQDKGLSLSVDKAVAYTYGHHRRVHRRVHRRYY
Ga0075435_1005208121	3300007076	Populus Rhizosphere	MKKKSMFGATLMGVAILCATPISLHQSQDKGLSLSLDSADARVG
Ga0075418_129028531	3300009100	Populus Rhizosphere	MKKISVIGATLMAAAVLWAAPVSFHQDKGLSLSMDKAAAYTYGHAR
Ga0105247_102790183	3300009101	Switchgrass Rhizosphere	VMKKISVITATLVGAAVLCAAPISLHQSQDKGLTLSVD
Ga0114129_107280021	3300009147	Populus Rhizosphere	MKKISLIAATLVGAAVLCAAPISLHQAQDKSLSLSVDKAQAYYGHHRRVHRRVHRR
Ga0111538_115326821	3300009156	Populus Rhizosphere	MKKISVIGATLLGAAVLCAAPISLHKDLSLSVDKARAVIGRPLTPG
Ga0111538_122730742	3300009156	Populus Rhizosphere	MKKISVIGATLVAAAVLCAAPISLHQSQDKGLSLSVD
Ga0075423_129472222	3300009162	Populus Rhizosphere	MEKISLIAATLVGAAVLCTSPISLHQAQDKGLSLSVDKA
Ga0105249_111587411	3300009553	Switchgrass Rhizosphere	MKNISVIGATLVAAAVLCAAPISLHQSQDKGLSLSVDKALARIGRP
Ga0126370_113333951	3300010358	Tropical Forest Soil	MKKISVIAATLLGAAVLCAAPISLHRSQDKALSLS
Ga0126372_115838112	3300010360	Tropical Forest Soil	VMKKISLIAAALVGAAVLCTSPISLHQAQDKGLSLSV
Ga0126379_112713223	3300010366	Tropical Forest Soil	MRQKISMIGAILMAAAMLCVAPISLHQSGLSLSVD
Ga0134125_110126931	3300010371	Terrestrial Soil	MKKISLIAATLVGAAVLCAAPISLHQAQDKGLSLSVDKAVAYTYGH
Ga0105239_106888871	3300010375	Corn Rhizosphere	VMKKIRVIGATLVAAAVLCAAPISLQGLSLSVDKARAVVGRPLTPGS
Ga0105239_110556672	3300010375	Corn Rhizosphere	MKKISVIAATLVGTAVLCAAPISLHQAQDKGLSLSVDKAVAYTYGHH
Ga0105239_119538901	3300010375	Corn Rhizosphere	MKKISVIGATLVAAAVLCAAPISLQGLSLSVDKARAVVGRPLTPGS
Ga0134122_132095921	3300010400	Terrestrial Soil	MKKISVIGATLVAAAMLCAAPISLHQDQNQGLSLSVDKAQAYYG
Ga0150983_111118321	3300011120	Forest Soil	MKKLSVIRATLLGAAVLCAAPISLHLSQDKGMSLSVDKAQAVIPPGTP
Ga0150983_138934072	3300011120	Forest Soil	MKKVSVIGATLVGAAVLLATPVSLHQSRDTGLSLSVDKAQAVIG
Ga0153943_10219324	3300012177	Attine Ant Fungus Gardens	MKKISVIGATLVGAAVLLATPVSLHQSRDAGLSLSVDKAQAVIGRPLSAGSVAG
Ga0157339_10633312	3300012505	Arabidopsis Rhizosphere	MKKISVIGATLVAAAVLCAAPISLHQSQDKGLSLSVDKAQA
Ga0157304_10289222	3300012882	Soil	MKKISLIAATLVGAALMCAAPISLHQAQDKGLSLSADK
Ga0164300_101020573	3300012951	Soil	MMKKISVIAATLLGSAVLSAAPISLHKDLSLSVDKARAVIGRPLTP
Ga0164300_103921193	3300012951	Soil	MKKISVIGATLLGAAVLCAAPISLHLFQDKGMSLSVDKAQ
Ga0164303_103629011	3300012957	Soil	MKKLSVIRATLLGAAVLCAAPISLHLSQDKGMSLSVDKAQAFIP
Ga0164303_105855262	3300012957	Soil	MKKLSVIGAALLGAAVLCAAPISLHLSQDKGMSLSVDRAQ
Ga0164301_118894252	3300012960	Soil	MKKVSVIRATLLGAAVLCATPISLHLSQDKGMSLSVDKAQAVIPPGT
Ga0164309_109140042	3300012984	Soil	MKKVSVIGATLLGAAVLCAAPISLHLYQDKGMSLSVDKA
Ga0164308_100499491	3300012985	Soil	MKKLSVIGAALLGAAVLCVAPISLHLSQDKGMSLSVDKAQARI
Ga0164306_106337861	3300012988	Soil	MKKLSVIRATLLGAAVLCAAPISLHLSQDKGMSLSVDKAQAFIPAGTPCK
Ga0164305_110659601	3300012989	Soil	MHMKKISVIGATLLGAAVLCAAPISLHLFQDKGMSLSVDKAQARIG
Ga0164305_113783672	3300012989	Soil	MKKISVIGATLVAAAVLCAAPISLHQSLDKGLSLSVDKA
Ga0157373_100487501	3300013100	Corn Rhizosphere	MKNISVIGATLVAAAVLCAAPISLHQSQDKGLSLS
Ga0157374_110095413	3300013296	Miscanthus Rhizosphere	MKTISLIAATLVGAAVLCAAPISLHQAQDRGLSLSMDKAVAYTYGHHRR
Ga0157378_105552281	3300013297	Miscanthus Rhizosphere	MKKISVITATLVGAAVLCASPISLHQAQDKGLSLSVDKAVAYTY
Ga0163162_132725131	3300013306	Switchgrass Rhizosphere	MKNISVIGATLVAAAVLCAAPISLHQSQDKGLSLSVDKALARIG
Ga0157372_111597741	3300013307	Corn Rhizosphere	MKKISLIAATLVGAAVLCAAPISLHQAQDKGLSLSVDKAVAYT
Ga0182008_101904021	3300014497	Rhizosphere	VKEENVMKKISVIGATLVAAAVLCAAPISLHQSQDKGLTLS
Ga0132256_1006005173	3300015372	Arabidopsis Rhizosphere	MKKMSMIGATLLGAAVLCAAPISLHQSQPKGLSLSLDS
Ga0132256_1016927511	3300015372	Arabidopsis Rhizosphere	MKKISLIAATLVGAAVLCAAPISLHQAQDKGLSLSVDKA
Ga0132256_1024089911	3300015372	Arabidopsis Rhizosphere	MKKISLIAATLVGAAVLCASPISLHKDLSLSVDKARAVI
Ga0132256_1025058122	3300015372	Arabidopsis Rhizosphere	MKKISLIAATLVGAAVLCVAPISLHQAQDKGLSLSVDK
Ga0132256_1027713732	3300015372	Arabidopsis Rhizosphere	MKKMSMIGATLMGVAILCATPVSLHTSQDKGLSLSV
Ga0132255_1017397341	3300015374	Arabidopsis Rhizosphere	MKKTSVIGATLVAAAVLCAAPISLHQSQDKGLTLS
Ga0132255_1043964442	3300015374	Arabidopsis Rhizosphere	MKKISVIGATLVAAVMLCAAPISLQLSQDKGLSLSV
Ga0182041_103592474	3300016294	Soil	MKKISIIGATLLGAAVLCAAPVSFHRSQDKALSLSVDKAQAYYGVYRRHYGRV
Ga0182041_104846451	3300016294	Soil	MKKMSMIAATLIGAAILAAVPISLHQSQEKGLSLSVDSAYAVIG
Ga0182035_108464863	3300016341	Soil	MWMKKISVIGATLVGALVLCAAPISLHQSQDKGLTLSVDKARARIGHPLTP
Ga0182035_109274013	3300016341	Soil	MKKISVIAATLVGAAVMCAAPLSLHQAQDKGLLLSVDKAQAYYGHYRRVNR
Ga0182040_104923861	3300016387	Soil	MKKISVIGATLVAAAVLCAAPISLQPSQDKGLSLSVDKAQA
Ga0182040_119802542	3300016387	Soil	MRKISVIGATLVGAAVLCAAPISLHQSQDKGLSLSVDKARAVIGR
Ga0182037_111027052	3300016404	Soil	MIRLIAMKNISVIGATLVAAAVLCAAPISLHQSQDKGL
Ga0182038_100897735	3300016445	Soil	MWMKKLSVIGATLVGALMLCAAPISLQQSQDKGLSLSVDKAQARIGH
Ga0187822_100349112	3300017994	Freshwater Sediment	MKKTSVIGKTSVIGATLLGAAVLLATPVSLHQSRDTGLSLSVDKAQA
Ga0187774_101994681	3300018089	Tropical Peatland	MKKLSLIAATLVGAAVLCAAPISLHQSQDKGLSLSVDKVQAYYGVHRRHHRVARRYY
Ga0173481_102322311	3300019356	Soil	MKKISVIGATLLGAAVLCAAPISLHKDLSLSVDKARAVIGRP
Ga0173481_108417711	3300019356	Soil	MKKISVVAATLVGAAVLCASPVSLHKDLSLSVDKARAVIGRPLT
Ga0173482_102048673	3300019361	Soil	MKKISLIAATLVGAAVLCAAPISLHQAQDKGLSLSVDK
Ga0210387_115053192	3300021405	Soil	MKKISVIGATLVGAAVLLATPVSLHQSRDTGLSLSVDKAQ
Ga0210390_105294501	3300021474	Soil	MKKVSVIGATLVGAAVLLATPVSLHQSRDTGLSLSVDKAQAVIGR
Ga0247793_10890171	3300023066	Soil	MKKISVITATLVGAAVLCAAPISLHQSQDKGLTLS
Ga0247796_10498371	3300023261	Soil	MKKISLIAATLVGAAVLCAAPISLHQAQDKGLSLSVDKAVAYTYGHHRRVHRRVHRR
Ga0207697_103200051	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MKKISVIGATLVAAAVLCAAPISLQGLSLSVDKARAVVGRP
Ga0207710_101776423	3300025900	Switchgrass Rhizosphere	MKKISVITATLVGAAVLCAAPISLHQSQDKGLTLSVDK
Ga0207647_106086231	3300025904	Corn Rhizosphere	MKKISLIAATLVGAAVLCAAPISLHQAQDKGLSLSVDKAQAYYGHYRRVHRRVHRRY
Ga0207654_113369622	3300025911	Corn Rhizosphere	MKKLSMIGILVGAAVLCAAPISLRQSQDKGVSFSVDKAE
Ga0207707_106410271	3300025912	Corn Rhizosphere	MKNISVIGATLVAAAVLCAAPISLHQSQDKGLSLSVDKA
Ga0207671_102417941	3300025914	Corn Rhizosphere	MKKISVITATLVGAAVLCAAPISLHQSQDKGLTLSVDKAQAR
Ga0207663_107435452	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MKKTSVIGATLVAAAVLCAAPISLHQSQDKVLSLSVDKAQARIGRPL
Ga0207657_109445542	3300025919	Corn Rhizosphere	MKKISVIGATLVAAAVLCAAPISLQGLSLSVDKARAVV
Ga0207657_109967981	3300025919	Corn Rhizosphere	MKKIRVIGATLVAAAVLCAAPISLQGLSLSVDKARAVV
Ga0207694_107600141	3300025924	Corn Rhizosphere	MKKISVIAATLLGAAVLCAAPISLHKDLSLSVDKARAVIGRPLTP
Ga0207650_103129741	3300025925	Switchgrass Rhizosphere	MKKISVIGATLVAAAVLCAAPISLQGLSLSVDKARAVVG
Ga0207706_101116366	3300025933	Corn Rhizosphere	MKKISVIGATLVAAAVLCAAPISLHQSQDKGLSLSV
Ga0207661_120653431	3300025944	Corn Rhizosphere	MKKISVIAATLVGAAVLCAAPISLQLSQDKGLTLSVDKARAR
Ga0207679_101550324	3300025945	Corn Rhizosphere	MMKKISVIGATLLGAAVLCAAPISLHKDLSLSVDKARAVIGR
Ga0207702_109505253	3300026078	Corn Rhizosphere	MKKISLIAATLVGAAVLCASPISLHQAQDKGLSLSVDKAV
Ga0207674_112210261	3300026116	Corn Rhizosphere	MKKISVIGATLVAAAVLCAAPISLQLSQDKGLTLSVDKARARIG
Ga0207743_10075713	3300026945	Tropical Forest Soil	MNKISVIGATLVAAAVLCAAPLSLHLSQDKGLSLS
Ga0209984_10136431	3300027424	Arabidopsis Thaliana Rhizosphere	MKNISVIGATLVAAAVLCAAPISLHKDLSLSVDKAQAR
Ga0209689_13641861	3300027748	Soil	MKKMSMIGATLLGAAVLCAAPISLHQSQNKGLSLSLDSADARVGQPL
Ga0209073_102630842	3300027765	Agricultural Soil	MKKISLIAATLVGAAVLCAAPISLRQAQDKGLSLSVDKAQAYYGG
Ga0247821_108273601	3300028596	Soil	MKKISVIGATLLGAAVLCAAPISLHLFQDKGMSLSVDKAQAFIPAG
Ga0307498_104504591	3300031170	Soil	MKKISVIGAALVAAAVVCAAPISLHLSQDKGMSLSVDK
Ga0170818_1004562562	3300031474	Forest Soil	MKKTSVIGATLAAAAMLCAAPISFQLSHDKGLSLSVDKAG
Ga0318542_102627761	3300031668	Soil	MKKISVIAATLVAAAVLCAAPISLHRSQDKALSLSVE
Ga0310686_1155752651	3300031708	Soil	MKKISVIGATLLGAAVLLAAPVSLHQSRDTGLSLSVDKAQAVIGR
Ga0306918_109650791	3300031744	Soil	MWMKKISVIGATLVGALVLCAAPISLHQSQDKGLTLSVDKARARV
Ga0310907_103230002	3300031847	Soil	MKKTSVIGATLAAAAMLCAAPISFQLSQDKGLSLSVDK
Ga0310907_106587971	3300031847	Soil	MKKLSMIGILVGAAVLCAAPISLRQSQDKGVSFSV
Ga0306925_103100524	3300031890	Soil	MKKISIIGATLLGAAVLCAAPVSFHRSQDKALSLSVDKAQAYYGVYRRHYGRVYRRGYYG
Ga0306923_113352991	3300031910	Soil	MKKISVIAATLLGAAVLCTAPLSVHQSQDRGLSVSVDKAQAYYGHYRRVYRRGYYGHGYG
Ga0306923_121941161	3300031910	Soil	MKKMSMIAATLIGAAILAAVPISLHQSQEKGLLLSVDSAYAVI
Ga0306921_111525781	3300031912	Soil	MKKINVIATTLLGAAVLCAVPISLHSGLSLSVDKAQAVIGRPLT
Ga0310912_103798573	3300031941	Soil	MKKISVIAATLVGAAVLCAAPISLHRSQDKALSLSVEKAQAYYGGVYRRHYRRVY
Ga0310909_101188265	3300031947	Soil	MKKIGLIAATLVGAAVLCAAPISLHQSQDKGLTLS
Ga0306926_108361741	3300031954	Soil	MWMKKISVIGATLVGALVLCAAPISLHQSQDKGLTL
Ga0306926_116332271	3300031954	Soil	MKKINVIATTLLGAAVLCAVPISLHSGLSLSVDKAQAV
Ga0306926_119373281	3300031954	Soil	MKKISVIAATLVAAAVLCAAPISLHRSQDKALSLSVEKAQAYYG
Ga0306922_102358604	3300032001	Soil	MKKIGLIAATLVGAAVLCAAPISLHQSQDKGLTLSVDKA
Ga0306922_108748242	3300032001	Soil	MKKISVIAATLVGAAVLCAAPISLHRSQDKALSLSAEKAQAYYG
Ga0307470_103544061	3300032174	Hardwood Forest Soil	MKKISVIGATLVAAAVLCAAPISLHQSQDKGLTLS
Ga0307470_114070251	3300032174	Hardwood Forest Soil	MKKLSVIGATLLGAAVLCAAPITLHLSQDRGLSVDK
Ga0307472_1014234392	3300032205	Hardwood Forest Soil	MKKLSVIRATLLGAAVLCAAPISLHLSQDKGMSLSVDKAQAF
Ga0348332_140517002	3300032515	Plant Litter	MRKISVIGATLVGAAVLLATPVSLHQSRDTGLSLSVDKAQAVIG
Ga0310914_112301922	3300033289	Soil	MKKISMIAATLVGGAVLCAAPISLHQSQDKGLTLSVDKARAVIGR
Ga0310810_112508221	3300033412	Soil	MKKISVIGATLVGAAVLCAAPISLQLSQDKGLTLSVDKARA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055251

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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