Metagenome Family F055340

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055340
Family Type	Metagenome
Number of Sequences	138
Average Sequence Length	46 residues
Representative Sequence	YSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKRP
Number of Associated Samples	69
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	5.07 %
% of genes near scaffold ends (potentially truncated)	93.48 %
% of genes from short scaffolds (< 2000 bps)	89.13 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (60.870 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.058 % of family members)
Environment Ontology (ENVO)	Unclassified (55.797 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.942 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.64% β-sheet: 0.00% Coil/Unstructured: 36.36%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF12849	PBP_like_2	2.90
PF15956	DUF4760	2.17
PF11026	DUF2721	1.45
PF00313	CSD	0.72
PF16640	Big_3_5	0.72
PF13676	TIR_2	0.72
PF00498	FHA	0.72
PF13181	TPR_8	0.72
PF14235	DUF4337	0.72
PF00999	Na_H_Exchanger	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	0.72
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	0.72
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	0.72
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	0.72
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.87 %
All Organisms	root	All Organisms	39.13 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.87 %
cellular organisms	root	All Organisms → cellular organisms	34.78 %
Viruses	superkingdom	All Organisms → Viruses	4.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.87 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.78 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.16 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.35 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.87 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	28.26 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.35 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.87 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	11.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.97 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.45 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.87 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	7.25 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.80 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	5.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.45 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	60.87 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.52 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	5.80 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	5.80 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	4.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.45 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10057858	Not Available	997	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10068451	Not Available	901	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10154751	Not Available	550	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10029583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1287	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10133206	Not Available	518	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1012177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1478	Open in IMG/M
3300004633\|Ga0066395_10161063	Not Available	1145	Open in IMG/M
3300005332\|Ga0066388_102045835	Not Available	1028	Open in IMG/M
3300005332\|Ga0066388_105765238	All Organisms → cellular organisms → Bacteria → Proteobacteria	626	Open in IMG/M
3300005332\|Ga0066388_108172299	Not Available	522	Open in IMG/M
3300005713\|Ga0066905_100425630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1084	Open in IMG/M
3300005713\|Ga0066905_100680769	Not Available	880	Open in IMG/M
3300005713\|Ga0066905_101568609	Not Available	601	Open in IMG/M
3300005764\|Ga0066903_100742199	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1741	Open in IMG/M
3300005764\|Ga0066903_102037508	All Organisms → cellular organisms → Bacteria → Proteobacteria	1103	Open in IMG/M
3300005764\|Ga0066903_102270869	Not Available	1047	Open in IMG/M
3300005764\|Ga0066903_102507679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	998	Open in IMG/M
3300005764\|Ga0066903_102637392	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300005764\|Ga0066903_103764062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	815	Open in IMG/M
3300005764\|Ga0066903_105286790	Not Available	682	Open in IMG/M
3300005764\|Ga0066903_105374287	Not Available	676	Open in IMG/M
3300005764\|Ga0066903_105787566	Not Available	649	Open in IMG/M
3300005764\|Ga0066903_106157758	Not Available	627	Open in IMG/M
3300005764\|Ga0066903_107052191	Not Available	582	Open in IMG/M
3300005764\|Ga0066903_107700632	Not Available	554	Open in IMG/M
3300005764\|Ga0066903_107727719	Not Available	553	Open in IMG/M
3300005764\|Ga0066903_108126987	Not Available	537	Open in IMG/M
3300010046\|Ga0126384_10335534	All Organisms → Viruses → Predicted Viral	1255	Open in IMG/M
3300010046\|Ga0126384_10414186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1141	Open in IMG/M
3300010046\|Ga0126384_11810772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300010046\|Ga0126384_12119545	Not Available	540	Open in IMG/M
3300010046\|Ga0126384_12150428	Not Available	536	Open in IMG/M
3300010047\|Ga0126382_10457043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1014	Open in IMG/M
3300010047\|Ga0126382_10900739	Not Available	765	Open in IMG/M
3300010048\|Ga0126373_10108311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2581	Open in IMG/M
3300010359\|Ga0126376_10341412	Not Available	1323	Open in IMG/M
3300010359\|Ga0126376_12521213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	562	Open in IMG/M
3300010359\|Ga0126376_12961800	Not Available	524	Open in IMG/M
3300010360\|Ga0126372_11453600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	720	Open in IMG/M
3300010361\|Ga0126378_11823810	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	692	Open in IMG/M
3300010366\|Ga0126379_11687533	Not Available	738	Open in IMG/M
3300010366\|Ga0126379_11794591	All Organisms → cellular organisms → Bacteria → Proteobacteria	717	Open in IMG/M
3300010366\|Ga0126379_12134816	Not Available	662	Open in IMG/M
3300010366\|Ga0126379_13306470	Not Available	540	Open in IMG/M
3300010376\|Ga0126381_100502584	All Organisms → cellular organisms → Bacteria	1710	Open in IMG/M
3300010376\|Ga0126381_102908979	Not Available	682	Open in IMG/M
3300010376\|Ga0126381_103519648	Not Available	615	Open in IMG/M
3300010376\|Ga0126381_104268024	Not Available	554	Open in IMG/M
3300010376\|Ga0126381_104980508	Not Available	509	Open in IMG/M
3300010398\|Ga0126383_10069654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3019	Open in IMG/M
3300010398\|Ga0126383_10987124	Not Available	930	Open in IMG/M
3300010398\|Ga0126383_12392856	Not Available	613	Open in IMG/M
3300012971\|Ga0126369_10028683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4558	Open in IMG/M
3300012971\|Ga0126369_10162099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2116	Open in IMG/M
3300012971\|Ga0126369_11065118	Not Available	897	Open in IMG/M
3300012971\|Ga0126369_12113779	Not Available	651	Open in IMG/M
3300012971\|Ga0126369_12821452	Not Available	569	Open in IMG/M
3300015371\|Ga0132258_10153508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5527	Open in IMG/M
3300015374\|Ga0132255_101672755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	965	Open in IMG/M
3300016270\|Ga0182036_10054990	Not Available	2521	Open in IMG/M
3300016270\|Ga0182036_10434726	Not Available	1029	Open in IMG/M
3300016270\|Ga0182036_11340975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	598	Open in IMG/M
3300016294\|Ga0182041_10340783	Not Available	1257	Open in IMG/M
3300016341\|Ga0182035_10434333	Not Available	1110	Open in IMG/M
3300016357\|Ga0182032_10340603	All Organisms → Viruses → Predicted Viral	1197	Open in IMG/M
3300016404\|Ga0182037_11569696	Not Available	585	Open in IMG/M
3300016404\|Ga0182037_12068437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	512	Open in IMG/M
3300016445\|Ga0182038_10032146	Not Available	3318	Open in IMG/M
3300016445\|Ga0182038_10399751	Not Available	1151	Open in IMG/M
3300020582\|Ga0210395_11228464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	550	Open in IMG/M
3300021178\|Ga0210408_10238348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1448	Open in IMG/M
3300031544\|Ga0318534_10231968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1065	Open in IMG/M
3300031545\|Ga0318541_10171913	Not Available	1194	Open in IMG/M
3300031545\|Ga0318541_10759231	Not Available	541	Open in IMG/M
3300031546\|Ga0318538_10838157	Not Available	500	Open in IMG/M
3300031561\|Ga0318528_10739035	Not Available	526	Open in IMG/M
3300031573\|Ga0310915_10177362	All Organisms → cellular organisms → Bacteria	1483	Open in IMG/M
3300031573\|Ga0310915_10292823	All Organisms → Viruses → Predicted Viral	1149	Open in IMG/M
3300031682\|Ga0318560_10338201	Not Available	812	Open in IMG/M
3300031719\|Ga0306917_11216589	Not Available	584	Open in IMG/M
3300031724\|Ga0318500_10052776	Not Available	1732	Open in IMG/M
3300031724\|Ga0318500_10184743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	994	Open in IMG/M
3300031736\|Ga0318501_10192296	Not Available	1065	Open in IMG/M
3300031736\|Ga0318501_10319840	Not Available	830	Open in IMG/M
3300031744\|Ga0306918_10842500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	715	Open in IMG/M
3300031747\|Ga0318502_10982696	Not Available	514	Open in IMG/M
3300031764\|Ga0318535_10207376	Not Available	877	Open in IMG/M
3300031768\|Ga0318509_10385279	Not Available	784	Open in IMG/M
3300031781\|Ga0318547_10428641	Not Available	813	Open in IMG/M
3300031781\|Ga0318547_10598534	Not Available	684	Open in IMG/M
3300031796\|Ga0318576_10363572	Not Available	684	Open in IMG/M
3300031798\|Ga0318523_10084335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1542	Open in IMG/M
3300031798\|Ga0318523_10566384	Not Available	560	Open in IMG/M
3300031805\|Ga0318497_10244353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	995	Open in IMG/M
3300031832\|Ga0318499_10215842	Not Available	747	Open in IMG/M
3300031835\|Ga0318517_10198148	Not Available	904	Open in IMG/M
3300031845\|Ga0318511_10128227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1097	Open in IMG/M
3300031879\|Ga0306919_10030120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3411	Open in IMG/M
3300031879\|Ga0306919_10404583	All Organisms → Viruses → Predicted Viral	1047	Open in IMG/M
3300031890\|Ga0306925_10118559	Not Available	2830	Open in IMG/M
3300031890\|Ga0306925_10350912	Not Available	1584	Open in IMG/M
3300031896\|Ga0318551_10423153	Not Available	759	Open in IMG/M
3300031910\|Ga0306923_10140583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2751	Open in IMG/M
3300031910\|Ga0306923_11044259	Not Available	884	Open in IMG/M
3300031910\|Ga0306923_11606741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	675	Open in IMG/M
3300031912\|Ga0306921_10396880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1610	Open in IMG/M
3300031912\|Ga0306921_10898037	All Organisms → Viruses → Predicted Viral	1006	Open in IMG/M
3300031941\|Ga0310912_11416941	Not Available	524	Open in IMG/M
3300031942\|Ga0310916_10503658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1031	Open in IMG/M
3300031946\|Ga0310910_10191891	All Organisms → Viruses → Predicted Viral	1582	Open in IMG/M
3300031946\|Ga0310910_10374670	Not Available	1126	Open in IMG/M
3300031947\|Ga0310909_10078009	Not Available	2619	Open in IMG/M
3300031947\|Ga0310909_10136272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2006	Open in IMG/M
3300031947\|Ga0310909_10412904	Not Available	1133	Open in IMG/M
3300031947\|Ga0310909_11600600	Not Available	516	Open in IMG/M
3300031954\|Ga0306926_10749427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1181	Open in IMG/M
3300031954\|Ga0306926_10949357	Not Available	1027	Open in IMG/M
3300031954\|Ga0306926_12648631	Not Available	546	Open in IMG/M
3300031959\|Ga0318530_10019866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2296	Open in IMG/M
3300031959\|Ga0318530_10189344	Not Available	842	Open in IMG/M
3300031981\|Ga0318531_10231646	Not Available	833	Open in IMG/M
3300031981\|Ga0318531_10381615	Not Available	638	Open in IMG/M
3300032001\|Ga0306922_10077133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3494	Open in IMG/M
3300032001\|Ga0306922_11939799	Not Available	575	Open in IMG/M
3300032039\|Ga0318559_10523309	Not Available	553	Open in IMG/M
3300032043\|Ga0318556_10362689	Not Available	758	Open in IMG/M
3300032044\|Ga0318558_10280209	Not Available	823	Open in IMG/M
3300032051\|Ga0318532_10370644	Not Available	508	Open in IMG/M
3300032060\|Ga0318505_10384581	Not Available	663	Open in IMG/M
3300032076\|Ga0306924_10219954	All Organisms → cellular organisms → Bacteria → Proteobacteria	2181	Open in IMG/M
3300032076\|Ga0306924_10366727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1650	Open in IMG/M
3300032076\|Ga0306924_10507283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1373	Open in IMG/M
3300032076\|Ga0306924_10602533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1243	Open in IMG/M
3300032076\|Ga0306924_10671181	Not Available	1166	Open in IMG/M
3300032089\|Ga0318525_10284444	Not Available	849	Open in IMG/M
3300032261\|Ga0306920_102035192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	803	Open in IMG/M
3300033289\|Ga0310914_10472780	Not Available	1134	Open in IMG/M
3300033289\|Ga0310914_10518725	Not Available	1077	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.55%
Host-Associated	Host-Associated	1.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.55%
Plants	Host-Associated → Plants	1.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.55%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.33%
Loam	Environmental → Terrestrial → Soil → Loam	15.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.45%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	61.59%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	21.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.22%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.35%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.45%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100578581	3300000597	Forest Soil	AFICYSEIKSHAEVPWAKLEMYATIAFGIPLAVLILGWAFLGAAAKRP*
AF_2010_repII_A1DRAFT_100684512	3300000597	Forest Soil	AFICYSEIKSHAEVPWPKLEMCATIAFGIPLVVLILGWAFLGSAAKD*
AF_2010_repII_A1DRAFT_101547513	3300000597	Forest Soil	FICYSEIKSHAEVPWAKLEMCATIAFGIPLVVLIPGWAFLGSAAKRP*
AF_2010_repII_A001DRAFT_100295831	3300000793	Forest Soil	ICYSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAXRP*
AF_2010_repII_A001DRAFT_101332061	3300000793	Forest Soil	SEIKSHAEVPWAKLEMCATIAFGIPLVVLIPGWAFLGSAAKRP*
AP72_2010_repI_A001DRAFT_10121773	3300000893	Forest Soil	AEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKRS*
Ga0066395_101610631	3300004633	Tropical Forest Soil	CYSEIKSYAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKRP*
Ga0066388_1020458354	3300005332	Tropical Forest Soil	EIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAANRS*
Ga0066388_1057652381	3300005332	Tropical Forest Soil	KSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAERS*
Ga0066388_1081722991	3300005332	Tropical Forest Soil	VIAVAFICYSEIKSHAEVPAAKLEMCATIAFGFPLVVLILGWAFSGSAAKRS*
Ga0066905_1004256304	3300005713	Tropical Forest Soil	SEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKRS*
Ga0066905_1006807692	3300005713	Tropical Forest Soil	EIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKRP*
Ga0066905_1015686091	3300005713	Tropical Forest Soil	VIAIAFISYGEIKSADGGPNPWAALEMWAIVAFGIPLVVLILG
Ga0066903_1007421994	3300005764	Tropical Forest Soil	VPWAKLEMCATIAFGIPLLVLILGWAFLGSAAKQP*
Ga0066903_1020375081	3300005764	Tropical Forest Soil	AEVPWPKLEMCATIAFGIPLVVLILGWAFLGSAAKD*
Ga0066903_1022708693	3300005764	Tropical Forest Soil	AHAEVPWAKLEMCAAIAFGIPLVILILGWAFLGSAAKQPWKN*
Ga0066903_1025076791	3300005764	Tropical Forest Soil	EVPWAKLEMCATIAFGIPLAVLILGWAFLGSAAERS*
Ga0066903_1026373922	3300005764	Tropical Forest Soil	EVPWAKLEMCATIAFGFPLVVLILGWAFLGSAAKQP*
Ga0066903_1037640622	3300005764	Tropical Forest Soil	MFVIAVAFICYSEIKSHAEVPWAKLEMCAAIAFGIPLVVLILGWAFLGSDAKRS*
Ga0066903_1052867901	3300005764	Tropical Forest Soil	VIAIAFICYSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWA
Ga0066903_1053742872	3300005764	Tropical Forest Soil	EIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAANRP*
Ga0066903_1057875661	3300005764	Tropical Forest Soil	LFVIAVAFICYSEIKSHAEVPWAKLEMCATIAFGIPLVVPILGWAFLGSAAKRS*
Ga0066903_1061577581	3300005764	Tropical Forest Soil	IKAHAEVPWAKLEMCATIAFGFPLVVLILGWAFLGSAAKQA*
Ga0066903_1070521911	3300005764	Tropical Forest Soil	KSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKRS*
Ga0066903_1077006322	3300005764	Tropical Forest Soil	SADGGQIPWATLEMRAIIAFGIPLVVLILGWAFFGSAAKRP*
Ga0066903_1077277191	3300005764	Tropical Forest Soil	AHAEVPWAKLEMCAAIAFGIPLVILILGWAFLGSAAKQP*
Ga0066903_1081269871	3300005764	Tropical Forest Soil	EIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKTD*
Ga0126384_103355343	3300010046	Tropical Forest Soil	FICYSEIKSHAEVPWAKLEMCAAIAFGIPLVVLILGWAFLGSTAKRS*
Ga0126384_104141863	3300010046	Tropical Forest Soil	AEVPWARLEMCATIAFGIPLVVLILGWAFLGSAANRP*
Ga0126384_118107722	3300010046	Tropical Forest Soil	VIAVAFICYSEIKSYAEVPWARLEMCATIAFGIPLVVLILGWAFLGSAAERP*
Ga0126384_121195452	3300010046	Tropical Forest Soil	FVIAVAFICYSEIKSHAEVPWAKLEMCAAIAFGIPLVVLILGWAFLGSDAKRS*
Ga0126384_121504282	3300010046	Tropical Forest Soil	HAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKQP*
Ga0126382_104570433	3300010047	Tropical Forest Soil	IAVAFICYSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKRS*
Ga0126382_109007391	3300010047	Tropical Forest Soil	EIKSYAEVPWPKLEMCATIAFGIPLVVLILGWALLGSDAKRS*
Ga0126373_101083114	3300010048	Tropical Forest Soil	MFVIAVAFICYSEIKSHAEVPWAKLEMCAAIAFDIPLVVLILGWAFLGSDAKRS*
Ga0126376_103414123	3300010359	Tropical Forest Soil	LFVVAVAFICYSKIKSYAEVPWGKLEMCATIAFGIPLVVLILG
Ga0126376_125212131	3300010359	Tropical Forest Soil	EIKSYAEVPWPRLEMCATIAFGIPLVVLILGWAFLGSAAKRP*
Ga0126376_129618002	3300010359	Tropical Forest Soil	FVIAVAFICYSEIKSHAEVPWTKLEMCVTIAFGIPLVVLILGWAFLGSAAKRP*
Ga0126372_114536002	3300010360	Tropical Forest Soil	MFVIAVAFICYSEIKSHAEVPWAKLEMCAAIAFGIPLVVLILGWAFLGSAAERS*
Ga0126378_118238101	3300010361	Tropical Forest Soil	YAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAERP*
Ga0126379_116875332	3300010366	Tropical Forest Soil	AFVCYSEIKSYAEVPWAKLEMCATIAFGIPLVVLNLGWAFLGSAAKQP*
Ga0126379_117945911	3300010366	Tropical Forest Soil	IKSYAEVPWPKLEMCATIAFGIPLVVLILGWAFLGSAAKD*
Ga0126379_121348161	3300010366	Tropical Forest Soil	KSHAEVPWAKLEMCATIAFGIPLVVLILGWALLGSVTD*
Ga0126379_133064702	3300010366	Tropical Forest Soil	VAFICYSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAANRP*
Ga0126381_1005025841	3300010376	Tropical Forest Soil	EIKAHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKQP*
Ga0126381_1029089791	3300010376	Tropical Forest Soil	ALFVIAVAFICYSEIKSYAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKQP*
Ga0126381_1035196481	3300010376	Tropical Forest Soil	AFVCYSEIKSYAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAERP*
Ga0126381_1042680242	3300010376	Tropical Forest Soil	FVIAVAFICYSEIKSHAEVPWPKLEMCATIAFSIPLVVLILGWALLGSAAKRP*
Ga0126381_1049805082	3300010376	Tropical Forest Soil	FVIAVAFICYSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFSGFAAKRP*
Ga0126383_100696541	3300010398	Tropical Forest Soil	IKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKRS*
Ga0126383_109871242	3300010398	Tropical Forest Soil	FVIAVAFICYSEIKSHAEVPWAKLEMCAAIAFDIPLVVLILGWAFLGSDAKRS*
Ga0126383_123928561	3300010398	Tropical Forest Soil	AEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAGERP*
Ga0126369_1002868310	3300012971	Tropical Forest Soil	CYSEIKSYAEVPWAKLEMCATIAFGIPLVVLNLGWAFLGSAAKQP*
Ga0126369_101620991	3300012971	Tropical Forest Soil	VPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKQP*
Ga0126369_110651181	3300012971	Tropical Forest Soil	EIKSHAEVPWAKLEMCAAIAFGIPLVVLILGWAFLGSDAKRS*
Ga0126369_121137791	3300012971	Tropical Forest Soil	ALICYSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKRP*
Ga0126369_128214522	3300012971	Tropical Forest Soil	AFICYSEIKSYAEVPWAKLEMCATIAFGIPLVVLILGWGFLGSAAERS*
Ga0132258_101535087	3300015371	Arabidopsis Rhizosphere	VFAVAFICYSEIKPHAEIPWATLEMCATIAFGIPLVVLLLGWASLGSAVKRS*
Ga0132255_1016727551	3300015374	Arabidopsis Rhizosphere	YSEIKPDAEIPWATLEMCATIAFGIPLVVLLLGWASLGSAVKRS*
Ga0182036_100549904	3300016270	Soil	FVIAVAFICYSEIKSHAEVPWAKLEMCATIAFGIPLLVLILGWAFLGSAAKQP
Ga0182036_104347261	3300016270	Soil	LFVIAVAFICYSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKRP
Ga0182036_113409751	3300016270	Soil	KSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKRP
Ga0182041_103407833	3300016294	Soil	LFVIAVAFICYSEIKSYAEVPWAKLEMCATIAFGIPLVVLILGWGFLGSAAKQP
Ga0182035_104343332	3300016341	Soil	VGSSGCGLLAQLLFVIAVAFICYSEIRSHAEVPWPKLEMCATIAFGIPLAVLILGWAFLGSAAKPP
Ga0182032_103406031	3300016357	Soil	LFVIAVAFICYSEIKSYAEVPWARLEMCATIAFGIPLLVLILGWAFLGSVTD
Ga0182037_115696961	3300016404	Soil	LFVIAVAFVCYSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAERS
Ga0182037_120684371	3300016404	Soil	KSYAEVPWARLEMCATIAFGILLLVLILGWAFLGSVTD
Ga0182038_100321466	3300016445	Soil	FICYSEIKSHAEVPWAKLEMCTTIAFGIPLVVLILGWAFLGSVTD
Ga0182038_103997511	3300016445	Soil	LAQLLFVIAVAFICYSEIRSHAEVPWPKLEMCATIAFGIPLAVLILGWAFLGSAAKPP
Ga0210395_112284641	3300020582	Soil	KAHAEVPWATLEMCAIIAFGFPLVVLILGWAFLGSAAKQS
Ga0210408_102383482	3300021178	Soil	VIAVAFICYNDIKAHAEVPWATLEMCAIIAFGFPLVVLILGWAFLGSAAKQS
Ga0318534_102319681	3300031544	Soil	YSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKRP
Ga0318541_101719131	3300031545	Soil	SALFVIAVAFICYSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSVTD
Ga0318541_107592311	3300031545	Soil	VIAVALICYSESKSHAEVPWAKLEMCTTIAFGIPLVVLVLGWAFLGSAAKQS
Ga0318538_108381572	3300031546	Soil	VIAVAFICYSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSVTD
Ga0318528_107390351	3300031561	Soil	FVIAVAFICYSEIKSYAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKRP
Ga0310915_101773621	3300031573	Soil	HAEVPWAKLEMCTTIAFGIPLVVLVLGWAFLGSAAKQS
Ga0310915_102928232	3300031573	Soil	GSALFVIAVAFICYSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSVTD
Ga0318560_103382011	3300031682	Soil	TALFVLAVAFICYSEIKSYAEVPWPRLEMCATIAFGIPLVVLILGWAFLGSAAKRS
Ga0306917_112165891	3300031719	Soil	AFICYSEIKSYAEVPWPRLEMCATIAFGIPLVVLILGWAFLGSAAKRS
Ga0318500_100527761	3300031724	Soil	SALFVIAVAFICYSEIKSHAEVPWAKLEMCATIAFGIPLLVLILGWAVLGSAAKQP
Ga0318500_101847433	3300031724	Soil	IKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAANRP
Ga0318501_101922963	3300031736	Soil	SHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKRP
Ga0318501_103198401	3300031736	Soil	FVIAVAFICYSEIKSYAEVPWPKLEMCATIAFGFPLVVLILGWAFLGSAAKQP
Ga0306918_108425001	3300031744	Soil	SEIKSHAEVPWPKLEMCATIAFGIPLVVLILGWAFLGSAAKQP
Ga0318502_109826961	3300031747	Soil	SYAEVPWPRLEMCATIAFGIPLVVLILGWAFLGSAAKRS
Ga0318535_102073761	3300031764	Soil	AEVPWATLEMCATIAFGIPLVVLILGWAFLGSAANRP
Ga0318509_103852792	3300031768	Soil	EVPWATLEMCAIIAFGFPLVVLILGWAFLGSAAKQP
Ga0318547_104286411	3300031781	Soil	AFICYSEIKSHAEVPWAKLEMCATIAFGIPLLVLILGWAFLGSAAKQP
Ga0318547_105985342	3300031781	Soil	VPWAKLEMCATIAFGVPLVVLILGWAFLGSAAERS
Ga0318576_103635722	3300031796	Soil	HAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKRP
Ga0318523_100843351	3300031798	Soil	YSEIKSYAEVPWARLEMCATIAFGIPLVVLILGWAFLGSAAERP
Ga0318523_105663842	3300031798	Soil	ICYSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSVTD
Ga0318497_102443532	3300031805	Soil	YAEVPWPKLEMCATIAFGFPLVVLILGWAFLGSAAKQP
Ga0318499_102158421	3300031832	Soil	FVIAVAFICYSEIKSHAEVPWAKLEMCATIAFGIPLLVLILGWAFLGSVTD
Ga0318517_101981481	3300031835	Soil	FVIAVAFICYNDIKAHAEVPWATLEMCAIIAFGFPLVVLILGWAFLGSAAKQP
Ga0318511_101282273	3300031845	Soil	FVIAVAFICYSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSVTD
Ga0306919_100301209	3300031879	Soil	SYAEVPWARLEMCATIAFGIPLVVLILGWAFLGSAAERP
Ga0306919_104045831	3300031879	Soil	EVPWAKLEMCATIAFGIPLVVLILGWAFLGSAANRP
Ga0306925_101185591	3300031890	Soil	IAVAFICYSEIKSHAEVPWAKLEMCATIAFGIPLLVLILGWAFLGSAAKQP
Ga0306925_103509123	3300031890	Soil	VAFICYSEIKSHAEVPWPRLEMCATIAFGIPLVVLILGWAFLGSAAKRS
Ga0318551_104231532	3300031896	Soil	YSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSVTD
Ga0306923_101405831	3300031910	Soil	IPWAKLEVCATIAFGIPLVVLILGWAFLGSAANRP
Ga0306923_110442591	3300031910	Soil	AVAFICYSEIKSHAEVPWAKLEMCATIAFGIPLLVLILGWAFLGSAAKQP
Ga0306923_116067411	3300031910	Soil	AFVSYSEIKSAGGGPIPWATLEMWATIAFGIPLVVLILGWAFFGSAAKRP
Ga0306921_103968801	3300031912	Soil	IKSYAEVPWPRLEMCATIAFGIPLVVLILGWAFLGSAAKRS
Ga0306921_108980373	3300031912	Soil	VPWAKLEMCATIAFGIPLVVLILGWAFLGSAANRP
Ga0310912_114169411	3300031941	Soil	LFVIAVAFICYSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSVTD
Ga0310916_105036584	3300031942	Soil	CYSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKRS
Ga0310910_101918913	3300031946	Soil	YSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAANRP
Ga0310910_103746702	3300031946	Soil	ICYSEIKSHAEVSWAKLEMCATIAFGIPLVVLILGWAFLGSVTD
Ga0310909_100780095	3300031947	Soil	ALFVIAVAFICYSEIKSHAEVPWAKLEMCATIAFGIPLLVLILGWAFLGSAAKQP
Ga0310909_101362725	3300031947	Soil	YNDTKAHAEVPWATLEICATIAFGFPLVVLILGWAFLGSAAKQP
Ga0310909_104129041	3300031947	Soil	SEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSVTD
Ga0310909_116006002	3300031947	Soil	AEVPWARLEMCATIAFGIPLVVLILGWAFLGSAAERP
Ga0306926_107494273	3300031954	Soil	SESKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAERS
Ga0306926_109493572	3300031954	Soil	LAQLLFVIAVAFICYSEIRSHAEVPWPKLEMCATIAFGIPLAVLILGWAFL
Ga0306926_126486312	3300031954	Soil	AVAFVSYSEIKSHAEVPWAKLEMCTTIAFGIPLVVLILGWAFLGSVTD
Ga0318530_100198666	3300031959	Soil	IKSYAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKRP
Ga0318530_101893441	3300031959	Soil	FICYNDIKAHAEVPWATLEMCAIIAFGFPLVVLILGWAFLGSAAKQP
Ga0318531_102316462	3300031981	Soil	GSALFVIAVAFICYSEIKSHAEVPWAKLEMCATIAFGIPLLVLILGWAFLGSVTD
Ga0318531_103816152	3300031981	Soil	SALFVIAVAFICYSEIKSYAEVPWPKLEMCATIAFGFPLVVLILGWAFLGSAAKQP
Ga0306922_100771331	3300032001	Soil	EVPWATLEICATIAFGFPLVVLILGWAFLGSAAKQP
Ga0306922_119397991	3300032001	Soil	LFVLAVAFICYSEIKSYAEVPWAKLEMCATIAFGIPLVVLILGWGFLGSAAKQP
Ga0318559_105233091	3300032039	Soil	VAFICYNDIKAHAEVPWATLEMCAIIAFGFPLVVLILGWAFLGSAAKQP
Ga0318556_103626892	3300032043	Soil	NDIKAHAEVPWATLEMCAIIAFGFPLVVLILGWAFLGSAAKQP
Ga0318558_102802091	3300032044	Soil	YAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSVTD
Ga0318532_103706441	3300032051	Soil	VGSALFVIAVAFICYSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSVTD
Ga0318505_103845812	3300032060	Soil	SALFVIAVAFICYSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKRP
Ga0306924_102199543	3300032076	Soil	YSESKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAERS
Ga0306924_103667274	3300032076	Soil	IKTHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKRP
Ga0306924_105072831	3300032076	Soil	VIAVAFICYSEIKSHAEVPWAKLEMCAAIAFGIPLVILILGWAFLGSAAKQP
Ga0306924_106025331	3300032076	Soil	AFVCYSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKRS
Ga0306924_106711811	3300032076	Soil	VAFICYSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSVTD
Ga0318525_102844442	3300032089	Soil	AEVPSATLEMCAIIAFGFPLVVLILGWAFLGSAAKQP
Ga0306920_1020351922	3300032261	Soil	SEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSAAKRP
Ga0310914_104727802	3300033289	Soil	AFICYSEIKSHAEVPWAKLEMCATIAFGIPLVVLILGWAFLGSVTD
Ga0310914_105187251	3300033289	Soil	IAVAFICYSEIKSHAEVPWAKLEMCAAIAFGIPLVILILGWAFLGSAAKQP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F055340

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences