Metagenome Family F055431

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055431
Family Type	Metagenome
Number of Sequences	138
Average Sequence Length	69 residues
Representative Sequence	MKVITHKQMKLAIEHLAGLLKKDGASQTLTVQEWLDAAQFRPAQFPSSLAALEILGLLGFGDEMVQPETLG
Number of Associated Samples	106
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	27.01 %
% of genes near scaffold ends (potentially truncated)	30.43 %
% of genes from short scaffolds (< 2000 bps)	76.09 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.710 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (12.319 % of family members)
Environment Ontology (ENVO)	Unclassified (39.130 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (30.435 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.42% β-sheet: 4.04% Coil/Unstructured: 53.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.26.1.1: Long-chain cytokines	d1bgca_	1bgc	0.63003
a.29.6.1: Plant invertase/pectin methylesterase inhibitor	d1x91a_	1x91	0.62271
a.29.16.1: IVS-encoded protein-like	d2rlda1	2rld	0.6193
a.29.6.0: automated matches	d1xg2b1	1xg2	0.60851
a.25.1.1: Ferritin	d1zuja1	1zuj	0.60656

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF01713	Smr	4.35
PF00583	Acetyltransf_1	3.62
PF07963	N_methyl	2.90
PF00196	GerE	1.45
PF00005	ABC_tran	1.45
PF00482	T2SSF	1.45
PF00884	Sulfatase	1.45
PF01370	Epimerase	1.45
PF00072	Response_reg	0.72
PF00106	adh_short	0.72
PF10543	ORF6N	0.72
PF04255	DUF433	0.72
PF13306	LRR_5	0.72
PF00730	HhH-GPD	0.72
PF13191	AAA_16	0.72
PF13426	PAS_9	0.72
PF01564	Spermine_synth	0.72
PF00581	Rhodanese	0.72
PF06968	BATS	0.72
PF04055	Radical_SAM	0.72
PF01116	F_bP_aldolase	0.72
PF01975	SurE	0.72
PF06764	DUF1223	0.72
PF07859	Abhydrolase_3	0.72
PF00696	AA_kinase	0.72
PF00578	AhpC-TSA	0.72
PF08532	Glyco_hydro_42M	0.72
PF02705	K_trans	0.72
PF11175	DUF2961	0.72
PF01435	Peptidase_M48	0.72
PF03150	CCP_MauG	0.72
PF02836	Glyco_hydro_2_C	0.72
PF14559	TPR_19	0.72
PF07929	PRiA4_ORF3	0.72
PF00722	Glyco_hydro_16	0.72
PF06685	DUF1186	0.72
PF01408	GFO_IDH_MocA	0.72
PF00754	F5_F8_type_C	0.72
PF01381	HTH_3	0.72
PF10114	PocR	0.72
PF13229	Beta_helix	0.72
PF12801	Fer4_5	0.72
PF00079	Serpin	0.72
PF05157	T2SSE_N	0.72
PF10502	Peptidase_S26	0.72
PF00083	Sugar_tr	0.72
PF13638	PIN_4	0.72
PF00216	Bac_DNA_binding	0.72
PF04734	Ceramidase_alk	0.72
PF16401	DUF5009	0.72
PF00717	Peptidase_S24	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.72
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.72
COG0191	Fructose/tagatose bisphosphate aldolase	Carbohydrate transport and metabolism [G]	0.72
COG0496	Broad specificity polyphosphatase and 5'/3'-nucleotidase SurE	Replication, recombination and repair [L]	0.72
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.72
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.72
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.72
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.72
COG1858	Cytochrome c peroxidase	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG1874	Beta-galactosidase GanA	Carbohydrate transport and metabolism [G]	0.72
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.72
COG2273	Beta-glucanase, GH16 family	Carbohydrate transport and metabolism [G]	0.72
COG2442	Predicted antitoxin component of a toxin-antitoxin system, DUF433 family	Defense mechanisms [V]	0.72
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.72
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	0.72
COG4826	Serine protease inhibitor	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG5429	Uncharacterized conserved protein, DUF1223 domain	Function unknown [S]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.71 %
Unclassified	root	N/A	20.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.71 %
Unclassified	root	N/A	20.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.71 %
Unclassified	root	N/A	20.29 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	59.42 %
Unclassified	root	N/A	20.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.45 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.72 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	57.97 %
Unclassified	root	N/A	20.29 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.72 %
Candidatus Latescibacteria	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria	0.72 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.29 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	6.52 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	5.07 %
unclassified Candidatus Latescibacteria	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria	0.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.72 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.72 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.29 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	6.52 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.07 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.72 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.72 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.72 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.29 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.07 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	3.62 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.72 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.72 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.72 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	0.72 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.29 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.07 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	2.17 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	1.45 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.72 %
Geminisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Geminisphaera	0.72 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.72 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.72 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.29 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.07 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2.17 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	1.45 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.72 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	0.72 %
Geminisphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Geminisphaera	0.72 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.72 %
Candidatus Latescibacteria bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_102624298	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	971	Open in IMG/M
3300001213\|JGIcombinedJ13530_106662346	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1001	Open in IMG/M
3300001213\|JGIcombinedJ13530_107403584	Not Available	856	Open in IMG/M
3300003432\|JGI20214J51088_10382019	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300003541\|JGI20214J51650_11194677	Not Available	528	Open in IMG/M
3300003852\|Ga0031655_10258037	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	654	Open in IMG/M
3300004015\|Ga0055462_10164848	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	687	Open in IMG/M
3300004080\|Ga0062385_10678710	Not Available	661	Open in IMG/M
3300004092\|Ga0062389_101188428	Not Available	948	Open in IMG/M
3300004775\|Ga0007798_10021822	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300005332\|Ga0066388_101273123	Not Available	1265	Open in IMG/M
3300005332\|Ga0066388_102470574	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	944	Open in IMG/M
3300005436\|Ga0070713_100151668	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	2062	Open in IMG/M
3300005831\|Ga0074471_10895163	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1176	Open in IMG/M
3300007775\|Ga0102953_1026608	All Organisms → cellular organisms → Bacteria	2694	Open in IMG/M
3300009502\|Ga0114951_10100270	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1648	Open in IMG/M
3300009520\|Ga0116214_1199504	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300009548\|Ga0116107_1032975	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1897	Open in IMG/M
3300009618\|Ga0116127_1098784	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	769	Open in IMG/M
3300009629\|Ga0116119_1174854	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	535	Open in IMG/M
3300009630\|Ga0116114_1001017	All Organisms → cellular organisms → Bacteria	15886	Open in IMG/M
3300009632\|Ga0116102_1094261	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300009640\|Ga0116126_1132346	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	853	Open in IMG/M
3300009640\|Ga0116126_1197266	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	650	Open in IMG/M
3300009640\|Ga0116126_1235590	Not Available	578	Open in IMG/M
3300009683\|Ga0116224_10634202	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	511	Open in IMG/M
3300009760\|Ga0116131_1054688	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1277	Open in IMG/M
3300009824\|Ga0116219_10222605	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1076	Open in IMG/M
3300010047\|Ga0126382_11512421	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	618	Open in IMG/M
3300010339\|Ga0074046_10231527	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1152	Open in IMG/M
3300010361\|Ga0126378_12753292	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	562	Open in IMG/M
3300010366\|Ga0126379_13652532	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	515	Open in IMG/M
3300010379\|Ga0136449_101917382	Not Available	880	Open in IMG/M
3300010398\|Ga0126383_11255035	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	831	Open in IMG/M
3300010413\|Ga0136851_10052860	All Organisms → cellular organisms → Bacteria → Proteobacteria	4423	Open in IMG/M
3300011444\|Ga0137463_1092268	All Organisms → cellular organisms → Bacteria	1138	Open in IMG/M
3300012202\|Ga0137363_10877342	Not Available	761	Open in IMG/M
3300012205\|Ga0137362_10811561	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	801	Open in IMG/M
3300012212\|Ga0150985_106710451	All Organisms → cellular organisms → Bacteria → PVC group	797	Open in IMG/M
3300012923\|Ga0137359_10178045	All Organisms → cellular organisms → Bacteria	1898	Open in IMG/M
3300012923\|Ga0137359_10726241	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	864	Open in IMG/M
3300012929\|Ga0137404_12231328	Not Available	512	Open in IMG/M
3300012971\|Ga0126369_11177438	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	856	Open in IMG/M
3300014151\|Ga0181539_1025543	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	3177	Open in IMG/M
3300014151\|Ga0181539_1075921	Not Available	1477	Open in IMG/M
3300014151\|Ga0181539_1114035	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1119	Open in IMG/M
3300014156\|Ga0181518_10018659	All Organisms → cellular organisms → Bacteria	4872	Open in IMG/M
3300014158\|Ga0181521_10067883	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2337	Open in IMG/M
3300014160\|Ga0181517_10032965	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3350	Open in IMG/M
3300014161\|Ga0181529_10000187	All Organisms → cellular organisms → Bacteria	90741	Open in IMG/M
3300014490\|Ga0182010_10461488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	698	Open in IMG/M
3300014490\|Ga0182010_10830483	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	525	Open in IMG/M
3300014491\|Ga0182014_10003569	All Organisms → cellular organisms → Bacteria	18515	Open in IMG/M
3300014491\|Ga0182014_10330678	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	774	Open in IMG/M
3300014494\|Ga0182017_10466904	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300014498\|Ga0182019_10258102	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1149	Open in IMG/M
3300014498\|Ga0182019_10337975	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1013	Open in IMG/M
3300014498\|Ga0182019_10452391	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	883	Open in IMG/M
3300014498\|Ga0182019_10454720	Not Available	881	Open in IMG/M
3300014498\|Ga0182019_10738075	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	700	Open in IMG/M
3300014502\|Ga0182021_10793357	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1137	Open in IMG/M
3300014502\|Ga0182021_11874778	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	722	Open in IMG/M
3300014502\|Ga0182021_12408767	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	633	Open in IMG/M
3300014502\|Ga0182021_12776700	Not Available	588	Open in IMG/M
3300014502\|Ga0182021_12981265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	567	Open in IMG/M
3300014502\|Ga0182021_13742524	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	505	Open in IMG/M
3300014638\|Ga0181536_10329987	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	700	Open in IMG/M
3300014839\|Ga0182027_10894561	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	919	Open in IMG/M
3300014969\|Ga0157376_10555628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1137	Open in IMG/M
3300017925\|Ga0187856_1020368	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3404	Open in IMG/M
3300017929\|Ga0187849_1033454	All Organisms → cellular organisms → Bacteria	2601	Open in IMG/M
3300017935\|Ga0187848_10145895	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1045	Open in IMG/M
3300017938\|Ga0187854_10377721	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	596	Open in IMG/M
3300017988\|Ga0181520_10000457	All Organisms → cellular organisms → Bacteria	90741	Open in IMG/M
3300018003\|Ga0187876_1033715	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	2255	Open in IMG/M
3300018013\|Ga0187873_1306480	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	582	Open in IMG/M
3300018016\|Ga0187880_1115509	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1303	Open in IMG/M
3300018017\|Ga0187872_10175097	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1008	Open in IMG/M
3300018018\|Ga0187886_1053752	All Organisms → cellular organisms → Bacteria → FCB group → Candidatus Latescibacteria → unclassified Candidatus Latescibacteria → Candidatus Latescibacteria bacterium	1845	Open in IMG/M
3300018019\|Ga0187874_10204605	Not Available	819	Open in IMG/M
3300018020\|Ga0187861_10157865	Not Available	1041	Open in IMG/M
3300018021\|Ga0187882_1130833	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300018022\|Ga0187864_10125822	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1298	Open in IMG/M
3300018022\|Ga0187864_10137991	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1220	Open in IMG/M
3300018025\|Ga0187885_10325746	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	693	Open in IMG/M
3300018033\|Ga0187867_10022397	All Organisms → cellular organisms → Bacteria	4045	Open in IMG/M
3300018035\|Ga0187875_10025712	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3551	Open in IMG/M
3300018086\|Ga0187769_10410408	Not Available	1019	Open in IMG/M
3300020163\|Ga0194039_1000366	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	28362	Open in IMG/M
3300021071\|Ga0194058_10132214	Not Available	826	Open in IMG/M
3300021170\|Ga0210400_10219937	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1547	Open in IMG/M
3300022555\|Ga0212088_10095355	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2771	Open in IMG/M
3300027854\|Ga0209517_10002446	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	26179	Open in IMG/M
3300027896\|Ga0209777_10011374	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Geminisphaera	9359	Open in IMG/M
3300027896\|Ga0209777_10335913	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1156	Open in IMG/M
3300027896\|Ga0209777_10481019	Not Available	919	Open in IMG/M
3300027896\|Ga0209777_10726364	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	704	Open in IMG/M
3300027896\|Ga0209777_10794120	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	665	Open in IMG/M
3300027899\|Ga0209668_10015273	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3692	Open in IMG/M
3300027905\|Ga0209415_10007002	All Organisms → cellular organisms → Bacteria	19835	Open in IMG/M
3300027911\|Ga0209698_11433532	Not Available	502	Open in IMG/M
3300028556\|Ga0265337_1126110	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	694	Open in IMG/M
3300031232\|Ga0302323_100751210	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300031511\|Ga0307424_1167685	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	690	Open in IMG/M
3300031726\|Ga0302321_103604073	Not Available	503	Open in IMG/M
3300031834\|Ga0315290_10115201	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2282	Open in IMG/M
3300031834\|Ga0315290_11438221	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	563	Open in IMG/M
3300031902\|Ga0302322_102804563	Not Available	601	Open in IMG/M
3300031997\|Ga0315278_10239057	All Organisms → cellular organisms → Bacteria	1874	Open in IMG/M
3300031997\|Ga0315278_11144476	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300031997\|Ga0315278_12026818	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	537	Open in IMG/M
3300032118\|Ga0315277_10003342	All Organisms → cellular organisms → Bacteria	21774	Open in IMG/M
3300032160\|Ga0311301_11309567	Not Available	915	Open in IMG/M
3300032164\|Ga0315283_11060998	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	854	Open in IMG/M
3300032173\|Ga0315268_11125331	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	793	Open in IMG/M
3300032256\|Ga0315271_10051668	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2977	Open in IMG/M
3300032275\|Ga0315270_10017248	All Organisms → cellular organisms → Bacteria	3908	Open in IMG/M
3300032397\|Ga0315287_11615174	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	729	Open in IMG/M
3300032782\|Ga0335082_11558382	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	533	Open in IMG/M
3300032805\|Ga0335078_10022597	All Organisms → cellular organisms → Bacteria	9357	Open in IMG/M
3300032892\|Ga0335081_11748987	Not Available	675	Open in IMG/M
3300032897\|Ga0335071_10246049	All Organisms → cellular organisms → Bacteria	1742	Open in IMG/M
3300032897\|Ga0335071_11850740	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	547	Open in IMG/M
3300033402\|Ga0326728_10016089	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	15356	Open in IMG/M
3300033402\|Ga0326728_10098852	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3543	Open in IMG/M
3300033402\|Ga0326728_10192678	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2076	Open in IMG/M
3300033402\|Ga0326728_10262840	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1626	Open in IMG/M
3300033405\|Ga0326727_10176419	Not Available	2421	Open in IMG/M
3300033433\|Ga0326726_11109274	Not Available	769	Open in IMG/M
3300033482\|Ga0316627_100444628	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1131	Open in IMG/M
3300033483\|Ga0316629_10852884	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	704	Open in IMG/M
3300033483\|Ga0316629_11490144	Not Available	551	Open in IMG/M
3300033819\|Ga0334816_093365	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	553	Open in IMG/M
3300033823\|Ga0334837_004759	All Organisms → cellular organisms → Bacteria	7554	Open in IMG/M
3300033977\|Ga0314861_0227005	Not Available	870	Open in IMG/M
3300033982\|Ga0371487_0462339	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	538	Open in IMG/M
3300034125\|Ga0370484_0034625	Not Available	1215	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.83%
Host-Associated	Host-Associated	2.17%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	52.17%
Terrestrial	Environmental → Terrestrial	45.65%
Plants	Host-Associated → Plants	2.17%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	44.20%
Soil	Environmental → Terrestrial → Soil	36.96%
Peat	Environmental → Terrestrial → Peat	8.70%
Marine	Environmental → Aquatic → Marine	5.07%
Sediment	Environmental → Aquatic → Sediment	2.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	27.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	21.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	13.04%
Lake	Environmental → Aquatic → Freshwater → Lake	10.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.70%
Lentic	Environmental → Aquatic → Freshwater → Lentic	5.80%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.90%
Loam	Environmental → Terrestrial → Soil → Loam	2.17%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	21.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.32%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	12.32%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.42%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.70%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	7.97%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.52%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	5.07%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	3.62%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.72%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.72%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	12.32%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	10.87%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	7.25%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	7.97%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.52%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.80%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	5.07%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.07%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	5.07%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	3.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.62%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.17%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.45%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.45%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.45%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.45%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	0.72%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.72%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.72%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.72%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.72%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.72%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.72%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.72%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.72%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.72%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300004015	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D1	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004775	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA17M	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005831	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.43_YBM	Environmental	Open in IMG/M
3300007775	Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D2_MG	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009548	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_100	Environmental	Open in IMG/M
3300009618	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009640	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009760	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010413	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020163	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-8m	Environmental	Open in IMG/M
3300021071	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-17m	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031511	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-20	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033819	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-M	Environmental	Open in IMG/M
3300033823	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S3 30-34	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M
3300033982	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fraction	Environmental	Open in IMG/M
3300034125	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_tus_01_15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1026242982	3300001213	Wetland	NMKVITQKHVKSAMDRLAELLKADGGNQSMMVQEWLDVAQPRPAQFPNSLPALEMLVLLGLGDERVPALELG*
JGIcombinedJ13530_1066623462	3300001213	Wetland	MKVITQKDMNVAMNHVAALLKKDGALDTLTVQEWLDVAEFRPAQFSSSLPALEVLGKLGLGDVVVKAEAAG*
JGIcombinedJ13530_1074035841	3300001213	Wetland	MVRAGTTLPHRQNHSMKVISKTQMNLAMERVATLLREDGATETLTVQEWLDDAEARPTRFSSSLPALEVLGLLGFGDELVRAAQ*
JGI20214J51088_103820192	3300003432	Wetland	MKIITQKQKDLAIGYVGELLKQDGAIQTQTVQEWLDIAQPRPAQFASSLPALEILGLLGFGDVMVQAAKPG*
JGI20214J51650_111946771	3300003541	Wetland	MKIITQKQKDLAIGYVGELLKQDGAIQTQTVQEWLDIAQPRPAQFASSLPALEILGLL
Ga0031655_102580372	3300003852	Freshwater Lake Sediment	MKVITQKQLKLAIERVAGLLKEDGATQSMTVQEWLDVAQFRPAQFPCSLPALEVLGLLGFGDQMVQAEALG*
Ga0055462_101648481	3300004015	Natural And Restored Wetlands	MKVITQNQKKLAIERVATLLKEDGATQTMSVQEYLDVAQFRPAQFPCSLPALEILGLLGFGDEPVQPEELG*
Ga0062385_106787102	3300004080	Bog Forest Soil	VSPETIDERMKLISQKHLQSAMEHTAELLKKDGSTQSMTVQELLDVAQFHPAQFASSLPALEILGLLGLGSEVVRVAEIA*
Ga0062389_1011884282	3300004092	Bog Forest Soil	MKLISQKHLQSAMEHTAELLKKDGSTQSMTVQELLDVAQFHPAQFASSLPALEILGLLGLGSEVVRVAEIA*
Ga0007798_100218222	3300004775	Freshwater	MNYTVRITADRIMKVITQKQSELAVGHVAELLKRDGSMQTQTVQEWLDVAQLHPAQFPSSLPALETLGLLGFGNTLVHAEKPG*
Ga0066388_1012731233	3300005332	Tropical Forest Soil	IEHVARLLKKDGVNQTLTVQELLDAAQFHPAQFPSALPALEVLSLLGFGDELVRAEKLG*
Ga0066388_1024705743	3300005332	Tropical Forest Soil	LAIEHVAGLLKRDGARQTLTVQEWLDDAQFRPAQFPSSLPALEILGLLGLGDQLVQAGALG*
Ga0070713_1001516682	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKVITQKQIRLAIEHAAALLKKDGANQTLTVQEWLDAAEFHPAQFPTALPALEILGLLGFGDELVRAKELG*
Ga0074471_108951631	3300005831	Sediment (Intertidal)	MAHVAELLKRDGAIQTLTVQEWLDAAQFRPAQFPSSLPALEILGLLGFGDELVQAEALG*
Ga0102953_10266083	3300007775	Soil	MKIITQKQMKLAMEHLAGLLKKDGAVQTLTVQEWLDTAQFRPAQFTTSLGALEILGLLGFGDEMVHVGV*
Ga0114951_101002702	3300009502	Freshwater	MKVITHKQMKLAIERVAGLLKDDGATQSMTVQEWLDVAQFRPAQFPCSLPALEILGLLGFGDEQVQAEAVG*
Ga0116214_11995042	3300009520	Peatlands Soil	MKVISRKQRELAIEHLAGLLQKDGASQTLSVQEWLDTAQFRPAQFPTSLHALEILGLLGFGDEMVRPETSG*
Ga0116107_10329753	3300009548	Peatland	MKVITQKQKGLAIEHIAGLLQKDGANQTLTVQEWLDVAELHPAQFGASAGALEVMGLLGFGDEVVRAEPAG*
Ga0116127_10987842	3300009618	Peatland	MKVITHKQTKAVVEHLAELLKKDGASQTLTVQAWLDAAQFHPAQFPSSLPALEILGLLGFGDEMVRPEILG*
Ga0116119_11748542	3300009629	Peatland	SIARNQSMKVITHKQTKAAVEHLAVLLKKDGASQTLTVQAWLDAAQFHPAQFPSSLPALEILGLLGFGDEMVRPEILG*
Ga0116114_10010176	3300009630	Peatland	MKVITHKQMKLAIEHLAGLLKKDGASQTLTVQEWLDAAQFRPAQFPSSLAALEILGLLGFGDEMVQPETLG*
Ga0116102_10942612	3300009632	Peatland	IIATDIMKIISQKQRELAMGHLAELLKQDGGTQTQTVQEWLDVAQLRPAQFPSSLPALEVLGLLGFGDVLVQAERPR*
Ga0116126_11323462	3300009640	Peatland	MKVITHKQMKLATEHLAELLKRDGAQTLTVQEWLDAAQPQPGQFPSSLPALEILGLLGFGDEVVQPGTSS*
Ga0116126_11972663	3300009640	Peatland	MKVITHKQTKAAVEHLAELLKKDGASQTLTVQAWLDAAQFHPAQFPSSLPALEILGLLGF
Ga0116126_12355901	3300009640	Peatland	IATDITKIISQKQRELAMGRLAELLKQDGGMQTQTVQEWLDIAQLRPAQFPSSLPALEVLGLLGFGDVLVQAERPR*
Ga0116224_106342021	3300009683	Peatlands Soil	SMKVISRKQRELAIEHLAGLLQKDGASQTLSVQEWLDTAQFRPAQFPTSLHALEILGLLGFGDEMVRPETSG*
Ga0116131_10546883	3300009760	Peatland	MKVITHKQTKAAVEHLAELLKKDGASQTLTVQAWLDAAQFHPAQFPSSLPALEILGLLGFGDEMVRPEILG*
Ga0116219_102226052	3300009824	Peatlands Soil	MKVISRKQRELAIEHLAGLLQKDGASQTLSVQEWLDTAQFRPAQFPTSLHALEI
Ga0126382_115124211	3300010047	Tropical Forest Soil	MKVITQKQMKLAIEHVAGLLKRDGAMQTLTVQEWLDDAQFRPAQFPSSLPALEILGLLGLGDQLVQAGALG*
Ga0074046_102315271	3300010339	Bog Forest Soil	MKVITHKQMKLATEHLAELLKRDGASQTLTVQEWLDAAQPQPGVFPSSLPALEILGLLGFGDEVVQPGTSG*
Ga0126378_127532921	3300010361	Tropical Forest Soil	MKVITQKQMKLAIEHVARLLKRDGAMQTLTVQEWLDDAQFRPAQFPSSLPALEILGLGFGDQLVQAAVLG*
Ga0126379_136525321	3300010366	Tropical Forest Soil	MKVIAQKQIQLAIDHTAGLLKKDGETQTLTVQEWLDAAEFHPAQFPSALPALEILGLLGFGDQLVRSKGLG
Ga0136449_1019173823	3300010379	Peatlands Soil	MKIISQKQRELAMGHLAELLKQDGGTQTQTVQEWLDVAQLRPAQFPSSLPALEVLGLLGFGDVLVQAERPS*
Ga0126383_112550351	3300010398	Tropical Forest Soil	MKVITQKQMKLAIEHVAGLLKRDGAMQTLTVQEWLDDAQFRPAQFPSSLPALEILGLLGFGDQLVQAAALG*
Ga0136851_100528602	3300010413	Mangrove Sediment	MKVISQKQTKLAIEHVAKLLKQDGAIQTQTVQEWLDAAQLRPAGFPASLPALEILGLLGFGNELVRAEPLG*
Ga0137463_10922682	3300011444	Soil	MKIITQKQRELAIGHLAELLKRDGQIQTKTVQEWLDDADHQPSQFQCSLAGLEVLDRLGFGDELVQPEALG*
Ga0137363_108773422	3300012202	Vadose Zone Soil	MKVITQKQSQLAIDHVAGLLKKDGVTQTLTVQELLDAAQFHPAQFPSALPALEILSLLGFGDELVRAEKLG*
Ga0137362_108115612	3300012205	Vadose Zone Soil	PRNQRMKVITQKQSQLAIDHVAGLLKKDGVTQTLTVQELLDAAQFHPAQFPSALPALEILSLLGFGDELVRAEKLG*
Ga0150985_1067104511	3300012212	Avena Fatua Rhizosphere	IVTTITMKIISQKQRELAMDHAAELLMRDGQLQTKTVQEWLDDADHQPSQFQASLPGLEILSLLGFGDELVRAKELR*
Ga0137359_101780454	3300012923	Vadose Zone Soil	MKVITQKQIQLAIEHTAGLLKKDGVTQTLTVQELLDAAQFHPAQFPSALPALEILGLLGLGDELVRAEKLG*
Ga0137359_107262411	3300012923	Vadose Zone Soil	QRMKVITQKQSQLAIDHVAGLLKKDGVTQTLTVQELLDAAQFHPAQFPSALPALEILSLLGFGDELVRAEKLG*
Ga0137404_122313281	3300012929	Vadose Zone Soil	MKIITQKQRELAMGHLAELLKRDGQIQTKTVQEWLDDADHQPSQFQCSLAGLEVLDRLGFGDELVHAEALG*
Ga0126369_111774381	3300012971	Tropical Forest Soil	MKVIAQKQIQLAIDHTAGLLKKDGETQTLTVQEWLDAAEFHPAQFPSALPALEILGLLGFGDQLVRSKGLG*
Ga0181539_10255435	3300014151	Bog	MKVISQKQTKMAIDHIAGVLNKEGANQTLTVQEWLDVAETRPAQFMSSLSGLEVLGLLGFGDQLIRAEPVAWSPSAPR*
Ga0181539_10759212	3300014151	Bog	MKVISQKQTKLAIEHIAELLKKDGANQTLTVYEWLDVAEVRPAQFNSSAGALQVLGLLGFGDEIVRAQPVG*
Ga0181539_11140351	3300014151	Bog	SRKHAASIIRNHSMKVITHKQMKLAIEHLAGLLKKDGASQTLTVQEWLDAAQFRPAQFPSSLAALEILGLLGFGDEMVQPETLG*
Ga0181518_100186593	3300014156	Bog	MKIISQKQRELAMGHLAELLKQDGGTQTQTVQEWLDVAQLRPAQFPSSLPALEVLGLLGFGDVLVQAERPR*
Ga0181521_100678834	3300014158	Bog	MKVISQKQTKLAIEHIAELLKKDGANQTLTVYEWLDVAEVRPAQFNSSAGALQVLGLLGF
Ga0181517_100329654	3300014160	Bog	MKVITQKQRKLAIDHIAELLNKDGANQTLTVQEWLDVAETKPAQFLYSLSGLEVLGLLGFGDEVVRVEPVAWSAVGLQ*
Ga0181529_1000018774	3300014161	Bog	MKVITHKQMKSAIAHLAELLKRDGASQTLTVQELLDAAQFHPAQFPSSLPALEILGLLGFGDEMVQPETLG*
Ga0182010_104614881	3300014490	Fen	MKVITHKQMKLATEHVAELLKRDGASQTLTVQEWLDAAQPQPGVFPSSLPALEILGLLGFGDEVVQAETSG*
Ga0182010_108304832	3300014490	Fen	MKVITHKQIKLAIEHLAELLRRDGASQTHTVQEWLDAAQPTPGQFPSSLPALEVLGLLGFGDEVVQPETSG*
Ga0182014_100035693	3300014491	Bog	MKIISQKQRELAMGHLAELLKRDGGTQTQTVQEWLDVAQLHPGQFASSLPALEVLGLLGFGDVLVQAERPR*
Ga0182014_103306783	3300014491	Bog	AIEHLAELLKRDGASQTLTVQEWLDAAQFHPAEFPSSLPALEMLGLLGLGDELVRPETSG
Ga0182017_104669042	3300014494	Fen	MKVITHKQVKLAIEHLAELLRRDGASQTHTVQEWLDAAQPTPGQFPSSLPALEVLGLLGFGDEVVQPETSG*
Ga0182019_102581021	3300014498	Fen	MKVITQKQKKLAIDCIAGRLKEDGATQTMTVQEWLDVAQFRPAQFPCSLPALEI
Ga0182019_103379751	3300014498	Fen	AELLKQDGGMQTQTVQEWLDIAQLHPAQFPSSLSALEILGLLGFGDVLVQAEKPG*
Ga0182019_104523913	3300014498	Fen	MKVIIHKQMKLATEHVAELLKRDGASQTLTVQEWLDAAQPQPGVFPSSLPALEILGLLGFGDEVVQAETSG*
Ga0182019_104547203	3300014498	Fen	MKIITQKQVKSAIHHLAELLKEDGASQTLTVQELLNAAQLHPAQFPASLPALEVLGLLGLGDEIVQPEPLG*
Ga0182019_107380751	3300014498	Fen	MKIITQKQRELATGYVADLLKQDGAIQTMTVQEWLDVAQLQPAQFPSSLPALEI
Ga0182021_107933572	3300014502	Fen	MKIISQKQRELAMGHLAELLKQDGGTQTQTVQEWLDIAQLHPAQFPSSLPALEILGLLGFGDSLVQAEKPG*
Ga0182021_118747781	3300014502	Fen	MKVITHKQMKLAMEHLAELLKKDGASQTLTVQEWLDLAQPLPGQFPSSLAALEILGLLGFGDEVVQPETSG*
Ga0182021_124087672	3300014502	Fen	MKIVTQKQRELAISYVAELLKQDGGIQTMTVQEWLDVAQPRPAQFPSSLPALEILGLLGFGDVMVQAAKPG*
Ga0182021_127767001	3300014502	Fen	MKVITHKQMKLAIEHLAELLKRDGASETHTVQEWLDAAQPTPGQFPSSLPALEVLGLLGFGDE
Ga0182021_129812652	3300014502	Fen	MKVITRKQMELAIEHLAGLLKKDGASQTLTVQEWLDAAQFHPAQFSSSLPALEILGLLGFGDEMVRPETSG*
Ga0182021_137425242	3300014502	Fen	FSGEGLLAELLKRDGASQTLTVQEWLDAAQFHPAQFASSLPALEMLGLLGFGDELVRLEASG*
Ga0181536_103299872	3300014638	Bog	MKFITHKQMRLAMEHLAGLLKKDGASQTHTVQEWLDVAQPLPGQFASSLPALEILGLLGFGD
Ga0181525_102226731	3300014654	Bog	MKVITHKQMKSAIAHLAELLKRDGASQTLTVQELLDAAQFHPAQFPSSLPALEIL
Ga0182027_108945612	3300014839	Fen	MACLPDIATNHIMKIISQKQREQAIGYVAELLKRDGGMQTQKVQEWLDVAQLHPAQFPSSLPALEILALLGLGNEMVEAKEPG*
Ga0157376_105556281	3300014969	Miscanthus Rhizosphere	MKVIAHKQIQLAIEHVATLLKKDGVTQTLTVQELLDAAEFHPAQFPTALPALEILGLLGFGDELVRAEELG*
Ga0187856_10203681	3300017925	Peatland	SIARNQIMKVITQKQMKLAVEHVAGLLQKDGANQTLTVQEWLDVAEVRPAQFLSSLPALQILGLLGLGDQLVRAQPVG
Ga0187849_10334542	3300017929	Peatland	MKVITQKQKGLAIEHIAGLLQKDGANQTLTVQEWLDVAELHPAQFGASAGALEVMGLLGFGDEVVRAEPAG
Ga0187848_101458952	3300017935	Peatland	MKVITHKQTKAAVEHLAELLKKDGASQTLTVQAWLDAAQFHPAQFPSSLPALEILGLLGFGDEMVRPEILG
Ga0187854_103777212	3300017938	Peatland	MKVITHKQMKLAIEHLAGLLKKDGASQTLTVQEWLDAAQFRPAQFPSSLAALEILGLLGFGDEMVQPETLG
Ga0181520_1000045774	3300017988	Bog	MKVITHKQMKSAIAHLAELLKRDGASQTLTVQELLDAAQFHPAQFPSSLPALEILGLLGFGDEMVQPETLG
Ga0187876_10337153	3300018003	Peatland	ARNQIMKVITQKQMKLAVEHVAGLLQKDGANQTLTVQEWLDVAEVRPAQFLSSLPALQILGLLGLGDQLVRAQPVG
Ga0187873_13064802	3300018013	Peatland	IARNQSMKVITHKQTKAAVEHLAELLKKDGASQTLTVQAWLDAAQFHPAQFPSSLPALEILGLLGFGDEMVRPEILG
Ga0187880_11155093	3300018016	Peatland	MKVITHKQMKLATEHLAELLKRDGAQTLTVQEWLDAAQPQPGQFPSSLPALEILGLLGFGDEVVQPGTSS
Ga0187872_101750974	3300018017	Peatland	MEHLAGLLKKDGASQTHTVQEWLDVAQPLPGQFASSLPALEILGLLGFGDELVQPETSG
Ga0187886_10537523	3300018018	Peatland	MKVITQKQTQLAIEHVAGLLNRDGANQTLTVQEWLDVAQFRPAQFVSSLPALEILGLLGFGNEVVRAEILG
Ga0187874_102046052	3300018019	Peatland	MGRLAELLKQDGGMQTQTVQEWLDIAQLRPAQFPSSLPALEVLGLLGFGDVLVHAQEPG
Ga0187861_101578651	3300018020	Peatland	TEHLAELLKRDGAQTLTVQEWLDAAQPTPGQFPSSLPALEVLGLLGFGDEVVQPETSG
Ga0187882_11308332	3300018021	Peatland	MKVITHKQIKLAIEHLAELLRRDGASQTHTVQEWLDAAQPTPGQFPSSLPALEVLGLLGFGDEVVQPGTSS
Ga0187864_101258224	3300018022	Peatland	EHLAGLLKKDGASQTHTVQEWLDVAQPLPGQFASSLPALEILGLLGFGDELVQPETSG
Ga0187864_101379912	3300018022	Peatland	MKVITHKQTKAAVEHLAELLKKDGASQTLTVQAWLDAAQFRPAQFPSSLAALEILGLLGFGDEMVRPEILG
Ga0187885_103257461	3300018025	Peatland	RNLLSTSPPGREHTASIARNRIMKVITQKQKGLAIEHIAGLLQKDGANQTLTVQEWLDVAELHPAQFGASAGALEVMGLLGFGDEVVRAEPAG
Ga0187867_100223973	3300018033	Peatland	MGHLAELLKQDGGTQTQTVQEWLDVAQLRPAQFPSSLPALEVLGLLGFGDVLVQAERPR
Ga0187875_100257121	3300018035	Peatland	TGGTIQIIATDIMKIISQKQRELAMGHLAELLKQDGGTQTQTVQEWLDVAQLRPAQFPSSLPALEVLGLLGFGDVLVQAERPR
Ga0187769_104104083	3300018086	Tropical Peatland	MKVISHKQMKLATEHLAELLKRDGAAQTLTVQEWLDAAQPAPGQFPSSLPALEILGLLGFGDEVVQPGTSV
Ga0194039_10003663	3300020163	Anoxic Zone Freshwater	MNYTVRITADRIMKVITQKQSELAVGHVAELLKRDGSMQTQTVQEWLDVAQLHPAQFPSSLPALETLGLLGFGNTLVHAEKPG
Ga0194058_101322142	3300021071	Anoxic Zone Freshwater	MKHIITITPDPIMKVITQKQSELAVGHVAELLKRDGSMQTQTVQEWLDVAQLHPAQFPSSLPALETLGLLGFGNTLVHAEKPG
Ga0210400_102199371	3300021170	Soil	MKIMAQKQIQLAIEHVARLLKKDGVTQTLTVQELLDAAQLHPAQFPSALPALEILGLLGFGDELVRAEKLG
Ga0212088_100953554	3300022555	Freshwater Lake Hypolimnion	MKVITHKQMKLAIERVAGLLKDDGATQSMTVQEWLDVAQFRPAQFPCSLPALEILGLLGFGDEQVQAEAVG
Ga0209517_100024469	3300027854	Peatlands Soil	MKVISRKQRELAIEHLAGLLQKDGASQTLSVQEWLDTAQFRPAQFPTSLHALEILGLLGFGDEMVRPETSG
Ga0209777_100113744	3300027896	Freshwater Lake Sediment	MKVITQKQLKLAIERVAGLLKEDGATQSMTVQEWLDVAQFRPAQFPCSLPALEVLGLLGFGDQMVQAEALG
Ga0209777_103359132	3300027896	Freshwater Lake Sediment	MKVITHKQMKSAIEHLAELLKRDGASQTLTVQEWLDAAQFHPAQLAFSLPALEMLGLLGFGDELVRLEASG
Ga0209777_104810192	3300027896	Freshwater Lake Sediment	LLKQDGGIQTQTAQEWLDFAQLHPGQFQFSLPALEILGLLGFGDVLVQAGKPS
Ga0209777_107263641	3300027896	Freshwater Lake Sediment	MKIISQKQRELAMGRLAELLKQDGGMQTQTVQEWLDIAQLHPAQFPSSLPALEILGLLGFGDVLVQAEKPG
Ga0209777_107941201	3300027896	Freshwater Lake Sediment	MKVITQKQMKLAIERVAGLLKEDGATQTMTVQEWLDIAQFRPAQFPCSLPALEILGLLGLGDEMVQAETFG
Ga0209668_100152731	3300027899	Freshwater Lake Sediment	MKIITQKQKDLAIGYVAELLKQDGAIQTQTVQEWLDIAQPRPAQFAPSLPALEILGLLGFGDVIVQAAKPG
Ga0209415_100070026	3300027905	Peatlands Soil	MKVISQKQMKLAMERIAGLLKEDGADQTLTVQEWLDVVEVRPAQFRTSAGALQILALLGFGNEIVRAEPVG
Ga0209698_114335321	3300027911	Watersheds	MKIIAQKQSKSAIVRVAELLKEDGAAQTLTVQEWLDAAELRPAQFAHSLPALEVLALLGYGDELVQSQ
Ga0265337_11261102	3300028556	Rhizosphere	HQGMKVITHKQMKLATEHVAELLKRDGASQTLTVQEWLDAAQPQPGVFPSSLPALEILGLLGFGDEVVQAETSG
Ga0302323_1007512102	3300031232	Fen	MKVITHKRMELAMEHLAGLLKKDGASQTLSVQAWLDAAEYRPAEFSSSLPALEILGLLGFGDELVRPAAAG
Ga0307424_11676851	3300031511	Salt Marsh	MKLAIEHVAGLLKKDGAAQTLTVQGWLDIAQFRPAQFPTSLGALEILGLLGFEDEMVHVGISG
Ga0302321_1036040731	3300031726	Fen	MKIITHKQVKSAIHHLAELLKQDGASQTLTVQELLNAAQFHPAQFPASLPALEVLGLLGLGDEVVQPEPLG
Ga0315290_101152013	3300031834	Sediment	MKVITHKQMKLAMERVSGLLKEDGETQTLTVQEWLDVAESRPAQFAHSLPALEILGLLGFGDETVQPECVG
Ga0315290_114382212	3300031834	Sediment	GYVAELLKQDGAIQTMTVQEWLDIAQPRPAQFPTSLPALEILGLLGFGDVMVQAAKPG
Ga0302322_1028045631	3300031902	Fen	MKIISQKQRELAMGHLAELLKQDGGTQTQTVQEWLDIAQLHPAQFPSSLPALEVLGLLGFGDSLVQAEKPG
Ga0315278_102390573	3300031997	Sediment	MKLAIEHIAGLLKKDGASQTLTVQEWLDAAEFRPAEFSSSLPALEILGLLGFGDELVRPATLG
Ga0315278_111444762	3300031997	Sediment	MKIITQKQRDLAIGYVAELLKQDGAIQTMTVQEWLDIAQPRPAQFPTSLPALEILGLLGFGDVMVQAAKPG
Ga0315278_120268182	3300031997	Sediment	MKVVTQKQMNSAIERLAGLLKEDGATQTMTVQEWLDVAQFRPAQFPCSLPA
Ga0315277_1000334217	3300032118	Sediment	MDYAAELLKRDGWIQTKTIQEWIDQAEFRPAQFPSSLPALQILRLLGFGDELLQAKELG
Ga0311301_113095673	3300032160	Peatlands Soil	MKIISQKQRELAMGHLAELLKQDGGTQTQTVQEWLDVAQLRPAQFPSSLPALEVLGLLGFGDVLVQAERPS
Ga0315283_110609982	3300032164	Sediment	MKVISHKQMKLAMERVSGLLKEDGETQTLTVQEWLDVAESRPAQFAHSLPALEILGLLGFGDETVQPECVG
Ga0315268_111253311	3300032173	Sediment	MDFAAELLKRDGWIQTRTIQEWIDQAEFRPAQFPSSLPALQILRLLGFGDELLQAEALG
Ga0315271_100516683	3300032256	Sediment	MKVITHKRLELAKEYLAGLLKKDGSSQTLTVQQWLDAAQYRPAQFSSSLPALEILQLLGFGDEIVQPEA
Ga0315270_100172481	3300032275	Sediment	MKVISQKQLKLAIEHVAELLKRDGAIQTLTVQEWLDAAQFRPAQFPSSLPALEILGLLGFGD
Ga0315287_116151743	3300032397	Sediment	MKVVTQKQMNSAIERLAGLLKEDGATQTMTVQEWLDFAQFRPAQFPCSLPALEMLGLLG
Ga0335082_115583821	3300032782	Soil	MKVVTQKHTQLAVEHLAGLLKRDGATQTLTVQEWLDVAQFKPAQFPCSLPALEVLGLLGFGGEMVRPQALG
Ga0335078_100225974	3300032805	Soil	MGHLAELLKRDGGTQTQTVQEWLDVAQLRPAQFPSSLPALEVLGLLGFGDVLVQAERPG
Ga0335081_117489871	3300032892	Soil	MKIVSQKQRELAMGHLAELLKRDGGTQTQTVQEWLDVAQLRPAQFPSSLPALEVLGLLGFGDVLVQAERPG
Ga0335071_102460492	3300032897	Soil	MKVITHKQMKSAFERVAGMLHEDGETETRTVGEWLDVAASRPTHFANSLSALEILGLLGFGNETVQPRSLG
Ga0335071_118507401	3300032897	Soil	MKVINHKQMKLAIEHLAELLKRDGASQTLTVQEWLDAAQPQPGQFPASLPALEILGLLGFGDEVVRPEASG
Ga0326728_1001608919	3300033402	Peat Soil	MKVISQKQTKLAIEHIAELLKKDGANQTLTVYEWLDVAEVRPAQFNSSAGALQVLGLLGFGDEIVRAQPVG
Ga0326728_100988522	3300033402	Peat Soil	MKVITHKQMKLATEHLAELLKRDGASQTLTVQEWLDAAQPQPGAFPSSLPALEILGLLGFGDQVVQPGTSG
Ga0326728_101926782	3300033402	Peat Soil	MKVITHKQVKPVIDHIAGLLKKDGANQTLTVQEWLDVAQLRPAQFPSSLPALEVLGLLGFGDEVVQAEPVG
Ga0326728_102628402	3300033402	Peat Soil	MKIVSQKQRELAMGHLAELLKQDGGTQTQTVQEWLDVAQLRPAQFPSSLPALEVLGLLGFGDVLVQAERPS
Ga0326727_101764191	3300033405	Peat Soil	MKIVSQKQRELAMGHLAELLKQDGGTQTQTVQEWLDVAQLRPAQFPSSLP
Ga0326726_111092741	3300033433	Peat Soil	MKIISQKQRELAMGRLAELLKQDGGMQTQTVQEWLDIAQLRPAQFPSSLPAL
Ga0316627_1004446283	3300033482	Soil	MKVISQKQLKSAIDHVAELLKSDGAIQTQTVQEWLDAAQFRPAQFPSSLPALEILALLGFGNEMVQAESLG
Ga0316629_108528842	3300033483	Soil	MKVITHKQKKLALEHLAELLKRDGASQTLTVQEWLDAAQPQPGQFPCSLPALEILGLLGFGEEVVQPETSG
Ga0316629_114901441	3300033483	Soil	KSAIDHVAELLKSDGAIQTQTVQEWLDAAQFRPAQFPSSLPALEILALLGFGNEMVQAESLG
Ga0334816_093365_246_461	3300033819	Soil	MKVITHKQMKLATEHVAELLKRDGASQTLTVQEWLDAAQPQPGVFPSSLPALEILGLLGFGDEVVQAETSG
Ga0334837_004759_3372_3587	3300033823	Soil	MKIISQKQRELAMGHLAELLKRDGGTQTQTVQEWLDVAQLHPGQFASSLPALEVLGLLGFGDVLVQAERPR
Ga0314861_0227005_663_869	3300033977	Peatland	ITQKQKKLAMEHIAGLLQKDGANQTLTVQEWLDVAELRPAQFQASAAGLEILGLLGFGGEVVRVEPAG
Ga0371487_0462339_93_308	3300033982	Peat Soil	MKVVTHKHTKSAIKHLAELLKRDGAEETKTVQEWLDVAQLRPAQFRSSLPALEILGLLGFRDEMVMPEALG
Ga0370484_0034625_755_970	3300034125	Untreated Peat Soil	MKIISQKQRELAMGHLAELLKRDGGMQTQTVQEWLDIAQLRPAQFPSSLPALEVLGLLGFGDVLVQAEKPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F055431

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences