Metagenome / Metatranscriptome Family F055259

Basic Information
Family ID	F055259
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	62 residues
Representative Sequence	MNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLRTHLARKREADPRPVTA
Number of Associated Samples	121
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.07 %
% of genes near scaffold ends (potentially truncated)	33.81 %
% of genes from short scaffolds (< 2000 bps)	82.73 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Bacteria (52.518 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (25.180 % of family members)
Environment Ontology (ENVO)	Unclassified (36.691 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (39.568 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.41% β-sheet: 0.00% Coil/Unstructured: 46.59%
Feature Viewer

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Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF00291	PALP	23.02
PF01842	ACT	20.14
PF11253	DUF3052	8.63
PF03308	MeaB	6.47
PF14026	DUF4242	4.32
PF01904	DUF72	3.60
PF00155	Aminotran_1_2	1.44
PF00441	Acyl-CoA_dh_1	0.72
PF02653	BPD_transp_2	0.72
PF07690	MFS_1	0.72
PF00378	ECH_1	0.72
PF05977	MFS_3	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	3.60
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.72
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.72

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.52 %
Unclassified	root	N/A	47.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.52 %
Unclassified	root	N/A	47.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.52 %
Unclassified	root	N/A	47.48 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.48 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	33.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.44 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.48 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7.91 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	6.47 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.48 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.32 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.48 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.32 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.48 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.32 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.48 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.32 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.72 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10091055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2117	Open in IMG/M
3300003267\|soilL1_10008983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14789	Open in IMG/M
3300003319\|soilL2_10076804	All Organisms → cellular organisms → Bacteria	1669	Open in IMG/M
3300003324\|soilH2_10166347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1158	Open in IMG/M
3300003987\|Ga0055471_10134407	Not Available	746	Open in IMG/M
3300004081\|Ga0063454_100008613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2598	Open in IMG/M
3300004114\|Ga0062593_100192935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1611	Open in IMG/M
3300004114\|Ga0062593_102916005	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300004156\|Ga0062589_100307375	Not Available	1230	Open in IMG/M
3300004156\|Ga0062589_100360117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1160	Open in IMG/M
3300004157\|Ga0062590_100026427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2851	Open in IMG/M
3300004463\|Ga0063356_101486397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1002	Open in IMG/M
3300004463\|Ga0063356_101911727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	895	Open in IMG/M
3300004479\|Ga0062595_100082934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1630	Open in IMG/M
3300004479\|Ga0062595_101374918	Not Available	641	Open in IMG/M
3300004480\|Ga0062592_101948480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	579	Open in IMG/M
3300004643\|Ga0062591_101898472	Not Available	611	Open in IMG/M
3300005093\|Ga0062594_100837074	Not Available	857	Open in IMG/M
3300005332\|Ga0066388_100060178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4015	Open in IMG/M
3300005338\|Ga0068868_100269926	Not Available	1437	Open in IMG/M
3300005340\|Ga0070689_100400673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1160	Open in IMG/M
3300005343\|Ga0070687_100093672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1666	Open in IMG/M
3300005345\|Ga0070692_10705174	Not Available	679	Open in IMG/M
3300005347\|Ga0070668_102255232	Not Available	503	Open in IMG/M
3300005438\|Ga0070701_10482363	Not Available	801	Open in IMG/M
3300005441\|Ga0070700_100012170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4791	Open in IMG/M
3300005444\|Ga0070694_100130248	All Organisms → cellular organisms → Bacteria	1816	Open in IMG/M
3300005456\|Ga0070678_101563891	Not Available	618	Open in IMG/M
3300005543\|Ga0070672_100372302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1221	Open in IMG/M
3300005548\|Ga0070665_101999615	Not Available	585	Open in IMG/M
3300005549\|Ga0070704_100806783	Not Available	839	Open in IMG/M
3300005614\|Ga0068856_101699177	Not Available	644	Open in IMG/M
3300005615\|Ga0070702_100018340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3630	Open in IMG/M
3300005618\|Ga0068864_101959810	Not Available	592	Open in IMG/M
3300005842\|Ga0068858_100084128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2960	Open in IMG/M
3300005884\|Ga0075291_1033222	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300009101\|Ga0105247_10786509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	725	Open in IMG/M
3300009553\|Ga0105249_11483304	Not Available	750	Open in IMG/M
3300009789\|Ga0126307_10003126	All Organisms → cellular organisms → Bacteria	11250	Open in IMG/M
3300009840\|Ga0126313_10546558	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300010037\|Ga0126304_10009127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5334	Open in IMG/M
3300010040\|Ga0126308_11358948	Not Available	504	Open in IMG/M
3300010044\|Ga0126310_10816118	Not Available	719	Open in IMG/M
3300010147\|Ga0126319_1235281	Not Available	625	Open in IMG/M
3300010371\|Ga0134125_10279233	All Organisms → cellular organisms → Bacteria	1855	Open in IMG/M
3300010403\|Ga0134123_10170945	All Organisms → cellular organisms → Bacteria	1821	Open in IMG/M
3300010403\|Ga0134123_13476436	Not Available	510	Open in IMG/M
3300012212\|Ga0150985_109485368	Not Available	933	Open in IMG/M
3300012469\|Ga0150984_113102898	Not Available	628	Open in IMG/M
3300012508\|Ga0157315_1056734	Not Available	541	Open in IMG/M
3300012893\|Ga0157284_10189371	Not Available	612	Open in IMG/M
3300012895\|Ga0157309_10353955	Not Available	512	Open in IMG/M
3300012896\|Ga0157303_10154349	Not Available	620	Open in IMG/M
3300012897\|Ga0157285_10009827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1849	Open in IMG/M
3300012899\|Ga0157299_10108049	Not Available	730	Open in IMG/M
3300012902\|Ga0157291_10266170	All Organisms → cellular organisms → Bacteria	578	Open in IMG/M
3300012905\|Ga0157296_10141976	Not Available	708	Open in IMG/M
3300012905\|Ga0157296_10272563	Not Available	579	Open in IMG/M
3300012907\|Ga0157283_10037296	Not Available	1041	Open in IMG/M
3300012907\|Ga0157283_10138632	Not Available	702	Open in IMG/M
3300012908\|Ga0157286_10065972	Not Available	976	Open in IMG/M
3300012908\|Ga0157286_10163144	Not Available	721	Open in IMG/M
3300012911\|Ga0157301_10095326	Not Available	864	Open in IMG/M
3300013096\|Ga0157307_1140979	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300013307\|Ga0157372_12689383	Not Available	571	Open in IMG/M
3300015373\|Ga0132257_100219022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2262	Open in IMG/M
3300015373\|Ga0132257_104239498	Not Available	522	Open in IMG/M
3300017965\|Ga0190266_10012102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2251	Open in IMG/M
3300018066\|Ga0184617_1208438	Not Available	583	Open in IMG/M
3300018073\|Ga0184624_10119150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1142	Open in IMG/M
3300018073\|Ga0184624_10395853	Not Available	614	Open in IMG/M
3300018081\|Ga0184625_10503544	Not Available	611	Open in IMG/M
3300018465\|Ga0190269_10117590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1328	Open in IMG/M
3300018466\|Ga0190268_11172237	Not Available	634	Open in IMG/M
3300018469\|Ga0190270_10013997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4696	Open in IMG/M
3300018469\|Ga0190270_12721070	Not Available	557	Open in IMG/M
3300019356\|Ga0173481_10007763	All Organisms → cellular organisms → Bacteria	2946	Open in IMG/M
3300019356\|Ga0173481_10031276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1709	Open in IMG/M
3300019356\|Ga0173481_10055951	Not Available	1375	Open in IMG/M
3300019362\|Ga0173479_10254107	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	775	Open in IMG/M
3300019362\|Ga0173479_10717475	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300019867\|Ga0193704_1048969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	829	Open in IMG/M
3300019869\|Ga0193705_1020751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1429	Open in IMG/M
3300021078\|Ga0210381_10145456	Not Available	801	Open in IMG/M
3300021510\|Ga0222621_1125534	Not Available	546	Open in IMG/M
3300022756\|Ga0222622_10472971	Not Available	892	Open in IMG/M
3300022883\|Ga0247786_1004747	Not Available	2535	Open in IMG/M
3300024055\|Ga0247794_10063890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1035	Open in IMG/M
3300025901\|Ga0207688_10021932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3492	Open in IMG/M
3300025903\|Ga0207680_10670277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	743	Open in IMG/M
3300025904\|Ga0207647_10222275	All Organisms → cellular organisms → Bacteria → Proteobacteria	1088	Open in IMG/M
3300025908\|Ga0207643_10026921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3187	Open in IMG/M
3300025909\|Ga0207705_10727238	Not Available	771	Open in IMG/M
3300025911\|Ga0207654_11109933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	576	Open in IMG/M
3300025917\|Ga0207660_10903938	Not Available	720	Open in IMG/M
3300025923\|Ga0207681_10278733	Not Available	1316	Open in IMG/M
3300025926\|Ga0207659_11549721	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300025927\|Ga0207687_10073627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2446	Open in IMG/M
3300025934\|Ga0207686_11627702	Not Available	533	Open in IMG/M
3300025936\|Ga0207670_11233397	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300025937\|Ga0207669_10299778	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300025938\|Ga0207704_11020196	Not Available	700	Open in IMG/M
3300025945\|Ga0207679_10175872	All Organisms → cellular organisms → Bacteria	1767	Open in IMG/M
3300025945\|Ga0207679_10181377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1742	Open in IMG/M
3300025960\|Ga0207651_10671950	Not Available	911	Open in IMG/M
3300025961\|Ga0207712_10990098	Not Available	746	Open in IMG/M
3300026035\|Ga0207703_10048673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3423	Open in IMG/M
3300026118\|Ga0207675_100207322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1884	Open in IMG/M
3300026142\|Ga0207698_11799702	Not Available	628	Open in IMG/M
3300027695\|Ga0209966_1025407	Not Available	1175	Open in IMG/M
3300027907\|Ga0207428_10021505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5462	Open in IMG/M
3300028705\|Ga0307276_10219518	Not Available	505	Open in IMG/M
3300028707\|Ga0307291_1022775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1432	Open in IMG/M
3300028711\|Ga0307293_10003117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4223	Open in IMG/M
3300028715\|Ga0307313_10212624	Not Available	601	Open in IMG/M
3300028719\|Ga0307301_10028524	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300028744\|Ga0307318_10000525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12553	Open in IMG/M
3300028810\|Ga0307294_10095995	Not Available	933	Open in IMG/M
3300028885\|Ga0307304_10030229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1902	Open in IMG/M
3300030336\|Ga0247826_11623644	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300031093\|Ga0308197_10473169	Not Available	507	Open in IMG/M
3300031548\|Ga0307408_100175738	All Organisms → cellular organisms → Bacteria	1713	Open in IMG/M
3300031548\|Ga0307408_100211007	All Organisms → cellular organisms → Bacteria	1578	Open in IMG/M
3300031852\|Ga0307410_10151621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1726	Open in IMG/M
3300031852\|Ga0307410_10515179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	986	Open in IMG/M
3300031858\|Ga0310892_10068137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1837	Open in IMG/M
3300031858\|Ga0310892_10937692	Not Available	607	Open in IMG/M
3300031903\|Ga0307407_10316702	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300031913\|Ga0310891_10279291	Not Available	584	Open in IMG/M
3300031938\|Ga0308175_100306773	All Organisms → cellular organisms → Bacteria	1621	Open in IMG/M
3300031943\|Ga0310885_10181745	Not Available	1028	Open in IMG/M
3300032000\|Ga0310903_10623717	Not Available	576	Open in IMG/M
3300032002\|Ga0307416_100575045	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300032075\|Ga0310890_10094481	All Organisms → cellular organisms → Bacteria	1856	Open in IMG/M
3300032179\|Ga0310889_10568368	Not Available	582	Open in IMG/M
3300033550\|Ga0247829_10048360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2975	Open in IMG/M
3300034660\|Ga0314781_153999	Not Available	500	Open in IMG/M
3300034668\|Ga0314793_166506	Not Available	508	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.63%
Host-Associated	Host-Associated	32.37%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.15%
Plants	Host-Associated → Plants	32.37%
Aquatic	Environmental → Aquatic	6.47%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.67%
Sediment	Environmental → Aquatic → Sediment	4.32%
Freshwater	Environmental → Aquatic → Freshwater	1.44%
Marine	Environmental → Aquatic → Marine	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.79%
Loam	Environmental → Terrestrial → Soil → Loam	10.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.07%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.16%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.72%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.72%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.72%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.07%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.16%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.44%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.72%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.72%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	25.18%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.63%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.32%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.16%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.16%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.16%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.16%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.16%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.16%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.16%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.44%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.44%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.44%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.72%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.72%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.72%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012508	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510	Host-Associated	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034660	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_100910553	3300001686	Soil	MNYSPHTHLAIARARHEDMLRDAEHARLARSFGENKSGTLSRLWTHLTRKREAGPRPVTA
soilL1_1000898310	3300003267	Sugarcane Root And Bulk Soil	MYYNPHSHLAIARARHEDMLLQAERARLARSFDEERPGVISRLRTHLARKRAADPRPVTA
soilL2_100768043	3300003319	Sugarcane Root And Bulk Soil	MYYSPHSHLAIARARHEDMLRDAERARLARSFDDERPGVFSRLRTHLSRKHEPSAKPVTA
soilH2_101663472	3300003324	Sugarcane Root And Bulk Soil	MYYSPHSHLAIARARHEDMLRDAERARLARSFDDERPGVFSRLRKHLSRKRELSAKPITV
Ga0055471_101344071	3300003987	Natural And Restored Wetlands	SGRLARPVFMYSPHAHMQIAYQRHEDMLRRAERDRLASLFEDERPSTFSRLRARLSRREESPRPVTSPC*
Ga0063454_1000086132	3300004081	Soil	MNYSPHIHLAIARARHEDMLRDAEHARLARSFGENKSGTLSRLWTHLTRKREAGPRPVTA
Ga0062593_1001929352	3300004114	Soil	MNYSPHSHLAIARARHEDMLQQAEHARLARSFDDERPGVISRLRSHLARKRQPAPRPVAA
Ga0062593_1029160052	3300004114	Soil	MRLVGMYYSPHSHLAIARARHEDMLRDAERARLARSFDDERPGVFTRLRTHLSRKREPNARPITV*
Ga0062589_1003073752	3300004156	Soil	IARARHEDMLRDAERARLARSFDDERPGVFTRLRTHLSRKREPNARPITV*
Ga0062589_1003601172	3300004156	Soil	MNYSPHSHLAIARARHEDMLQQAEHARLARSFDNERPGVISRLRSHLARKRQPAQRPVAA
Ga0062590_1000264274	3300004157	Soil	MNYSPHSHLAIARARHEDMLQQAEHARLARSFDDERPGVISRLRSHLARKRQPAQRPVAA
Ga0063356_1014863972	3300004463	Arabidopsis Thaliana Rhizosphere	MYYSPHSHLAIARARHEDMVRDAERARLARSFNDERPGVFTRLRTHLSRKREPNARPITV
Ga0063356_1019117272	3300004463	Arabidopsis Thaliana Rhizosphere	VRPVRMYYSPHSHLAIARDRHEDMLREAERARLARSFVDERPSAFSRLRTHLARKREPEPRPVTT*
Ga0062595_1000829341	3300004479	Soil	MNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLLTHLARKRE
Ga0062595_1013749181	3300004479	Soil	MYYSPHTHLALARARHEDMLRQADRARLARSFQSERPGAFSRLWAHLARKRQAHPSPITI
Ga0062592_1019484802	3300004480	Soil	MYYSPHTHLAIARARQEDLLREAERARLARSFDDERPGVFTRLRTHLSRKREPSARPITV
Ga0062591_1018984722	3300004643	Soil	MNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLRTHLARKREADPRPVTA
Ga0062594_1008370742	3300005093	Soil	MYYSPHSHLAIARARHEDMLLEAERARLARSFDEERPSVISRLKLHLARKREAEPRPVAA
Ga0066388_1000601785	3300005332	Tropical Forest Soil	MLYNSHTHLAIARDRHEDMIRQAEQARLARSFSDERPGALSRLRTHLSRKREQPRPVTA*
Ga0068868_1002699262	3300005338	Miscanthus Rhizosphere	SRPLARPVGMYYSPHSHLAIARARHEDMLREAERTRLARSFEDERPSAFSRLRTYLARKREPEPRTVTA*
Ga0070689_1004006732	3300005340	Switchgrass Rhizosphere	MEEGCSPVRLVGMNYSPHTHLTIARARHEDMLRDADRARLARSLDEDKPSTLSRLRTHLARKREADPRPVTA*
Ga0070687_1000936722	3300005343	Switchgrass Rhizosphere	MEEGCSPVRLVGMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPSTLSRLRTHLARKREADPRPVTA*
Ga0070692_107051741	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MEEDSSPVRLVGMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPSTLSRLRTHLARKREADPRPVTA*
Ga0070668_1022552322	3300005347	Switchgrass Rhizosphere	GMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPSTLSRLRTHLARKREADPRPVTA*
Ga0070701_104823631	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	CSPVRLVGMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPSTLSRLRTHLARKREADPRPVTA*
Ga0070700_1000121704	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MNYSPHSHLAIARARHEDMLREAERTRLARSFEDERPSAFSRLRTYLARKREPEPRTVTA
Ga0070694_1001302482	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MYYSPHSHLAIARARHEDMLREAERTRLARSFKDERPSAFSRLRTYLARKREPEPRTVTA
Ga0070678_1015638912	3300005456	Miscanthus Rhizosphere	PHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLRTHLARKREADPRPVTA*
Ga0070672_1003723022	3300005543	Miscanthus Rhizosphere	MEEGCSPVRLVGMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLRTHLARKREADPRPVTA*
Ga0070665_1019996152	3300005548	Switchgrass Rhizosphere	MGMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLLTHLARKREADPRPVTA*
Ga0070704_1008067832	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	HLTIARARHEDMLRDADRARLARSFDEDKPSTLSRLRTHLARKREADPRPVTA*
Ga0068856_1016991772	3300005614	Corn Rhizosphere	MNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLRTHLARKREADPRPV
Ga0070702_1000183405	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MEEDCSPVRLVGMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPSTLSRLRTHLARKREADPRPVTA*
Ga0068864_1019598101	3300005618	Switchgrass Rhizosphere	MEEGCSPVRLVGMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLLTHLARKREADPRPVTA*
Ga0068858_1000841282	3300005842	Switchgrass Rhizosphere	MGMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPSTLSRLRTHLARKREADPRPVTA*
Ga0075291_10332222	3300005884	Rice Paddy Soil	MDYSPHTHLAIARARHEDMLQQAERARLVRSFENERPGVVSRLRTYLTRKHAADPRPVTA
Ga0105247_107865093	3300009101	Switchgrass Rhizosphere	MEEDCSPVRLVGMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPSTLSRLRTHLARKR
Ga0105249_114833042	3300009553	Switchgrass Rhizosphere	MEEDCSPVRLVGMNYSPHTHLTIARARHEDMLRDADRARLARSLDEDKPSTLSRLRTHLARKREADPRPVTA*
Ga0126307_100031263	3300009789	Serpentine Soil	MYYSPHSHLAIARARHEDMLRDAERARLARSFDEEKPGMLSHLWTHLARKREADPRPVTA
Ga0126313_105465583	3300009840	Serpentine Soil	MYYSPHSHLAIARARHEDMLRDAERARLARSFDEERPGMLSRLRTHLGRKRLPDPR
Ga0126304_100091272	3300010037	Serpentine Soil	VVDLCYRPHSHLALARAGHEDMLRDAEGGGLARSFDEEKPGMLSHLWTHLARKREADPRPVTA*
Ga0126308_113589481	3300010040	Serpentine Soil	MYYSPHSHLAIARARHDDMLRDAERARLAHSFGEDKPGLLSRLWTHLGRKREADPRPVTA
Ga0126310_108161182	3300010044	Serpentine Soil	MYYSPHSHLAIARARHEDMLRDAERARLARSFDEERPGMLSRLRTHLGRKRLPDPRPVAA
Ga0126319_12352811	3300010147	Soil	EEGCPPARLVGMYYSPHSHLAIARARHEDMLRDADRARLARSFTEDKPGPLSRLWTHLARKREADPRPVTA*
Ga0134125_102792332	3300010371	Terrestrial Soil	MYYSPHSHLAIARARHEDMLRDAERARLARSFEDERPSAFSRLRTYLARKREPEPRTVTA
Ga0134123_101709452	3300010403	Terrestrial Soil	MNYSPHSHLAIARARHEDMLREAERTRLARSFKDERPSAFSRLRTYLARKREPEPRTVTA
Ga0134123_134764362	3300010403	Terrestrial Soil	MNYSPHTHLTIARARHEDMLRDADRARLGRSFDEDKPGTLSRLLTHLARKREADPRPVTA
Ga0150985_1094853682	3300012212	Avena Fatua Rhizosphere	MNYSPHSHLVIARARHEDMLRDAERARLARSFGEHKPGMLSRLWTSLARKREADPRPVTA
Ga0150984_1131028981	3300012469	Avena Fatua Rhizosphere	PHSHLVIARARHEDMLRDAERARLARSFGEHKPGMLSRLWTSLARKREADPRPVTA*
Ga0157315_10567341	3300012508	Arabidopsis Rhizosphere	LAIARARHEDMLQQAEHARLARSFDDERPGVISRLRSHLARKRQPAPRPVAA*
Ga0157284_101893712	3300012893	Soil	MYYSPHSHLAIARARHEDMLRDAERARLARSFDDERPGVFTRLRTHLSRKRELNARPITV
Ga0157309_103539552	3300012895	Soil	MEEGCSPVRLVGMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLLTHRARKREADPRPVTA*
Ga0157303_101543492	3300012896	Soil	VGVNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLLTHLARKREADPRPVTA*
Ga0157285_100098272	3300012897	Soil	MYYSPHSHLAIARARHEDMLRDADRARLARSFDEDKPGTLSRLLTHLARKREADPRPVTA
Ga0157299_101080492	3300012899	Soil	MYYSPHSHLAIARDRHEDMLREAERARLARSFVDERPSAFSRLRTHLDRKREPEPRPVTT
Ga0157291_102661701	3300012902	Soil	MYYSPHSHLAIARARHEDMLQQAEHARLARSFDDERPGVISRLRSHLARKRQPAQRPVAA
Ga0157296_101419762	3300012905	Soil	MYYTPHSHLAIARARHEDMLREAERTRLARSFKDERPSAFSRLRTYLARKREPEPRTVTA
Ga0157296_102725631	3300012905	Soil	PVRLVGMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLLTHLARKREADPRPVTA*
Ga0157283_100372962	3300012907	Soil	MYYTPHSHLAIARARHEDMLREAERTRLARSFKDERPGVFTRLRTHLSRKRELNARPITV
Ga0157283_101386322	3300012907	Soil	MYYSPHSHLAIARARHEDMLRDAERARLARSFDDERPGVFTRLRTHLSRKREPNARPITV
Ga0157286_100659722	3300012908	Soil	MYYTPHSHLAIARARHEDMLREAERTRLARSFKDERSSTFSRLRTYLARKREPEPRTVTA
Ga0157286_101631441	3300012908	Soil	GCSPARPVSMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLRTHLARKREADPRPVTA*
Ga0157301_100953261	3300012911	Soil	MYYTPHSHLAIARARHEDMLREAERTRLARCFKDERPSAFSRLRTYLARKREPEPRTVTA
Ga0157307_11409791	3300013096	Soil	MNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLLTHLARKREADPRPV
Ga0157372_126893832	3300013307	Corn Rhizosphere	MYYSPHSLLAIARARHEDMLREAERTRLARSFKDERPSAFSRLRTYLARKREPEPRTVTA
Ga0132257_1002190223	3300015373	Arabidopsis Rhizosphere	MYYSPHSHLAIARARHEDMLREAERTRLARSFENERPSAFSRLRTYLARKRELQPRTVTA
Ga0132257_1042394981	3300015373	Arabidopsis Rhizosphere	RARHEDMLRDADRARLARSFDEDKPSTLSRLRTHLARKREADPRPVTA*
Ga0190266_100121021	3300017965	Soil	AREESCPPARLVGMYYSPHSHLAIARARHEDMLRDADRARLARSFNEDKPGPLSRLWTHLARKRAADPRPVTA
Ga0184617_12084382	3300018066	Groundwater Sediment	MNYSPHSHLAIARARHEDMLRDADRARLARSFAEDKPGPLSRLWTHLARKRAADPRPVTA
Ga0184624_101191503	3300018073	Groundwater Sediment	MYYSPHSHLAIARARHEDMLREAERTRLARSFEDERPSAFSRLRTYLARKREPEPRTVTA
Ga0184624_103958531	3300018073	Groundwater Sediment	KETCPLARLVGMDYSPHTHLAIARARHEDMLRDADRARLSRSFDEDKPGTLSRLLTHLARKREADPRPVTA
Ga0184625_105035442	3300018081	Groundwater Sediment	MDYSPHTHLAIARARHEDMLRDAERARLARSFDETKPGSLSRLWTHLARKREADPRPVTA
Ga0190269_101175902	3300018465	Soil	MYYSPHSHLAIARARHEDMLRDADRARLARSFAEDKPGPLSRLWTHLARKREADPRPVTA
Ga0190268_111722372	3300018466	Soil	MYYSPHSHLAIARARQEDMLRDAERARLARRFEDERPGVFTRLWTHVSRKREPSARPITA
Ga0190270_100139974	3300018469	Soil	MYYSPHSHLAIARARHEDMLRDADRARLARSFNEDKPGPLSRLWTHLARKRAADPRPVTA
Ga0190270_127210701	3300018469	Soil	RLVGMYYSPHSHLAIARARHEDMLRDADRARLARSFAEDQPGPLSRLWTHLARKREADPRPVTA
Ga0173481_100077633	3300019356	Soil	MYYTPHSHLAIARARHEDMLREAERTRLARSFKDERPSTFSRLRTYLARKREPEPRTVTA
Ga0173481_100312764	3300019356	Soil	MYYSPHSHLAIARARHEDMLRDADRARLARSFAEDKPGPLSRLWTHLAR
Ga0173481_100559511	3300019356	Soil	GCSPVRLVGMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGPLSRLWTHLARKREADPRPVTA
Ga0173479_102541072	3300019362	Soil	MRLVGMYYSPHSHLAIARARHEDMLRDAERARLARSFDDERPGVFTRLRTHLSRKREPNARPITV
Ga0173479_107174751	3300019362	Soil	MNYSPHSHLAIARARHEDMLQQAEHARLARSFDNERPGVISRLRSHLARKRQPAPRPVAA
Ga0193704_10489692	3300019867	Soil	MNYSPHTHLTIARARHEDMLRDADRARLARSFAEDKPGPLSRLWTHLARKREADPRPVTA
Ga0193705_10207512	3300019869	Soil	MYYSPHSHLAIARARHEDMIRDADRARLARSFAEDKPGPLSRLWTHLARKREADPRPVTA
Ga0210381_101454561	3300021078	Groundwater Sediment	DYSPHSHLAIARARHEDMLRDAERARLARSFDETKPGSLSRLWTHLARKREADPRPVTA
Ga0222621_11255342	3300021510	Groundwater Sediment	MDYSPHTHLAIARARHEDMIRDADRARLARSFAEDKPGPLSRLWTHLARKREADPRPVTA
Ga0222622_104729712	3300022756	Groundwater Sediment	PHTHLAIARARHEDMLRDAERARLARSFDETKPGSLSRLWTHLARKRAADPRPVTA
Ga0247786_10047473	3300022883	Soil	MNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLLTHLARKREADPRPVTA
Ga0247794_100638902	3300024055	Soil	MEEGCSPVRLVGMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLRTHLARKREADPRPVTA
Ga0207688_100219325	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MYYSPHSHLAIARARHEDMLREAERTRLACSFEDERPSAFSRLRTYLARKREPEPRTVTA
Ga0207680_106702772	3300025903	Switchgrass Rhizosphere	MNYSPHTHLTIARARHEDMLRDADRARLARSLDEDKPSTLSRLRTHLARKREADPRPVTA
Ga0207647_102222753	3300025904	Corn Rhizosphere	EEGCSPVRLVGMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLRTHLARKREADPRPVTA
Ga0207643_100269215	3300025908	Miscanthus Rhizosphere	MNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPSTLSRLRTHLARKREADPRPVTA
Ga0207705_107272381	3300025909	Corn Rhizosphere	NYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLRTHLARKREADPRPVTA
Ga0207654_111099332	3300025911	Corn Rhizosphere	MNYSPHSHLAIARARHEDMLRDADRARLARSFDEDKPGTLSRLLTHLARKREADPRPVTA
Ga0207660_109039382	3300025917	Corn Rhizosphere	VGMYYSPHSHLAIARARHEDMLREAERTRLARSFEDERPSAFSRLRTYLARKREPEPRTVTA
Ga0207681_102787332	3300025923	Switchgrass Rhizosphere	VRLVGMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLRTHLARKREADPRPVTA
Ga0207659_115497212	3300025926	Miscanthus Rhizosphere	MEEGCSPVRLVGMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLLTHLARKREADPRPVTA
Ga0207687_100736274	3300025927	Miscanthus Rhizosphere	MEEGCSPVRLVGMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPSTLSRLRTHLARKREADPRPVTA
Ga0207686_116277021	3300025934	Miscanthus Rhizosphere	YSPHSHLAIARARHEDMIRDADRARLARSFAEDKPGPLSRLWTHLARKREADPRPVTA
Ga0207670_112333972	3300025936	Switchgrass Rhizosphere	MEEGCSPVRLVGMNYSPHTHLTIARARHEDMLRDADRARLARSLDEDKPSTLSRLRTHLARKREADPRPVTA
Ga0207669_102997783	3300025937	Miscanthus Rhizosphere	MEEDSSPVRLVGMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPSTLSRLRTHLARKREADPRPVTA
Ga0207704_110201961	3300025938	Miscanthus Rhizosphere	HLAIARARHEDMLREAERTRLARSFKDERPSAFSRLRTYLARKREPEPRTVTA
Ga0207661_121642152	3300025944	Corn Rhizosphere	MNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLLTHLAR
Ga0207679_101758723	3300025945	Corn Rhizosphere	CSPVRLVGMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPSTLSRLRTHLARKREADPRPVTA
Ga0207679_101813771	3300025945	Corn Rhizosphere	MNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPSTLSRLRTHLAR
Ga0207651_106719502	3300025960	Switchgrass Rhizosphere	MEEGCSPVRLVGMNYSPHTHLTIARARHEDMLRDADRARLARSLDEDKLSTLSRLRTHLARKREADPRPVTA
Ga0207712_109900981	3300025961	Switchgrass Rhizosphere	EESWPLARPVGMYYSPHSHLAIARARHEDMLREAERTRLARSFEDERPSAFSRLRTYLARKREPEPRTVTA
Ga0207703_100486734	3300026035	Switchgrass Rhizosphere	MGMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPSTLSRLRTHLARKREADPRPVTA
Ga0207675_1002073223	3300026118	Switchgrass Rhizosphere	MEEDCSPVRLVGMNYSPHTHLTIARARHEDMLRDADSARLARSFDEDKPSTLSRLRTHLARKREADPRPVTA
Ga0207698_117997022	3300026142	Corn Rhizosphere	AREESWPLARPVGMYYSPHSHLAIARARHEDMLREAERTRLARSFEDERPSAFSRLRTYLARKREPEPRTVTA
Ga0209966_10254072	3300027695	Arabidopsis Thaliana Rhizosphere	SCPPARLVGMYYSPHSHLAIARARHEDMLREAERTRLARSFKDERPSAFSRLRTYLARKREPEPRTVTA
Ga0207428_100215056	3300027907	Populus Rhizosphere	MYYSPHTHLAIARARHEDMLRDADRARLARSFAEDKPGPLSRLWTHLARKREAGPRPVTA
Ga0307276_102195182	3300028705	Soil	MNYSPHSHLAIARARHEDMLRDAEHARLARSFGENKSGKLTRLWTHLTRKREAHPRPVTA
Ga0307291_10227752	3300028707	Soil	MYYSPHSHLAIARARHEDMLRDAEHARLARSFGENKSGKLTRLWTHLTRKREAHPRPVTA
Ga0307293_100031175	3300028711	Soil	ESCPPARLVGMYYSPHSHLAIARARHEDMIRDADRARLARSFAEDKPGPLSRLWTHLARKREADPRPVTA
Ga0307313_102126242	3300028715	Soil	REESCPPARLVGMYYSPHSHLAIARARHEDMIRDADRARLARSFAEDKPGPLSRLWTHLARKRAADPRPVTA
Ga0307301_100285243	3300028719	Soil	MDYSPHTHLAIARARHEDMLRDAERARLARSFDETKPGSLSRLWTHLARKRAADPRPVTA
Ga0307318_1000052513	3300028744	Soil	MYYSPHSHLAIARARHEDMIRDADRARLARSFAEDKPGPLSRLWTYLARKREADPRPVTA
Ga0307294_100959951	3300028810	Soil	IARARHEDMLRDAERARLARSFDETKPGSLSRLWTHLARKREADPRPVTA
Ga0307304_100302292	3300028885	Soil	MNYSPHSHLAIARARHEDMIRDADRARLARSFAEDKPGPLSRLWTHLARKREADPRPVTA
Ga0247826_116236442	3300030336	Soil	MYYSPHSHLAIARARHEDMIRDADRARLARSFAEDKPGPLSRLWTHLARKREVRPKARE
Ga0308197_104731691	3300031093	Soil	MYYSPHTHLALARARHEDMLRQADRARLPRSFQSERPGAFSRLWAHLARKRQAHPSPITI
Ga0307408_1001757384	3300031548	Rhizosphere	MYYSPHTHLAIARARHEDMLRDAERTRLARSFDEHKPGPLTRLWTHLAHKREADPRPVTA
Ga0307408_1002110073	3300031548	Rhizosphere	MYYSPHSHLAIARARHEDMLRDAERARLARSFDEEKPGMLSRLWTHLARKREADLRPVTA
Ga0307410_101516213	3300031852	Rhizosphere	MYYSPHSHLAIARARHEDMLRDAERARLARSFDEEKPGMLSRLWTHLARKREADLRPATA
Ga0307410_105151793	3300031852	Rhizosphere	MYYSPHTHLAIARARHEDMLRDAERARLARSFDEHKPGPLTRLWTHLAHKREADPRPVTA
Ga0310892_100681371	3300031858	Soil	EGCSPARPVSMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLLTHLARKREADPRPVTA
Ga0310892_109376922	3300031858	Soil	PHSHLAIARARHEDMLREAERTRLARSFENEQPSAFSRLRTYLARKREPQPRTVTA
Ga0307407_103167021	3300031903	Rhizosphere	MYYSPHSHLAIARARHEDMLRDAERARLAHSFGEDKPGMLSRLCTHLARKREADPRPVTA
Ga0310891_102792912	3300031913	Soil	MYYSPHTHLAIARARHEDMLRDADRARLARSFAEDKPGPLSRLWTHLARKREADPRPVTA
Ga0308175_1003067732	3300031938	Soil	MEEGCSPARPVGMNYSPHTHLTIARARHEDMLRDADRARLARSFDEDKPGTLSRLWTHLARKREADPRPVTA
Ga0310885_101817452	3300031943	Soil	MYYSPHTHLAIARARHEDMLRDADRARLARSFAEDKPGLLSRLWTHLARKREADPRPVTA
Ga0310903_106237172	3300032000	Soil	SPVGMYYSPHSHLAIARARHEDMLREAERTRLARSFENEQPSAFSRLRTYLARKREPQPRTVTA
Ga0307416_1005750453	3300032002	Rhizosphere	MYYSPHSHLAIARARHEDMLRDAERARLARSFDERKPGSLSRLWTHLAHKREADPRPVTA
Ga0310890_100944813	3300032075	Soil	MYYSPHSHLAIARARHEDMLREAERTRLARSFENEQPSAFSRLRTYLARKREPQPRTVTA
Ga0310889_105683682	3300032179	Soil	MYYSPHTHLAIARARHEDMLRDADRARLARSFAEDKPGLLSRLWTHLARKREAGPRPVTA
Ga0247829_100483601	3300033550	Soil	IARARHEDMLREAERTRLARSFKDERPSAFSRLRTYLARKREPEPRTVTA
Ga0314781_153999_284_466	3300034660	Soil	MYYSPHSHLAIARARHEDMLRDADRARLARSFAEDKPGPLSRLWTHLARKREAGPRPVTA
Ga0314793_166506_2_166	3300034668	Soil	SHLAIARARHEDMLREAERTRLARSFENEQPSAFSRLRTYLARKREPQPRTVTA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055259

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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