Metagenome / Metatranscriptome Family F055698

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055698
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	62 residues
Representative Sequence	MRCQNSLDNNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL
Number of Associated Samples	91
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	35.77 %
% of genes near scaffold ends (potentially truncated)	22.46 %
% of genes from short scaffolds (< 2000 bps)	82.61 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.116 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.014 % of family members)
Environment Ontology (ENVO)	Unclassified (21.739 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.551 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.18% β-sheet: 22.73% Coil/Unstructured: 59.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00072	Response_reg	7.25
PF03992	ABM	2.17
PF01402	RHH_1	0.72
PF01037	AsnC_trans_reg	0.72
PF07452	CHRD	0.72
PF13561	adh_short_C2	0.72
PF01391	Collagen	0.72
PF13392	HNH_3	0.72
PF00775	Dioxygenase_C	0.72
PF00232	Glyco_hydro_1	0.72
PF01094	ANF_receptor	0.72
PF13576	Pentapeptide_3	0.72
PF04075	F420H2_quin_red	0.72
PF00127	Copper-bind	0.72
PF02239	Cytochrom_D1	0.72
PF13506	Glyco_transf_21	0.72
PF13964	Kelch_6	0.72
PF00290	Trp_syntA	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0159	Tryptophan synthase alpha chain	Amino acid transport and metabolism [E]	0.72
COG0683	ABC-type branched-chain amino acid transport system, periplasmic component	Amino acid transport and metabolism [E]	0.72
COG2723	Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase	Carbohydrate transport and metabolism [G]	0.72
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.12 %
All Organisms	root	All Organisms	31.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.12 %
cellular organisms	root	All Organisms → cellular organisms	28.26 %
Viruses	superkingdom	All Organisms → Viruses	3.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.12 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	27.54 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.62 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.12 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	18.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.62 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.12 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	18.12 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.62 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.12 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	16.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.62 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	1.45 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.12 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	16.67 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.62 %
unclassified Nitrosopumilales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales	0.72 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	0.72 %
Nitrosopumilaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.12 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	15.94 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.62 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.72 %
unclassified Nitrososphaerales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales	0.72 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.72 %
Nitrosopumilus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.12 %
unclassified Nitrososphaeraceae	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae	12.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.62 %
Candidatus Nitrosocosmicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	2.17 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1.45 %
Nitrosopumilus adriaticus	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus adriaticus	0.72 %
Nitrososphaerales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	0.72 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.72 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.12 %
Nitrososphaeraceae archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	12.32 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	3.62 %
Candidatus Nitrosocosmicus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	2.17 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1.45 %
Nitrosopumilus adriaticus	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus adriaticus	0.72 %
Nitrososphaerales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	0.72 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.72 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8774055	Not Available	1379	Open in IMG/M
2140918013\|NODE_556923_length_1524_cov_6.351050	Not Available	1556	Open in IMG/M
2228664021\|ICCgaii200_c0651236	Not Available	657	Open in IMG/M
2228664021\|ICCgaii200_c0652509	Not Available	534	Open in IMG/M
3300000890\|JGI11643J12802_10127441	Not Available	556	Open in IMG/M
3300003987\|Ga0055471_10014524	All Organisms → Viruses → Predicted Viral	1784	Open in IMG/M
3300003998\|Ga0055472_10070107	Not Available	928	Open in IMG/M
3300003998\|Ga0055472_10303820	Not Available	513	Open in IMG/M
3300003999\|Ga0055469_10195509	Not Available	630	Open in IMG/M
3300004157\|Ga0062590_101962792	Not Available	606	Open in IMG/M
3300004463\|Ga0063356_101050745	Not Available	1168	Open in IMG/M
3300004463\|Ga0063356_105111361	Not Available	564	Open in IMG/M
3300005093\|Ga0062594_102139765	Not Available	603	Open in IMG/M
3300005337\|Ga0070682_100409195	Not Available	1028	Open in IMG/M
3300005339\|Ga0070660_100661415	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	875	Open in IMG/M
3300005441\|Ga0070700_100768002	Not Available	773	Open in IMG/M
3300005578\|Ga0068854_101291565	Not Available	657	Open in IMG/M
3300006635\|Ga0075526_1017773	Not Available	512	Open in IMG/M
3300006792\|Ga0075530_1160471	Not Available	712	Open in IMG/M
3300006844\|Ga0075428_100724939	Not Available	1059	Open in IMG/M
3300006845\|Ga0075421_100925787	Not Available	993	Open in IMG/M
3300006845\|Ga0075421_101057383	Not Available	915	Open in IMG/M
3300006876\|Ga0079217_10070592	Not Available	1477	Open in IMG/M
3300006876\|Ga0079217_10162831	All Organisms → Viruses → Predicted Viral	1096	Open in IMG/M
3300006876\|Ga0079217_10345597	Not Available	849	Open in IMG/M
3300006876\|Ga0079217_10637942	Not Available	701	Open in IMG/M
3300006894\|Ga0079215_10304567	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	882	Open in IMG/M
3300006894\|Ga0079215_10377323	Not Available	825	Open in IMG/M
3300006894\|Ga0079215_10466609	Not Available	774	Open in IMG/M
3300006918\|Ga0079216_10041989	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1921	Open in IMG/M
3300006918\|Ga0079216_10513218	Not Available	796	Open in IMG/M
3300006918\|Ga0079216_10513792	Not Available	795	Open in IMG/M
3300006918\|Ga0079216_11459822	Not Available	570	Open in IMG/M
3300007004\|Ga0079218_10585793	Not Available	1014	Open in IMG/M
3300007004\|Ga0079218_12191498	All Organisms → cellular organisms → Archaea	641	Open in IMG/M
3300009094\|Ga0111539_10551783	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1342	Open in IMG/M
3300009100\|Ga0075418_12179325	All Organisms → cellular organisms → Archaea	604	Open in IMG/M
3300009146\|Ga0105091_10542954	All Organisms → cellular organisms → Archaea	594	Open in IMG/M
3300009147\|Ga0114129_10511304	Not Available	1567	Open in IMG/M
3300009156\|Ga0111538_11124101	Not Available	993	Open in IMG/M
3300009157\|Ga0105092_10298464	Not Available	909	Open in IMG/M
3300009162\|Ga0075423_11758359	Not Available	668	Open in IMG/M
3300009168\|Ga0105104_10008751	Not Available	6551	Open in IMG/M
3300009168\|Ga0105104_10047941	Not Available	2333	Open in IMG/M
3300009168\|Ga0105104_10052840	Not Available	2211	Open in IMG/M
3300009168\|Ga0105104_10300249	All Organisms → cellular organisms → Archaea	882	Open in IMG/M
3300009789\|Ga0126307_10039306	All Organisms → cellular organisms → Archaea	3668	Open in IMG/M
3300009789\|Ga0126307_10071775	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	2727	Open in IMG/M
3300009789\|Ga0126307_10243834	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1444	Open in IMG/M
3300009789\|Ga0126307_10355515	All Organisms → Viruses → Predicted Viral	1180	Open in IMG/M
3300009789\|Ga0126307_11245257	Not Available	602	Open in IMG/M
3300009840\|Ga0126313_10032931	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	3568	Open in IMG/M
3300010036\|Ga0126305_11143926	Not Available	537	Open in IMG/M
3300010037\|Ga0126304_10009291	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	5292	Open in IMG/M
3300010037\|Ga0126304_10016600	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	4127	Open in IMG/M
3300010037\|Ga0126304_10042033	Not Available	2745	Open in IMG/M
3300010038\|Ga0126315_10033655	Not Available	2685	Open in IMG/M
3300010040\|Ga0126308_10017536	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → Nitrosopumilus adriaticus	3793	Open in IMG/M
3300010040\|Ga0126308_10045428	Not Available	2528	Open in IMG/M
3300010040\|Ga0126308_10366947	Not Available	956	Open in IMG/M
3300010044\|Ga0126310_10005608	All Organisms → cellular organisms → Archaea	5475	Open in IMG/M
3300010045\|Ga0126311_10043830	Not Available	2836	Open in IMG/M
3300010045\|Ga0126311_10098986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1997	Open in IMG/M
3300010166\|Ga0126306_10007393	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	6765	Open in IMG/M
3300010166\|Ga0126306_11760116	Not Available	518	Open in IMG/M
3300010399\|Ga0134127_10918354	Not Available	932	Open in IMG/M
3300011332\|Ga0126317_10687494	Not Available	877	Open in IMG/M
3300011333\|Ga0127502_10212147	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1088	Open in IMG/M
3300011333\|Ga0127502_11230371	Not Available	1038	Open in IMG/M
3300012884\|Ga0157300_1122027	Not Available	504	Open in IMG/M
3300012897\|Ga0157285_10024763	All Organisms → Viruses → Predicted Viral	1307	Open in IMG/M
3300012911\|Ga0157301_10162917	Not Available	720	Open in IMG/M
3300012914\|Ga0157297_10144396	Not Available	769	Open in IMG/M
3300012943\|Ga0164241_10931582	Not Available	636	Open in IMG/M
3300013096\|Ga0157307_1009747	All Organisms → cellular organisms → Archaea	1470	Open in IMG/M
3300013096\|Ga0157307_1011538	Not Available	1371	Open in IMG/M
3300014265\|Ga0075314_1151394	Not Available	538	Open in IMG/M
3300014265\|Ga0075314_1170801	Not Available	516	Open in IMG/M
3300014270\|Ga0075325_1165301	Not Available	570	Open in IMG/M
3300015201\|Ga0173478_10349363	Not Available	689	Open in IMG/M
3300015372\|Ga0132256_101199359	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	873	Open in IMG/M
3300015373\|Ga0132257_100126834	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	2970	Open in IMG/M
3300018067\|Ga0184611_1022945	Not Available	1939	Open in IMG/M
3300018073\|Ga0184624_10162318	Not Available	987	Open in IMG/M
3300018074\|Ga0184640_10302411	Not Available	726	Open in IMG/M
3300018432\|Ga0190275_10248079	Not Available	1716	Open in IMG/M
3300018432\|Ga0190275_12459230	Not Available	598	Open in IMG/M
3300018465\|Ga0190269_10849432	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	665	Open in IMG/M
3300018466\|Ga0190268_10003801	Not Available	3396	Open in IMG/M
3300018466\|Ga0190268_10050042	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	1650	Open in IMG/M
3300018466\|Ga0190268_10218855	Not Available	1060	Open in IMG/M
3300018469\|Ga0190270_10143359	All Organisms → cellular organisms → Archaea	1926	Open in IMG/M
3300018469\|Ga0190270_10216123	Not Available	1636	Open in IMG/M
3300018476\|Ga0190274_10016366	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Candidatus Nitrosocosmicus	4752	Open in IMG/M
3300018476\|Ga0190274_11902235	Not Available	690	Open in IMG/M
3300018481\|Ga0190271_12109555	Not Available	671	Open in IMG/M
3300018481\|Ga0190271_12653797	Not Available	601	Open in IMG/M
3300019767\|Ga0190267_10047711	All Organisms → cellular organisms → Archaea	1451	Open in IMG/M
3300019884\|Ga0193741_1004364	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	3857	Open in IMG/M
3300019884\|Ga0193741_1012403	Not Available	2214	Open in IMG/M
3300019884\|Ga0193741_1041296	Not Available	1190	Open in IMG/M
3300019884\|Ga0193741_1054942	All Organisms → Viruses → Predicted Viral	1027	Open in IMG/M
3300023261\|Ga0247796_1120650	All Organisms → cellular organisms → Archaea	517	Open in IMG/M
3300024430\|Ga0196962_10018935	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	2056	Open in IMG/M
3300025567\|Ga0210076_1141851	Not Available	521	Open in IMG/M
3300025919\|Ga0207657_10379600	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1113	Open in IMG/M
3300025932\|Ga0207690_10532302	Not Available	953	Open in IMG/M
3300025932\|Ga0207690_11694748	Not Available	528	Open in IMG/M
3300025937\|Ga0207669_11500916	Not Available	575	Open in IMG/M
3300025961\|Ga0207712_10145948	All Organisms → cellular organisms → Archaea	1821	Open in IMG/M
3300026040\|Ga0208144_1027088	Not Available	625	Open in IMG/M
3300026118\|Ga0207675_100433831	Not Available	1300	Open in IMG/M
3300026142\|Ga0207698_11775709	Not Available	632	Open in IMG/M
3300026535\|Ga0256867_10048877	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	1715	Open in IMG/M
3300027637\|Ga0209818_1121604	Not Available	710	Open in IMG/M
3300027637\|Ga0209818_1260693	Not Available	526	Open in IMG/M
3300027639\|Ga0209387_1027041	Not Available	1149	Open in IMG/M
3300027647\|Ga0214468_1091701	Not Available	772	Open in IMG/M
3300027650\|Ga0256866_1081538	Not Available	868	Open in IMG/M
3300027743\|Ga0209593_10081550	Not Available	1206	Open in IMG/M
3300027743\|Ga0209593_10187610	All Organisms → cellular organisms → Archaea	732	Open in IMG/M
3300027876\|Ga0209974_10376489	All Organisms → cellular organisms → Archaea	554	Open in IMG/M
3300027886\|Ga0209486_10211609	Not Available	1102	Open in IMG/M
3300027907\|Ga0207428_10369088	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	1054	Open in IMG/M
3300027909\|Ga0209382_10658696	Not Available	1132	Open in IMG/M
3300027909\|Ga0209382_10680653	Not Available	1109	Open in IMG/M
3300030006\|Ga0299907_10020156	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	4999	Open in IMG/M
3300030006\|Ga0299907_10614281	Not Available	844	Open in IMG/M
3300030546\|Ga0247646_1148621	Not Available	632	Open in IMG/M
3300030579\|Ga0247633_10246924	Not Available	557	Open in IMG/M
3300031229\|Ga0299913_10101754	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	2806	Open in IMG/M
3300031229\|Ga0299913_10458839	Not Available	1261	Open in IMG/M
3300031847\|Ga0310907_10330505	Not Available	776	Open in IMG/M
3300031847\|Ga0310907_10350200	Not Available	757	Open in IMG/M
3300031903\|Ga0307407_10784571	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → unclassified Nitrososphaeraceae → Nitrososphaeraceae archaeon	724	Open in IMG/M
3300031903\|Ga0307407_10992106	Not Available	649	Open in IMG/M
3300032075\|Ga0310890_10500650	Not Available	923	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.43%
Host-Associated	Host-Associated	19.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Plants	Host-Associated → Plants	19.57%
Aquatic	Environmental → Aquatic	13.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.67%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.49%
Freshwater	Environmental → Aquatic → Freshwater	7.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.07%
Marine	Environmental → Aquatic → Marine	3.62%
Sediment	Environmental → Aquatic → Sediment	2.17%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.14%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.35%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.35%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.90%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.17%
Loam	Environmental → Terrestrial → Soil → Loam	1.45%
Sand	Environmental → Terrestrial → Soil → Sand	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.23%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	14.49%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.14%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.35%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.90%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.17%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.17%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.17%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.45%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.01%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	14.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	12.32%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.97%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	5.80%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.62%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.90%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.17%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.17%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.45%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.45%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.72%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300006635	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-three	Environmental	Open in IMG/M
3300006792	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL1-D	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012884	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300013096	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2	Environmental	Open in IMG/M
3300014265	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D2	Environmental	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026040	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027647	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 HiSeq	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030546	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb11 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030579	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Bnb10 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_03524610	2088090015	Soil	MRCQNSPDNNIRCKRTASKIAIVKDVIDKQSKFWICDDCFNEKMYNNKLCKDHLIQIMELRINKK
Iowa-Corn-GraphCirc_02247530	2140918013	Soil	MRCQNSTDANRRCDRTASKIAIVKDVIEKQSKIWICNDCFDEKLYNNKSFKDHLIRVGELNTKK
ICCgaii200_06512363	2228664021	Soil	VRCQNSTDANRRCDRTASKIAKDDIEKQSKFWICDDCFDEKLYNNKFFKDHLIKVVELNSKE
ICCgaii200_06525092	2228664021	Soil	VRCQNSTDANRRCDRTASKIAKDDIEKQSKFWICDDCFDEKLYXNKXFKDHLIKVVELNSKE
JGI11643J12802_101274413	3300000890	Soil	VRCQNSTDANRRCDRTASKIAKDDIEKQSKFWICDDCFDEKLYNNKFFKDHLIKVVELNSKE*
Ga0055471_100145244	3300003987	Natural And Restored Wetlands	MRCQNSTDTNRRCERTASKIAIVKDVIEKQSKFWICDDCFNEKLYNNKSFKDNLIKVVEVNSKK*
Ga0055472_100701071	3300003998	Natural And Restored Wetlands	MRCQDYTDDYNARRCKRTASKIAIVKQTINEKQSKLWICDDCFNEKMYSNQVFKKDLIQVTELNKNRNEFFFQS*
Ga0055472_103038202	3300003998	Natural And Restored Wetlands	MRCQNSLDNNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL
Ga0055469_101955091	3300003999	Natural And Restored Wetlands	MRCQNSTDANRRCDRTASKIAKDDIEKQSKFWICDDCFDEKLYNNKFFKYHLIKVVELNSKE*
Ga0062590_1019627921	3300004157	Soil	MSKFNSLDNNRRCKRTASKLVIVKDGIEKQSKFWICNDCFNEKMYNNKLFKDDLIQVVEL
Ga0063356_1010507452	3300004463	Arabidopsis Thaliana Rhizosphere	MRCQNSTDANRRCNRTASKIAIVKDVIEKQSKFWICNDCFDEKLYNNKFFKDHLIKLVELNSKK*
Ga0063356_1051113612	3300004463	Arabidopsis Thaliana Rhizosphere	VRCQNSTDANRRCDRTASKIAKDDIEKQSKFWICDDCFDEKLYNNKFFKYHLIKVVELNSKE*
Ga0062594_1021397652	3300005093	Soil	MRCQNSLDGNRRCKRTASKIAIVKDGIEKQLKFWICDDCFNEKMYNNKLFKEDLIQVVEL
Ga0070682_1004091951	3300005337	Corn Rhizosphere	MRCQNSLDNNRRCKRTASKIVIVKDGIEKQSKFWICNDCFNEKMYNNKLFKDDLIQVVEL
Ga0070660_1006614152	3300005339	Corn Rhizosphere	MMTLTRNEMSKFNSLDNNRRCKRTASKLVIVKDGIEKQSKFWIFDDCFNEKMYNKLFKEDLIQVVEL*
Ga0070700_1007680022	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MMTLTRNEMSKFNSLDNNRRCKRTASKLVIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL*
Ga0068854_1012915652	3300005578	Corn Rhizosphere	MRCQNSLDNNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL*INKKMGSSNTKN
Ga0075526_10177731	3300006635	Arctic Peat Soil	MRCQNSTDNNIRCKRTASKIAIVKNITEKQSKFWICDDCFNEKMYNNPLFKDHLIQVMEVTR*
Ga0075530_11604712	3300006792	Arctic Peat Soil	MRCQNSTDNNIRCKRTASKIAIVKNITEKQSKFWICDDCFNEKMYNNPLFKDHLIQVMKVTR*
Ga0075428_1007249391	3300006844	Populus Rhizosphere	MRCQNSTDANRRCDRTASKIAIVKDVIEKQSKIWICDDCFDEKLYNNKSFKDHLMRVVELNTKK*
Ga0075421_1009257873	3300006845	Populus Rhizosphere	MRCQNSLDDNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDDLIQVVDCE*
Ga0075421_1010573833	3300006845	Populus Rhizosphere	MRCQNSTDANRRCDRTASKIAIVKDVIEKQSKIWICDDCFDEKLYNNKSFKDHLIRVVELNTKK*
Ga0079217_100705923	3300006876	Agricultural Soil	MKCQNITDNNRRCKRTASKIVIVKRNIDEKQQSKLWICDECFNEKMYNDQLFKDHVIQVTELNKNRNELY*
Ga0079217_101628312	3300006876	Agricultural Soil	MRCQNSLDDNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL
Ga0079217_103455971	3300006876	Agricultural Soil	RCKRTASKIAIVKNVIDKQSKFWICDDCFNEKMYNNKLFKDHLIQVMELRINKK*
Ga0079217_106379422	3300006876	Agricultural Soil	MRCQNITDNNRRCKRTASKIAIVKHAIDEKQQSKLMICDECFNEKMYSDQLFKDKVIQVTELNKIEMGSILKRITR*
Ga0079215_103045671	3300006894	Agricultural Soil	MRCKNSLDDNRRCKRTASKIAIVKDGIDKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL
Ga0079215_103773231	3300006894	Agricultural Soil	MRCQNSPDDNRRCKRTASKIAIVKDGIGKQSKFWICDDCFNEKMYNNKLFKDDL
Ga0079215_104666092	3300006894	Agricultural Soil	MRCQNITDNNRRCKRTASKIAIVKHAIDEKQQSKLMICDECFNEKMYSDQLFKDKVIQVTELNKNRNGFYSKTNY*
Ga0079216_100419892	3300006918	Agricultural Soil	MKCQNITDNNRRCKRTASKIAIVKRIIDEKQQSKLWICDECFNEKMYNDQLFKDHIIQVTELNNKRSEF*
Ga0079216_105132183	3300006918	Agricultural Soil	MKCQNITDNNRRCKRTASKIAIVKLTLDEKQQSKLWICDECFNEKMYNDQLFKDHII
Ga0079216_105137921	3300006918	Agricultural Soil	MRCQNSPDDNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDHLIQVVELRLNKK*
Ga0079216_114598222	3300006918	Agricultural Soil	MRCQNSLDDNRRCKRTASKIAIVKDGIDKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL
Ga0079218_105857933	3300007004	Agricultural Soil	MKCQNITDNNRRCKRTASKIVIVKRNIDEKQQSKLWICDECFNEKMYNDQLFKDHIIQVTELNKKRNKF*
Ga0079218_121914982	3300007004	Agricultural Soil	MRCQNSPEDNRRCKRTASKIAIVKDGIENQSKFWICDDCFNEKMYNNKLFKDHLIQVVEL
Ga0111539_105517833	3300009094	Populus Rhizosphere	MKCQNITDNNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL
Ga0075418_121793252	3300009100	Populus Rhizosphere	QNSLDNNRRCKRTASKIAIVKDGIEKQSKFWIFDDCFNEKMYNKLFKEDLIQVVEL*
Ga0105091_105429542	3300009146	Freshwater Sediment	MRCQNSPDGNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL
Ga0114129_105113041	3300009147	Populus Rhizosphere	MRCQNSTDANRRCDRTASKIAIVKDVIEKQSKIWICDNCFDEKLYNNKSFKDHLIKVVELNAKK*
Ga0111538_111241012	3300009156	Populus Rhizosphere	MRCQNSLDNNKRCKRTASKIVIVKDGIEKQSKFWICNDCFNEKMYNNKLFKDDLIQVVEL
Ga0105092_102984643	3300009157	Freshwater Sediment	MRCQNSTDANRRCDRTASKIAIVKDVIEKQSKIWICDDCFDEKLYNNKSFKDHLIKVVELNSKK*
Ga0075423_117583592	3300009162	Populus Rhizosphere	MRCQNSLDNNKRCKRTASKIVIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL
Ga0105104_100087513	3300009168	Freshwater Sediment	MRCQNSTDANRRCDRTASKIVIVKDVSEKQSKIWICDDCFDEKLYNNKFFKDHLIKVVELNNKK*
Ga0105104_100479412	3300009168	Freshwater Sediment	MRCQNSPDIYRRCQRSATKIAILKDVFGEQSGFWICDECFNEKLFSDKLFKDHLIQVVELQIKK*
Ga0105104_100528403	3300009168	Freshwater Sediment	MRCQNSTDANRRCNRTASKIAIVKDVIEKQSKFWICDDCFDEKLYNNKFFKDHLIKLVELNSSKK*
Ga0105104_103002492	3300009168	Freshwater Sediment	MRCQNSLDGNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDHLIQVMELRINKK*
Ga0126307_100393062	3300009789	Serpentine Soil	MKCQNITDNNRRCKRTASKITIVKRTIDEKQQSKLWICDECFNEKMYNDQLFKDHILQVTELNKNRNELY*
Ga0126307_100717755	3300009789	Serpentine Soil	MTYDSSQNSLDNNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNK
Ga0126307_102438343	3300009789	Serpentine Soil	MRCQNSPDNNRRCKRTASKIIIIKDTNNVKQQSKWRICNDCFNEKMYGDQLFKDSLIQVTELNNKK*
Ga0126307_102583764	3300009789	Serpentine Soil	CKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKFFKEDLIQVVEL*
Ga0126307_103555151	3300009789	Serpentine Soil	MKCQNITDNNRRCKRTASKIAIVKRIIDEKQQSKFWICDECFHEKMYNDQYLKTI*
Ga0126307_112452572	3300009789	Serpentine Soil	MRCQNSPDDNRRCKRTASKIAIVKNGIEKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL
Ga0126313_100329315	3300009840	Serpentine Soil	MRCQNSPDDNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDNLIQVVEL
Ga0126305_111439261	3300010036	Serpentine Soil	MTYDSSQNSLDNNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL*
Ga0126304_100092917	3300010037	Serpentine Soil	MTYDSSQNSLDNNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKFFKEDLIQVVEL*
Ga0126304_100166005	3300010037	Serpentine Soil	MRCQNSLDNNRRCKRTASKIIIIKDTNNVKQQSKWRICNDCFNEKMYGDQLFKDSLIQVTELNNKK*
Ga0126304_100420335	3300010037	Serpentine Soil	MKCQNITDNNRCKRTASKIAIVKRIIDEKQQSKLWICDECFHEKMYNDQCLKTI*
Ga0126315_100336552	3300010038	Serpentine Soil	MKCQNITDNNRRCKRTASKIIIVKRTIDEKQQSKLWICDECFNEKMYNDQLFKDHILQVTELNKNRNELY*
Ga0126308_100175361	3300010040	Serpentine Soil	MRCQNSLDENRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDD
Ga0126308_100454288	3300010040	Serpentine Soil	MRCQNSPNDNRRCKRTASKIAIVKDGIEKQQSKFWICDDCFNEKMYNNKLFKDNLIQVVEL*
Ga0126308_103669471	3300010040	Serpentine Soil	LINSVGYLQEMRCQNSLDNNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKL
Ga0126310_100056083	3300010044	Serpentine Soil	MRCQNSLDENRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDDLIQVVDCE*
Ga0126311_100438301	3300010045	Serpentine Soil	MRCQNSPDDNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKD
Ga0126311_100989861	3300010045	Serpentine Soil	KCQNITDNNRRCKRTASKIAIVKRIIDEKQQSKFWICDECFHEKMYNDQYLKTI*
Ga0126306_1000739311	3300010166	Serpentine Soil	MKCQNITDNNRRCKRTASKIAIVKRIIDEKQQSKLWICDECFHEKMYNDQCLKTI*
Ga0126306_117601162	3300010166	Serpentine Soil	MRCQNSPDDNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDDL
Ga0134127_109183543	3300010399	Terrestrial Soil	MRCQNSTDANRRCDRTASKIVIVKDVIEKQSKIWICDDCFDEKLYNNKFFKDHLIKVVELNSKK*
Ga0126317_106874942	3300011332	Soil	MRCQNSLDNNRRCKRTATKIAIVKDGIEKQSKFWICNDCFNEKMYNNKLFKEDLIQVVEL
Ga0127502_102121473	3300011333	Soil	MKCQNITDNNIRCKRTASKIAIVKSTIDGKQQSKLWICDECFNEKMYNDQLFKDHIIQVTELNKNRNELY*
Ga0127502_112303713	3300011333	Soil	MRCQNSPEDNRRCKRTASKIAIVKDVIDKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL
Ga0157300_11220271	3300012884	Soil	MRCQNSPDDNRRCKRTASKIAIVKDGIEKQSKFWICNDCFNEKMYNNKLFKDDLI
Ga0157285_100247632	3300012897	Soil	MRCQNSLDDNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKEDLIQVVEL
Ga0157301_101629171	3300012911	Soil	MRCQNFLDDNRRCKRTASKIVIVKDGIEKQSKFWICNDCFNEKMYNNKLFKDDLIQV
Ga0157297_101443962	3300012914	Soil	MRCQNSPDDNRRCKRTASKIAIVKDGIEKQSKFWICNDCFNEKMYNNKLFKDDLIQVVEL
Ga0164241_109315821	3300012943	Soil	MRCQNSTDANRRCDRTASKIAIVKDVIEKQSKIWICDDCFDEKLYNNKSFKDHLIKVVELNGKK*
Ga0157307_10097472	3300013096	Soil	MRCQNSLDDNRRCKRTTSKIVIVKDGIEKQSKFWICNDCFNEKMYNNKLFKDDLIQVVEL
Ga0157307_10115384	3300013096	Soil	RCQNFLDDNRRCKRTTSKIVIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL*
Ga0075314_11513941	3300014265	Natural And Restored Wetlands	LINSVGYLQEMRCQNSLDNNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL*
Ga0075314_11708013	3300014265	Natural And Restored Wetlands	MRCQDFTDDYNARRCKRTASKIAIVKQTINEKQSKLWICDDCFNEKMYSNQVFKKDLIQVTELNKNINEFFFQS*
Ga0075325_11653011	3300014270	Natural And Restored Wetlands	MRCQNSTDTNRRCERTASKIAIVKDVIEKQSKFWICDDCFNEKLYNNKSFKDHLIRVGELNTKK*
Ga0173478_103493632	3300015201	Soil	MRCQNSLDDNRRCKRTTSKIVIVKDGIEKQSKFWICNDCFNEKMYNNKLFKDDLIQVGEL
Ga0132256_1011993592	3300015372	Arabidopsis Rhizosphere	MTLTRNEMSKFNSLDNNRRCKRTASKLVIVKDGIEKQSKFWIFDDCFNEKMYNKLFKEDLIQVVELCKNKK*
Ga0132257_1001268346	3300015373	Arabidopsis Rhizosphere	MTLTRNEMSKFNSLDNNRRCKRTASKLVIVKDGIEKQSKFWIFDDCFNEKMYNKLFKEDLIQVVEL*
Ga0184611_10229453	3300018067	Groundwater Sediment	MRCQNSTDTNRRCERTASKIAIVKDVIEKQSKFWICDDCFNEKQYNNKFFKDHLVKVVELNNNNK
Ga0184624_101623183	3300018073	Groundwater Sediment	MRCQNSTDANRRCDRTASKIAIVKDVIEKQSKIWICDDCFDEKLYNNKSFKDHLIKVVELNSKK
Ga0184640_103024112	3300018074	Groundwater Sediment	MRCQNSTDTNRRCERTASKIAIVKDVIEKQSKFWICDDCFNEKQYNNKFFKDHLVKVVELNSKK
Ga0190275_102480791	3300018432	Soil	MRCQNSTDANRRCDRTASKIAIVKDVIEKQSKIWICDGCFDEKLYNNKFFKDHLIKVVELNSKK
Ga0190275_124592301	3300018432	Soil	EMRCQNSTDNNIRCKRTASKIAIVKNITEKQSKFWICDDCFNEKMYSNPLFKDHLIQVMEVTR
Ga0190269_108494323	3300018465	Soil	DNNRRCKRTASKIAIVKDVIDKQSKFWICNDCFNEKMYNNKLFKDYLIQIMKLRINKK
Ga0190268_100038017	3300018466	Soil	MRCQNSLDNNRRCKRTASKIAIVKDGIEKQSKFWICNDCFNEKMYNNKLFKDHLIQVMELRINKK
Ga0190268_100500423	3300018466	Soil	MRCQNSPDDNRRCKRTASKIAIVKDGIEKQSKLWICDDCFNEKMYNNKLFKDHQFK
Ga0190268_102188551	3300018466	Soil	MRCKNSTDNNIRCKRTASKIAIVKDVIDKQSKFWIYDDCFNEKMYNNKLFKDHLIQ
Ga0190270_101433592	3300018469	Soil	MRCQNSPDDNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDHLIQVMELRINKK
Ga0190270_102161233	3300018469	Soil	MRCQNSTDTNRRCERTASKIAIVKDVIEKQSKFWICDDCFNEKLYNNKFFKDHLVKVVELNNNNK
Ga0190274_100163664	3300018476	Soil	MRCKNSPDNNIRCKITASKIAIVKDVIDKQSKFWICDDCFNEKIYNNKLCKDHLIQIMELRINKK
Ga0190274_119022352	3300018476	Soil	LINSVGYLQEMRCQNSLDNNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL
Ga0190271_121095552	3300018481	Soil	MRCQNSPDNNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL
Ga0190271_126537972	3300018481	Soil	MRCQHYTDDYNARRCKRTASKIAIVKQTINEKQSKLWICDDCFNEKMYSNQVFKKDLIQVTELNKNRNEFFFQS
Ga0190267_100477112	3300019767	Soil	MRCQNSLDDNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDHLIQVMELRINKK
Ga0193741_10043645	3300019884	Soil	MRCQNSPDNNRRCKRTASKIAIVKDVIDKQSKFWICDDCFNEKMYNNKLFKDHLIQVMELRINKK
Ga0193741_10124031	3300019884	Soil	MRCKNSTDNNIRCKRTASKIIAIVKDVIDKQSKLCIYDDCFNEKMYNNKLFKDDLIQVTELNK
Ga0193741_10412961	3300019884	Soil	MRCQNSTDNNIRCKRTASKIAIVKNIIEKQSKFWICDDCFNEKMYNNPLFKDHLIQVMEVTR
Ga0193741_10549421	3300019884	Soil	MRCQNSPEDNRRCKRTASKIAIVKDGIENQSKFWICDDCFNEKMYNNKLFKDDLIEVVEL
Ga0247796_11206501	3300023261	Soil	SIVSYIQEMRCQNFLDDNRRCKRTTSKIVIVKDGIEKQSKFWVFDDCFNEKMYIINCSKT
Ga0196962_100189353	3300024430	Soil	MKCQNITDNNRRXKRTASKIAIVKLTVHEKQQSKLWICDECYNEKMYSDQLFKDHIIQVTELNKNRNELY
Ga0210076_11418511	3300025567	Natural And Restored Wetlands	MRCENSPDNYRRCRRTASKIAIVKDVFKEKQSKFWICNECFNEKMFSDQIFKNNLIQLIELNK
Ga0207657_103796002	3300025919	Corn Rhizosphere	MMTLTRNEMSKFNSLDNNRRCKRTASKLVIVKDGIEKQSKFWIFDDCFNEKMYNKLFKEDLIQVVEL
Ga0207690_105323023	3300025932	Corn Rhizosphere	EMRCQNSPDDNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKEDLIQVVE
Ga0207690_116947481	3300025932	Corn Rhizosphere	MTLTRNEMSKFNSLDNNRRCKRTASKLVIVKDGIEKQSKFWIFDDCFNEKMYNKLFKEDLIQVVEL
Ga0207669_115009162	3300025937	Miscanthus Rhizosphere	MRCQNSPDDNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL
Ga0207712_101459482	3300025961	Switchgrass Rhizosphere	MRCQNSLDNNRRCKRTASKIVIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL
Ga0208144_10270882	3300026040	Natural And Restored Wetlands	MRCQNSTDTNRRCERTASKIAIVKDVIEKQSKFWICDDCFNEKLYNNKSFKDNLIKVVEVNSKKXVSLLLIAKYF
Ga0207675_1004338312	3300026118	Switchgrass Rhizosphere	MRCQNSLDNNRRCKRTASKIAIVKDGIEKQLKFWICDDCFNEKMYNNKLFKDDLIQVVEL
Ga0207698_117757092	3300026142	Corn Rhizosphere	MRCQNSLDNNRRCKRTASKIAIVKDGIEKQLKFWICDDCFNEKMYNNKLFKEDLIQVVEL
Ga0256867_100488771	3300026535	Soil	MRCQDYTDDYNARRCKRTASKIAIVKQTINEKQSKLWICDDCFNEKMYSNQVFKKDLIQVTELNKNINEFFFQS
Ga0209818_11216042	3300027637	Agricultural Soil	MRCQNITDNNRRCKRTASKIAIVKHAIDEKQQSKLMICDECFNEKMYSDQLFKDKVIQVTELNKIEMGSILKRITR
Ga0209818_12606931	3300027637	Agricultural Soil	MKCQNITDNNRRCKRTASKIVIVKRTIDEKQQSKLWICDECFNEKMYNDHLFKDH
Ga0209387_10270412	3300027639	Agricultural Soil	MRCQNSPDDNRRCKRTASKIAIVKDGIGKQSKFWICDDCFNEKMYNDHLFKDHVIQVTELNNKRSEF
Ga0214468_10917011	3300027647	Soil	MRCQNSLDNNRRCKRTASKITIVKQTINEKQSKFWICDDCFNEKSFSDQLFKDDLIQVVELN
Ga0256866_10815381	3300027650	Soil	MRCQDYTDDYNARRCKRTASKIAIVKQTINEKQSKLWICDDCFNEKMYSNQVFKKDLIQVTELNKNRNEFFFQS
Ga0209593_100815502	3300027743	Freshwater Sediment	MRCQNSTDANRRCDRTASKIVIVKDVSEKQSKIWICDDCFDEKLYNNKFFKDHLIKVVELNNKK
Ga0209593_101876102	3300027743	Freshwater Sediment	RRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDHLIQVMELRINKK
Ga0209974_103764892	3300027876	Arabidopsis Thaliana Rhizosphere	LINSVGYLQEMRCQNSLDNNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDHLIQVMELRINKK
Ga0209486_102116093	3300027886	Agricultural Soil	MRCQNITDNNRRCKRTASKIAIVKHAIDEKQQSKLMICDECFNEKCIVIYCLKTK
Ga0207428_103690881	3300027907	Populus Rhizosphere	CQNSLDNNRRCKRTASKIVIVKDGIEKQSKFWICNDCFNEKMYNNKLFKDDLIQVVEL
Ga0209382_106586962	3300027909	Populus Rhizosphere	NSLDDNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDDLIQVVDCE
Ga0209382_106806532	3300027909	Populus Rhizosphere	MRCQNSTDANRRCDRTASKIAIVKDVIEKQSKIWICDDCFDEKLYNNKSFKDHLMRVVELNTKK
Ga0299907_100201565	3300030006	Soil	MRCQDYTDDYNARRCKRTASKIAIVKQTINEKQSKLWICDDCFNEKMYSNQVFKKDLIQVTELNKNINEFFFQY
Ga0299907_106142813	3300030006	Soil	PDNDRRCGRSASKIIIIKDTNDVKQQSKLWICNECFNEKLFNDRLFKDDPIQVLELNN
Ga0247646_11486211	3300030546	Soil	MRCQNSLNDNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL
Ga0247633_102469241	3300030579	Soil	MRCQNSLDDNRRCKRTASKIAIVKDGIEKQSKFWICDDCFNEKIYNNKLFKDDLTQVVEL
Ga0299913_101017546	3300031229	Soil	MRCQNFLDNNRRCKRTASKITIVKQTINEKQSKFWICDDCFNEKSFSDQLFKDDLIQVVELN
Ga0299913_104588393	3300031229	Soil	MRCQNSTDNNIRCKRTASKIAIVKNTTEKQSKFWICDDCFNEKMYNNPLFKDHLIQVMEV
Ga0310907_103305051	3300031847	Soil	MRCQNSTDANRRCDRTASKIAIVKDVIEKQSKIWICDDCFDEKLYNNKSFKDHLIRVVELNTKK
Ga0310907_103502001	3300031847	Soil	STDANRRCDRTASKIVIVKDVIEKQSKIWICDDCFDEKLYNNKFFKDHLIKVVELNSKK
Ga0307407_107845712	3300031903	Rhizosphere	DDNRRCKRTASKIAIVKDGVEKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL
Ga0307407_109921063	3300031903	Rhizosphere	DNRRCKRTASKIAIVKDVIDKQSKFWICDDCFNEKMYNNKLFKDDLIQVVEL
Ga0310890_105006501	3300032075	Soil	MRCQNSTDANRRCDRTASKIVIVKDVIEKQSKIWICDDCFDEKLYNNKFFKDHLIKVVELNSKKXISLLLLITKY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055698

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences