Metagenome / Metatranscriptome Family F055940

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055940
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	67 residues
Representative Sequence	NIASSANPLSSPQGLNTVAHMLADGTITARIRSMVELDGAGQLLEQLRNGGLRGKAVIRL
Number of Associated Samples	102
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.46 %
% of genes near scaffold ends (potentially truncated)	97.10 %
% of genes from short scaffolds (< 2000 bps)	90.58 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.449 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (21.739 % of family members)
Environment Ontology (ENVO)	Unclassified (23.913 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (61.594 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.68% β-sheet: 0.00% Coil/Unstructured: 69.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00196	GerE	3.62
PF04261	Dyp_perox	2.90
PF02467	Whib	2.90
PF01244	Peptidase_M19	2.90
PF00326	Peptidase_S9	2.90
PF00582	Usp	2.17
PF02586	SRAP	2.17
PF13577	SnoaL_4	2.17
PF12831	FAD_oxidored	1.45
PF06480	FtsH_ext	1.45
PF00005	ABC_tran	1.45
PF03069	FmdA_AmdA	1.45
PF07995	GSDH	1.45
PF02955	GSH-S_ATP	1.45
PF03972	MmgE_PrpD	1.45
PF03663	Glyco_hydro_76	1.45
PF01557	FAA_hydrolase	0.72
PF03479	PCC	0.72
PF01145	Band_7	0.72
PF02852	Pyr_redox_dim	0.72
PF07228	SpoIIE	0.72
PF05977	MFS_3	0.72
PF00909	Ammonium_transp	0.72
PF02625	XdhC_CoxI	0.72
PF02720	DUF222	0.72
PF04978	DUF664	0.72
PF00563	EAL	0.72
PF00528	BPD_transp_1	0.72
PF13460	NAD_binding_10	0.72
PF01381	HTH_3	0.72
PF02776	TPP_enzyme_N	0.72
PF13416	SBP_bac_8	0.72
PF00296	Bac_luciferase	0.72
PF14534	DUF4440	0.72
PF00210	Ferritin	0.72
PF02738	MoCoBD_1	0.72
PF07690	MFS_1	0.72
PF12844	HTH_19	0.72
PF01266	DAO	0.72
PF01544	CorA	0.72
PF03928	HbpS-like	0.72
PF02577	BFN_dom	0.72
PF14378	PAP2_3	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0189	Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily	Translation, ribosomal structure and biogenesis [J]	2.90
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	2.90
COG2837	Periplasmic deferrochelatase/peroxidase EfeB	Inorganic ion transport and metabolism [P]	2.90
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	2.17
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	1.45
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	1.45
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	1.45
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	1.45
COG4833	Predicted alpha-1,6-mannanase, GH76 family	Carbohydrate transport and metabolism [G]	1.45
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	0.72
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.72
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	0.72
COG1661	Predicted DNA-binding protein with PD1-like DNA-binding motif, PPC/DUF296 domain	General function prediction only [R]	0.72
COG1975	Molybdoenzyme maturation factor PaoD (Mo cofactor insertion), XdhC/CoxF family	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.72
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.72
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.72
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.72
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.72
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.17 %
Unclassified	root	N/A	47.83 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.17 %
Unclassified	root	N/A	47.83 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.45 %
Unclassified	root	N/A	47.83 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	23.91 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.07 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.35 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23.91 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.62 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.45 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19.57 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.90 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.45 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.72 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.72 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	2.17 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.45 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.45 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.72 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.72 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.72 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.72 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.72 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.72 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.72 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.17 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.45 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	0.72 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.72 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.72 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.72 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.72 %
Cellulomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae	0.72 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.72 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.17 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.45 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.72 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.72 %
unclassified Acidobacterium	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium	0.72 %
Subtercola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Subtercola	0.72 %
Microlunatus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	0.72 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.72 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.72 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.45 %
Pseudomonas sp. JUb42	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. JUb42	0.72 %
Subtercola boreus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Subtercola → Subtercola boreus	0.72 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.72 %
Acidobacterium sp. S8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	0.72 %
Bradyrhizobium sp. 2S1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 2S1	0.72 %
Nocardia cerradoensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia cerradoensis	0.72 %
Microlunatus phosphovorus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	0.72 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.72 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.83 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.17 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.45 %
Streptomyces sp. SID5926	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. SID5926	0.72 %
Pseudomonas sp. JUb42	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. JUb42	0.72 %
Subtercola boreus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Subtercola → Subtercola boreus	0.72 %
Acidobacterium sp. S8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	0.72 %
Bradyrhizobium sp. 2S1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 2S1	0.72 %
Nocardia cerradoensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia cerradoensis	0.72 %
Microlunatus phosphovorus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	0.72 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.72 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	0.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.72 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001619\|JGI20250J16331_104573	Not Available	521	Open in IMG/M
3300002245\|JGIcombinedJ26739_100512507	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300002245\|JGIcombinedJ26739_101189836	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300004082\|Ga0062384_100172996	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300004092\|Ga0062389_103245349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	609	Open in IMG/M
3300004092\|Ga0062389_103405160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	596	Open in IMG/M
3300004092\|Ga0062389_104784135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	510	Open in IMG/M
3300004635\|Ga0062388_101111716	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	776	Open in IMG/M
3300004635\|Ga0062388_101931790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	609	Open in IMG/M
3300005466\|Ga0070685_11295724	Not Available	556	Open in IMG/M
3300005591\|Ga0070761_10302675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	962	Open in IMG/M
3300005712\|Ga0070764_10664442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	640	Open in IMG/M
3300005921\|Ga0070766_10737214	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300005921\|Ga0070766_11058648	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300005995\|Ga0066790_10306585	Not Available	677	Open in IMG/M
3300006175\|Ga0070712_100214478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1520	Open in IMG/M
3300006175\|Ga0070712_101878921	Not Available	524	Open in IMG/M
3300006176\|Ga0070765_100134547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2186	Open in IMG/M
3300006176\|Ga0070765_100322998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1430	Open in IMG/M
3300006854\|Ga0075425_102521889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia cerradoensis	569	Open in IMG/M
3300009101\|Ga0105247_10307361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1102	Open in IMG/M
3300009545\|Ga0105237_11169054	Not Available	776	Open in IMG/M
3300009553\|Ga0105249_10815999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	997	Open in IMG/M
3300009672\|Ga0116215_1354157	Not Available	636	Open in IMG/M
3300010371\|Ga0134125_10939272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	949	Open in IMG/M
3300010379\|Ga0136449_102911866	Not Available	672	Open in IMG/M
3300010379\|Ga0136449_103945932	Not Available	555	Open in IMG/M
3300010396\|Ga0134126_12500804	Not Available	561	Open in IMG/M
3300012955\|Ga0164298_10073402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. JUb42	1729	Open in IMG/M
3300013306\|Ga0163162_10562264	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	1268	Open in IMG/M
3300014199\|Ga0181535_10813091	Not Available	529	Open in IMG/M
3300014201\|Ga0181537_10523713	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300014489\|Ga0182018_10767976	Not Available	500	Open in IMG/M
3300014495\|Ga0182015_10125178	All Organisms → cellular organisms → Bacteria → Acidobacteria	1763	Open in IMG/M
3300014495\|Ga0182015_10539617	Not Available	743	Open in IMG/M
3300014657\|Ga0181522_10853915	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium → unclassified Acidobacterium → Acidobacterium sp. S8	560	Open in IMG/M
3300014968\|Ga0157379_11572267	Not Available	641	Open in IMG/M
3300017821\|Ga0187812_1150059	Not Available	751	Open in IMG/M
3300017822\|Ga0187802_10246032	Not Available	692	Open in IMG/M
3300017822\|Ga0187802_10370745	Not Available	564	Open in IMG/M
3300017924\|Ga0187820_1100403	Not Available	832	Open in IMG/M
3300017937\|Ga0187809_10186938	Not Available	730	Open in IMG/M
3300017937\|Ga0187809_10339356	Not Available	561	Open in IMG/M
3300017942\|Ga0187808_10293062	Not Available	733	Open in IMG/M
3300017970\|Ga0187783_10999014	Not Available	603	Open in IMG/M
3300018014\|Ga0187860_1293701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 2S1	632	Open in IMG/M
3300018034\|Ga0187863_10725118	Not Available	562	Open in IMG/M
3300018037\|Ga0187883_10276502	Not Available	858	Open in IMG/M
3300018037\|Ga0187883_10532031	Not Available	607	Open in IMG/M
3300018047\|Ga0187859_10552005	Not Available	645	Open in IMG/M
3300019268\|Ga0181514_1312066	Not Available	570	Open in IMG/M
3300020579\|Ga0210407_10606276	All Organisms → cellular organisms → Eukaryota → Opisthokonta	853	Open in IMG/M
3300020581\|Ga0210399_11246009	Not Available	588	Open in IMG/M
3300021180\|Ga0210396_10255609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1557	Open in IMG/M
3300021180\|Ga0210396_10789070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	816	Open in IMG/M
3300021180\|Ga0210396_11009033	Not Available	705	Open in IMG/M
3300021402\|Ga0210385_11025049	Not Available	634	Open in IMG/M
3300021402\|Ga0210385_11347195	Not Available	546	Open in IMG/M
3300021406\|Ga0210386_10150221	All Organisms → cellular organisms → Bacteria → Proteobacteria	1948	Open in IMG/M
3300021433\|Ga0210391_10412018	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300021433\|Ga0210391_10443961	Not Available	1018	Open in IMG/M
3300021474\|Ga0210390_10014044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6507	Open in IMG/M
3300021474\|Ga0210390_11464216	Not Available	542	Open in IMG/M
3300021475\|Ga0210392_10021538	All Organisms → cellular organisms → Bacteria	3664	Open in IMG/M
3300021477\|Ga0210398_10167111	Not Available	1791	Open in IMG/M
3300021477\|Ga0210398_10461254	Not Available	1035	Open in IMG/M
3300022840\|Ga0224549_1053304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	551	Open in IMG/M
3300023250\|Ga0224544_1030309	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300023265\|Ga0247780_1230871	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	504	Open in IMG/M
3300024227\|Ga0228598_1004555	All Organisms → cellular organisms → Bacteria	2933	Open in IMG/M
3300025915\|Ga0207693_10169180	All Organisms → cellular organisms → Bacteria	1721	Open in IMG/M
3300027080\|Ga0208237_1043709	Not Available	672	Open in IMG/M
3300027110\|Ga0208488_1001257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4767	Open in IMG/M
3300027165\|Ga0208608_105007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	820	Open in IMG/M
3300027334\|Ga0209529_1094808	Not Available	506	Open in IMG/M
3300027575\|Ga0209525_1093783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	712	Open in IMG/M
3300027674\|Ga0209118_1065836	Not Available	1050	Open in IMG/M
3300027768\|Ga0209772_10231390	Not Available	586	Open in IMG/M
3300027812\|Ga0209656_10511891	Not Available	523	Open in IMG/M
3300027829\|Ga0209773_10256563	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300027829\|Ga0209773_10483617	Not Available	510	Open in IMG/M
3300027884\|Ga0209275_10867411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	520	Open in IMG/M
3300027889\|Ga0209380_10527736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	687	Open in IMG/M
3300027895\|Ga0209624_10595649	Not Available	733	Open in IMG/M
3300027895\|Ga0209624_10623785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. SID5926	714	Open in IMG/M
3300027895\|Ga0209624_10650641	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300027895\|Ga0209624_10745992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	644	Open in IMG/M
3300028023\|Ga0265357_1016156	Not Available	793	Open in IMG/M
3300028037\|Ga0265349_1009699	Not Available	838	Open in IMG/M
3300028746\|Ga0302233_10088766	Not Available	1227	Open in IMG/M
3300028773\|Ga0302234_10040558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2130	Open in IMG/M
3300028798\|Ga0302222_10191026	Not Available	802	Open in IMG/M
3300028879\|Ga0302229_10269627	Not Available	768	Open in IMG/M
3300028906\|Ga0308309_10665678	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300028906\|Ga0308309_11040929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	708	Open in IMG/M
3300028906\|Ga0308309_11509508	Not Available	574	Open in IMG/M
3300029882\|Ga0311368_10320508	Not Available	1167	Open in IMG/M
3300029882\|Ga0311368_10385853	Not Available	1035	Open in IMG/M
3300029910\|Ga0311369_11436604	Not Available	520	Open in IMG/M
3300029943\|Ga0311340_10005708	All Organisms → cellular organisms → Bacteria	16618	Open in IMG/M
3300029993\|Ga0302304_10050855	All Organisms → cellular organisms → Bacteria → Acidobacteria	1651	Open in IMG/M
3300029997\|Ga0302302_1321384	Not Available	554	Open in IMG/M
3300029999\|Ga0311339_10278564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1816	Open in IMG/M
3300029999\|Ga0311339_10824639	Not Available	890	Open in IMG/M
3300030007\|Ga0311338_10391875	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300030053\|Ga0302177_10004042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10214	Open in IMG/M
3300030399\|Ga0311353_10032333	All Organisms → cellular organisms → Bacteria	5522	Open in IMG/M
3300030490\|Ga0302184_10060849	All Organisms → cellular organisms → Bacteria	1803	Open in IMG/M
3300030490\|Ga0302184_10088965	Not Available	1415	Open in IMG/M
3300030494\|Ga0310037_10145146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Subtercola → Subtercola boreus	1079	Open in IMG/M
3300030503\|Ga0311370_11817593	Not Available	618	Open in IMG/M
3300030509\|Ga0302183_10059046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1521	Open in IMG/M
3300030524\|Ga0311357_10112409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2719	Open in IMG/M
3300030524\|Ga0311357_11363001	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300030524\|Ga0311357_11394142	Not Available	597	Open in IMG/M
3300030580\|Ga0311355_10339586	Not Available	1492	Open in IMG/M
3300030580\|Ga0311355_11673064	Not Available	544	Open in IMG/M
3300030706\|Ga0310039_10338611	Not Available	563	Open in IMG/M
3300030740\|Ga0265460_11836189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	623	Open in IMG/M
3300030741\|Ga0265459_13532850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300030878\|Ga0265770_1090561	Not Available	610	Open in IMG/M
3300031090\|Ga0265760_10222787	Not Available	644	Open in IMG/M
3300031234\|Ga0302325_10016713	All Organisms → cellular organisms → Bacteria	15531	Open in IMG/M
3300031234\|Ga0302325_11608176	Not Available	828	Open in IMG/M
3300031234\|Ga0302325_11967353	Not Available	723	Open in IMG/M
3300031236\|Ga0302324_100943699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1180	Open in IMG/M
3300031525\|Ga0302326_11334330	Not Available	974	Open in IMG/M
3300031525\|Ga0302326_12313120	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300031573\|Ga0310915_11044261	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300031708\|Ga0310686_116245572	Not Available	797	Open in IMG/M
3300031708\|Ga0310686_119609432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1908	Open in IMG/M
3300031708\|Ga0310686_119635443	All Organisms → cellular organisms → Bacteria	8779	Open in IMG/M
3300031744\|Ga0306918_10711788	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300031754\|Ga0307475_10248837	All Organisms → cellular organisms → Bacteria → Acidobacteria	1424	Open in IMG/M
3300031754\|Ga0307475_11359696	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300032898\|Ga0335072_11108376	Not Available	713	Open in IMG/M
3300034163\|Ga0370515_0129195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	1086	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.20%
Host-Associated	Host-Associated	5.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.36%
Aquatic	Environmental → Aquatic	18.84%
Plants	Host-Associated → Plants	5.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.72%
Peat	Environmental → Terrestrial → Peat	23.91%
Freshwater	Environmental → Aquatic → Freshwater	18.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.07%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.36%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	23.91%
Loam	Environmental → Terrestrial → Soil → Loam	20.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.35%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	23.91%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.22%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	13.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.14%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.35%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.17%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	21.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.42%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	7.25%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.97%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.07%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.35%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.17%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	2.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.17%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.45%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.72%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.72%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.72%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001619	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022840	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 1-5	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300023265	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L079-202R-5	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027165	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF035 (SPAdes)	Environmental	Open in IMG/M
3300027334	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O2 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027674	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028023	Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE5	Host-Associated	Open in IMG/M
3300028037	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE1	Environmental	Open in IMG/M
3300028746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_1	Environmental	Open in IMG/M
3300028773	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_2	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028879	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300029997	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_3	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030740	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20250J16331_1045731	3300001619	Forest Soil	DAIRRDAEIVKSGGSLVSTLYAADERWFAERHITAHNIASNKNPLSSPQGLNEIARMLAVGTITARIRSAVELDGVGQMLEKLRHGGLRGKTVIRL*
JGIcombinedJ26739_1005125072	3300002245	Forest Soil	TAHNISSTNNASSTPQGLDQIVRMLADGTITARIRXTVDLNGAAQIIEKLRTGGLRGKAVIRI*
JGIcombinedJ26739_1011898361	3300002245	Forest Soil	LLSPQGLREVARMAADGTITARIGSTTQLDSAGQVLDKLRHGGLNGKAVIRP*
Ga0062384_1001729961	3300004082	Bog Forest Soil	EKWFAERGITAHNIAGNTNPLSTTRGLNEIVGMLAAETITARVRSTVGLDGAAGVIEKLKSGGLRGKAVIRI*
Ga0062389_1032453491	3300004092	Bog Forest Soil	HSSRANPLISPQGLTTVGQMLADGTITARIGSTVDLDAAGQVLEKLRHGGLNGKAIIRL*
Ga0062389_1034051601	3300004092	Bog Forest Soil	FAADEGWFADRQITALNHASSANPLISPEGLTTVAQMLADGTITARIRSTVDLDAAGQVLEQLRRGGLRGKAVIRL*
Ga0062389_1047841351	3300004092	Bog Forest Soil	TAHNHASNENPLISPQGLATVAQMLADGTITARIRSTVELTAAAQVLDDLRRGGLRGKAVIRL*
Ga0062388_1011117161	3300004635	Bog Forest Soil	PLLSPQGLTEVARMLADGTITARIRSAVELDGAGQILERLRQGGLRGKAVIRL*
Ga0062388_1019317901	3300004635	Bog Forest Soil	PLISPEGLTTVAQLLADGTITTRIRTAVDLDAAGQVLDQLRRGGLHGKAVIRL*
Ga0070685_112957242	3300005466	Switchgrass Rhizosphere	NIASSANPLSSPQGLNTVAHMLADGTITARIRSMVELDGAGQLLEQLRNGGLRGKAVIRL
Ga0070761_103026751	3300005591	Soil	ADHQITALNHASSANPLISPEGLTTVAQMLADGTITARIRSTVDLDAAGQVLEQLRRGGLRGKAVIRL*
Ga0070764_106644421	3300005712	Soil	AADEGWFAARQITAHNSASSANPFLSPPGLTEVAGMLADGTITARIRSTVGLDGVGQILEKLRQGGLRGKAVIRL*
Ga0070766_107372141	3300005921	Soil	LVSTIFAADEGWFADRKITAYNSASSANPLLSPQGLTEVAGMLADGTITSRIRSTVELDSAGQILDKLRNGGLRGKAVIRVAAEK*
Ga0070766_110586481	3300005921	Soil	NPLLSPQGLAQVARMLADGTITARIGSTTDLNGAGQVLSKLRSGGLRGKAVIRL*
Ga0066790_103065851	3300005995	Soil	GGRLVSTIFAADEKWFAERHITAQNIAGNANALSTPQGLNQLARMLADGTITARIQSTVALEGAGQILETLRKGGLRGKAVIRM*
Ga0070712_1002144781	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	TEIIKSGGSLVSTLYAADERWFADRHITAHNIASNKNPLSSPQGLSDLALMLADGTITARIRSTVELDGVAQLLEKLRHGGLRGKAVIRL*
Ga0070712_1018789211	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	SSPQGLNEVARMLADGTITARIRSTVELDGAGPMLEKLRNGGLRGKAVIRL*
Ga0070765_1001345475	3300006176	Soil	SANPLLSPQGLAQVARMLADGTVTARIGSTTDLNGAGQVLSKLRSGGLRGKAVIRL*
Ga0070765_1003229982	3300006176	Soil	RQITALNHASSANPLISPEGLTTVAQMLAHGTITARIRSTVDLDAAGQVLEQLRRGGLRGKAVIRL*
Ga0075425_1025218891	3300006854	Populus Rhizosphere	YAANEGWFAARQITAHNIASSTNPLSSPQGLSELARSLAEGTITARIRATVELAGVGQILENLRNGGLRGKAVIRLVA*
Ga0105247_103073611	3300009101	Switchgrass Rhizosphere	NPLSSPQGLNEVAHMLADGTITARIRSMVELDGAGQLLEQLRNGGLRGKAVIRL*
Ga0105237_111690542	3300009545	Corn Rhizosphere	SGGSLVSTIYAADEEWIAKRQMTAHNIASSANPLSSPQGLNTVAHMLADGTITARIRSMVELDGAGQLLEQLRNGGLRGKAVIRL*
Ga0105249_108159991	3300009553	Switchgrass Rhizosphere	RPESVAGKLAPDLASSANPLSSPHGLNEVAHMLADGTITARIRSMVELDGAGQLLEQLRNGGLRGKAVIRL*
Ga0116215_13541571	3300009672	Peatlands Soil	GGRLVSAIGAADIGWFAERQIAAQNVGPGNNPELSPQGLDDVARMLAEGTISARIRSVVELDGAGQAIEQLRHGGLHGKAIIRL*
Ga0134125_109392722	3300010371	Terrestrial Soil	SANPLSSPQGLNTVAHMLADGTITARIRSMVELDGAGQLLEQLRNGGLRGKAVIRL*
Ga0136449_1029118661	3300010379	Peatlands Soil	LVSTIFAADEGWFAKRQITARNHASSSNPLISPQGLTTVAQMLADGTITARIRSTVDLDAAGQVLEQLRRGGLRGKAVIRL*
Ga0136449_1039459321	3300010379	Peatlands Soil	KAHNIAPNSNPLESPQGLNQVARMLADGTITARIRSTVELNDAGQVLERLRNGGLSGKAVIRL*
Ga0134126_125008042	3300010396	Terrestrial Soil	TAYNISSTANPLSSPQGLNEVASMLADGTITAPIRSTVELDGAGPMLEKLRNGGLRGKAVIRL*
Ga0164298_100734021	3300012955	Soil	PLSSPQGLNTVAHMLADGTITARIRSMVELDGAGQLLEKLRNGGLRGKAVIRL*
Ga0163162_105622641	3300013306	Switchgrass Rhizosphere	RRVVAGRKITADNISSTANSLASPQGLNEVASLLADGTITARLRSTVELDRAGPMFEKLRNGGLRGKAVIRL*
Ga0181535_108130912	3300014199	Bog	LVSTIFAADEGWFAMRQITAHNIGTSANPASSPQGLSEVARMVVDGTITVRIRSIVELDGAGRMLENLRNGGLQGKAVIRV*
Ga0181537_105237132	3300014201	Bog	ESWFAERRITAANISANSNPMLSPQGLSEAARLVLEGAITARIRSVVELDGAGGMLASLRAGGLRGKAIIRP*
Ga0182018_107679762	3300014489	Palsa	AERKITAHNISSTTNTLSTPQGLNQVARMLADGTITARVIATVDLNGAAQILEKLRKGGLRGKAVIRL*
Ga0182015_101251783	3300014495	Palsa	TAHNISSTTNTLSTPQGLNQVARMLADGTITARINATVDLNGADQMLEKLRNGDVRGKAVIRL*
Ga0182015_105396171	3300014495	Palsa	GWFALRQITAHNHSSRGNPLISPQGLATVGQMLADGTITTRIGSTVDLDGAGQVLEDLHHGRLHGKAVIRL*
Ga0181522_108539151	3300014657	Bog	TAHNIAGNTNPSLSPQGLSEVARMVVDGTITARIRSMVELDGAGQILEKLRKGGLQGKAVIRL*
Ga0157379_115722671	3300014968	Switchgrass Rhizosphere	SSANPLSSPQGLNTVAHMLADGTITARIRSMVELDGAGQLLEQLRNGGLRGKAVIRL*
Ga0187812_11500592	3300017821	Freshwater Sediment	ANPLISPQSPTTVAQMLADGTITTRIQSTVDLDAAGQVLDELRHGGLRGKAVIRL
Ga0187802_102460321	3300017822	Freshwater Sediment	TAHNHASSKNPLISPKGLATVAQMLADGTITARIRSTVELAAAGQVLDELRRGGLRGKAVIRL
Ga0187802_103707451	3300017822	Freshwater Sediment	SSANPLISPQGLATVAQMLADGTITARIGSTAGLDAAGQILDELRHGGLRGKAVIRL
Ga0187820_11004032	3300017924	Freshwater Sediment	STIFAADEGWFAQRQITAHNHASSANPLISPQGLATVAQMLADGTITARIRSTAGLDAAGQILDDLRHGGLRGKAVIRL
Ga0187809_101869382	3300017937	Freshwater Sediment	TAHNHASSANPLISPEGLATVAQMLADGTITARIGSTVDLDAAGQVLDELRRGGLRGKAIIRL
Ga0187809_103393561	3300017937	Freshwater Sediment	WFADRQITAHNHASSANPLISPEGLATVAQMLADGTITARISCTDDLDAAGQVLDELRRGGLRGKAIIRL
Ga0187808_102930621	3300017942	Freshwater Sediment	RLVSTIFAADEGWFAQRQITAHNHASSKNPLISPQGLATVAQMLADGTITARIRSTVELAAAGQVLDELRRGGLRGKAVIRL
Ga0187783_109990141	3300017970	Tropical Peatland	EGWFAQRQITAHNHASSANPLISPHGLAAVAQMLADGTITARIRSAVDLDGAGQVLDELRRGSLRGKAVIRL
Ga0187860_12937011	3300018014	Peatland	VKAYNIASSANSSSSPQGLIEIARMLAEGTITARIRSTVELDDAGRTLETLRNGGLSGKAVIRL
Ga0187863_107251182	3300018034	Peatland	QITARNIAGIANPLATPQGLNEVARMLADGTITARINATVDLNGAAQILEKLRNGGLRGKAVIRL
Ga0187883_102765021	3300018037	Peatland	RSGAGLVSTIYAADEGWFAMRQITAHNIAGNTNPSLSPQGLSEVARMVVDGTITARIRSMVELDGAGQILEKLRKGGLQGKAVIRL
Ga0187883_105320312	3300018037	Peatland	FAADESWFAERHITAHNHASNGNPLISPQGLATVAQMLADSTITARIRSTVELAAAAQVLDDLRRGGLRGKAVIRL
Ga0187859_105520052	3300018047	Peatland	LLSPQGLTEVARMLADGTITARIRSTVTLDGAEQVLDKLRHGGLRGKAVIRL
Ga0181514_13120662	3300019268	Peatland	ASSANPFLSPQGLTEVAGMLADGKITARIRSTVELDGVGQILEKLRQGGLRGKAVIRL
Ga0210407_106062762	3300020579	Soil	DEAWFAERHIKAHNIAPNPNPLESPQGLNQVARMLADGTITARNRSTVELNDAGQMLERLRNGGLSGKAVIRL
Ga0210399_112460092	3300020581	Soil	RHIKAHNIAPNSNPLESPQGLNQVARMLADGTITARNRSTVELNDAGQMLERLRNGGLSGKAVIRL
Ga0210396_102556093	3300021180	Soil	GWFADRHITAHNSASSANPLLSPQGLAQVARMLADGTVTARIGSTTDLNGAGQVLSKLRSGGLRGKAVIRL
Ga0210396_107890702	3300021180	Soil	ADEGWFAQRQITAHNHASSANPLISPQGLVTVAQMLADGTITTRIRSTAGLDAAGQILDELRHGGLRGKAVIRL
Ga0210396_110090332	3300021180	Soil	RKITAHNHSTGANPLISPQGLTTVGQMLADGTITARIGSTVDLDAAGQVLEELRHGRLRGKAIIRL
Ga0210385_110250491	3300021402	Soil	NPLISPEGLSEVARMLAEGTITARVRSTVELDGAGQVLAQLRSGGLRGKAVIRL
Ga0210385_113471952	3300021402	Soil	RHITAHNHASSQNPLISPHGLSEVAHMLAEGTITARVRSTVELDGAGQMLTQLRSGGLHGKVVIRL
Ga0210386_101502211	3300021406	Soil	TLVSTIFAADEGWFADRHITAHNSASSANPLLSPQGLAQVARMLADGTITARIGSTTDLNGAGQVLSKLRSGGLRGKAVIRL
Ga0210391_104120181	3300021433	Soil	STIFAADEGWFAGRQITAINHASSANPLISPEGLTTVAQLLADGTITARIRSAVALDSAGQVLDQLQHGGLRGKALIRL
Ga0210391_104439613	3300021433	Soil	ISPQGLTTVGQMLADGTITARIGSTVDLDAAGQVLEELRHGGLHGKAIIRL
Ga0210390_1001404412	3300021474	Soil	PLLSPQGLAQVARMLADGTVTARIGSTTDLNGAGQVLSKLRSGGLRGKAVIRL
Ga0210390_114642161	3300021474	Soil	GWFAQRKITAHNHASSANPLISPQGLTAVGQMLADGTITARIGSTVDLDAAGQVLEKLRHGGLRGKAIIRL
Ga0210392_100215385	3300021475	Soil	IAPNSNPLESPQGLNQVARMLADGTITARNRSTVELNDAGQMLERLRNGGLSGKAVIRL
Ga0210398_101671111	3300021477	Soil	GRLVSTIFAADEGWFADRRITALNHASSANPLISPEGLTTVAQMLADGTITARIRSTVDLDAAGQVLEQLRRGGLRGKAVIRL
Ga0210398_104612541	3300021477	Soil	WFAERKITAHNISSTNNPLSTPDGLNQVMRMLADGTITARVRSTVGLDGAAQIIEKLRNGGLRGKAVIRL
Ga0224549_10533041	3300022840	Soil	AADETWFADRQITAHNSASSANPLLSPQGLTEVAGMLADGTITARIRSTVELDGAGQILDKLRNGGLRGKAVIRL
Ga0224544_10303092	3300023250	Soil	TNTLSTPQGLNQVARMLADGTITARISATVDLDGAARMLEKLRKGGLRGKAVIRL
Ga0247780_12308711	3300023265	Plant Litter	SSPQGLEQVARMLAAGNISARIVSRVELDSVPQMLEELRRGGLGGKVVIRL
Ga0228598_10045551	3300024227	Rhizosphere	YAANEVWFAERKITAHNISSVTNPLSSPQGLTEVARMLADGTITARIGSTIELDGVGQLLEKLRNGGLRGKAVIRL
Ga0207693_101691802	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	TEIIKSGGSLVSTLYAADERWFADRHITAHNIASNKNPLSSPQGLSDLALMLADGTITARIRSTVELDGVAQLLEKLRHGGLRGKAVIRL
Ga0208237_10437091	3300027080	Forest Soil	DEGWFADRQITAINHASSANPLISPEGLTTVAQLLADGTITARIRSAVALDSAGQVLDQLQHGGLRGKALIRL
Ga0208488_10012575	3300027110	Forest Soil	NHASNANPLISPEGLATVAQMLADGTITARIRSTVDLDAAGQVLEQIRSGGLRGKAVIRL
Ga0208608_1050071	3300027165	Forest Soil	DRQITAHNSASSANPLLSPQGLTEVAGMLADGTITARIRSTVELDSAGQILDKLRNGGLRGKAVIRVAAEK
Ga0209529_10948082	3300027334	Forest Soil	LRARRQRFPLASPQGLNQVARMLAEGTITERIRFTVELGGAGQMLEKLRNGGLRGKAIIRCS
Ga0209525_10937831	3300027575	Forest Soil	ESWFAQRQITAHNHASSANPLISPQGLVTVAQMLADGTITARIRSTAGLDAAGQILDELRHGGLRGKAVIRL
Ga0209118_10658361	3300027674	Forest Soil	GRLVSTLYAADETWFAERHITAHNIASSANPLSSPQGLNEVAHMLADGTITARIRSMVELDGAGQLLEQLRNGGLRGKAVIRL
Ga0209772_102313901	3300027768	Bog Forest Soil	GNANPFSTPQGLTNLARMLAEGTITARIQSTVALDTAGQILEKLRKGGLRGKAVIGM
Ga0209656_105118911	3300027812	Bog Forest Soil	MQLGFVSAIVGDLSLEDVFLFAADEGWFAQRQITAHNHASSANPLISPQGLVTVAQMLADGTITARIRSTAGLDAAGQILDELRHGGLRGKAVIRL
Ga0209773_102565631	3300027829	Bog Forest Soil	VGPNLNPSTSPQGLNQVARMLADGMITARVRTTVGLEGAGQVLEKLRSGGLSGKAVIRL
Ga0209773_104836171	3300027829	Bog Forest Soil	DEKWFAERHITAHNIAGNANPFSTPQGLNNLARMLADGIITARIQSTVALDAAGQILEKLHKGGLRGKAVIRM
Ga0209275_108674112	3300027884	Soil	SSANPLISPEGLTTVAQMLADGTITARIRSTVDLDAAGQVLEQLRRGGLRGKAVIRL
Ga0209380_105277362	3300027889	Soil	ETWFADRQITAHNSASSANPLLSPQGLTEVAGMLADGTITSRIRSTVELDSAGQILDKLRNGGLRGKAVIRVAAEK
Ga0209624_105956491	3300027895	Forest Soil	NPLISPEGLATVAQMLADGTITARIRSTVDLDAAGQVLDQLRGGGLRGKAVIRL
Ga0209624_106237851	3300027895	Forest Soil	ADEGWFAQRQITAHNHASSANPLISPQGLVTVAQMLADGTITARIRSTFGLDAAGQILDELRHGGLRGKAVIRL
Ga0209624_106506412	3300027895	Forest Soil	KWFAERRITAHNISSMTNALSSTKGLSELARMLVDGTITARIGTTVGLDGAGSVLDQLRRGKVQGKAIIRISPPA
Ga0209624_107459921	3300027895	Forest Soil	DEGWFAERRITAHNHASSANPLISPQGLTTVAQMLADGTITARIRSTVDLNAAGQVLEELRHGGLRGKAVIQL
Ga0265357_10161563	3300028023	Rhizosphere	PFSTPQGLTNLARMLADGTITARIQSTVALDAAGQILEKLRKGGLRGKAVIRM
Ga0265349_10096993	3300028037	Soil	EKWFAERHITAHNIAGNANPFSTPQGLTNLARMLADGTITARIQSTVALDAAGQILEKLRKGGLRGKAVIRM
Ga0302233_100887662	3300028746	Palsa	NAAESTPTMTANPVSSPEGLDRIARMLADGTITARITATVTLDGAAQILDRLRTGGLRGKAVIRL
Ga0302234_100405581	3300028773	Palsa	KCEPLISPQGLATVAQMLAEGTITARIGSTVELAAAAQVLADVGRGRLLGKAVIRL
Ga0302222_101910262	3300028798	Palsa	KWFAERKIAAQNLVGNSNPLSSPQGLNEVARMLADGIITARIRSTVELDGVAQVLEKLRNGGLGGKAVIRL
Ga0302229_102696271	3300028879	Palsa	NTSMSPQGLTEVVQMLADGKITARIRSTVALEGAAQIIEKLRSGGLSGKAVIRL
Ga0308309_106656781	3300028906	Soil	VSTRYAADEKWFAERRITAHNISSMTNALSSTKGLSELARMLVDGTITARIGTTVGLDGAGSVLDQLRRGKVQGKAIIRISPPA
Ga0308309_110409291	3300028906	Soil	LVSTIFAADEGWFADRRITALNHASSANPLISPEGLTTVAQMLADGTITARIRSTVDLDAAGQVLEQLRRGGLRGKAVIRL
Ga0308309_115095081	3300028906	Soil	HVTAHNILGSDNPFSSPQGLNEVAQMLARGTITARIRSTVDLEGTAQILEKLRSGGLRGKAVIRL
Ga0311368_103205081	3300029882	Palsa	SSANPLLSPQGLTEVAGMLAEGTITARIRSTVELDGAGQILESLRRGGLRGKAVIRL
Ga0311368_103858532	3300029882	Palsa	ARKITAHNIGGNNNTSMSPQGLGEVVRMLADGKITARIRSTVALEGAAQIIEKLRSGGLSGKAVIRL
Ga0311369_114366041	3300029910	Palsa	NPLISPQGLATVGQMLADGTITTRIGSTVDLDGAGQVLEDLRHGRLHGKAVIRL
Ga0311340_1000570816	3300029943	Palsa	ITAHNHSSKCEPLISPQGLATVAQMLAEGTITARIGSTVELAAAAQVLADVGRGRLLGKAVIRL
Ga0302304_100508552	3300029993	Palsa	EQKIAAHNISSTTNTLSTPQGLNQVARMLAGGTITARINATVDLDGAAQMIEKLRNGGLRGKAVIRL
Ga0302302_13213841	3300029997	Palsa	LISPQGLATVGQMLADGTITTRIGSTVDLDGAGQVLEDLHHGRLHGKAVIRL
Ga0311339_102785642	3300029999	Palsa	FAGRQITAHNSASSANPLLSPQGLTEVAGMLAEGTITARIRSTVELDGAGQILESLRRGGLRGKAVIRL
Ga0311339_108246393	3300029999	Palsa	IFAADEDWFAEHRITAHNHASNENPLISPQGLSTVAQMLADGTITARIHSTVELAAAAQVLDDLHHGRLSGKAVIRL
Ga0311338_103918753	3300030007	Palsa	QNIGGNNNTSMSPQGLGEVVRMLADGKITARIRSTVALEGAAQIIEKLRSGGLSGKAVIR
Ga0311344_112369872	3300030020	Bog	ERKLIAHNIAGNANPFSTPDGLARIANMLADGTITARVQSAVALDCTAQIIEKLRTGGLRGKAVIRL
Ga0302177_100040421	3300030053	Palsa	SKCEPLISPQGLATVAQMLAEGTITARIGSTVELAAAAQVLADVGRGRLLGKAVIRL
Ga0311353_100323331	3300030399	Palsa	PLISPQGLATVAQMLAEGTITARIGSTVELAAAAQVLADVGRCRLLGKAVIRL
Ga0302184_100608491	3300030490	Palsa	FAERKIAAQNLVGNSNPLSSPQGLNEVARMLADGIITARIRSTVELDGVAQVLEKLRNGGLGGKAVIRL
Ga0302184_100889651	3300030490	Palsa	GGRLVSTIFAADEGWFALRQITAHNHSSRGNPLISPQGLATVGQMLADGTITTRIGSTVDLDGAGQVLEDLHHGRLHGKAVIRL
Ga0310037_101451462	3300030494	Peatlands Soil	AADEGWFAQRQITAHNHASSANPLISPQGLTTVAQMLADGTITARIRSTVDLDAAGQVLEQLRRGGLRGKAVIRL
Ga0311370_118175932	3300030503	Palsa	SASSPNPLLSPPGLTEVARMLADGTITARIRSTVNLDGVGQILEKLRQGGLRGKAVIRL
Ga0302183_100590462	3300030509	Palsa	HSSKCEPLISPQGLATVAQMLAEGTITARIGSTVELAAAAQVLADVGRGRLLGKAVIRL
Ga0311357_101124091	3300030524	Palsa	FGGTPNPKQSPHGLTEVAQMLAAGTITARIGSAVGLDAVPGGLEKLRDGDLHGKAVIRLQ
Ga0311357_113630011	3300030524	Palsa	RQIAAHNIVSSASPVSSPEGLAEIARMLEAGAISARIRSRVGLDGAGQVLEKLRTGGLHGKAVIRLQA
Ga0311357_113941422	3300030524	Palsa	AQPRSNVNPLISPQGLATVAQMLADGTITARIRSTVGLGAAAQVLDDLSRGGLCGKAVIR
Ga0311355_103395862	3300030580	Palsa	ANPVSSPEGLDRIARMLADGTITARITATVTLDGAAQILDRLRTGGLRGKAVIRL
Ga0311355_116730641	3300030580	Palsa	TIVAADEKWFAGRQITAHNSASTANPLLSPQGLTEVARMLADGTITARIRSTVTLDGAEQVLDKLRHGGLRGKAVIRL
Ga0310039_103386111	3300030706	Peatlands Soil	HRQITAHNIASSTNPLSSPRGLSEVAHMLADGTITARIRSTVELDGAGQMLEKLRNGGLRGKAVIKAPARWVPT
Ga0265460_118361892	3300030740	Soil	EGWFAERQITAYNHSSSRNPLISPEGLTEVAQMLADGTITARIGSAVDLDAAGQVLEQLRHGGLRGKAIIRL
Ga0265459_135328501	3300030741	Soil	IFAADEGWFAERQITAYNHSSSRNPLISPEGLTEVAQMLADGTITARIGSAVDLDAAGQVLEHLRHGGLRGKAIIRL
Ga0265770_10905611	3300030878	Soil	TIQAADEKWFAERHITAHNIAGNANPFSTPQGLTNLARMLADGTITARIQSTVALDAAGQILEKLRKGGLRGKAVIRM
Ga0265760_102227872	3300031090	Soil	AHNIVLNATPSSSPQGLSEVARMLAAGTITARIRSTVELNGAGQMLEKLRSGGLRGKAIIRI
Ga0302325_100167131	3300031234	Palsa	PLISPQGLATVAQMLAEGTITARIGSTVELAAAAQVLADVGRGRLLGKAVIRL
Ga0302325_116081761	3300031234	Palsa	VNPLISPQGLATVAQMLADGTITARIRSTVGLGAAAQVLDDLSRGGLCGKAVIRL
Ga0302325_119673532	3300031234	Palsa	RQITAYNSASSANPLLSPQGLTEVAQLLAAGTITARVRATADLDGAGQILDKLRDGGLRGKAVIRLPDRQGAA
Ga0302324_1009436991	3300031236	Palsa	IFAADEGWFADRQITARNSASSANPLLSPPGLTEVAGMLADGAITARIRSTADLDGAGQILERLREGGLRGKAVIRL
Ga0302326_113343301	3300031525	Palsa	NTSMSPQGLGEVVRMLADGKITARIRSTVALEGAAQIIEKLRSGGLSGKAVIRL
Ga0302326_123131201	3300031525	Palsa	STTNTLSTPQGLNQVARMLADGTITARINATVDLNGAAQILEKLRNGGLRGKAVVRL
Ga0310915_110442612	3300031573	Soil	TVHAANEGWFAERQITAHNISPGANPSLTPEGLREIARMLADGTITARIRATVDLDGAGQILDSLRKSGLRGKAVIRL
Ga0310686_1162455723	3300031708	Soil	AGNANPFSTPQGLTNLARMLADGTITARIQSTVALDAAGQILEKLRKGGLRGKAVIRM
Ga0310686_1196094321	3300031708	Soil	VWFAERKITAHNISSVTNPLSSPQGLTEVARMLADGTITARIGSTIELDGVGQLLEKLRNGGLRGKAVIRL
Ga0310686_1196354431	3300031708	Soil	VWFAERKITAHNISSVTNPLSSPQGLTEVARMLADGTITARIGSTVELDGVGQLLEKLRNGGLRGKAVIRL
Ga0306918_107117882	3300031744	Soil	DAIRRDAEILKRAGRLVSTVHAANEGWFAERQITAHNISPGANPSLTPEGLREIARMLADGTITARIRATVDLDGAGQILDSLHKSGLRGKAVIRL
Ga0307475_102488371	3300031754	Hardwood Forest Soil	SSSPQGLGEVARMAAEGTITVRIGSTVELEGAGQMLEKLRSGGLHGKAVIRI
Ga0307475_113596961	3300031754	Hardwood Forest Soil	ASISNPLSSPQGLKEVARMLADGTITARIRSTVELEAAGQMLDKLRHGALRGKGVIRL
Ga0335072_111083761	3300032898	Soil	MRAFAVRSFGEPPSVHEGWFAERQITAHNHASSANPQISPQGLVTVAQMLADGTITARIRSTADLDAAGQVLDELRHGRLRGKAVIRL
Ga0370515_0129195_873_1085	3300034163	Untreated Peat Soil	WFAARQITAHNSASSANPFLSPQGLTEVAGLLADRTITARIRSTVELDGVGQILEKLRQGGLRGKAVIRL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055940

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences