Metagenome / Metatranscriptome Family F055600

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055600
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	73 residues
Representative Sequence	MRLLFAALATIAIGWGVVLAAPKPAPRRHGSKAAARRETAEQLCKAQGPNCRLVVPDAPRDLTGAGCVCDAEPARD
Number of Associated Samples	112
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	39.13 %
% of genes near scaffold ends (potentially truncated)	29.71 %
% of genes from short scaffolds (< 2000 bps)	73.19 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.551 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (28.985 % of family members)
Environment Ontology (ENVO)	Unclassified (44.203 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.348 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 33.65% β-sheet: 7.69% Coil/Unstructured: 58.65%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF01192	RNA_pol_Rpb6	43.48
PF14238	DUF4340	9.42
PF00166	Cpn10	5.80
PF00118	Cpn60_TCP1	3.62
PF09822	ABC_transp_aux	2.17
PF05643	DUF799	1.45
PF13586	DDE_Tnp_1_2	0.72
PF01648	ACPS	0.72
PF00498	FHA	0.72
PF00437	T2SSE	0.72
PF16068	DUF4810	0.72
PF11941	DUF3459	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG1758	DNA-directed RNA polymerase, subunit K/omega	Transcription [K]	43.48
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	5.80
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	3.62
COG4380	Uncharacterized conserved protein, DUF799 domain	Function unknown [S]	1.45

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.55 %
Unclassified	root	N/A	1.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.55 %
Unclassified	root	N/A	1.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.55 %
Unclassified	root	N/A	1.45 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	44.20 %
Unclassified	root	N/A	1.45 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	39.13 %
Unclassified	root	N/A	1.45 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	39.13 %
Unclassified	root	N/A	1.45 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.72 %

Name	Rank	Taxonomy	Distribution
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	36.96 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.45 %
Unclassified	root	N/A	1.45 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.72 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.72 %

Name	Rank	Taxonomy	Distribution
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	25.36 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.45 %
Unclassified	root	N/A	1.45 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.72 %
Salipiger	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger	0.72 %

Name	Rank	Taxonomy	Distribution
Anaeromyxobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae	24.64 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.45 %
Unclassified	root	N/A	1.45 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.72 %
Kitasatospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora	0.72 %
Salipiger bermudensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger → Salipiger bermudensis	0.72 %

Name	Rank	Taxonomy	Distribution
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	24.64 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.45 %
Unclassified	root	N/A	1.45 %
Hyalangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium	0.72 %
Kitasatospora setae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → Kitasatospora setae	0.72 %
Salipiger bermudensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger → Salipiger bermudensis	0.72 %

Name	Rank	Taxonomy	Distribution
Anaeromyxobacter dehalogenans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	8.70 %
unclassified Anaeromyxobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter	1.45 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.45 %
Unclassified	root	N/A	1.45 %
Hyalangium minutum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium → Hyalangium minutum	0.72 %
Kitasatospora setae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → Kitasatospora setae	0.72 %
Salipiger bermudensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger → Salipiger bermudensis	0.72 %

Name	Rank	Taxonomy	Distribution
Anaeromyxobacter dehalogenans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	8.70 %
Anaeromyxobacter sp. PSR-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter → Anaeromyxobacter sp. PSR-1	1.45 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.45 %
Unclassified	root	N/A	1.45 %
Hyalangium minutum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium → Hyalangium minutum	0.72 %
Kitasatospora setae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → Kitasatospora setae	0.72 %
Salipiger bermudensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger → Salipiger bermudensis	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100000539	All Organisms → cellular organisms → Bacteria → Proteobacteria	21368	Open in IMG/M
3300002557\|JGI25381J37097_1093531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger → Salipiger bermudensis	505	Open in IMG/M
3300002560\|JGI25383J37093_10140426	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300002908\|JGI25382J43887_10346969	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300003321\|soilH1_10219521	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4316	Open in IMG/M
3300003324\|soilH2_10036911	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	2503	Open in IMG/M
3300005167\|Ga0066672_10046544	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	2466	Open in IMG/M
3300005171\|Ga0066677_10048268	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2118	Open in IMG/M
3300005171\|Ga0066677_10192703	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1137	Open in IMG/M
3300005174\|Ga0066680_10790122	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300005176\|Ga0066679_10072827	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	2036	Open in IMG/M
3300005177\|Ga0066690_10118029	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	1719	Open in IMG/M
3300005179\|Ga0066684_10108581	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	1711	Open in IMG/M
3300005179\|Ga0066684_10263271	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1135	Open in IMG/M
3300005179\|Ga0066684_11034561	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300005179\|Ga0066684_11082714	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300005180\|Ga0066685_10772651	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	653	Open in IMG/M
3300005184\|Ga0066671_10151248	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1353	Open in IMG/M
3300005184\|Ga0066671_10632895	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300005186\|Ga0066676_10452234	Not Available	870	Open in IMG/M
3300005187\|Ga0066675_10197158	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300005338\|Ga0068868_102024320	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300005445\|Ga0070708_100169624	All Organisms → cellular organisms → Bacteria	2037	Open in IMG/M
3300005447\|Ga0066689_10043917	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	2364	Open in IMG/M
3300005454\|Ga0066687_10042769	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	2068	Open in IMG/M
3300005458\|Ga0070681_10207913	All Organisms → cellular organisms → Bacteria	1874	Open in IMG/M
3300005459\|Ga0068867_101231755	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005529\|Ga0070741_10022711	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	9590	Open in IMG/M
3300005530\|Ga0070679_100402354	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300005545\|Ga0070695_101031962	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300005552\|Ga0066701_10009440	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4366	Open in IMG/M
3300005561\|Ga0066699_10184779	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300005561\|Ga0066699_10195332	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	1407	Open in IMG/M
3300005568\|Ga0066703_10199657	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	1213	Open in IMG/M
3300005568\|Ga0066703_10811778	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005575\|Ga0066702_10053698	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	2175	Open in IMG/M
3300005576\|Ga0066708_10060355	All Organisms → cellular organisms → Bacteria	2151	Open in IMG/M
3300005587\|Ga0066654_10213487	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	1007	Open in IMG/M
3300005615\|Ga0070702_101260626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → Kitasatospora setae	598	Open in IMG/M
3300005719\|Ga0068861_100989386	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300006046\|Ga0066652_100030900	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3833	Open in IMG/M
3300006796\|Ga0066665_10064752	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2572	Open in IMG/M
3300006796\|Ga0066665_10714123	All Organisms → cellular organisms → Bacteria	793	Open in IMG/M
3300006800\|Ga0066660_10749296	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae → Hyalangium → Hyalangium minutum	797	Open in IMG/M
3300006800\|Ga0066660_10861537	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300006852\|Ga0075433_10138719	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	2161	Open in IMG/M
3300006871\|Ga0075434_100253995	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1777	Open in IMG/M
3300007255\|Ga0099791_10242600	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300007258\|Ga0099793_10067182	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300007265\|Ga0099794_10094186	All Organisms → cellular organisms → Bacteria → Proteobacteria	1489	Open in IMG/M
3300007265\|Ga0099794_10400258	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300007788\|Ga0099795_10171560	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300007788\|Ga0099795_10441615	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300009012\|Ga0066710_100586079	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1690	Open in IMG/M
3300009137\|Ga0066709_100123921	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter → Anaeromyxobacter sp. PSR-1	3237	Open in IMG/M
3300009137\|Ga0066709_103886122	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300009143\|Ga0099792_10641379	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300010320\|Ga0134109_10347473	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300010360\|Ga0126372_12200282	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300010399\|Ga0134127_12762296	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300010401\|Ga0134121_13250130	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300012203\|Ga0137399_10274728	All Organisms → cellular organisms → Bacteria → Proteobacteria	1387	Open in IMG/M
3300012203\|Ga0137399_10399833	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300012203\|Ga0137399_10629536	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300012205\|Ga0137362_10437647	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	1132	Open in IMG/M
3300012205\|Ga0137362_10544727	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	1002	Open in IMG/M
3300012361\|Ga0137360_11086104	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300012410\|Ga0134060_1413620	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300012469\|Ga0150984_108868816	Not Available	775	Open in IMG/M
3300012582\|Ga0137358_10058158	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	2584	Open in IMG/M
3300012582\|Ga0137358_10136167	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300012683\|Ga0137398_10023308	All Organisms → cellular organisms → Bacteria	3399	Open in IMG/M
3300012685\|Ga0137397_10005119	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	9073	Open in IMG/M
3300012685\|Ga0137397_10189287	All Organisms → cellular organisms → Bacteria	1530	Open in IMG/M
3300012685\|Ga0137397_10607638	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	813	Open in IMG/M
3300012918\|Ga0137396_11008880	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300012922\|Ga0137394_10333777	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300012922\|Ga0137394_10700071	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300012922\|Ga0137394_11187136	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300012929\|Ga0137404_10360348	All Organisms → cellular organisms → Bacteria	1275	Open in IMG/M
3300012929\|Ga0137404_12176473	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300012930\|Ga0137407_11536019	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300012944\|Ga0137410_10463026	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	1031	Open in IMG/M
3300012944\|Ga0137410_12074655	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300012972\|Ga0134077_10331472	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300012977\|Ga0134087_10245187	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300014150\|Ga0134081_10123167	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300014157\|Ga0134078_10026249	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1879	Open in IMG/M
3300014166\|Ga0134079_10474443	All Organisms → cellular organisms → Bacteria	598	Open in IMG/M
3300015245\|Ga0137409_10032818	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	5020	Open in IMG/M
3300017930\|Ga0187825_10199766	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300018027\|Ga0184605_10199437	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	908	Open in IMG/M
3300018032\|Ga0187788_10366424	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300018061\|Ga0184619_10021296	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	2666	Open in IMG/M
3300018431\|Ga0066655_10095477	All Organisms → cellular organisms → Bacteria → Proteobacteria	1654	Open in IMG/M
3300018433\|Ga0066667_10041149	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	2704	Open in IMG/M
3300018433\|Ga0066667_10070288	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	2210	Open in IMG/M
3300018468\|Ga0066662_10069743	All Organisms → cellular organisms → Bacteria	2348	Open in IMG/M
3300019789\|Ga0137408_1222707	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	3621	Open in IMG/M
3300020199\|Ga0179592_10516302	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300024330\|Ga0137417_1079275	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	2063	Open in IMG/M
3300025927\|Ga0207687_11840755	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300026023\|Ga0207677_10797671	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300026089\|Ga0207648_10368072	All Organisms → cellular organisms → Bacteria	1298	Open in IMG/M
3300026295\|Ga0209234_1097162	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300026296\|Ga0209235_1000036	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	49005	Open in IMG/M
3300026300\|Ga0209027_1008449	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	3880	Open in IMG/M
3300026301\|Ga0209238_1164303	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300026322\|Ga0209687_1012709	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → Anaeromyxobacter dehalogenans	2790	Open in IMG/M
3300026328\|Ga0209802_1076633	All Organisms → cellular organisms → Bacteria	1564	Open in IMG/M
3300026330\|Ga0209473_1108764	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	1155	Open in IMG/M
3300026331\|Ga0209267_1129137	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300026332\|Ga0209803_1259863	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300026335\|Ga0209804_1128081	All Organisms → cellular organisms → Bacteria → Proteobacteria	1149	Open in IMG/M
3300026523\|Ga0209808_1053491	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	1832	Open in IMG/M
3300026523\|Ga0209808_1057587	All Organisms → cellular organisms → Bacteria	1744	Open in IMG/M
3300026524\|Ga0209690_1019081	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	3492	Open in IMG/M
3300026527\|Ga0209059_1223012	All Organisms → cellular organisms → Bacteria	632	Open in IMG/M
3300026548\|Ga0209161_10031513	All Organisms → cellular organisms → Bacteria	3651	Open in IMG/M
3300026557\|Ga0179587_10034199	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	2842	Open in IMG/M
3300026557\|Ga0179587_10173859	All Organisms → cellular organisms → Bacteria	1353	Open in IMG/M
3300027643\|Ga0209076_1008912	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	2525	Open in IMG/M
3300027655\|Ga0209388_1104693	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300027667\|Ga0209009_1179504	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300027671\|Ga0209588_1044536	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300027671\|Ga0209588_1132577	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300027678\|Ga0209011_1005833	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	4233	Open in IMG/M
3300027727\|Ga0209328_10033357	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	1584	Open in IMG/M
3300027748\|Ga0209689_1112135	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M
3300027903\|Ga0209488_10614796	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300028828\|Ga0307312_10205737	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	1265	Open in IMG/M
3300031720\|Ga0307469_10906307	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300031820\|Ga0307473_10093540	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter → Anaeromyxobacter sp. PSR-1	1579	Open in IMG/M
3300032180\|Ga0307471_100215657	All Organisms → cellular organisms → Bacteria	1937	Open in IMG/M
3300032770\|Ga0335085_10029932	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	7606	Open in IMG/M
3300032782\|Ga0335082_10181511	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	2013	Open in IMG/M
3300033433\|Ga0326726_10231725	All Organisms → cellular organisms → Bacteria → Proteobacteria	1714	Open in IMG/M
3300033513\|Ga0316628_102165498	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.48%
Host-Associated	Host-Associated	6.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.30%
Plants	Host-Associated → Plants	6.52%
Aquatic	Environmental → Aquatic	2.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.90%
Sediment	Environmental → Aquatic → Sediment	1.45%
Freshwater	Environmental → Aquatic → Freshwater	0.72%
Peat	Environmental → Terrestrial → Peat	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.71%
Loam	Environmental → Terrestrial → Soil → Loam	7.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	39.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.45%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.45%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	28.99%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	28.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.14%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.07%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.17%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.45%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.45%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.45%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.72%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_10000053916	3300002245	Forest Soil	MKLLAGALLTVAIGWAVVLAAPKPVRRPRLAKPARIETAEQICKAQGPTCRVVVRPDAPRDLTGVGCECK*
JGI25381J37097_10935311	3300002557	Grasslands Soil	MRLLLAAVATIAIGWGVVLAAPKPAPRPHGSKAAARRATAEQLCKAQGPTCRLIVRPDAPRDPAGAGCVCDVEPARD*
JGI25383J37093_101404262	3300002560	Grasslands Soil	MRLFFAALATIAIGWGVVLAAPKPVPRRHGSKAAARRATAEELCKAQGPSCRLIVPPDAPRDLTGAGCVCDVEPARD*
JGI25382J43887_103469692	3300002908	Grasslands Soil	MRLLLAAVATIAIGWGVVLAAPKPAHRHVSKAAARRANAEQLCKAQGPNCRLVVRPDAPQDLTGAGCVCDEARRD*
soilH1_102195214	3300003321	Sugarcane Root And Bulk Soil	MRLLLTALLTLAIGWGVVLASPKPPARKHSKAADRRATAEQMCKQQGPNCRLLIRPEAPRDLTGAACVCD*
soilH2_100369112	3300003324	Sugarcane Root And Bulk Soil	MRLLLTALLTLAIGWGVVLASPKPPARKHSRAADRRATAEQICKQQGPNCRLVIKPEAPRDLTGAACVCD*
Ga0066672_100465444	3300005167	Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRHGSKAAARRETAEQLCKAQGPNCRLVVGAGAPRDLTGAGCVCEAEPARD*
Ga0066677_100482683	3300005171	Soil	LAAVATIAIGWGVVLAAPKPAPRPHGSKAAARRATAEQLCKAQGPTCRLIVRPDAPRDPAGAGCVCDVEPARD*
Ga0066677_101927033	3300005171	Soil	MKLLLGALLTVAIGWGVVLAAPTPVRRHASKAAARRANAEQLCKAQGANCRLVVRPDAPQDLTGAGCVCEMEPTRD*
Ga0066680_107901221	3300005174	Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRHGSKAAARRETAEQLCKAQGPNCRLVVPDAPRDLTGAGCVCDAEPARD*
Ga0066679_100728271	3300005176	Soil	MRLLLAAVATIAIGWGVVLAAPKPAPRPHGSKAAARRATAEQLCKAQGPTCRLIVRPDAPRD
Ga0066690_101180293	3300005177	Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRHGSKAAARRETAEQLCKAQGPNCRLVVGAGAPRDLTGAG
Ga0066684_101085811	3300005179	Soil	LTVAIGWGVVLAAPTPVRRHASKAAARRANAEQLCKAQGANCRLVVRPDAPQDLTGAGCVCEMEPTRD*
Ga0066684_102632712	3300005179	Soil	MRLLLGALLTVAIGWGVVLAAPKPARRHGSKVAARREAAERLCKAQGPTCKLVVRPDAPQDLTGAGCVCETEPTRD*
Ga0066684_110345612	3300005179	Soil	PMRLLFAALATIAIGWGVVLAAPKPAPRRHGSKAAARRETAEQLCKAQGPKCRLVVRPDAPLDLTGAGCVCGAEPARD*
Ga0066684_110827142	3300005179	Soil	PMRLLFAALATIAIGWGVVLAAPKPAPRRHGSKAAARREIAEQLCKAQGPNCRLVVGAGAPRDLTGAGCVCEAEPARD*
Ga0066685_107726512	3300005180	Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRQWSKAAARRETAEQLCKAQGPKCRLVVRPDAPLDLTGAGCVCGAEPARD*
Ga0066671_101512483	3300005184	Soil	GALLTVAIGWGVVLAAPTPVRRHASKAAARRANAEQLCKAQGANCRLVVRPDAPQDLTGAGCVCEMEPTRD*
Ga0066671_106328952	3300005184	Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRHGSKAAARRETAEQLCKAQGPSCRLVVGAGAQRDPTGAGCICEAEP
Ga0066676_104522342	3300005186	Soil	IMRLLLGALLTVAIGWGVVLAAPKPVRRPRAARMQQQARRDTAEQICKAQGANCKLAVRPDAPRDFSGAGCVCE*
Ga0066675_101971581	3300005187	Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRHGSKAAARRETAEQLCKAQGPNCRLVVGAGAPRDPTGAGCICEAEPARD*
Ga0068868_1020243201	3300005338	Miscanthus Rhizosphere	MKLLMAALVTVAIGWAVVLAAPKPAQGRFASRAAARRAKAEQICKSQGDTCRLIVRPDAPKDLTGAACACDETRD*
Ga0070708_1001696242	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VAAGQTIMRLLLGALLTVAIGWGIVLAAPKPVRRPRAPKQQQARRDTAEQICKAQGANCRVVVGPDAPRDFSGAGCICE*
Ga0066689_100439173	3300005447	Soil	MRLLLAAVATIAIGWGVVLAAPKPAHRHVSKAAARRANAEQLCKAQGPSCRLIVPPDAPRDLTGAGCVCDVEPARD*
Ga0066687_100427693	3300005454	Soil	MRLLLAAVATIAIGWGVVLAAPKPAPRPHGSKAAARRATAEQLCKAQGPTCRLIVRADAPRDLAGAGCVCDVEPARD*
Ga0070681_102079132	3300005458	Corn Rhizosphere	MRLFLGALATLAIGWGVVLASPKPLPRKHVSRLAARKATAEQLCKSQGPTCKLVVRPDAPRDFTGAACICDQVASTATAQ*
Ga0068867_1012317552	3300005459	Miscanthus Rhizosphere	MKLLVAALVTVAIGWAVVLAAPKPAQGRFASRAAARRAKAEQICKSQGESCRLIVRPDAPKDLTGAACVCDETRD*
Ga0070741_100227119	3300005529	Surface Soil	MRLFLGALATLAIGWGVVLASPKPLPRKHVSKLAARKATAEQLCKSQGPTCKLVVRPDAPRDFTGAACVCDQVASTATPQ*
Ga0070679_1004023541	3300005530	Corn Rhizosphere	MRLFLGALATLAIGWGVVLASPKPLPRKHVSKFAARKATAEQLCKSQGPTCKLVVRPDAPRDFTGAACVCDQVASTATP*
Ga0070695_1010319621	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	AAPKPAQGRFASRAAARRAKAEQICKSQGESCRLIVRPDAPKDLTGAACVCDETRD*
Ga0066701_100094403	3300005552	Soil	MKLLLGALLTVAIGWGVVLAAPKPVRRHASKAAARRANAEQLCKAQGANCRLVVRPDAPQDLTGAGCVCEMEPTRD*
Ga0066699_101847793	3300005561	Soil	MRLVLGTLLTIAIGWGVVLAAPKPVRRHPSKAAARRANAEQLCKAQGANCKLVVRPDAPQDLTGAGCVCDPEPTRD*
Ga0066699_101953321	3300005561	Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRHGSKAAARRETAEQLCKAQGPNCRLVVGAGAPRDLTGAGCV
Ga0066703_101996571	3300005568	Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRHGSKAAARRETAEQLCKAQGPNCRLVVGAGAPRDLTGAGCVC
Ga0066703_108117781	3300005568	Soil	PDMKLLLGALLTVAIGWGVVLAAPKPVRRHASKAADRRANAEQLCKAQGANCRLVVRPDAPQDLTGAGCVCEMEPTGD*
Ga0066702_100536981	3300005575	Soil	MRLLLAAVATIAIGWGVVLAAPKPAPRPHGSKAAARRATAEQLCKAQGPTCRLIVRPDAPRDLAGAGCVCDVEPARD*
Ga0066708_100603554	3300005576	Soil	SGRPAMRLLFAALATIAIGWGVVLAAPKPAPRRQWSKAAARRETAEQLCKAQGPKCRLVVRPDAPLDLTGAGCVCDAEPARD*
Ga0066654_102134872	3300005587	Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRHGSKAAARRETAEQLCKAQGPSCRLVVGAGAPRDPTGARCICEAERARD*
Ga0070702_1012606261	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	GPWPGPHDPGRPGMKLLMAALVTVAIGWAVVLAAPKPAQGRFASRAAARRAKAEQICKSQGDTCRLIVRPDAPKDLTGAACVCDETRD*
Ga0068861_1009893861	3300005719	Switchgrass Rhizosphere	MKLLMAALVTVAIGWAVVLAAPKPAQGRFASRAAARRAKAEQICKSQGDTCRLIVRPDAPKDLTGAACVCDETRD*
Ga0066652_1000309004	3300006046	Soil	MRLLLGALLTIAIGWGVVLAAPKPVRHPHAARQQQQARRDTAEQLCKAQGANCKILVRPDAPNDFTGAGCVCE*
Ga0066665_100647521	3300006796	Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRQWSKAAARRETAEQLCKAQGPKCRLVVRPDAPLDLTGAGCVCGAEPAR
Ga0066665_107141232	3300006796	Soil	MKLLLGALLTVAIGWGVVLAAPKPVRRHASKAAARRANAEQLCKAQGTNCKLVVRPDAPQNLTGAGCVCETEPTRD*
Ga0066660_107492962	3300006800	Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRQWSKAAARRETAEQLCKAQGPKCRLVVRPDAPLDLTGAGCVCDAEPARD*
Ga0066660_108615372	3300006800	Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRHGSKAAVRRETAEQLCEAQGPNCRLVVPDAPRDLTGAGCVCEAEPARD*
Ga0075433_101387193	3300006852	Populus Rhizosphere	MRLLLAALLTVIVGWGVVLAAPKASARHRTGKPAARRETAEQMCKAQGPTCRVVARPEAPKDLTGLGCVCDPAVETGSAEAP*
Ga0075434_1002539951	3300006871	Populus Rhizosphere	VGWGVVLAAPKASARHRTGKPAARRETAEQMCKAQGPTCRVVARPEAPKDLTGLGCVCDPAVETGSAEAP*
Ga0099791_102426002	3300007255	Vadose Zone Soil	MKLFAGALLTVAIGWAVVLAAPKPVRRPRLAKPARIETAEQICKAQGPTCKVVVRPDAPRDLTGVGCECK*
Ga0099793_100671823	3300007258	Vadose Zone Soil	MKLLAGALLTVAIGWAVVLAAPKPARRPRLAKPARIETAEQICKAQGPTCKVVVRPDAPRDLTGVGCECK*
Ga0099794_100941862	3300007265	Vadose Zone Soil	MKLFAGALLTVAIGWAVVLAAPKPVRRPRLAKPARIETAEQICRAQGPTCKVVVRPDAPRDLTGVGCECK*
Ga0099794_104002582	3300007265	Vadose Zone Soil	MKLLAGALLTVAIGWAVVLAAPKPARRPRLAKPARIETAEQICKAQGPTCKVVVRPGAPRDLTGVGC
Ga0099795_101715603	3300007788	Vadose Zone Soil	TVAIGWGVVLAAPKPVRRPRAARTQQQARRDTAEQICKAQGANCKVAVRPDAPRDFAGAGCVCE*
Ga0099795_104416152	3300007788	Vadose Zone Soil	MKLLAGALLTVAIGWAVVLAAPKPVRRPRLAKPVQIETAEQICKAQGPTCKVLVRPDAPRDLTGVGCECK*
Ga0066710_1005860793	3300009012	Grasslands Soil	MKLLLGALLTVAIGWGVVLAAPKPVRRHASKAAARRANAEQLCKAQGTNCKLVVRPDAPQDLTGAGCVCEMEPTGD
Ga0066709_1001239213	3300009137	Grasslands Soil	MKLLLGALLTVAIGWGVVLAAPKPVRRHASKAAARRANAEQLCKAQGTNCKLVVRPDAPQDLTGAGCVCEMEPTGD*
Ga0066709_1038861222	3300009137	Grasslands Soil	ATIAIGWGVVLAAPKPAPRRHGSKAAARRETAEQLCKAQGPNCRLVVGAGAPRDLTGAGCVCEAEPARD*
Ga0099792_106413791	3300009143	Vadose Zone Soil	MRLLLGALLTVAIGWGVVLAAPKPVRRPRAARMQQQARRDTAEQICKAQGANCKVAVRPDAPRDFAGAGCVCE*
Ga0134109_103474731	3300010320	Grasslands Soil	MKLLLGALLTVAIGWGVVLAAPTPVRRHASKAAARRANAEQLCKAQGANCRLVVRPDAPQDL
Ga0126372_122002822	3300010360	Tropical Forest Soil	MRLLLGALLTIAIGWGIVLAAPKPVRRPRSVRTQQQQARRDTAEEICKAQGPTCKVAVRPDAPH
Ga0134127_127622961	3300010399	Terrestrial Soil	MKLLVAALVTVAIGWAVVLAAPKPAQGRFASRAAARRAKAEQICKSQGESCRLIVRPDAPKDL
Ga0134121_132501302	3300010401	Terrestrial Soil	MKLLMAALVTVAIGWAVVLAAPKPAQGRFASRAAARRAKAEQICKSQGETCRLIVRPDAPKDLTGAACVCDETRD*
Ga0137399_102747283	3300012203	Vadose Zone Soil	MKLLAGALLTVAIGWAVVLAAPKPVRRTRLAKPARIETAEQICKAQGPTCKVVVRPDAPRDLTGVGCECK*
Ga0137399_103998333	3300012203	Vadose Zone Soil	MRLLLGALLTVAIGWGVVLAAPKPVRRPRAARTQQQARRDTAEQICKAQGANCKVAVRQDAPRDFAGAGCVCE*
Ga0137399_106295362	3300012203	Vadose Zone Soil	MKLLAGALLTVAIGWAVVLAAPKPVRRPRLAKPVQIETAEQICKAQGPTCQVVVRPDAP
Ga0137362_104376472	3300012205	Vadose Zone Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRHGLRAAARRETAEQLCKAQGPNCRLVVPDAPRDLTGAGCVCDVEPARD*
Ga0137362_105447272	3300012205	Vadose Zone Soil	MKLLAGAILTVAIGWAVVLAAPKPVRRPRVAKPARIETAEQICKAQGPTCKVVVRPDAPRDLTGIGCECK*
Ga0137360_110861042	3300012361	Vadose Zone Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRHGSKAAARRETAEQLCKAQGPNCRLVVPDAPRDLTGAGCVCDVEPARD*
Ga0134060_14136202	3300012410	Grasslands Soil	GVVLAAPKPVPRRHGSKAAARRATAEELCKAQGPSCRLIVPPDAPRDLTGAGCVCDVEPARD*
Ga0150984_1088688161	3300012469	Avena Fatua Rhizosphere	LLTIAIGWGVVLAAPKPVRHPHAARQQQQARRDTAEQLCKAQGANCKILVRPDAPNDFSGAGCVCE*
Ga0137358_100581583	3300012582	Vadose Zone Soil	MKLLAGALLTVAIGWAVVLAAPTPVRRPRRAKPVQIETAEQICKAQGPTCKVLVRPDAPRDLTGVGCECK*
Ga0137358_101361672	3300012582	Vadose Zone Soil	MKLLAGALLTVSIGWAVVLAAPKPARRPRLAKPARIETAQQICKAQGPTCKVVVRPDAPRDLTGVGCECK*
Ga0137398_100233081	3300012683	Vadose Zone Soil	MKLLAGALLTVSIGWAVVLAAPKPARRPRLAKPARIETAEQICKAQGPTCKVLVRPDAPRDLTGVGCECK*
Ga0137397_100051195	3300012685	Vadose Zone Soil	MRLLLGALLTVAIGWGVVLAAPKPVRRPRAARTQQQARRDTAEQICKAQGANCKVAMRPDAPRDFAGAGCVCE*
Ga0137397_101892873	3300012685	Vadose Zone Soil	MKLLAGALLTVAIGWTVVLAAPKPARRPRLAKPARLETAERICKAQGPTCKVVVRPDAPRDFSGAGCVCD*
Ga0137397_106076382	3300012685	Vadose Zone Soil	MKLLAGALLTVAIGWAVVLAAPKPVRRPRLAKPARIETAEQICKAQGPTCKVVVRPDAPRDLTGVGCECK*
Ga0137396_110088802	3300012918	Vadose Zone Soil	MKLLAGALLTVSIGWAVVLAAPKPARRPRLAKPARIETAEQICKAQGPTCKVVVRPDAPRDLTGVGCECK*
Ga0137394_103337772	3300012922	Vadose Zone Soil	MKLLAGALLTVAIGWTVVLAAPKPARRPRLAKPARIETAERICKAQGPTCKVVVRPDAPRDFSGAGCVCD*
Ga0137394_107000711	3300012922	Vadose Zone Soil	MKLLAGALLTVAIGWAVVLAAPKPVRRTRLAKPARIETAEQICKAQGPTCKVVVRP
Ga0137394_111871362	3300012922	Vadose Zone Soil	MKLLAGALLTVSIGWAVVLAAPKPARRPRLAKPARIETAERICKAQGPTCKVVVRPDAPRDLTGVGCECK*
Ga0137404_103603482	3300012929	Vadose Zone Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRQWSKAAARRETAEQLCKAQGPKCRLVVLPDAPLDLTGAGCVCDAEPARD*
Ga0137404_121764731	3300012929	Vadose Zone Soil	MKLLAGALLTVSIGWAVVLAAPKPARRPRHAKPARIETAEQICKAQGPTCKVVVRPDAPRDLTGVGCECK*
Ga0137407_115360191	3300012930	Vadose Zone Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRHGSKAAARRETAEQLCKAQGPKCRLVVRPDAPLDLTGAGCVCDAEPARD*
Ga0137410_104630262	3300012944	Vadose Zone Soil	MKLLAGALLTVAIGWAVVLAAPKPARRPRLAKPARIETAEQICKAQGPTCKVVVRPGAPRDLTGVGCECK*
Ga0137410_120746552	3300012944	Vadose Zone Soil	LAGALLTVAIGWAVVLAAPKPVRRPRLAKPVQIETAEQICKAQGPTCKVVVRPDAPRDLTGVGCECK*
Ga0134077_103314722	3300012972	Grasslands Soil	MKLLLGELLTVAIGWGVVLAAPKPVRRHASKAAARRANAEQLCKAQGANCRLVVRPDAPQDLTGAGCVCEMEPTRD*
Ga0134087_102451873	3300012977	Grasslands Soil	LGALLTVAIGWGVVLAAPTPVRRHASKAAARRANAEQLCKAQGANCRLVVRPDAPQDLTGAGCVCEMEPTRD*
Ga0134081_101231671	3300014150	Grasslands Soil	MKLLLGALLTVAIGWGVVLAAPTPVRRHASKAAARRANAEQLCKAQGANCTLVLRPDAPQDLTGAGCVYEM
Ga0134078_100262493	3300014157	Grasslands Soil	MKLQLGALLTVAIGWGVVLAAPTPVRRHASKAAARRANAEQLCKAQGANCRLVVRPDAPQDLTGAGCVCEMEPTRD*
Ga0134079_104744432	3300014166	Grasslands Soil	MKLLLGALLTVAIGWGVVLAAPTPVRRHASKAAARRANAEQLCKAQGANCRLVVRPDAPQDLTGAGCVCEM
Ga0137409_100328185	3300015245	Vadose Zone Soil	MKLLAGALLTVSIGWAGVLAAPKPARRPRLAKPARIETAEQICKAQGPTCKVVVRPGAPRDLTGVGCECK*
Ga0187825_101997662	3300017930	Freshwater Sediment	MRLFLGALATLAIGWGVVLASPKPLPRKHTSKLAARKAAAEQLCKSQGPTCKLVVRPDAPRDFTGAACVCDQVASTATPQ
Ga0184605_101994373	3300018027	Groundwater Sediment	RQRMKLLLGALVTVAIGWGVVLAAPKPVRRHASKAAARRANAEQLCKAQGANCRLVVRPDAPQDLTGAGCVCETEPTQD
Ga0187788_103664242	3300018032	Tropical Peatland	MKLLLGALLTVAIGWAVVLAAPKPEPRKHVSKSAVARRATAEQLCKQQGTNCKLVVRPDAPRDLTGAGCVCE
Ga0184619_100212961	3300018061	Groundwater Sediment	MKLLLGALVTVAIGWGVVLAAPKPVRRHASKAAARRANAEQLCKAQGANCRLVVRPDAPQDLTGAGCVCETEPTQD
Ga0066655_100954773	3300018431	Grasslands Soil	MKLLLGALLTVAIGWGVVLAAPTPVRRHASKAAARRANAEQLCKAQGANCRLVVRPDAPQDLTGAGCVCEMEPTRD
Ga0066667_100411493	3300018433	Grasslands Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRHGSKAAARRETAEQLCKAQGPNCRLVVGAGAPRDLTGAGCVCEAEPARD
Ga0066667_100702882	3300018433	Grasslands Soil	MKLLLGALLTVAIGWGVVLAAPKPVRRHASKAAARRANAEQLCKAQGANCRLVVRPDAPQDLTGAGCVCEMEPTRD
Ga0066662_100697434	3300018468	Grasslands Soil	TRVDRTMRLFFAALATIAIGWGVVLAAPKPVPRRHGSKAAARRATAEELCKAQGPSCRLIVPPDAPRDLTGAGCVCDVEPARD
Ga0137408_12227075	3300019789	Vadose Zone Soil	MKLLAGALLTVAIGWAVVLAAPKPARRPRLAKPARIETAEQICKAQGPTCKVVVRPDAPRDLTGVGCECK
Ga0179592_105163022	3300020199	Vadose Zone Soil	MKLLAGALLTVAIGWAVVLAAPKPVRRPRLAKPVQIETAEQICKAQGPTCKVLVRPDAPRDLTGVGCECK
Ga0137417_10792752	3300024330	Vadose Zone Soil	MRLLLAAVATIAIGWGVVLAAPKPAHRHVSKAAARRANAEQLCKAQGPNCRLVVRPDAPQDLTGAGCVCDEARRD
Ga0207687_118407551	3300025927	Miscanthus Rhizosphere	MKLLMAALVTVAIGWAVVLAAPKPAQGRFASRAAARRAKAEQICKSQGDTCRLIVRPDAPKDLTGAACVCDETRD
Ga0207677_107976713	3300026023	Miscanthus Rhizosphere	LVTVAIGWAVVLAAPKPAQGRFASRAAARRAKAEQICKSQGESCRLIVRPDAPKDLTGAACVCDETRD
Ga0207648_103680723	3300026089	Miscanthus Rhizosphere	MKLLMAALVTVAIGWAVVLAAPKPAQGRFASRAAARRAKAEQICKSQGESCRLIVRPDAPKDLTGAACVCDETRD
Ga0209234_10971622	3300026295	Grasslands Soil	MRLLLAAVATIAIGWGVVLAAPKPAPRPHGSKAAARRATAEQLCKAQGPTCRLIVRPDAPRDPAGAGCVCDVEPARD
Ga0209235_100003626	3300026296	Grasslands Soil	MRLLLAAVATIAIGWGVVLAAPKPAHRHVSKAAARRANAEQLCKAQGPSCRLIVPPDAPRDLTGAGCVCDVEPARD
Ga0209027_10084491	3300026300	Grasslands Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRHGSKAAARRETAEQLCKAQGPNCRLVVGAGAPRDLTGAGCVCEAE
Ga0209238_11643032	3300026301	Grasslands Soil	MRLFFAALATIAIGWGVVLAAPKPVPRRHGSKAAARRATAEELCKAQGPSCRLIVPPDAPRDLTGAGCVCDVEPARD
Ga0209687_10127092	3300026322	Soil	MRLLLAAVATIAIGWGVVLAAPKPAPRPHGSKAAARRATAEQLCKAQGPTCRLIVRPDAPRDPAGAGCVCAVEPARD
Ga0209802_10766332	3300026328	Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRHGLRAAARRETAEQLCKAQGPNCRLVVPDAPRDLTGGISQLLCEF
Ga0209473_11087642	3300026330	Soil	MRLLLGALLTVAIGWGVVLAAPKPARRHGSKVAARREAAERLCKAQGPTCKLVVRPDAPQDLTGAGCVCETEPTRD
Ga0209267_11291372	3300026331	Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRHGWKAAARRETAEQLCKAQGPNCRLVVGAGAPRDLTGAGCVCEAEPARD
Ga0209803_12598632	3300026332	Soil	MRLLLAAVATIAIGWGVVLAAPKPAPRPHGSKAAARRATAEQLCKAQGPTCRLIVRPDAPRDLAGAGCVCDVEPARD
Ga0209804_11280811	3300026335	Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRHGSKAAARRETAEQLCKAQGPNCRLVVGAGAPCDLTGAGCVCEAEPARD
Ga0209808_10534911	3300026523	Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRHGSKAAARRETAEQLCKAQGPNCRLVVGAGAPRDL
Ga0209808_10575871	3300026523	Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRQWSKAAARRETAEQLCKAQGPKCRLVVRPDAPLDLTGAGCVCDAEPARD
Ga0209690_10190813	3300026524	Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRHGSKAAARRETAEQLCKAQGPNCRLVVPDAPRDLTGAGCVCDAEPARD
Ga0209059_12230122	3300026527	Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRQWSKAAARRETAEQLCKAQGPKCRLVVRPDAPLDLTGAGCVCGAEPARD
Ga0209161_100315134	3300026548	Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRHGSKAAARRETAEQLCKAQGPSCRLVVGAGAPRDPTGAGCICEAEPARD
Ga0179587_100341995	3300026557	Vadose Zone Soil	MKLLAGALLTVAIGWAVVLAAPKPVRRPRLAKPVQIETAEQICKAQGPTCKVLVRPD
Ga0179587_101738593	3300026557	Vadose Zone Soil	MRLLLGALLTVAIGWGVVLAAPKPVRRPRAARTQQQARRDTAEQICKAQGANCKVAMRPDAPRDFAGAGCVCE
Ga0209076_10089122	3300027643	Vadose Zone Soil	MKLLAGALLTVSIGWAVVLAAPKPARRPRLAKPARIETAERICKAQGPTCKVVVRPDAPRDLTGVGCECK
Ga0209388_11046932	3300027655	Vadose Zone Soil	MKLLAGALLTVAIGWAVVLAAPKPVRRTRLAKPARIETAEQICKAQGPTCKVVVRPDAPRDLTGVGCECK
Ga0209009_11795041	3300027667	Forest Soil	MRLLLGALATLAIGWGVVLASPKPVPRKHVSKLAARKATAEQLCKQQGPTCRLVVRPDAPRDLTGAGCICD
Ga0209588_10445363	3300027671	Vadose Zone Soil	MKLFAGALLTVAIGWAVVLAAPKPVRRPRLAKPARIETAEQICRAQGPTCKVVVRPDAPRDLTGVGCECK
Ga0209588_11325772	3300027671	Vadose Zone Soil	MKLFAGALLTVAIGWAVVLAAPKPVRRPRLAKPARIETAEQICKAQGPTCKVVVRPDAPRDLTGVGCECK
Ga0209011_10058332	3300027678	Forest Soil	MKLFAGALLTVAIGWAVVLAAPKPVRRPRLAKPARIDTAEQICKAQGPTCKVVVRPDAPRDLTGVGCECK
Ga0209328_100333573	3300027727	Forest Soil	MKLLAGALLTVAIGWAVVLAAPKPVRRPRLAKPARIETAEQICKAQGPTCRVVVRPDAPRDLTGVGCECK
Ga0209689_11121352	3300027748	Soil	MRLLFAALATIAIGWGVVLAAPKPAPRRHGSKAAVRRETADQLCKAQGPNCRLVVPDAPRDLTGAGCVCDAEPARD
Ga0209488_106147962	3300027903	Vadose Zone Soil	MRLLLGALLTVAIGWGVVLAAPKPVRRPRAARMQQQARRDTAEQICKAQGANCKVAVRPDAPRDFAGAGCVCE
Ga0307312_102057371	3300028828	Soil	MRLLVLALVTIAIGWGVVLAAPRPERRYAGKAAARRTAAEQICKAHGENCRLIVRPEAPRDL
Ga0307469_109063072	3300031720	Hardwood Forest Soil	MRLLLGALLTVAIGWGIVLAAPKPVRRPRAARQQQQQARRDTAEENCKAQGPTCKVAVRPDAPRDFSGAGCVCE
Ga0307473_100935401	3300031820	Hardwood Forest Soil	MRLVLGAVLTLAIGWGVVLAAPKPARRHASKAAARRANAEQLCKAQGANCRLVVRPDAPRDLTGAGCVCDAE
Ga0307471_1002156573	3300032180	Hardwood Forest Soil	MRLVLGAVLTLAIGWGVVLAAPKPARRHASKAAARRANAEQLCKAQGANCRLVVRPDAPRDLTGAGCVCDAEPARD
Ga0335085_100299322	3300032770	Soil	MKLLLGALLTVAIGWAVVLAAPKPEPRKHVSKSAVARRATAEQLCKQQGANCRLVERPDAPRDLTGAGCVCD
Ga0335082_101815113	3300032782	Soil	MKLLLGALLTVAIGWAVVLAAPKPEPRKHVSRSAVARRATAEQLCKQQGANCRLVERPDAPRDLTGAGCVCD
Ga0326726_102317253	3300033433	Peat Soil	MRLLLGALLTVAIGWGVVLAAPKPEPRKHASKAMARRATAEQICKQQGPNCRLVVRPDAPRDLTGAGCVCE
Ga0316628_1021654982	3300033513	Soil	VRPVVPGMRLLLGALVTVAIGWGVVLAAPKPVPRTHFSRLAARKANAERICKAQGPTCRLVARPDAPRDFSGAACVCEQDASHNPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055600

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences