Metagenome / Metatranscriptome Family F055474

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055474
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	54 residues
Representative Sequence	MPFGIKAFSQFSLPEVHLRKTPDFPSLPVARLHINDDDRGSTFQVRYVSRGSLFS
Number of Associated Samples	116
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	92.03 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	100.00 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (97.826 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.188 % of family members)
Environment Ontology (ENVO)	Unclassified (25.362 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.449 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.43% β-sheet: 21.69% Coil/Unstructured: 69.88%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00011	HSP20	0.72
PF14870	PSII_BNR	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.72

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.83 %
All Organisms	root	All Organisms	2.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.83 %
cellular organisms	root	All Organisms → cellular organisms	2.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.83 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	2.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.83 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.83 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.83 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.72 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.83 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.72 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	97.83 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.72 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002653\|Ga0005486J37273_102022	Not Available	502	Open in IMG/M
3300002659\|Ga0005474J37262_100351	Not Available	512	Open in IMG/M
3300002662\|Ga0005456J37224_100863	Not Available	515	Open in IMG/M
3300002673\|Ga0005480J37268_100135	Not Available	517	Open in IMG/M
3300002866\|Ga0006772J43183_114448	Not Available	597	Open in IMG/M
3300003159\|Ga0006771J45828_103900	Not Available	516	Open in IMG/M
3300003162\|Ga0006778J45830_1017034	Not Available	507	Open in IMG/M
3300003569\|Ga0007420J51693_1013055	Not Available	509	Open in IMG/M
3300003706\|Ga0008095_100073	Not Available	523	Open in IMG/M
3300004100\|Ga0058904_1004272	Not Available	502	Open in IMG/M
3300004115\|Ga0058890_105565	Not Available	515	Open in IMG/M
3300004116\|Ga0058885_1001144	Not Available	501	Open in IMG/M
3300004131\|Ga0058898_1214515	Not Available	502	Open in IMG/M
3300004132\|Ga0058902_1012967	Not Available	517	Open in IMG/M
3300004132\|Ga0058902_1026117	Not Available	503	Open in IMG/M
3300005836\|Ga0074470_11693030	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1102	Open in IMG/M
3300006934\|Ga0080680_1224680	Not Available	501	Open in IMG/M
3300010061\|Ga0127462_173605	Not Available	508	Open in IMG/M
3300010062\|Ga0127426_137690	Not Available	505	Open in IMG/M
3300010067\|Ga0127432_119480	Not Available	507	Open in IMG/M
3300010072\|Ga0127428_152847	Not Available	503	Open in IMG/M
3300010073\|Ga0127429_141731	Not Available	512	Open in IMG/M
3300010084\|Ga0127461_1006269	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300010089\|Ga0127454_1100688	Not Available	514	Open in IMG/M
3300010110\|Ga0126316_1139214	Not Available	508	Open in IMG/M
3300010114\|Ga0127460_1090673	Not Available	507	Open in IMG/M
3300010137\|Ga0126323_1136981	Not Available	510	Open in IMG/M
3300010137\|Ga0126323_1209283	Not Available	506	Open in IMG/M
3300010146\|Ga0126320_1110973	Not Available	513	Open in IMG/M
3300010147\|Ga0126319_1156722	Not Available	505	Open in IMG/M
3300010856\|Ga0126358_1162511	Not Available	510	Open in IMG/M
3300010857\|Ga0126354_1263849	Not Available	511	Open in IMG/M
3300010859\|Ga0126352_1044362	Not Available	520	Open in IMG/M
3300010860\|Ga0126351_1163430	Not Available	502	Open in IMG/M
3300011120\|Ga0150983_13594520	Not Available	507	Open in IMG/M
3300012212\|Ga0150985_100229645	Not Available	515	Open in IMG/M
3300012212\|Ga0150985_118750290	Not Available	506	Open in IMG/M
3300012224\|Ga0134028_1027076	Not Available	505	Open in IMG/M
3300012364\|Ga0134027_1076139	Not Available	505	Open in IMG/M
3300012371\|Ga0134022_1001010	Not Available	504	Open in IMG/M
3300012391\|Ga0134035_1031055	Not Available	511	Open in IMG/M
3300012393\|Ga0134052_1129230	Not Available	505	Open in IMG/M
3300012398\|Ga0134051_1225582	Not Available	511	Open in IMG/M
3300012400\|Ga0134048_1238712	Not Available	512	Open in IMG/M
3300012401\|Ga0134055_1059684	Not Available	503	Open in IMG/M
3300012401\|Ga0134055_1101422	Not Available	510	Open in IMG/M
3300012402\|Ga0134059_1047022	Not Available	565	Open in IMG/M
3300012403\|Ga0134049_1281758	Not Available	501	Open in IMG/M
3300012469\|Ga0150984_101343802	Not Available	508	Open in IMG/M
3300012469\|Ga0150984_112394244	Not Available	511	Open in IMG/M
3300019162\|Ga0184597_100938	Not Available	504	Open in IMG/M
3300019164\|Ga0184582_102363	Not Available	504	Open in IMG/M
3300019184\|Ga0184590_130375	Not Available	507	Open in IMG/M
3300019190\|Ga0184600_102217	Not Available	508	Open in IMG/M
3300019233\|Ga0184645_1240514	Not Available	510	Open in IMG/M
3300019259\|Ga0184646_1331341	Not Available	511	Open in IMG/M
3300019269\|Ga0184644_1607315	Not Available	572	Open in IMG/M
3300019279\|Ga0184642_1235014	Not Available	512	Open in IMG/M
3300020080\|Ga0206350_11025928	Not Available	507	Open in IMG/M
3300020610\|Ga0154015_1057665	Not Available	514	Open in IMG/M
3300021151\|Ga0179584_1110673	Not Available	502	Open in IMG/M
3300021151\|Ga0179584_1116659	Not Available	501	Open in IMG/M
3300021151\|Ga0179584_1317937	Not Available	526	Open in IMG/M
3300021315\|Ga0179958_1206550	Not Available	512	Open in IMG/M
3300022498\|Ga0242644_1046232	Not Available	504	Open in IMG/M
3300022498\|Ga0242644_1046298	Not Available	504	Open in IMG/M
3300022498\|Ga0242644_1046387	Not Available	504	Open in IMG/M
3300022499\|Ga0242641_1049382	Not Available	506	Open in IMG/M
3300022500\|Ga0242643_124687	Not Available	505	Open in IMG/M
3300022503\|Ga0242650_1026845	Not Available	505	Open in IMG/M
3300022508\|Ga0222728_1046682	Not Available	717	Open in IMG/M
3300022522\|Ga0242659_1144611	Not Available	501	Open in IMG/M
3300022523\|Ga0242663_1086647	Not Available	606	Open in IMG/M
3300022527\|Ga0242664_1070274	Not Available	675	Open in IMG/M
3300022530\|Ga0242658_1055799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	849	Open in IMG/M
3300022533\|Ga0242662_10326408	Not Available	518	Open in IMG/M
3300022533\|Ga0242662_10345581	Not Available	506	Open in IMG/M
3300022708\|Ga0242670_1081576	Not Available	508	Open in IMG/M
3300022709\|Ga0222756_1042515	Not Available	661	Open in IMG/M
3300022711\|Ga0242674_1073772	Not Available	504	Open in IMG/M
3300022718\|Ga0242675_1135817	Not Available	504	Open in IMG/M
3300022724\|Ga0242665_10395644	Not Available	504	Open in IMG/M
3300023537\|Ga0247541_101762	Not Available	619	Open in IMG/M
3300023662\|Ga0247545_105909	Not Available	521	Open in IMG/M
3300023677\|Ga0247543_106506	Not Available	500	Open in IMG/M
3300026380\|Ga0213910_127566	Not Available	509	Open in IMG/M
3300026380\|Ga0213910_128410	Not Available	500	Open in IMG/M
3300026392\|Ga0213908_139437	Not Available	507	Open in IMG/M
3300030626\|Ga0210291_11359171	Not Available	585	Open in IMG/M
3300030763\|Ga0265763_1055957	Not Available	506	Open in IMG/M
3300030811\|Ga0265735_108997	Not Available	509	Open in IMG/M
3300030824\|Ga0265726_107307	Not Available	502	Open in IMG/M
3300030829\|Ga0308203_1096223	Not Available	503	Open in IMG/M
3300030831\|Ga0308152_116272	Not Available	503	Open in IMG/M
3300030834\|Ga0265738_107050	Not Available	500	Open in IMG/M
3300030873\|Ga0265751_117006	Not Available	508	Open in IMG/M
3300030885\|Ga0265743_122088	Not Available	504	Open in IMG/M
3300030902\|Ga0308202_1163695	Not Available	502	Open in IMG/M
3300030902\|Ga0308202_1164701	Not Available	501	Open in IMG/M
3300030904\|Ga0308198_1101486	Not Available	505	Open in IMG/M
3300030905\|Ga0308200_1180038	Not Available	505	Open in IMG/M
3300030917\|Ga0075382_11769340	Not Available	531	Open in IMG/M
3300030937\|Ga0138302_1337491	Not Available	547	Open in IMG/M
3300030978\|Ga0265757_111886	Not Available	505	Open in IMG/M
3300030988\|Ga0308183_1220474	Not Available	502	Open in IMG/M
3300030990\|Ga0308178_1160568	Not Available	523	Open in IMG/M
3300030993\|Ga0308190_1199599	Not Available	503	Open in IMG/M
3300031024\|Ga0265724_105411	Not Available	506	Open in IMG/M
3300031043\|Ga0265779_114120	Not Available	517	Open in IMG/M
3300031090\|Ga0265760_10376587	Not Available	510	Open in IMG/M
3300031096\|Ga0308193_1096354	Not Available	503	Open in IMG/M
3300031098\|Ga0308191_1040008	Not Available	520	Open in IMG/M
3300031231\|Ga0170824_102640739	Not Available	526	Open in IMG/M
3300031231\|Ga0170824_108451451	Not Available	518	Open in IMG/M
3300031231\|Ga0170824_108572895	Not Available	578	Open in IMG/M
3300031231\|Ga0170824_110209217	Not Available	515	Open in IMG/M
3300031231\|Ga0170824_119367562	Not Available	537	Open in IMG/M
3300031421\|Ga0308194_10398908	Not Available	501	Open in IMG/M
3300031446\|Ga0170820_13104061	Not Available	562	Open in IMG/M
3300031469\|Ga0170819_15497850	Not Available	528	Open in IMG/M
3300031469\|Ga0170819_15820308	Not Available	503	Open in IMG/M
3300031474\|Ga0170818_100125756	Not Available	566	Open in IMG/M
3300031474\|Ga0170818_106465911	Not Available	528	Open in IMG/M
3300031474\|Ga0170818_114133057	Not Available	507	Open in IMG/M
3300031487\|Ga0314823_113769	Not Available	501	Open in IMG/M
3300031677\|Ga0307480_1023663	Not Available	507	Open in IMG/M
3300031677\|Ga0307480_1024088	Not Available	505	Open in IMG/M
3300031866\|Ga0316049_124921	Not Available	500	Open in IMG/M
3300031891\|Ga0316039_119568	Not Available	506	Open in IMG/M
3300034447\|Ga0370544_23084	Not Available	512	Open in IMG/M
3300034479\|Ga0314785_024792	Not Available	506	Open in IMG/M
3300034479\|Ga0314785_025317	Not Available	503	Open in IMG/M
3300034479\|Ga0314785_025774	Not Available	500	Open in IMG/M
3300034659\|Ga0314780_218805	Not Available	506	Open in IMG/M
3300034662\|Ga0314783_173809	Not Available	512	Open in IMG/M
3300034663\|Ga0314784_168019	Not Available	508	Open in IMG/M
3300034667\|Ga0314792_271871	Not Available	502	Open in IMG/M
3300034668\|Ga0314793_161931	Not Available	513	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.20%
Host-Associated	Host-Associated	5.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.23%
Aquatic	Environmental → Aquatic	7.97%
Plants	Host-Associated → Plants	5.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.23%
Freshwater	Environmental → Aquatic → Freshwater	7.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.17%
Sediment	Environmental → Aquatic → Sediment	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.26%
Loam	Environmental → Terrestrial → Soil → Loam	7.97%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	4.35%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.62%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	46.38%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.64%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.97%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.80%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.62%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.17%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.22%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	13.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	7.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.80%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	4.35%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.62%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.90%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	2.90%
Enriched Soil Aggregate	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Enriched Soil Aggregate	2.17%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.45%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.45%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002653	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF135 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002659	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF123 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002662	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF105 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002673	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF129 (Metagenome Metatranscriptome, Counting Only)	Environmental	Open in IMG/M
3300002866	Avena fatua rhizosphere microbial communities - H3_Rhizo_Litter_15 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003159	Avena fatua rhizosphere microbial communities - H3_Rhizo_Litter_14 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003162	Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_21 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003569	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Bulk_36 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003706	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A100I (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004100	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF244 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004115	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF216 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004116	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF206 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004131	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF232 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004132	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF240 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006934	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A1 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010061	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010062	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010067	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010072	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010073	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010084	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010089	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010110	Soil microbial communities from Illinois, USA to study soil gas exchange rates - BV-IL-AGR metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010114	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010137	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010856	Boreal forest soil eukaryotic communities from Alaska, USA - W4-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010857	Boreal forest soil eukaryotic communities from Alaska, USA - W1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010859	Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012224	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012371	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012391	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012400	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012403	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300019162	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019164	Soil microbial communities from Bohemian Forest, Czech Republic ? CSI3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019184	Soil microbial communities from Bohemian Forest, Czech Republic ? CSA2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019190	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZE3 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021315	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_2_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022498	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022499	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022500	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022503	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022522	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022527	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022530	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022718	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023537	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023662	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300023677	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026380	Metatranscriptome of enriched soil aggregate microbial communities from Iowa State University, Ames, United States - MC6-MC0909-MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300026392	Metatranscriptome of enriched soil aggregate microbial communities from Iowa State University, Ames, United States - MC6-MC0906-MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030626	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE110SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030811	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030824	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030831	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_141 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030834	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLA5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030873	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030885	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030905	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030917	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030937	Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A4_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300030978	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031024	Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLI6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031043	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031098	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_186 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031487	Metatranscriptome of soil surface biofilm microbial communities from soil inoculated with nitrogen-fixing consortium DG1, State College, Pennsylvania, United States - MICR_R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031677	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031866	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSU5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031891	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLA3 metaT (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300034447	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_119 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034479	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034663	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0005486J37273_1020221	3300002653	Forest Soil	MPFGIKAFGQFSLPEVHLRKTPDFLSLPVARLHINDDDRGSTFQVRYVSRGSLFS
Ga0005474J37262_1003511	3300002659	Forest Soil	MPFGIKAFGQFSLPEVHLRKTPDFPSLPVARLHINDDDRGSTFQVRYVSRGSLFSVN
Ga0005456J37224_1008631	3300002662	Forest Soil	MPFGIKAFGQFSLPEVHLRKTPDFLSLPVARLHINDDDRGSTFQVRYVSRGSLFSVNL
Ga0005480J37268_1001351	3300002673	Forest Soil	MPFGIKAFGQFSLPEVHLRKTPDFLSLPVARLHINDDDHGSTFQVRYVSRGSLFSVNL
Ga0006772J43183_1144481	3300002866	Avena Fatua Rhizosphere	MPLWIEAFSRFSIPEAHHHKPPDFPSLPVARLQFNDDSRGSTFRVRYVLRGSLFP
Ga0006771J45828_1039001	3300003159	Avena Fatua Rhizosphere	MPLRIGAFSRFGSLQVHLRKMPDLLSLPAARLHLNDDGFGSMFQVRYIPRGSLFP*
Ga0006778J45830_10170341	3300003162	Avena Fatua Rhizosphere	MPLRIGAFSRFGSLQVHLRKMPDLLSLPAARLHLNDDGFGSMFQVRYIPRGSLFP
Ga0007420J51693_10130551	3300003569	Avena Fatua Rhizosphere	MPLRIGAFSRFGSLQVHLRKMPDLLSLPAARLHLNDDGFGSMFQVRYIPRGSLGG
Ga0008095_1000731	3300003706	Tropical Rainforest Soil	MPFRIVAFSRFSLPEAQPFETPDSPSLPVARPHFKNDDRRGSTFQVRYVPPGSLLP
Ga0058904_10042721	3300004100	Forest Soil	MPFGIKAFSQFSLPEVHLHKPPDSPSLPVARLHIMKNGRGSTFQVRYVLRDPLF
Ga0058890_1055651	3300004115	Forest Soil	MPFGIKAFGQFSLPEVHLRKTPDFLSLPVARLHINDDDHGSTFQVRYVSRGSLFSEIG
Ga0058885_10011441	3300004116	Forest Soil	MPFGIEAFGQFSLPEVHLRKTPGFPSLPVGQTHYYDDGHGSMFQVRYVSRGSLFS
Ga0058898_12145151	3300004131	Forest Soil	MPLQIVVFNQFSLPEAHLCRTPDFPSLPVARLHFLSDDGLGSTFQIRYVPPGSLFP
Ga0058902_10129671	3300004132	Forest Soil	MPFQIKAFGQFSLPEVHLRKTPDFPSLPVARLHIIDDGHGSTFQVRYVSRDSLFSMN
Ga0058902_10261172	3300004132	Forest Soil	MPFGIKAFSQFSLPEVHLRKIPDFPSLPVARLHFIDDGRGSMFQVRYIPRGSLF
Ga0074470_116930302	3300005836	Sediment (Intertidal)	RIGAFSRFRSPQAHLRKSPDFPSLPAARLHVNDDGLGSMFQVRYVLRGSLFP*
Ga0080680_12246801	3300006934	Tropical Rainforest Soil	MPLRLKAFNRLRPSQARLHKSPDFLSLPAARLHINDDSLGSMFQVRYVLRGSL
Ga0127462_1736051	3300010061	Grasslands Soil	MPLRIRAFSRFGSPQAHLRKSPDFLSLPAAGLHLTDVGFGSMFQVRYVLRGSLF
Ga0127426_1376901	3300010062	Grasslands Soil	MPLRISAFSRLSSPQAHLCKPPDFPSLPEARLHVLDDDGLGSVFQVRYALPGSM
Ga0127432_1194801	3300010067	Grasslands Soil	MPLRISAFSRLSSPQAHLCKPPDFPSLPEARLHVLDDDGLGSVFQVRYALPGSL
Ga0127428_1528471	3300010072	Grasslands Soil	MPLRISAFSRLNSPQAHLCKPPDFPSLPEARLHVLDDDGLGSVFQVRYALPGSL
Ga0127429_1417311	3300010073	Grasslands Soil	MPFRIKAFNRFGYPRAHLRKSPDFLSLPAARLQINDDGRGSMFQVRYVLRGSLF
Ga0127461_10062692	3300010084	Grasslands Soil	MPVRIGAFSQFSLPEAHLRKPPDFLSLPVGQTPYNDDGHRSMFQVRYVPRGSLF
Ga0127454_11006881	3300010089	Grasslands Soil	MPLKIIAFNQSSLPEAHLRKPPDLPSLPVARLQLNDASRGSTFRVRYVLRDS
Ga0126316_11392141	3300010110	Soil	MPLWLDAFNQLSSSQAHLRKPPDFLSLPAARLQINDDGVGSMLQVRYVLRGSLFP
Ga0127460_10906731	3300010114	Grasslands Soil	MPLWLVAFNWFSLPKAHLRKPPDFPSLPVARLHFNDDGRGSTFQVRYVPRGSL
Ga0126323_11369811	3300010137	Soil	MPLRIIVFSRFSLLKAHLRKPPDFPSLPVARLQLNDDGRGSTFQVRYVPRGSLFPC
Ga0126323_12092831	3300010137	Soil	MPLWLKAFSRFSPPEAHLRKSPDFPSLPVANSILNDDGRGSTFRVRFASLGSLFP
Ga0126320_11109731	3300010146	Soil	MPLRIIAFSLFSPLIAHLRKPPDFPSLPVARLHLNDADRGSTFQVRYVPRGSLFPCT
Ga0126319_11567221	3300010147	Soil	MPVRIAAFSQFSLPEAHLRLTPDFLSLPVGQTPYNDDGHRSMFQVRYVPRGSLF
Ga0126358_11625111	3300010856	Boreal Forest Soil	MPLQIAVFSRSSLLKAHLRKPPDFPSLPVARLHLHDDGRGSTFQVRYVPRGSLFP
Ga0126354_12638491	3300010857	Boreal Forest Soil	MPLQISAFSRLGSPKTHLRKSPDFLSLPAARLQLNDDGLGSMFLVRYVLRGSLFP
Ga0126352_10443621	3300010859	Boreal Forest Soil	MPFGIKAFSQFSLPEVHLRKTPDFPSLPVARLHFIDDGRGSMFQVRYVLRGSLFSVNL
Ga0126351_11634301	3300010860	Boreal Forest Soil	MPFRIKAFSQFSSPEVHLREMPDFPSLPAARLHFHDDGHGSTFQVRYIPRGSFSS
Ga0150983_135945201	3300011120	Forest Soil	MPVRIAAFSQFSLPEAHLRLTPDFLSLPVGQTPYNDDGHRSMFQVRYVPRGSLFP
Ga0150985_1002296451	3300012212	Avena Fatua Rhizosphere	MPLRISAFSRLSSPQAHLCKPPDFPSLPEARLHVLDDDGLGSVFQVRYALPGSLLP
Ga0150985_1187502902	3300012212	Avena Fatua Rhizosphere	MPLRIIAFSLFSPLIAHLRKPPDFPSLPVARLHLNDADRGSTFQVRYVPRGSLFP
Ga0134028_10270761	3300012224	Grasslands Soil	MPLWIEAFSRFSIPEAHHHKPPDFPSLPVARLQFNDDSRGSTFRVRYVLRGSLF
Ga0134027_10761391	3300012364	Grasslands Soil	MPLRIVAFNQSSLPEAHLRKPPDLPSLPVARLQLNDASRGSTFQVRYVLRDSLFP
Ga0134022_10010101	3300012371	Grasslands Soil	MPLRIVAFNQSSLPEAHLRKPPDLPSLPVARLQLNDASRGSTFQVRYVLRDSLF
Ga0134035_10310551	3300012391	Grasslands Soil	MPLRISAFSRLSSPQAHLCKPPDFPSLPEARLHVLDDDGLGSVFQVRYALPGSLL
Ga0134052_11292301	3300012393	Grasslands Soil	MPLKIIAFNQSSLPEAHLRKPPDLPSLPVARLQLNDASRGSTFRVRYVLRDSLFP
Ga0134051_12255821	3300012398	Grasslands Soil	MPLRISAFSRLSSQQAHLCKPPDFPSLPEARLHVLDDDGLGSVFQVRYALPGSL
Ga0134048_12387121	3300012400	Grasslands Soil	MPLRISAFSRLNSPQAHLCKPPDFPSLPEARLHVLDDDGLGSVFQVRYALPGSLL
Ga0134055_10596842	3300012401	Grasslands Soil	MPVRIGAFSQFSLPEAHLRKPPDFLSLPVGQTPYNDDGHRSMFQVRYVPRGSLFP
Ga0134055_11014221	3300012401	Grasslands Soil	MPLRIIVFSRLSLLKAHLRKPPDFPSLPVARLQLNDDGRGSTFQVRYVPRGSLFPC
Ga0134059_10470221	3300012402	Grasslands Soil	MPFRIKAFNRFGYPRAHLRKSPDFLSLPAARLQINDDGRGSM
Ga0134049_12817581	3300012403	Grasslands Soil	MPLRIRAFSRFGSPQAHLRKSPDFLSLPAAGLHLTDVGFGSMFQVRYVLRGSL
Ga0150984_1013438021	3300012469	Avena Fatua Rhizosphere	VFNRFSLPKAHLREPPDFPSLPVARLQLNVDSLGSTFQVRYVPPGSLVR
Ga0150984_1123942441	3300012469	Avena Fatua Rhizosphere	MPLRIKAFSRFSSPQAHLRNPPDFPSLPVARLHVNDDGLGSMFQDRYVLRGSLL
Ga0184597_1009381	3300019162	Soil	MPFGIKAFGQLSLPEVHLRKTPDFPSLPVARLHIIDDDRGSTFQVRYVSRGSLFP
Ga0184582_1023631	3300019164	Soil	MPFGIKAFGQFSLPEVHLRKTPDFPSLPVARLHVNDDDRGSTFQVRYVSRGSLFS
Ga0184590_1303752	3300019184	Soil	MPFGIKAFGQFSLPEIHLRKTPDFPSLPVARLHINDDDRGSTFQVRYVSRGSLFS
Ga0184600_1022171	3300019190	Soil	MPFGIKAFGQFSLPEVHLRKTPDFPSLPVARLHVNDDDRGSTFQVRYVSRGSLFSV
Ga0184645_12405141	3300019233	Groundwater Sediment	MPVRIEAFSQFSLPEAHLRKPPDFPSLPVGQTPYNDDGHRSMFQVRYVPRGSLFP
Ga0184646_13313411	3300019259	Groundwater Sediment	MPLRIGAFSKLGSPKTHLRKSPDFLSLPAARLQLNDDGLGSMFLVRYVLRGSLFP
Ga0184644_16073151	3300019269	Groundwater Sediment	MPVRIEAFSQFSLPEAYLRKPPDFPSLPVVQTPYNDDGHRSMFQVRYVPRGSLFP
Ga0184642_12350141	3300019279	Groundwater Sediment	MPLRIGAFSKLGSPKTHLRKSPDFLSLPAAQLQLNDDGLGSMFLVRYVLRGSLFP
Ga0206350_110259281	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MPLWLDAFNQLSSSQAHLRKPPDFLSLPAARLQINDDGVGSMLQVRYVLRGSLF
Ga0154015_10576651	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	MPLRIAAFSRFSLSKAHQRKPPDFPSLPAARLQLNDAGLGSTFQVRYVPRGSLFPCT
Ga0179584_11106731	3300021151	Vadose Zone Soil	MPLRIIVFSRFSLLKAHLRKPPDFPSLPVARLQLNDDGRGSTFQVRYVPRGSLF
Ga0179584_11166591	3300021151	Vadose Zone Soil	MPLRISAFSRLGSPKTHLRKSPDFLSLPAAGLHLIDVGLGSMFLVRYVLRGSLFP
Ga0179584_13179371	3300021151	Vadose Zone Soil	MPLWISAFSRLGSSKTHLRKSPDFLSLPAARLQLNDDGLGSMFLVRYVLRGSLFP
Ga0179958_12065501	3300021315	Vadose Zone Soil	MPLRIRAFSRFGSPQAHLRKSPDFLSLPAAGLHLTDVGFGSMFQVRYVLRGSLFP
Ga0242644_10462322	3300022498	Soil	MPFGIKAFSQFSLPEVHLRKIPDFPSLPVARLHFIDDDRGSMFQIRYISRGPLCS
Ga0242644_10462981	3300022498	Soil	MPFRIKAFGQFSLPEVHLRKTPDFPSLPAARLHIIDDGHGSTFQVRYVSRDSLFSMN
Ga0242644_10463872	3300022498	Soil	MPFGIKAFSQFSLPEVHLREIPDFPSLPVAKLHIIDAGRGSMFQVRYVSRGPLFS
Ga0242641_10493822	3300022499	Soil	MPFGIKAFSQFSLPEVHLHKTPDFPSLPAARLHFIDASYGSTFQVRYVSQGSLLS
Ga0242643_1246872	3300022500	Soil	MPFRIKAFGQFSLPEVHLRKTPDFPSLPAARLHIIDDGHGSTFQVRYVSRDSLFS
Ga0242650_10268451	3300022503	Soil	MPFRIKAFSRFRFPETHLHKPPDFPSLPVARLHLIDDYHGSTFQVRYVLRDSLFP
Ga0222728_10466821	3300022508	Soil	MPFGIKAFSQFSLPEVHLREIPDFPSLPVARLHFIDDGRGSMFQVRYIPRGSLFS
Ga0242659_11446111	3300022522	Soil	MPFGIKAFSHFSLPEVHLHKTPDFPSLPAARLHFIDASHGSTFQVRYVLRGSLLS
Ga0242663_10866471	3300022523	Soil	MPFGIKAFSQFSPPEVHLRKIPDFPSLPVARLHFIDDGRGSMFQIRYISRGPLMHSSN
Ga0242664_10702741	3300022527	Soil	MPFGIKAFSQFSLPEVHLREIPDFPSLPVARLHFIDDGRGSTFQVR
Ga0242658_10557991	3300022530	Soil	MPFGIKAFSQFSLPEVHLHKTPDFPSLPAARLHFIDASYGSTFQVRYVS
Ga0242662_103264081	3300022533	Soil	MPFRIKAFSRFRFPETHLHKPPDFPSLPVARLHLIDDYHGSTFQVRYVLRDSLF
Ga0242662_103455811	3300022533	Soil	MPLQISAFSRLGSPKTHLRKSPDFLSLPAARLQLNDDGLGSMFLVRYVLRGSLF
Ga0242670_10815761	3300022708	Soil	MPLQISAFCRLGSPKTHLRKSPDFLSLPAARLQLNDDGLGSMFLVRYVLRGSLF
Ga0222756_10425152	3300022709	Soil	MPFGIKAFGQFSLPEVHLRKTPDFLSLPVARLHINDDDRGSTFQVRYVSRGSLFSVNLLE
Ga0242674_10737721	3300022711	Soil	MPFGIKAFGQFSLPEVHLRNTPDFLSLPVARLHINDDDHGSTFQVRYVSRGPLF
Ga0242675_11358171	3300022718	Soil	MPVRIAAFNQFSLPEAHLRLTPDFLSLPVGQTPYNDDGHRSMFQVRYVPRGSLF
Ga0242665_103956442	3300022724	Soil	MPFGIKAFSQFSLPEVHLHKTPDFPSLPAARLHFIDASYGSTFQVRYVSRGSLLSMN
Ga0247541_1017622	3300023537	Soil	MPFGIKAFGQFSLPEVHLRKTPDFPSLPVARLHVNDDDRGSTFQVRYVSRGSLFSVN
Ga0247545_1059091	3300023662	Soil	MPFGIKAFGQLSLPEVHLRKTPDFPSLPVARLHIIDDDRGSTFQVRYVSRGSLF
Ga0247543_1065062	3300023677	Soil	MPFGIKAFGQLSLPEVHLRKTPDFPSLPVARLHINDDDRGSTFQVRYVSRGSLFS
Ga0213910_1275661	3300026380	Enriched Soil Aggregate	MPFQIKAFSRLGYPLAHLRRSPDFPSLPAARLQINDDGHGSMFQVRYVLRGSLF
Ga0213910_1284101	3300026380	Enriched Soil Aggregate	MPLWLDAFNQLSSSQAHLRKPPDLLSLPAARLQINDDGVGSMLQVRYVLRGSL
Ga0213908_1394371	3300026392	Enriched Soil Aggregate	MPFQIKAFSRLGYPLAHLRRSPDFPSLPAARLQINDDGHGSMFQVRYVLRGSLS
Ga0210291_113591711	3300030626	Soil	MPFGIKAFGQFSLPEVHLRKTPDFPSLPVARLHINDDDRGSTFQVRYVSRGSLFSVNLL
Ga0265763_10559572	3300030763	Soil	MPFRIKAFGQFSLPEVHLRKTPDFPSLPVARLHIIDDGRGSTFQVRYVSRDSLFS
Ga0265735_1089971	3300030811	Soil	MPFGIKAFSQFSLPEVHLRKTPDFPSLPVARLHIIDDDRGSTFQVRYVSRGSLFSV
Ga0265726_1073071	3300030824	Soil	MPFQIKAFGQFSLPEVHLRKTPDFPSLPVARLHIIDDGHGSTFQVRYVSRDSLF
Ga0308203_10962231	3300030829	Soil	MPLRIGAFSKLGSPKTHLRKSPDFLSLPAARLQLNDDGLGSMFLVRYVLRGSLF
Ga0308152_1162722	3300030831	Soil	MPLQIVAFSLFSLPKAHLRKPPDFPSLPVARLHLNDDDRGSTFQVRYVPRGSLF
Ga0265738_1070502	3300030834	Soil	MPFQIKAFGQFSLPEVHLRKTPDFPSLPVARLHIIDDGRGSTFQVRYVSRDSLFS
Ga0265751_1170061	3300030873	Soil	MPFGIKAFSQFSLPEVHLRKTPDFPSLPVARLHIIDDDRGSTFQVRYVSRGSLFS
Ga0265743_1220882	3300030885	Soil	MPFRIKAFGQFSLPEVHLRKTPDFPSLPVARLHIIDDGHGSTFQVRYVSRDSLFS
Ga0308202_11636951	3300030902	Soil	MPLQIAAFSRSSLLKAHLRKPPDFPSLPVARLHLHDDGRGSTFQVRYVPRGSLF
Ga0308202_11647011	3300030902	Soil	MPVRIEAFSQFSLPEAHLRKPPDFPSLPVGQTPYNDDGHRSMFQVRYVPRGSLF
Ga0308198_11014861	3300030904	Soil	MPLRISAFNPFSLLKAHLRKPPDFPSLPVARLHLNVDDRGSTFQVRYVPRGSLFP
Ga0308200_11800381	3300030905	Soil	VPLGITAFGRFGSPQAHLRKSPDFPSLPVARLQINDDGRGSMFQVRYVLRGSLFP
Ga0075382_117693401	3300030917	Soil	MPLWLSAFCRLGSPKTHLRKSPDFLSLPAARLQLNDDGLGSMFLVRYVLRGS
Ga0138302_13374911	3300030937	Soil	MPFGIKAFSQFSLPEVHLRKSPDFLSLPAARLHVMKNGRGSTFQVRYVLRGPLF
Ga0265757_1118862	3300030978	Soil	MPFQIKAFGQFSLPEVHLRKTPDFPSLPVARLHIIDDGHGSTFQVRYVSRDSLFS
Ga0308183_12204742	3300030988	Soil	MPLQIIAFSLFSLPKAHLRKPPDFPSLPVARLHLNDDDRGSTFQVRYVPRGSLF
Ga0308178_11605682	3300030990	Soil	MPLQIIAFSLFSLPKAHLRKPPDFPSLPVARLHLNDDDRGSTFQVRYVPRGSLFP
Ga0308190_11995991	3300030993	Soil	VPLGITAFGRFGSPQAHLRKSPDFPSLPVARLQINVDGRGSMFQVRYVLRGSLF
Ga0265724_1054111	3300031024	Soil	MPFGIKAFSQFSLPEVHLRKTPDFPSLPVARLHINDDDRGSTFQVRYVSRGSLFS
Ga0265779_1141201	3300031043	Soil	MPLQITAFRRFGSPEVHLRNSPDFPSLPVARLHIIDDGHGSTFQVRYVSRGSLFSGSE
Ga0265760_103765872	3300031090	Soil	MPFGIKAFSQFSLPEVHLRKTPDFPSLPVARLHINDDDRGSTFQVRYVSRGSLFSVN
Ga0308193_10963541	3300031096	Soil	MPLRISAFSPFSLLKAHLRKPPDFPSLPVARLHLNDDDRGSTFQVRYVPRGSLF
Ga0308191_10400081	3300031098	Soil	MPVRIEAFSQFSLPEAHLRKPPDFPSLPVGQTPYNDDGHRSMFQV
Ga0170824_1026407391	3300031231	Forest Soil	MPLRISAFSRLGSPKTHLRKSPDFLSLPGARLQLNDDGSGSMFLVRYVLRGSLF
Ga0170824_1084514511	3300031231	Forest Soil	MPVRIAAFSQFSLPEAHLRLTPDFLSLPVGQTPYNDDGHRSMFQVRYVPRGSLFPCTS
Ga0170824_1085728952	3300031231	Forest Soil	MPFRIKAFNRFRYPRAHLRRSPDLPSLPAARLQVNDDGRGSMFQVRYVLRGSLFP
Ga0170824_1102092171	3300031231	Forest Soil	MPFQIKAFSRFGYPLAHLRRSPDFPSLPAARLHINDDGRGSMFQVRYVLRGSLFP
Ga0170824_1193675621	3300031231	Forest Soil	MPLWLSAFCRLGSPKTHLRKSPDFLSLPAARLQLNDDGLGSMFLVRYVLRGSLF
Ga0308194_103989081	3300031421	Soil	MPLRIGAFSKLGSPKTHLRKSPDFLSLPAARLQLNDDGLGSMFLVRYVLRGSL
Ga0170820_131040611	3300031446	Forest Soil	MPFRIKAFNRFGYPRVHLRRSPDLPSLPAARLQVNDDGRGSMFQVRYVLRGSLF
Ga0170819_154978501	3300031469	Forest Soil	MPLWLSAFSRLGSPKTHLRKSPDFLSLPAARLQLNDDGLGSMFLVRYVLRG
Ga0170819_158203081	3300031469	Forest Soil	MPFRIKAFSRFGHPRAHLRRSPDFPSLPAARLQINDDGRGSMFQVRYVLRGSLFP
Ga0170818_1001257561	3300031474	Forest Soil	MPFRIKAFNRFGYPRVHVRRSPDLPSLPAARLQVNDDGRGSTFQVRYVLRGSLFP
Ga0170818_1064659111	3300031474	Forest Soil	MPLWLSAFCRLGSPKTHLRKSPDFLSLPAARLQLNDDGLGSMFLVRYVLRG
Ga0170818_1141330571	3300031474	Forest Soil	MPFQIKAFSRFGYPLAHLRRSPDFLSLPAARLHINDDGRGSMFQVRYVLRGSL
Ga0314823_1137691	3300031487	Soil	MPLQIKAFSRFSFPQAHLRNPPDFPSLPVARLHVNDDDLGSLFQVRYVLRGS
Ga0307480_10236632	3300031677	Hardwood Forest Soil	MPLQIKAFSLFSLPKAHLRKPPDFPSLPVARLHLNDDDRGSTFQVRYVLRGSLFP
Ga0307480_10240881	3300031677	Hardwood Forest Soil	MPFRIKAFNRLGYPRAHLRRSPDFLSLPAARLQVNDDGHGSMFQVRYVLRGSLFP
Ga0316049_1249211	3300031866	Soil	MPFGIKAFSQFSLPEVHLRKSPDFPSLPVARIHIMKNGLGSTFQVRYVLRDPLFP
Ga0316039_1195681	3300031891	Soil	MPFGIKAFGQLSLPEVHLRKTPDFPSLPVARLHVNDDDRGSTFQVRYVSRGSLFS
Ga0370544_23084_3_167	3300034447	Soil	MPLRISAFCRLGSPKTHLRKSPDFLSLPGTRLQLNDDGSGSMFLVRYVLRGSLFP
Ga0314785_024792_3_167	3300034479	Soil	MPFRIKAFNRFGYPLAHLRKSPDFLSLPAARLQINDDGRGSTFQVRYVLRGSLFP
Ga0314785_025317_339_503	3300034479	Soil	MPLRIAAFSPFSLLKAHLRKPPDFLSLPVARLQLNDDGRGSTFQVRYVPRGSLFP
Ga0314785_025774_336_500	3300034479	Soil	MPFQIKAFSRLGYPLAHLRRSPDFPSLPAARLQINDDGHGSMFQVRYVLRGSLFP
Ga0314780_218805_2_163	3300034659	Soil	MPLRIAAFSPFSLLKAHLRKPPDFLSLPVARLQLNDDGRGSTFQVRYVPRGSLF
Ga0314783_173809_3_167	3300034662	Soil	MPLWISAFSRFCSPQAHLRRSPDSLSLPVARLHVNDDSRGSMFQVRYVLRGSLLL
Ga0314784_168019_2_163	3300034663	Soil	MPLWISAFSRFCAPQAHLRKSPDFLSLPVARLHVNDDSRGSMFQVRYVLRGSLL
Ga0314792_271871_2_163	3300034667	Soil	MPFRIKAFNRFGYPLAHLRKSPDFLSLPAARLQINDDGRGSTFQVRYVLRGSLF
Ga0314793_161931_349_513	3300034668	Soil	MPFRIKAFNRFGYPLAHLRKSPDFLSLPAARLQINDDGHGSTFQVRYVLRGSLFP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055474

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences