Metagenome / Metatranscriptome Family F055803

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055803
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	83 residues
Representative Sequence	HGDVMHGKEKFELWKQYFRDLLDETGQAYARGANLDDAQKQVAKALIPKYADKFDPGFPKSVIGNIAKAYQVIAFMN
Number of Associated Samples	112
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.17 %
% of genes near scaffold ends (potentially truncated)	97.10 %
% of genes from short scaffolds (< 2000 bps)	90.58 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.377 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (10.870 % of family members)
Environment Ontology (ENVO)	Unclassified (25.362 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.101 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.19% β-sheet: 0.00% Coil/Unstructured: 43.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.80
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.80
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.159.1.0: automated matches	d3fxka2	3fxk	0.69619
d.157.1.13: Alkylsulfatase-like	d2cfua2	2cfu	0.69615
c.37.1.9: Motor proteins	d1w7ja2	1w7j	0.65209
a.104.1.0: automated matches	d6xala_	6xal	0.64911
a.103.1.0: automated matches	d3msua1	3msu	0.64356

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF06463	Mob_synth_C	6.52
PF00072	Response_reg	5.80
PF13840	ACT_7	5.07
PF12840	HTH_20	4.35
PF00067	p450	1.45
PF00753	Lactamase_B	1.45
PF00069	Pkinase	1.45
PF02687	FtsX	1.45
PF00294	PfkB	0.72
PF17164	DUF5122	0.72
PF00795	CN_hydrolase	0.72
PF13432	TPR_16	0.72
PF03551	PadR	0.72
PF05977	MFS_3	0.72
PF00383	dCMP_cyt_deam_1	0.72
PF07681	DoxX	0.72
PF13226	DUF4034	0.72
PF13620	CarboxypepD_reg	0.72
PF00011	HSP20	0.72
PF02566	OsmC	0.72
PF13594	Obsolete Pfam Family	0.72
PF02371	Transposase_20	0.72
PF00111	Fer2	0.72
PF08327	AHSA1	0.72
PF01566	Nramp	0.72
PF12146	Hydrolase_4	0.72
PF01850	PIN	0.72
PF13384	HTH_23	0.72
PF14238	DUF4340	0.72
PF13424	TPR_12	0.72
PF02518	HATPase_c	0.72
PF12704	MacB_PCD	0.72
PF12697	Abhydrolase_6	0.72
PF08244	Glyco_hydro_32C	0.72
PF16694	Cytochrome_P460	0.72
PF00171	Aldedh	0.72
PF10518	TAT_signal	0.72
PF08808	RES	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG2896	GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA)	Coenzyme transport and metabolism [H]	6.52
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	5.80
COG2124	Cytochrome P450	Defense mechanisms [V]	1.45
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.72
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.72
COG1621	Sucrose-6-phosphate hydrolase SacC, GH32 family	Carbohydrate transport and metabolism [G]	0.72
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.72
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.72
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.72
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.72
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.72
COG1914	Mn2+ or Fe2+ transporter, NRAMP family	Inorganic ion transport and metabolism [P]	0.72
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.72
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.72
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.72
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.72
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.72
COG5654	Predicted toxin component of a toxin-antitoxin system, contains RES domain	Defense mechanisms [V]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.38 %
Unclassified	root	N/A	3.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.38 %
Unclassified	root	N/A	3.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.38 %
Unclassified	root	N/A	3.62 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	81.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.62 %
Unclassified	root	N/A	3.62 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	13.04 %
Unclassified	root	N/A	3.62 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.45 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.45 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.04 %
Unclassified	root	N/A	3.62 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.90 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.45 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.45 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.04 %
Unclassified	root	N/A	3.62 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.90 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	1.45 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.45 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.04 %
Unclassified	root	N/A	3.62 %
Hydrocarboniphaga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga	1.45 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.45 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.72 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.72 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13.04 %
Unclassified	root	N/A	3.62 %
Hydrocarboniphaga effusa	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa	1.45 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.45 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.72 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.72 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000789\|JGI1027J11758_12733033	All Organisms → cellular organisms → Bacteria → Acidobacteria	881	Open in IMG/M
3300001990\|JGI24737J22298_10108554	All Organisms → cellular organisms → Bacteria → Acidobacteria	822	Open in IMG/M
3300002245\|JGIcombinedJ26739_101434114	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300004114\|Ga0062593_101907882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300004152\|Ga0062386_100183998	All Organisms → cellular organisms → Bacteria → Acidobacteria	1640	Open in IMG/M
3300004635\|Ga0062388_102649165	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300005175\|Ga0066673_10349323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300005180\|Ga0066685_10071580	All Organisms → cellular organisms → Bacteria → Acidobacteria	2272	Open in IMG/M
3300005186\|Ga0066676_10748423	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300005328\|Ga0070676_11480850	All Organisms → cellular organisms → Bacteria → Acidobacteria	522	Open in IMG/M
3300005330\|Ga0070690_100379214	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300005330\|Ga0070690_100807847	All Organisms → cellular organisms → Bacteria → Acidobacteria	728	Open in IMG/M
3300005332\|Ga0066388_100357704	All Organisms → cellular organisms → Bacteria	2106	Open in IMG/M
3300005332\|Ga0066388_101796754	Not Available	1090	Open in IMG/M
3300005332\|Ga0066388_104201408	Not Available	734	Open in IMG/M
3300005332\|Ga0066388_107107784	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300005354\|Ga0070675_100334459	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300005434\|Ga0070709_10510658	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	914	Open in IMG/M
3300005438\|Ga0070701_10722946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300005440\|Ga0070705_101142273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300005445\|Ga0070708_101101792	All Organisms → cellular organisms → Bacteria → Acidobacteria	744	Open in IMG/M
3300005458\|Ga0070681_10288559	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300005467\|Ga0070706_100375385	All Organisms → cellular organisms → Bacteria → Acidobacteria	1325	Open in IMG/M
3300005467\|Ga0070706_101943303	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300005468\|Ga0070707_100319315	All Organisms → cellular organisms → Bacteria → Acidobacteria	1509	Open in IMG/M
3300005468\|Ga0070707_101390041	All Organisms → cellular organisms → Bacteria → Acidobacteria	668	Open in IMG/M
3300005471\|Ga0070698_100782943	All Organisms → cellular organisms → Bacteria → Acidobacteria	897	Open in IMG/M
3300005526\|Ga0073909_10595736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300005530\|Ga0070679_100164131	All Organisms → cellular organisms → Bacteria	2195	Open in IMG/M
3300005536\|Ga0070697_100797635	All Organisms → cellular organisms → Bacteria → Acidobacteria	835	Open in IMG/M
3300005536\|Ga0070697_101768158	Not Available	553	Open in IMG/M
3300005536\|Ga0070697_101790173	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300005539\|Ga0068853_102250951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa	528	Open in IMG/M
3300005539\|Ga0068853_102454686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Hydrocarboniphaga → Hydrocarboniphaga effusa	505	Open in IMG/M
3300005544\|Ga0070686_101036989	All Organisms → cellular organisms → Bacteria → Acidobacteria	674	Open in IMG/M
3300005547\|Ga0070693_100786133	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300005555\|Ga0066692_10178485	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1319	Open in IMG/M
3300005557\|Ga0066704_10904746	All Organisms → cellular organisms → Bacteria → Acidobacteria	546	Open in IMG/M
3300005574\|Ga0066694_10054685	All Organisms → cellular organisms → Bacteria	1821	Open in IMG/M
3300005591\|Ga0070761_10779860	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300006237\|Ga0097621_101060706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300006237\|Ga0097621_101346605	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300006354\|Ga0075021_10059338	All Organisms → cellular organisms → Bacteria → Acidobacteria	2224	Open in IMG/M
3300006358\|Ga0068871_100318789	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300006800\|Ga0066660_10295647	All Organisms → cellular organisms → Bacteria → Acidobacteria	1290	Open in IMG/M
3300006904\|Ga0075424_101466606	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300006954\|Ga0079219_12409566	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300009012\|Ga0066710_100360607	All Organisms → cellular organisms → Bacteria → Acidobacteria	2153	Open in IMG/M
3300009012\|Ga0066710_101068734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1247	Open in IMG/M
3300009098\|Ga0105245_10881775	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	936	Open in IMG/M
3300009137\|Ga0066709_101248441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1092	Open in IMG/M
3300009137\|Ga0066709_102970424	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300009176\|Ga0105242_10230134	Not Available	1661	Open in IMG/M
3300009545\|Ga0105237_12041364	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300009547\|Ga0116136_1001799	All Organisms → cellular organisms → Bacteria → Acidobacteria	10236	Open in IMG/M
3300010043\|Ga0126380_11793236	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300010326\|Ga0134065_10025374	All Organisms → cellular organisms → Bacteria → Acidobacteria	1702	Open in IMG/M
3300010337\|Ga0134062_10069823	All Organisms → cellular organisms → Bacteria → Acidobacteria	1465	Open in IMG/M
3300010358\|Ga0126370_10230418	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300010358\|Ga0126370_10866014	All Organisms → cellular organisms → Bacteria → Acidobacteria	812	Open in IMG/M
3300010358\|Ga0126370_11617041	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300010358\|Ga0126370_12021295	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300010359\|Ga0126376_13174903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300010361\|Ga0126378_11352798	All Organisms → cellular organisms → Bacteria → Acidobacteria	806	Open in IMG/M
3300010366\|Ga0126379_12552708	All Organisms → cellular organisms → Bacteria → Acidobacteria	609	Open in IMG/M
3300010376\|Ga0126381_101383998	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300010376\|Ga0126381_103977225	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300010398\|Ga0126383_13339071	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300011119\|Ga0105246_12244216	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300012189\|Ga0137388_12026450	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300012200\|Ga0137382_11302312	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300012205\|Ga0137362_10013404	All Organisms → cellular organisms → Bacteria → Acidobacteria	6097	Open in IMG/M
3300012207\|Ga0137381_10207106	All Organisms → cellular organisms → Bacteria → Acidobacteria	1701	Open in IMG/M
3300012361\|Ga0137360_11191733	All Organisms → cellular organisms → Bacteria → Acidobacteria	659	Open in IMG/M
3300012469\|Ga0150984_118251823	All Organisms → cellular organisms → Bacteria → Acidobacteria	538	Open in IMG/M
3300012582\|Ga0137358_10262918	All Organisms → cellular organisms → Bacteria → Acidobacteria	1173	Open in IMG/M
3300012582\|Ga0137358_10869346	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300012923\|Ga0137359_10867890	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M
3300012925\|Ga0137419_10065805	All Organisms → cellular organisms → Bacteria → Acidobacteria	2396	Open in IMG/M
3300012929\|Ga0137404_11085069	All Organisms → cellular organisms → Bacteria → Acidobacteria	734	Open in IMG/M
3300012929\|Ga0137404_12160973	All Organisms → cellular organisms → Bacteria → Acidobacteria	520	Open in IMG/M
3300012930\|Ga0137407_10508694	All Organisms → cellular organisms → Bacteria → Acidobacteria	1125	Open in IMG/M
3300012930\|Ga0137407_12121423	All Organisms → cellular organisms → Bacteria → Acidobacteria	537	Open in IMG/M
3300014166\|Ga0134079_10646111	All Organisms → cellular organisms → Bacteria → Acidobacteria	532	Open in IMG/M
3300015245\|Ga0137409_11557565	All Organisms → cellular organisms → Bacteria → Acidobacteria	511	Open in IMG/M
3300015264\|Ga0137403_10907004	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300015373\|Ga0132257_100167712	All Organisms → cellular organisms → Bacteria → Acidobacteria	2583	Open in IMG/M
3300015373\|Ga0132257_101036060	All Organisms → cellular organisms → Bacteria → Acidobacteria	1034	Open in IMG/M
3300015374\|Ga0132255_100469755	All Organisms → cellular organisms → Bacteria → Acidobacteria	1844	Open in IMG/M
3300016341\|Ga0182035_10451475	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1090	Open in IMG/M
3300016341\|Ga0182035_11776795	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300016357\|Ga0182032_11027252	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300017925\|Ga0187856_1000844	All Organisms → cellular organisms → Bacteria	26040	Open in IMG/M
3300017966\|Ga0187776_10663872	All Organisms → cellular organisms → Bacteria	734	Open in IMG/M
3300018025\|Ga0187885_10224009	All Organisms → cellular organisms → Bacteria → Acidobacteria	865	Open in IMG/M
3300018058\|Ga0187766_10551648	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300018482\|Ga0066669_11724277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300019878\|Ga0193715_1117627	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300021180\|Ga0210396_10757418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300021181\|Ga0210388_11389400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300021181\|Ga0210388_11816766	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300021401\|Ga0210393_11206952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300021403\|Ga0210397_10799126	All Organisms → cellular organisms → Bacteria → Acidobacteria	728	Open in IMG/M
3300021403\|Ga0210397_10914149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300021406\|Ga0210386_10241860	All Organisms → cellular organisms → Bacteria → Acidobacteria	1538	Open in IMG/M
3300021406\|Ga0210386_10576095	All Organisms → cellular organisms → Bacteria → Acidobacteria	972	Open in IMG/M
3300021406\|Ga0210386_11051371	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300021420\|Ga0210394_10948903	All Organisms → cellular organisms → Bacteria → Acidobacteria	747	Open in IMG/M
3300022509\|Ga0242649_1074304	Not Available	515	Open in IMG/M
3300025912\|Ga0207707_10765110	All Organisms → cellular organisms → Bacteria → Acidobacteria	807	Open in IMG/M
3300025921\|Ga0207652_10145469	All Organisms → cellular organisms → Bacteria → Acidobacteria	2121	Open in IMG/M
3300025924\|Ga0207694_11185648	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300025925\|Ga0207650_10011775	All Organisms → cellular organisms → Bacteria	6032	Open in IMG/M
3300025930\|Ga0207701_10167378	All Organisms → cellular organisms → Bacteria	1944	Open in IMG/M
3300025934\|Ga0207686_10505100	All Organisms → cellular organisms → Bacteria → Acidobacteria	939	Open in IMG/M
3300025937\|Ga0207669_10710504	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300025960\|Ga0207651_10712107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	885	Open in IMG/M
3300026041\|Ga0207639_12226080	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300026314\|Ga0209268_1040025	All Organisms → cellular organisms → Bacteria → Acidobacteria	1546	Open in IMG/M
3300026328\|Ga0209802_1231411	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300026532\|Ga0209160_1036590	All Organisms → cellular organisms → Bacteria → Acidobacteria	3015	Open in IMG/M
3300027096\|Ga0208099_1025944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	833	Open in IMG/M
3300027504\|Ga0209114_1108313	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300027505\|Ga0209218_1098716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300027737\|Ga0209038_10143511	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300027812\|Ga0209656_10421866	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
3300027867\|Ga0209167_10663475	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300027894\|Ga0209068_10759893	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300027908\|Ga0209006_10542149	All Organisms → cellular organisms → Bacteria → Acidobacteria	966	Open in IMG/M
3300028906\|Ga0308309_10563642	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	987	Open in IMG/M
3300031231\|Ga0170824_105415323	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300031668\|Ga0318542_10392149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	716	Open in IMG/M
3300031715\|Ga0307476_10831575	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300031716\|Ga0310813_10236698	All Organisms → cellular organisms → Bacteria → Acidobacteria	1514	Open in IMG/M
3300031962\|Ga0307479_11219197	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300032091\|Ga0318577_10297134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	773	Open in IMG/M
3300032174\|Ga0307470_10538411	All Organisms → cellular organisms → Bacteria → Acidobacteria	860	Open in IMG/M
3300032174\|Ga0307470_10796857	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.33%
Host-Associated	Host-Associated	16.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.81%
Plants	Host-Associated → Plants	16.67%
Aquatic	Environmental → Aquatic	6.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.42%
Freshwater	Environmental → Aquatic → Freshwater	5.07%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.07%
Roots	Host-Associated → Plants → Roots	2.17%
Sediment	Environmental → Aquatic → Sediment	1.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.17%
Loam	Environmental → Terrestrial → Soil → Loam	23.19%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.07%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.17%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.91%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.07%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.35%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.17%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.45%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.62%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.90%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.17%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.17%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	2.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.17%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.45%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.45%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.45%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.45%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.45%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001990	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3	Host-Associated	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027504	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J11758_127330332	3300000789	Soil	GDVMHGKEKFELWKQYFRDLLDETGXAXARGANLDDAQKQXAKVLIPKYADKFDPGFPKSVIGNIAKAYQVIAFMN*
JGI24737J22298_101085542	3300001990	Corn Rhizosphere	LDTAEKLDFDQALGGHGDVLHGKEKFELWKAYFRDLLNETARIYGEGASLEEAQKQVSTILIARYASKFDPNFPRSVGANVSKAYQVISQAR*
JGIcombinedJ26739_1014341142	3300002245	Forest Soil	GKEKFELWKQYFRDLLAETGQAYASGASLQEAQKQVAKILVPRYAAKFDPAFPQSVTANITKAYQVIAFAN*
Ga0062593_1019078822	3300004114	Soil	VLGGHGDVMHGKQKFELWKEYFGDLMEQTAQAYAQGATLDDAQKKLSPWLVAKYADKFDPGFSHDVGGNIAKAYQVIAMH*
Ga0062386_1001839981	3300004152	Bog Forest Soil	EKLDFDQVLGGHGDVMRGKEKFELWKQYLRDLMDQTAQAYSSGANLEEAQKQVAKVLVPKYADKFDPNFPKSVTANITKAYQVIAFPN*
Ga0062388_1026491652	3300004635	Bog Forest Soil	ITTLDNAEKLDFDQVLGGHGDVMHGKEKFELWKQYLRDLLDETGQAYARGATLEEAQKQVAKVLVPKYAAKFDPAFPQSVTANITKAYQVIAFAN*
Ga0066673_103493232	3300005175	Soil	KLDFDQVIGGHGNVMRGKERFDLWKHYFRDLLHEAAQAYARGASLEDAEKGISKTLIAKYSDKFDPGFPKSVIGNIAKAYQVIAFMP*
Ga0066685_100715801	3300005180	Soil	KFELWKAYFRDLLDETARIYSEGATLEEAQKQVSTMLIARYASKFDPNFPRSVTANVTKAYQVISQAR*
Ga0066676_107484232	3300005186	Soil	FDQVIGGHGNVMRGKERFDLWKHYFRDLLDEAAQAYARGASLEDAEKGISKTLIAKYSDKFDPGFPKSVIGNIAKAYQVIAFMP*
Ga0070676_114808501	3300005328	Miscanthus Rhizosphere	IIICGDALHGWTPFMADSYPFDWIRTLDAVEKLDFEQALGGHGDVMRGKEKFEMWKSYFRDLLDETGEAYSNGASLEQAQSQVSKALIAKYAAKFDPNFPQSVNANIAKAYQVIAMAR*
Ga0070690_1003792142	3300005330	Switchgrass Rhizosphere	QTLDTAEKLDFDQALGGHGDVLHGKEKFELWKAYFRDLLNETARIYGEGASLEEAQKQVSTILIARYASKFDPNFPRSVGANVSKAYQVISQAR*
Ga0070690_1008078471	3300005330	Switchgrass Rhizosphere	DAAEKLDFDQALGGHGDVMRGKEKFELWKTYFRDLLEETGRIYGQGASLEEAQKQVSTILIAKYASKFDPNFPRSVTANVTKAYQVISLAR*
Ga0066388_1003577043	3300005332	Tropical Forest Soil	TLDAAEKLDFDNVIGGHGDVIRGKEKFELWKQYFRDLMDATAQAYARGASLEDAEKEVSRILTEKYADKFDPGFPQSVIGNAAKAYQVIAFMR*
Ga0066388_1017967543	3300005332	Tropical Forest Soil	EMWKAYFHDLLDQTGEAYSNGASLEQAQSQVSKALIAKYAAKFDPNFPQSVNANIAKAYQVIAMAR*
Ga0066388_1042014081	3300005332	Tropical Forest Soil	LWKAYFRDLLDDTGRVYGEGASLEEAQKQVSTLLIAKYASKFDSNFAHSVTPNVTKAYQVISQAH*
Ga0066388_1071077842	3300005332	Tropical Forest Soil	AAEKLDFTQALGGHGDVMHNKDKFEMWKQYFHDLMDETANAYGNGASLEDAQKQVSKTLIAKYASKFDPNFPQSVTANVTKAYQTVAQAH*
Ga0070675_1003344591	3300005354	Miscanthus Rhizosphere	SYPFDWIQTLDTAEKLDFDQALGGHGDVLHGKEKFELWKAYFRDLLNEMARIYGEGASLEEAQKQVSTILIARYASKFDPNFPRSVGANVSKAYQVISQAR*
Ga0070709_105106581	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	DSYPYDWITTLDKAEKLDFDQVLGGHGDIMHGKERFELWKQYFTDLMAETGKAYANGATLEQAQAQVSKILIAKYSSKFDSAFPHDMIPNVTKAYQVIAFPN*
Ga0070701_107229462	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	QALGGHGGIMKGKEKFELWKAYFGDLMEQTAQVYADGASSDEAQKKVSAWLVAKYGDKFDPAFPKSVGANVAKAYSVVAQR*
Ga0070705_1011422732	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	KTYFRDLLEETGRIYGQGASLEEAQKQVSTILIAKYASKFDPNFPRSVTANVTKAYQVISLAR*
Ga0070708_1011017922	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	YFRDLLDETGQAYARGANLADAQKQLAKVLIPKYADRFDPGFPKSVIGNIAKAYQVIAFMN*
Ga0070681_102885591	3300005458	Corn Rhizosphere	QTLDAAEKLDFDQALGGHGDVMRGKEKFELWKTYFRDLLEETGRIYGQGASLEEAQKQVSTILIAKYASKFDPNFPRSVTANVTKAYQVISLAR*
Ga0070706_1003753851	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VIGGHGDVMHGKEKFELWKQYFRDLLDETGQAYARGANLDDAQKQLAKVLITKYADKFDPGFPKSVIGNIAKAYQVIAFMN*
Ga0070706_1019433031	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	GDVMHGKEKFELWKAYFHDLLDETAHVYGNGASLEDAQKEVSKALIAKYAAKFDPNFPQSVIANISKAYQVIAQAR*
Ga0070707_1003193151	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VIGGHGDVMHGKEKFELWKQYFRDLLDETGQAYARGANLADAEKQLAKVLIPKYADKFDPGFPKSVIGNIAKAYQVIAFMN*
Ga0070707_1013900411	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VIGGHGDVMHGKEKFELWKQYFRDLLDETGQAYARGANLDDSQKQVAKALIPKYANKFDPGFPKSIIGNIAKAYQVIAFMN*
Ga0070698_1007829431	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	DNAEKLDFDQVIGGHGDVMHGKEKFELWKQYFRDLLDETGQAYARGANLDDAQKQVAKVLIPKYADKFDPGFPKSVIGNIAKAYQIIAFMN*
Ga0073909_105957362	3300005526	Surface Soil	GHGGIMKGKEKFELWKAYFGDLMEQTAQVYADGATADEAQKKVSAWLVAKYGDKFDPAFPQSVGANVAKAYSVVAQR*
Ga0070679_1001641311	3300005530	Corn Rhizosphere	TLDTAEKLDFDQALGGHGDVLHGKEKFELWKAYFRDLLNETARIYGEGASLEEAQKQVSTILIARYASKFDPNFPRSVGANVSKAYQVISQAR*
Ga0070697_1007976351	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MHGKEKFELWKQYFRDLLDETGQAYARGANLADAEKQLAKVLIPKYADKFDPGFPKSVIGNIAKAYQVIAFMN*
Ga0070697_1017681581	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	EMWKAYFRDLLDQTGLAYSNGASLEQAQSQVSKTLIAKYAAKFDPNFPQSVGANIAKAYQVIAMPR*
Ga0070697_1017901731	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	KLDFDQVIGGHGDVMHGKEKFELWKQYFRDLLDETGQAYARGANLDDSQKQVAKALIPKYADKFDPGFPKSVIGNIAKAYQVIAFMN*
Ga0068853_1022509511	3300005539	Corn Rhizosphere	DAVEKLDFEQALGGHGDVMRGKEKFEMWKSYFRDLLDETGEAYSNGASLEQVQSQVSKALIAKYAAKFDPNFPQSVNANIAKAYQVIAMAR*
Ga0068853_1024546861	3300005539	Corn Rhizosphere	FDWIQTLDTAEKLDFDQALGGHGDVLHGKEKFELWKAYFRDLLNETARIYGEGASLEEAQKQVSTILIARYASKFDPNFPRSVGANVSKAYQVISQAR*
Ga0070686_1010369891	3300005544	Switchgrass Rhizosphere	KFELWKAYFRDLLNETARIYGEGASLEEAQKQVSTILIARYASKFDPNFPRSVGANVSKAYRVISQAR*
Ga0070693_1007861332	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	TLDTAEKLDFDQTLGGHGDIMHGKEKFELWKAYFGDLMEQTAQVYSDGATLEEAQKKVSAWLVAKYADKFDPAFPRSVGANVAKAYQVVAQP*
Ga0066692_101784852	3300005555	Soil	MHGKEKFELWKQYFRDLLDETGQAYARGANLDDAQKQLAKVLIPKYADKFDPGFPKSVIGNIAKAYQVIAFMN*
Ga0066704_109047461	3300005557	Soil	GGHGDVMHGKEKFELWKQYFRDLLDETGQAYARGANLDDSQKQVAKALIPKYADKFDPGFPKSVIGNIAKAYQVIAFMN*
Ga0066694_100546851	3300005574	Soil	KLDFDQVIGGHGDVMRGKERFELWKHYFRDLMDEAAQAYARGASLEDAEKGVSKTLIAKYADRFDPGFPKSVIGNIAKAYQVIAFMP*
Ga0070761_107798602	3300005591	Soil	GGHGDVMRGKEKFELWKQYLRDLMDETAKSYSSGANLEEAQRQVAKVLVPKYADKFDPAFPKSVTANITKAYQVIAFAN*
Ga0097621_1010607062	3300006237	Miscanthus Rhizosphere	GGIMKGKEKFELWKAYFGDLMEQTAQVYADGATADEAQKKVSAWLVAKYGDKFDPAFPQSVGANVAKAYSVVAQR*
Ga0097621_1013466052	3300006237	Miscanthus Rhizosphere	DIALGGHGDVMHGKEKFEMWKAYFRDLLDETGEAYSNGASLEQAQSQVSKALIAKYAAKFDPNFPQSVNANIAKAYQVIAMAR*
Ga0075021_100593382	3300006354	Watersheds	YFHDLMEETAKSYSNGASLEDAQKQVSKILIANYASKFDPNFPQSVGANVTKAYQTIAQAK*
Ga0068871_1003187892	3300006358	Miscanthus Rhizosphere	MADSYPFDWIRTLDAVEKLDFEQALGGHGDVMRGKEKFEMWKSYFRDLLDETGEAYSNGASLEQAQSQVSKALIAKYAAKFDPNFPQSVNANIAKAYQVIAMAR*
Ga0066660_102956471	3300006800	Soil	MRGKERFELWKHYFRDLMDEAAQAYARGASLEDAEKGVSKTLIAKYADRFDPGFPKSVIGNIAKAYQVIAFMP*
Ga0075424_1014666061	3300006904	Populus Rhizosphere	DVMRGKEKFEMWKSYFRDLLDQTGEAYSNGASLEQAQSQVSKALIAKYAARFDPNFAQSVNANIAKAYQVIAMAR*
Ga0079219_124095661	3300006954	Agricultural Soil	TLDTAEKLDFDQSLGGHGGVMRGKEKFELWKAYFGDLMEQTAQVYADGATLEEAQKKVSAWLVAKYADKFDPAFPQSVGANVVKAYQVVAQR*
Ga0066710_1003606073	3300009012	Grasslands Soil	RIEIVRDLLDETAQAYARGASLDDAEKEVSKILVTKYAGKFDPSFPQSVIGNIAKAYQVISFMR
Ga0066710_1010687341	3300009012	Grasslands Soil	HGDVMHGKEKFELWKQYFRDLLDETGQAYARGANLDDAQKQVAKALIPKYADKFDPGFPKSVIGNIAKAYQVIAFMN
Ga0105245_108817753	3300009098	Miscanthus Rhizosphere	ELWKTYFRDLLEETGRIYGQGASLEEAQKQVSTILIAKYASKFDPNFPRSVTANVTKAYQVISLAR*
Ga0066709_1012484411	3300009137	Grasslands Soil	NAEKLDFDQVIGGHGDVMHGKEKFELWKQYFRDLLDETGQAYARGANLDDAQKQVAKALIPKYADKFDPGFPKSVIGNIAKAYQVIAFMN*
Ga0066709_1029704241	3300009137	Grasslands Soil	FEMWKAYFRDLLDETGEAYSNGASLEQAQSQVSKTLIAKYAAKFDPNFPQSINANIAKAYQVIDMPR*
Ga0105242_102301341	3300009176	Miscanthus Rhizosphere	EMWKSYFRDLLDETGEAYSNGASLEQAQSQVSKALIAKYAAKFDPNFPQSVNANIAKAYQVIAMAR*
Ga0105237_120413641	3300009545	Corn Rhizosphere	DWIQTLDTAEKLDFDQALGGHGDVLHGKEKFELWKAYFRDLLNETARIYGEGASLEEAQKQVSTILIARYASKFDPNFPRSVGANVSKAYQVISQAR*
Ga0116136_10017997	3300009547	Peatland	MQGKQKFELGKQYFRDLLQETAQSYAQGDTREEAAKRVAKILVRNYADKFDPGFPEDVVGNIAKAYQVIAFMQ*
Ga0126380_117932361	3300010043	Tropical Forest Soil	DVMHGKEKFELWKAYFRDLLDETARVYGNGASLEDAQRQVAKTLISKYATKFDPNFPQSVTANVTKAYQVIAQAR*
Ga0134065_100253741	3300010326	Grasslands Soil	HYFRDLMDEAAQAYARGASLEDAEKGVSKTLIAKYADRFDPGFPKSVIGNIAKAYQVIAFMP*
Ga0134062_100698233	3300010337	Grasslands Soil	LDFDQVIGGHGDVMRGKERFELWKHYFRDLMDEAAQAYARGASLEDAEKGVSKTLIAKYADRFDPGFPKSVIGNIAKAYQVIAFMP*
Ga0126370_102304182	3300010358	Tropical Forest Soil	LGGHGDVMHGKQTFELWKAYFRDLLDDTARIYGEGASLEEAQKQVSTVLIAKYASKFDPDFAHSVTANVTKAYQVISQAR*
Ga0126370_108660141	3300010358	Tropical Forest Soil	WIQTLDAAERLDFDQALGGHGDVMHGKEKFELWKAYFRDLLGETARTYGEGASLEEAQQQVSATLIGKYASKFDRDFPHSVTANVTKAYQVISQAR*
Ga0126370_116170411	3300010358	Tropical Forest Soil	QVIGGHGDVMRGKQRFDVWKQYFRDLLDQTAQAYARGASLEDTEKEVSRILIPKYVDKFDSGFSQGVIGNIAKAYQVIAFMQ*
Ga0126370_120212951	3300010358	Tropical Forest Soil	KQTFELWKAYFRDLLDDTGRVYGEGASLEEAQKQVSTLLIAKYASKFDPNFAHSVTPNVTKAYQVISQAH*
Ga0126376_131749031	3300010359	Tropical Forest Soil	DVMRGKQRFELWKQYFRDLMAETGQAYARGASLEDAEKEVSKALAGKYADKFDPGFPQSVTGNIAKAYQVIASMP*
Ga0126378_113527982	3300010361	Tropical Forest Soil	GGHGDVMRGKERFELWKQYFRDLMDETAKAYAQGASLDEAERDVSKILRVKYVDKFDPRFPQSVIGNIAKAYQVIAFMQ*
Ga0126379_125527082	3300010366	Tropical Forest Soil	EKLDFDQALGGHGDVMQGKQTFELWKAYFRDLLDDTARIYGDCASLEEAQKQVSTFLIAKYASKFDPDFAHSVTANVTKAYQVISQAR*
Ga0126381_1013839983	3300010376	Tropical Forest Soil	FRDLLDDTARVYGEGASLEEAQKQVSTFLIAKYASKFDPNFAHSVTANVTKAYQVISQAR
Ga0126381_1039772251	3300010376	Tropical Forest Soil	DVMQGKQTFELWKAYFRDLLDDTGRVYGEGASLEEAQKQVSTLLIAKYASKFDPNFAHSVTANVTKAYQVISQAH*
Ga0126383_133390711	3300010398	Tropical Forest Soil	SVCGDALHGWTPFMADSYPYEWIQTLDAAEKLDFDQALGGHGDIMHGKQKFELWKAYFHDLLDETAQVYSSGASLEDAQKQVSKTLMEKYASKFDPAFPQSVTANVTKAYQVIAMAH*
Ga0105246_122442161	3300011119	Miscanthus Rhizosphere	EKLDFDQTLGGHGDIMHGKEKFELWKTYFGDLMEQTAQVYADGATLEEAQKKVSAWLVAKYADKFDPAFPRSVGANVAKAYQVVAQP*
Ga0137388_120264501	3300012189	Vadose Zone Soil	TLDAVEKLDFDIALGGHGDVMHGKEKFEMWKAYFHDLLDETGEAYSKGASLEQTQSQVSKTLIAKYASKFDPNFPQSVGANIAKAYQVIAMAR*
Ga0137382_113023121	3300012200	Vadose Zone Soil	LWKQYFRDLLDETGQAYARGANLDDAQKQLAKVLIPKYADKFDPGFPKSVIGNIAKAYQVIAFMN*
Ga0137362_100134047	3300012205	Vadose Zone Soil	GGHGDVMHGKEKFELWKQYFRDLLDETGQAYARGANLDDAQKQLAKVLIPKYADKFDPGFPKSVIGNIAKAYQVIAFMN*
Ga0137381_102071062	3300012207	Vadose Zone Soil	GDSYPFDCIHTLDAAEKLDFDQVIGGHGDVMRGKERFELWKHYFGDLMDEAAQAYARGASLEDAEKGVGKTLIAKYADRFDPGFPKSVIGNIAKAYQVIAFMP*
Ga0137360_111917331	3300012361	Vadose Zone Soil	SYPFDWIQTLDAAEKLDFDQVIGGHGDVMRGKERFELWKHYFGDLMDEAAQAYARGASLEDAEKGVGKTLIAKYADRFDPGFPKSVIGNIAKAYQVIAFMP*
Ga0150984_1182518232	3300012469	Avena Fatua Rhizosphere	GGHGDVMRGKEKFELWKSYFRDLLDETARIYGGGASLEEAQKQVSTILIGKYASRFDPNFPRSVTANVTKAYQVISQAQ*
Ga0137358_102629181	3300012582	Vadose Zone Soil	TLDNAEKLDFDQVIGGHGDVMHGKEKFELWKQYFRDLLDETGQAYARGANLDDAQKQIAKVLIPKYADKFDPGFPKSVIGNIAKAYQVIAFMN*
Ga0137358_108693461	3300012582	Vadose Zone Soil	TLDNAEKLDFDQVIGGHGDVMHGKEKFELWKQYFRDLLDETGQAYARGATLDDAQKQLAKVLIPKYADKFDPGFPKSVIGNIAKAYQVIAFMN*
Ga0137359_108678902	3300012923	Vadose Zone Soil	LLDETGQAYARGANLDDAQKQLAKVLIPKYADKFDPGFPKSVIGNIAKAYQVIAFMN*
Ga0137419_100658053	3300012925	Vadose Zone Soil	FVFLPNEKFIATGDALHGWTPFMGVSYPYEWIQTLDASEKLDFHSVLGGHRDVMHGKLRFELWKQYFQNLMDRTAAAYAEGASLDQAQKTVSAFLTKKYAAQFDPNFPKSVTANVTKAYQVIAFPR*
Ga0137404_110850691	3300012929	Vadose Zone Soil	LDNAEKLDFDQVIGGHGDVMHGKEKFELWKQYFRDLLDETGQAYARGANLDDTQKQLAKVLIPKYADKFDPGFPKSVIGNIAKAYQVIAFMN*
Ga0137404_121609731	3300012929	Vadose Zone Soil	GDALHGWTPFMADSYPFDWIRTLDAVEKLDFDIALGGHGDVMHGKEKFEMWKAYFRDLLDETGEAYSKGATFEQAQSQVSKTLIAKYASKFDPNFPQSVGANIAKAYQVIAMAR*
Ga0137407_105086942	3300012930	Vadose Zone Soil	ITTLDNAEKLDFDQVIGGHGDVMHGKEKFELWKQYFRDLLDETGQAYARGANLDDAQKQLAKVLIPKYADKFDPGFPKSVIGNIAKAYQVIAFMN*
Ga0137407_121214231	3300012930	Vadose Zone Soil	TLDNAEKLDFDQVIGGHGDVMHGKEKFELWKQYFRDLLDETAQAYARGANLDDAQKQLAKVLIPKYADKFDPGFPKSVIGNIAKAYQVIAFMN*
Ga0134079_106461111	3300014166	Grasslands Soil	LWKHYFRDLMDEAAQAYARGASLEDAEKGVSKTLIAKYADRFDPGFPKSVIGNIAKAYQVIAFMP*
Ga0137409_115575651	3300015245	Vadose Zone Soil	GWTPFMADSYPYEWIQTLDAVEKLDFDQALGGHGDVMHGKEKFELWKAYFHDLMDETAKVYSGGASLEDAQKEVSKTLTTKYASKFDPAFPQSVTANVTKAYPFEDPVTLRGIVVPLIGQRAK*
Ga0137403_109070041	3300015264	Vadose Zone Soil	HGKEKFELWKQYFRDLLDETAQAYARGANLDDAQKQLAKVLIPKYADKFDPGFPKSVIGNIAKAYQVIAFMN*
Ga0132257_1001677123	3300015373	Arabidopsis Rhizosphere	DTAEKLDFDQTLGGHGGIMKGKEKFELWKAYFGDLMEQTAQVYADGATADEAQKKVSAWLVAKYGDKFDPAFPQSVGANVAKAYSVVAQR*
Ga0132257_1010360602	3300015373	Arabidopsis Rhizosphere	EKFELWKTYFRDLLEETGRIYGQGASLEEAQKQVSTILIAKYASKFDPNFPRSVTANVTKAYQVISLAR*
Ga0132255_1004697553	3300015374	Arabidopsis Rhizosphere	PYDWIQTLDTAEKLDFDLVLGGHGDVMHGKQKFELWKEYFGDLMEQTAQAYAQGATLDDAQKKLSPWLVAKYADKFDPGFSHDVGGNIAKAYQVIAMH*
Ga0182035_104514751	3300016341	Soil	DSYPYDWIQTLDAAEKLDFDQALGGHGDVMRGKERFELWKQYFRDLMDETAKAYAQGASLDEAERDVSKILRVKYVDKFDPRFPQSVIGNIAKAYQVIAFMQ
Ga0182035_117767951	3300016341	Soil	TIDAAEKIGFDFVIGGHGDVIHGKERFELWKRYFQDLLDQTASAYSQGASLDDAKKTVSEFLIKKYADKFDPAFPQSVLGNISKAYQVIALAR
Ga0182032_110272521	3300016357	Soil	FELWKQYFRDLMDETAKAYAQGASLDEAERDVSKILRVKYVDKFDPRFPQSVIGNIAKAYQVIAFMQ
Ga0187856_100084420	3300017925	Peatland	MQGKQKFELGKQYFRDLLQETAQSYAQGDTREEAAKRVAKILVRNYADKFDPGFPEDVVGNIAKAYQVIAFMQ
Ga0187776_106638721	3300017966	Tropical Peatland	GHGDVMRGKQKFELWKEYLSDLLSQTAEAYARGASEEEAEKQVAPPLVAKYASRFDPKFAQSVTGNIAKAYEVIAQR
Ga0187885_102240091	3300018025	Peatland	EVMQGKQKFELGKQYFRDLLQETAQSYAQGDTREEAAKRVAKILVRNYADKFDPGFPEDVVGNIAKAYQVIAFMQ
Ga0187766_105516481	3300018058	Tropical Peatland	SYPFDWIKTLDAAEKLDFTQALGGHGDVMQGKEKFELWKQYFRDLLDDTAQSYSNGASLEDAQKQVSKELIAKYAAKFDPAFPQSVIANVTKAYQTIAQAH
Ga0066669_117242772	3300018482	Grasslands Soil	DWIQTLDAAEKLDFDQVIGGHGNVMRGKERFDLWKHYFRDLLHEAAQAYARGASLEDAEKGISKTLIAKYSDKFDPGFPKSVIGNIAKAYQVIAFMP
Ga0193715_11176271	3300019878	Soil	LDAAERLDFEQVLGGHGDVMHGKEKFELWKAYFRDLLDETAQIYGKGASLEDAQKQVSETLLGKYASKFDPNFRKSVTANITKAYQVIAQAR
Ga0210396_107574182	3300021180	Soil	SFPYDWITTLDKAEKLDFDQVLGGHGDVMHGKERFELWKAYFTDLMAETGKAYANGATLEQAQEQVSKILIPKYASKFDPAFPHDMIPNVTKAYEVIAFPK
Ga0210388_113894001	3300021181	Soil	DFDQVLGGHGDVMHGKERFELWKQYFTDLMAETGKAYANGATLEQAQEQVSKILIPKYSAKFDPAFPHDMIPNVTKAYQVIAFPK
Ga0210388_118167661	3300021181	Soil	GKEKFELWKQYFRDLMDQTAQAYASGANLEEAQKQIAKVLVPKYADKFDPAFPKSVTANITKAYQVIAFAN
Ga0210393_112069522	3300021401	Soil	LGGHGDVMHGKEKFDMWKQYFTDLMAETGKAYGDGATLEQAQAQVSKILIAKYSSKFPPTFPQDVIPNVTKAYQVIAFPK
Ga0210397_107991263	3300021403	Soil	EKFELWKQYFRDLMDETAQAYSSGASLEEAQKQVAKVLVPKYAAKFDPAFPKSVIANITKAYEVIAFAN
Ga0210397_109141492	3300021403	Soil	DFDQGLGGHGDVMHGKEKFEMWKQYFTDLMAETGKAYGDGATLEQAPAQVSKILIAKYSSKFPPTFPQDVIPNVTKAYQVIAFPK
Ga0210386_102418601	3300021406	Soil	DVMHGKERFELWKAYFTDLMAETGKAYANGATLEQAQEQVSKILIPKYASKFDPAFPHDMIPNVTKAYEVIAFPK
Ga0210386_105760953	3300021406	Soil	LGGHGDVMRGKEKFELWKQYFRDLMDQTAQAYASGANLEEAQKQIAKVLVTKYADKFDPAFPKSVTANITKAYQVIAFAN
Ga0210386_110513712	3300021406	Soil	TLDKAEKLDFDQVLGGHGDVMRGKEKFELWKQYLRDLMDQTAQAYSSGASLEEAQKQLAKVLLPKYADKFDPAFPKSVIANITKAYQVIAFAN
Ga0210394_109489032	3300021420	Soil	LGGHGDVMRGKEKFELWKQYLRDLMDETAKSYSSGANLEEAQKQVAKVLVPKYADKFDPAFPKSVTANITKAYQVIAFAN
Ga0242649_10743042	3300022509	Soil	KQYLRDLMDETAKSYSSGANLEEAQKQVAKVLVPKYADKFDPAFPKSVTANITKAYQVIAFAN
Ga0207707_107651101	3300025912	Corn Rhizosphere	WIQTLDAAEKLDFDQALGGHGDVMRGKEKFELWKTYFRDLLEETGRIYGQGASLEEAQKQVSTILIAKYASKFDPNFPRSVTANVTKAYQVISLAR
Ga0207652_101454692	3300025921	Corn Rhizosphere	WIQTLDTAEKLDFDQALGGHGDVLHGKEKFELWKAYFRDLLNETARIYGEGASLEEAQKQVSTILIARYASKFDPNFPRSVGANVSKAYQVISQAR
Ga0207694_111856482	3300025924	Corn Rhizosphere	RGKEKFELWKTYFRDLLEETGRIYGQGASLEEAQKQVSTILIAKYASKFDPNFPRSVTANVTKAYQVISLAR
Ga0207650_100117751	3300025925	Switchgrass Rhizosphere	LDTAEKLDFDQALGGHGDVLHGKEKFELWKAYFRDLLNETARIYGEGASLEEAQKQVSTILIARYASKFDPNFPRSVGANVSKAYQVISQAR
Ga0207701_101673782	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	RDLLNETARIYGEGASLEEAQKQVSTILIARYASKFDPNFPRSVGANVSKAYQVISQAR
Ga0207686_105051001	3300025934	Miscanthus Rhizosphere	GHGDVMRGKEKFEMWKSYFRDLLDETGEAYSNGASLEQAQSQVSKALIAKYAAKFDPNFPQSVNANIAKAYQVIAMAR
Ga0207669_107105041	3300025937	Miscanthus Rhizosphere	HGKDKFELWKAYFHDLLDETAKVYGDGASLEDAKTQVSKTLVAKYASRFDPDFPKSVGANVTKAYQVIAQAH
Ga0207651_107121071	3300025960	Switchgrass Rhizosphere	TAEKLDFDQALGGHGGIMKGKEKFELWKAYFGDLMEQTAQVYADGASSDEAQKKVSAWLVAKYGDKFDPAFPKSVGANVAKAYSVVAQR
Ga0207639_122260801	3300026041	Corn Rhizosphere	YTFDWIQTLDTAEKLDFDQALGGHGVVLHGKEKFELWKAYFRDLLNETARIYGEGASLEEAQKQVSTILIARYASKFDPNFPRSVGANVSKAYQVISQAR
Ga0209268_10400253	3300026314	Soil	FDWIQTLDAAEKLDFDQVIGGHGNVMRGKERFDLWKHYFRDLMDEAAQAYARGASLEDAEKGVSKTLIAKYADRFDPGFPKSVIGNIAKAYQVIAFMP
Ga0209802_12314112	3300026328	Soil	GNVMRGKERFDLWKHYFRDLLDEAAQAYARGASLEDAEKGVSKTLIAKYSDKFDPGFPKSVIGNIAKAYQVIAFMP
Ga0209160_10365904	3300026532	Soil	GGHGDVMHGKEKFELWKQYFRDLLDETGQAYARGANLDDSQKQVAKALIPKYADKFDPGFPKSVIGNIAKAYQVIAFMN
Ga0208099_10259441	3300027096	Forest Soil	DVMHGKEKFELWKQYFRDLLAETGQAYASGASLQEAQKQVAKILVPRYAAKFDPAFPQSLTANITKAYQVIAFAN
Ga0209114_11083132	3300027504	Forest Soil	DQVLGGHGDVMHGKERFELWKAYFTDLMAETGKAYANGATLEQAQEQVSKILIPKYASKFDPAFPHDMIPNVTKAYEVIAFPK
Ga0209218_10987162	3300027505	Forest Soil	KAEKLDFDQVLGGHGDVMHGKERFELWKAYFTDLMAETGKAYANGATLEQAQEQVSKILIPKYASKFDPAFPHDMIPNVTKAYEVIAFPK
Ga0209038_101435111	3300027737	Bog Forest Soil	EKFELWKQYLRDLMDETAKAYASGSNLEEAQKQVAKVLVPKYADKFDPAFPKSVTANITKAYQVIAFPN
Ga0209656_104218662	3300027812	Bog Forest Soil	EKLDFDQVLGGHGDVMRGKEKFELWKQYLRDLMDQTAQAYSSGANLEEAQKQVAKVLVPKYADKFDPNFPKSVTANITKAYQVIAFPN
Ga0209167_106634751	3300027867	Surface Soil	LDNAEKLDFDQVLGGHGDVMHGKEKFELWKQYLRDLMDETAKSYSSGANLEEAQKQVAKVLVPKYADKFDPAFPKSVTANITKAYQVIAFAN
Ga0209068_107598932	3300027894	Watersheds	AAEKLDFDQVIGSHGDVMKGKQKFELWKEYFAELMKQTGQAYAEGATLEQAQERVAQLLTTKYADKFDPTFSQSVVSNVAKAYQVIAFMH
Ga0209006_105421491	3300027908	Forest Soil	KEKFELWKQYLRDLMDETAKSYSSGANLEEAQKQVAKVLVPKYADKFDPAFPKSVTANITKAYQVIAFAN
Ga0308309_105636423	3300028906	Soil	MHGKEKFDMWKQYFTDLMAETGKAYGDGATLEQAQAQVSKILIAKYSSKFPPTFPQDVIPNVTKAYQVIAFPK
Ga0170824_1054153231	3300031231	Forest Soil	ALGGHGDVMHGKEKFELWKAYFHDLLDETAHVYGNGASLEDAQIQVSKTLIAKYASKFDPNFPQSMIANITKAYQVIAQAR
Ga0318542_103921492	3300031668	Soil	QYFHDLMDETARAYARGASLDDAEKEVSKILAAKYADKFDPDFLQSVIGNVAKAYQVIAFMH
Ga0307476_108315751	3300031715	Hardwood Forest Soil	WKQYFRDLMDQTAQAYASGANLEEAQKQIAKVLVPKYADKFDPAFPKSVTANITKAYQVIAFAN
Ga0310813_102366981	3300031716	Soil	LDFDQALGGHGDVLHGKEKFELWKAYFRDLLNETARIYGEGASLEEAQKQVSTILIARYASKFDPNFPRSVGANVSKAYQVISQAR
Ga0307479_112191972	3300031962	Hardwood Forest Soil	TTLDNAEKLDFDQVLGGHGDVMHGREKFELWKQYFRDLLAETGQAYASGANLEETKKQVAKVLVAKYAAKFDPDFPKNVTANITKAYQVIAFPN
Ga0318577_102971341	3300032091	Soil	DFNQVIGGHGDVMRGKEKFELWKQYFRDLMDETARAYARGASLDDAEKEVSKILAAKYADKFDPDFLQSVIGNVAKAYQVIAFMH
Ga0307470_105384112	3300032174	Hardwood Forest Soil	DQVLGGHGDVMHGREKFELWKQYFRDLLAETGQAYASGANLEETKKQVAKVLVAKYAAKFDPDFPKNVTANITKAYQVIAFPN
Ga0307470_107968571	3300032174	Hardwood Forest Soil	LDFTQALGGHGDVMHNKDKFEMWKQYFHDLMEETAKSYSNGASLEDAQKQVSKILIANYSAKFDPAFPQSVIPNITKAYQTIAQAH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055803

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences