Metagenome Family F055990

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055990
Family Type	Metagenome
Number of Sequences	138
Average Sequence Length	80 residues
Representative Sequence	RPAPTTTSSRRRTITTPRLLPHTIQLCIHCRHNPAGFWVSRNSGQTVRRPWCLSCCQDLDPGCYHVNPFDS
Number of Associated Samples	104
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	39.42 %
% of genes near scaffold ends (potentially truncated)	68.84 %
% of genes from short scaffolds (< 2000 bps)	89.86 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.696 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.087 % of family members)
Environment Ontology (ENVO)	Unclassified (31.159 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.203 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.07% β-sheet: 16.16% Coil/Unstructured: 76.77%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00582	Usp	15.94
PF00106	adh_short	8.70
PF13377	Peripla_BP_3	5.07
PF04542	Sigma70_r2	2.90
PF01381	HTH_3	2.17
PF01522	Polysacc_deac_1	1.45
PF13560	HTH_31	1.45
PF02329	HDC	1.45
PF00730	HhH-GPD	0.72
PF00196	GerE	0.72
PF13561	adh_short_C2	0.72
PF01668	SmpB	0.72
PF13602	ADH_zinc_N_2	0.72
PF02457	DAC	0.72
PF03992	ABM	0.72
PF01149	Fapy_DNA_glyco	0.72
PF00248	Aldo_ket_red	0.72
PF12645	HTH_16	0.72
PF13424	TPR_12	0.72
PF10635	DisA-linker	0.72
PF07730	HisKA_3	0.72
PF01810	LysE	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	2.90
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.90
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.90
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.90
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	1.45
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.72
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.72
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	0.72
COG0691	tmRNA-binding protein	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.72
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.72
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.72
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.72
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.72
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.72
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.70 %
All Organisms	root	All Organisms	41.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.70 %
cellular organisms	root	All Organisms → cellular organisms	41.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.70 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.30 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	31.88 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.70 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	30.43 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.45 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	28.26 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.72 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.72 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.70 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	5.80 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.17 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	2.17 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.45 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.72 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.70 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	5.80 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	2.17 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.90 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.45 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.45 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.72 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.72 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.70 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	5.80 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	2.17 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.45 %
Streptosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium	0.72 %
unclassified Burkholderia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia	0.72 %
Planotetraspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora	0.72 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.72 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.70 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	5.80 %
Kribbella qitaiheensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella qitaiheensis	2.17 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.45 %
Burkholderia sp. AU4i	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. AU4i	0.72 %
Planotetraspora thailandica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora thailandica	0.72 %
Streptosporangium canum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium canum	0.72 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.72 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005329\|Ga0070683_101221174	Not Available	722	Open in IMG/M
3300005332\|Ga0066388_100337771	Not Available	2152	Open in IMG/M
3300005332\|Ga0066388_100399661	All Organisms → cellular organisms → Bacteria	2019	Open in IMG/M
3300005338\|Ga0068868_100275705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1422	Open in IMG/M
3300005343\|Ga0070687_100854856	Not Available	649	Open in IMG/M
3300005344\|Ga0070661_101382291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	592	Open in IMG/M
3300005354\|Ga0070675_100475593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1123	Open in IMG/M
3300005434\|Ga0070709_10064740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2338	Open in IMG/M
3300005434\|Ga0070709_10206226	Not Available	1395	Open in IMG/M
3300005434\|Ga0070709_10517482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	909	Open in IMG/M
3300005435\|Ga0070714_100005957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	9361	Open in IMG/M
3300005435\|Ga0070714_100105825	All Organisms → cellular organisms → Bacteria	2484	Open in IMG/M
3300005436\|Ga0070713_100314664	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300005436\|Ga0070713_100874942	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300005437\|Ga0070710_10180709	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300005439\|Ga0070711_100991314	Not Available	720	Open in IMG/M
3300005439\|Ga0070711_101627822	Not Available	565	Open in IMG/M
3300005439\|Ga0070711_101846784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → unclassified Burkholderia → Burkholderia sp. AU4i	530	Open in IMG/M
3300005458\|Ga0070681_10891562	Not Available	808	Open in IMG/M
3300005468\|Ga0070707_101681498	Not Available	602	Open in IMG/M
3300005537\|Ga0070730_10069843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2481	Open in IMG/M
3300005546\|Ga0070696_100565952	Not Available	912	Open in IMG/M
3300005564\|Ga0070664_100512083	All Organisms → cellular organisms → Bacteria → Proteobacteria	1107	Open in IMG/M
3300005564\|Ga0070664_101575587	Not Available	622	Open in IMG/M
3300005577\|Ga0068857_102151279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	548	Open in IMG/M
3300005617\|Ga0068859_102539694	Not Available	564	Open in IMG/M
3300005764\|Ga0066903_100204333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2962	Open in IMG/M
3300005843\|Ga0068860_100347238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1460	Open in IMG/M
3300006028\|Ga0070717_11111434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
3300006028\|Ga0070717_11129038	Not Available	714	Open in IMG/M
3300006173\|Ga0070716_100606982	All Organisms → cellular organisms → Bacteria	824	Open in IMG/M
3300006175\|Ga0070712_100044135	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella qitaiheensis	3073	Open in IMG/M
3300006175\|Ga0070712_100722543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	851	Open in IMG/M
3300006175\|Ga0070712_101051654	Not Available	705	Open in IMG/M
3300006175\|Ga0070712_101628289	Not Available	565	Open in IMG/M
3300006358\|Ga0068871_100635911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	973	Open in IMG/M
3300006804\|Ga0079221_11202431	Not Available	589	Open in IMG/M
3300006914\|Ga0075436_101454228	Not Available	520	Open in IMG/M
3300009148\|Ga0105243_12434772	Not Available	562	Open in IMG/M
3300009176\|Ga0105242_12014297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	620	Open in IMG/M
3300009177\|Ga0105248_11997783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	659	Open in IMG/M
3300009551\|Ga0105238_11943678	Not Available	621	Open in IMG/M
3300009792\|Ga0126374_11744047	Not Available	519	Open in IMG/M
3300010043\|Ga0126380_10064937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2042	Open in IMG/M
3300010359\|Ga0126376_10169098	All Organisms → cellular organisms → Bacteria	1775	Open in IMG/M
3300010373\|Ga0134128_10461392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1417	Open in IMG/M
3300010373\|Ga0134128_10487479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1375	Open in IMG/M
3300010376\|Ga0126381_103432494	Not Available	623	Open in IMG/M
3300010396\|Ga0134126_10214481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella qitaiheensis	2295	Open in IMG/M
3300010396\|Ga0134126_10250694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium canum	2094	Open in IMG/M
3300010396\|Ga0134126_10691980	Not Available	1159	Open in IMG/M
3300010397\|Ga0134124_10622681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1060	Open in IMG/M
3300010397\|Ga0134124_12528630	Not Available	556	Open in IMG/M
3300010401\|Ga0134121_12289550	Not Available	579	Open in IMG/M
3300012201\|Ga0137365_10919657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	637	Open in IMG/M
3300012285\|Ga0137370_10904955	Not Available	546	Open in IMG/M
3300012356\|Ga0137371_11392644	Not Available	515	Open in IMG/M
3300012915\|Ga0157302_10063780	Not Available	1076	Open in IMG/M
3300012960\|Ga0164301_11338683	Not Available	582	Open in IMG/M
3300012971\|Ga0126369_10209200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1888	Open in IMG/M
3300012988\|Ga0164306_11082616	Not Available	665	Open in IMG/M
3300012989\|Ga0164305_10754314	Not Available	802	Open in IMG/M
3300013105\|Ga0157369_10904811	Not Available	905	Open in IMG/M
3300013308\|Ga0157375_12064041	Not Available	678	Open in IMG/M
3300014745\|Ga0157377_11332895	Not Available	563	Open in IMG/M
3300015372\|Ga0132256_100824098	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1044	Open in IMG/M
3300016294\|Ga0182041_12188549	Not Available	517	Open in IMG/M
3300016404\|Ga0182037_11925914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	530	Open in IMG/M
3300017821\|Ga0187812_1031796	Not Available	1804	Open in IMG/M
3300017821\|Ga0187812_1139204	Not Available	784	Open in IMG/M
3300017995\|Ga0187816_10055198	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1666	Open in IMG/M
3300018032\|Ga0187788_10308155	Not Available	644	Open in IMG/M
3300020581\|Ga0210399_11294685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	574	Open in IMG/M
3300021088\|Ga0210404_10625246	Not Available	613	Open in IMG/M
3300024232\|Ga0247664_1106172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	652	Open in IMG/M
3300024325\|Ga0247678_1094224	Not Available	508	Open in IMG/M
3300025898\|Ga0207692_10131705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1413	Open in IMG/M
3300025898\|Ga0207692_10339172	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	924	Open in IMG/M
3300025898\|Ga0207692_10396767	Not Available	859	Open in IMG/M
3300025906\|Ga0207699_10221661	Not Available	1291	Open in IMG/M
3300025915\|Ga0207693_10049607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella → Kribbella qitaiheensis	3296	Open in IMG/M
3300025915\|Ga0207693_10564104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	887	Open in IMG/M
3300025915\|Ga0207693_11043464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	623	Open in IMG/M
3300025915\|Ga0207693_11264200	Not Available	554	Open in IMG/M
3300025916\|Ga0207663_10119742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1800	Open in IMG/M
3300025916\|Ga0207663_10306005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1189	Open in IMG/M
3300025916\|Ga0207663_10710730	Not Available	796	Open in IMG/M
3300025918\|Ga0207662_10318883	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300025927\|Ga0207687_11361118	Not Available	610	Open in IMG/M
3300025929\|Ga0207664_10189358	All Organisms → cellular organisms → Bacteria	1770	Open in IMG/M
3300025939\|Ga0207665_10426394	Not Available	1014	Open in IMG/M
3300026116\|Ga0207674_11824088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	575	Open in IMG/M
3300028138\|Ga0247684_1064276	Not Available	599	Open in IMG/M
3300028281\|Ga0247689_1003033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1937	Open in IMG/M
3300028381\|Ga0268264_10135544	All Organisms → cellular organisms → Bacteria	2188	Open in IMG/M
3300028807\|Ga0307305_10124699	Not Available	1190	Open in IMG/M
3300028807\|Ga0307305_10413008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Planotetraspora → Planotetraspora thailandica	609	Open in IMG/M
3300031543\|Ga0318516_10435006	Not Available	755	Open in IMG/M
3300031544\|Ga0318534_10205277	Not Available	1137	Open in IMG/M
3300031545\|Ga0318541_10673601	Not Available	578	Open in IMG/M
3300031546\|Ga0318538_10164953	Not Available	1175	Open in IMG/M
3300031546\|Ga0318538_10234754	Not Available	983	Open in IMG/M
3300031573\|Ga0310915_10279955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1177	Open in IMG/M
3300031640\|Ga0318555_10779618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	516	Open in IMG/M
3300031679\|Ga0318561_10183402	Not Available	1132	Open in IMG/M
3300031679\|Ga0318561_10443325	Not Available	714	Open in IMG/M
3300031680\|Ga0318574_10379273	Not Available	825	Open in IMG/M
3300031682\|Ga0318560_10233690	Not Available	986	Open in IMG/M
3300031719\|Ga0306917_10542025	Not Available	914	Open in IMG/M
3300031720\|Ga0307469_11037293	Not Available	768	Open in IMG/M
3300031723\|Ga0318493_10194049	Not Available	1069	Open in IMG/M
3300031736\|Ga0318501_10218152	Not Available	1002	Open in IMG/M
3300031751\|Ga0318494_10219884	Not Available	1085	Open in IMG/M
3300031770\|Ga0318521_10883570	Not Available	546	Open in IMG/M
3300031778\|Ga0318498_10094804	Not Available	1351	Open in IMG/M
3300031793\|Ga0318548_10338397	Not Available	739	Open in IMG/M
3300031793\|Ga0318548_10505593	Not Available	590	Open in IMG/M
3300031795\|Ga0318557_10087391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1366	Open in IMG/M
3300031795\|Ga0318557_10175316	Not Available	975	Open in IMG/M
3300031796\|Ga0318576_10574110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300031821\|Ga0318567_10167486	Not Available	1219	Open in IMG/M
3300031821\|Ga0318567_10314275	Not Available	884	Open in IMG/M
3300031821\|Ga0318567_10597777	Not Available	626	Open in IMG/M
3300031879\|Ga0306919_10222600	Not Available	1411	Open in IMG/M
3300031879\|Ga0306919_11275758	Not Available	557	Open in IMG/M
3300031890\|Ga0306925_11724329	Not Available	603	Open in IMG/M
3300031894\|Ga0318522_10418013	Not Available	508	Open in IMG/M
3300031897\|Ga0318520_10906043	Not Available	555	Open in IMG/M
3300031981\|Ga0318531_10523579	Not Available	537	Open in IMG/M
3300032052\|Ga0318506_10469979	Not Available	557	Open in IMG/M
3300032067\|Ga0318524_10615264	Not Available	572	Open in IMG/M
3300032076\|Ga0306924_10420831	Not Available	1528	Open in IMG/M
3300032261\|Ga0306920_101200756	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1096	Open in IMG/M
3300032261\|Ga0306920_101949412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	824	Open in IMG/M
3300032892\|Ga0335081_10359716	Not Available	1892	Open in IMG/M
3300032892\|Ga0335081_12611812	Not Available	518	Open in IMG/M
3300033134\|Ga0335073_11901284	Not Available	550	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.78%
Host-Associated	Host-Associated	15.22%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	82.61%
Plants	Host-Associated → Plants	15.22%
Aquatic	Environmental → Aquatic	2.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.14%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.35%
Freshwater	Environmental → Aquatic → Freshwater	2.17%
Roots	Host-Associated → Plants → Roots	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.72%
Loam	Environmental → Terrestrial → Soil → Loam	28.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.35%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.62%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.17%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	26.81%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.90%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.09%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	21.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.52%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.35%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.62%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.17%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.17%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.17%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.17%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.45%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.45%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300024325	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK19	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028138	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK25	Environmental	Open in IMG/M
3300028281	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK30	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070683_1012211742	3300005329	Corn Rhizosphere	MNLTLLRQILVRRPGTATANRRRRTMTAPRRLPRTIQLCIHCRNNPAGFWVSRSSGQTVRRPWCLSCCQNLDRAGYHVQPFPS*
Ga0066388_1003377713	3300005332	Tropical Forest Soil	VAAGQNRPALTANPRRPSHTTPFPRPHTIQLCIHCQHNPAGWVSHTSGQTVRRPWCLSCCQNLDPACYHLTPFES*
Ga0066388_1003996613	3300005332	Tropical Forest Soil	MNLTLRQILARRPSPAGAPRRLPRTIHRLPRTIQLCIHCRHNPAGFWVSRNSSQTVRRPWCLSCCQNLDPGRYHVQPFAS*
Ga0068868_1002757051	3300005338	Miscanthus Rhizosphere	ILVRRPGTATANRRRRTMTAPRRLPRTIQLCIHCRNNPAGFWVSRSSGQTVRRPWCLSCCQNLDRAGYHVQPFPS*
Ga0070687_1008548561	3300005343	Switchgrass Rhizosphere	MNLTLLRQILVRRPGTATANRRRRTMTAPRRLPRTIQLCIHCRDNPAGFWVSRSSGQTVRRPWCLSCCQNLDRAGYHVQPFPS*
Ga0070661_1013822912	3300005344	Corn Rhizosphere	LRQILVRRPGTATANRRRRTMTAPRRLPRTIQLCIHCRNNPAGFWVSRSSGQTVRRPWCLSCCQNLDRAGYHVQPFPS*
Ga0070675_1004755931	3300005354	Miscanthus Rhizosphere	LLRQILVRRPGTATANRRRRTMTAPRRLPRTIQLCIHCRNNPAGFWVSRSSGQTVRRPWCLSCCQNLDRAGYHVQPFPS*
Ga0070709_100647404	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MSRIPRAGQHRPAATTTNSRRRAITKPRLLPHTIQLCIHCRQNPAGFWVSRNRSQTVRRPWCLSCCQALDPGRYHVRPFDS*
Ga0070709_102062261	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RPAPTTTNSRQRRITALRLLPHTIQLCIHCRQNPAGFWVSRDSGQTARRPWCLSCCQDLDPGRYLAKPFDS*
Ga0070709_105174821	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MNLTPLRQILARRPSPPAAGQPQPGPRPRTMTAPRRLPRTIQLCIHCRHNPAGFWVSRNSSQTVRRPWCLSCCQNLDPGRYHVQPFDS*
Ga0070714_10000595710	3300005435	Agricultural Soil	AAGSVAADRNKPAPTTKTRRRTITTARLLPHTIQVCIHCRQNPAGFWVSPTSGQTVRRPWCLSCCQDLDPGRYLAKPFDS*
Ga0070714_1001058253	3300005435	Agricultural Soil	MNLTPLRQILARRPSPPAAGQPQPGPRPRTMTAPRRLPRTIQLCIHCRHNPAGFWVSRSSSQTVRRPWCLSCCQNLDPGRYHVQPFDS*
Ga0070713_1003146643	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MNPTLRQILGRRPSARGAGQPQPGQLSSYRPPRRLPHTIQLCIHCQHNPAGFWVSRTGDQTVRRPWCLSCCQGLDPGGYHV
Ga0070713_1008749422	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MNLTLLRQILARRPGTATANRRRRTRTAPWRRPHTIQLCIHCRHNPAGFWVSRNSSQTARRPWCLSCCQNLDPGPYHVQPFGS*
Ga0070710_101807091	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSRIPRAGQHRPAATTTNSRRRAITKPRLLPHTIQLCIHCRQNPAGFWVSRNRSQTVRRPWCLSCCQALDPGRYHVRPF
Ga0070711_1009913142	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNLTLLRQILARRPGTATANRRRRTRTAPWRRPHTIQLCIHCRHNPAGFWVSRNSSQTVRRPWCLSCCQNLDPGPYHVQPFGS*
Ga0070711_1016278222	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MSRIPRAGQHRPAATTTNSRRRAITKPRLLPHTIQLCIHCRQNPAGFWVSRNRSQTVRRPWCLSCCQALDPGRYHVR
Ga0070711_1018467841	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNLTPLRQILARRPSPPAGGQPQPGPRPRTMTAPRRLPRTIQLCIHCRHNPAGFWVSRSSSQTVRRPWCLSCCQNLDPGRYHVQPFDS*
Ga0070681_108915622	3300005458	Corn Rhizosphere	ILVRRPGTATANRRRRTMTAPRRLPRTIQLCIHCRNNPAGFWVSHSSGQTVRRPWCLSCCQNLDRAGYHVQPFPS*
Ga0070707_1016814981	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MNLTLLRQILVRRPGTATANRRRRTMTAPRRLPRTIQLCIHCRNNPAGFWVSRSSGQTVRRPWCLSCCQ
Ga0070730_100698433	3300005537	Surface Soil	VIRIRPARRPWVGQNRPAPTTAKSRLRALTVSGLRPHTIHLCSHCRHNPAGFWVNRTSDQTARRPWCLSCCQDLDPACHHIRPFDLQYLQ*
Ga0070696_1005659523	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	RSAPAATASRRRTITVSGLLPRTIQLCIHCQRNPAGFWVSRDSGQTVRRPWCLSCCQNLDPGCCHVQPFDS*
Ga0070664_1005120832	3300005564	Corn Rhizosphere	MNLTLLPQILVRRPGTATANRRRRTMTAPRRLPRTIQLCIHCRNNPAGFWVSRSSGQTVRRPWCLSCCQNLDRAGYHVQPFPS*
Ga0070664_1015755872	3300005564	Corn Rhizosphere	EDLAAGASVAAGQDRPAPTITSSRSRTRTTPRLVPHTIQLCIHCRHNPAGFWVSYASGQTVRRPWCLSCCQDLDPRCHHIKPFDS*
Ga0068857_1021512791	3300005577	Corn Rhizosphere	GTATANRRRRTMTAPRRLPRTIQLCIHCRNNPAGFWVSRSSGQTVRRPWCLSCCQNLDRAGYHVQPFPS*
Ga0068859_1025396941	3300005617	Switchgrass Rhizosphere	KAVMNLTLLRQILVRRPGTATANRRRRTMTAPRRLPRTIQLCIHCRNNPAGFWVSRSSGQTVRRPWCLSCCQDLDPRCHHIKPFDS*
Ga0066903_1002043332	3300005764	Tropical Forest Soil	MNLTPLRQILARRPSPPGAGQPQPGQPQPGQLSSHRLPAGRGRLHTIQLCIHCRHNPAGFWVSRNSSQTVRRPWCLSCCQSLDPGCYHVRPFES*
Ga0068860_1003472383	3300005843	Switchgrass Rhizosphere	LLRQILVRRHGTATANRRRRTMTAPRRLPRTIQLCIHCRNNPAGFWVSRSSGQTVRRPWCLSCCQNLDRAGYHVQPFPS*
Ga0070717_111114342	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	ATANSARRTMTVPCLLPRTIQLCIHCGHNPAGFWVSRNSGQTVRRPWCLSCCQNLDQRCYRVQPFDG*
Ga0070717_111290381	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MNLTLLRQILARRPGTATANRRRRTRTAPWRRPHTIQLCIHCRHNPAGFWVSRNSSQTARRPWCLSCCQNLDPG
Ga0070716_1006069822	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MNLTLLRQILARRPSAPGAGQPQAGQLSSRRRTMSAPRRLPHTIQQCIHCRHNPAGFWVSRNSSQTVRRPWCLSCCQNLDPGRYHVQPFDS*
Ga0070712_1000441351	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AGSVAADRNKPAPTTKTRRSTITTARLLPHTIQVCIHCRQNPAGFWVSPTSGQTVRRPWCLSCCQDLDPGRYLAKPFDS*
Ga0070712_1007225431	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	KAVMNLTLLRQILARRPSAPGAGQPQAGQLSSRRRTMSAPRRLPHTIQQCIHCRHNPAGFWVSRNSSQTVRRPWCLSCCQNLDPGRYHVQPFDN*
Ga0070712_1010516542	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MNLTPLRQILARRPSPPGAGHRRRRTMTARPRLPRTIQLCIHCRHNPAGFWVSRNSSQTVRRPWCLSCCQNLDPGRYHAQPFGS*
Ga0070712_1016282891	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	RPAPTTTNSRRRTIPTPRLLPHTIQLCVHCQHDPAGFWVSRDGDRTVCRPWCLSCCQDLDPACHHIKPFDLQYLR*
Ga0068871_1006359111	3300006358	Miscanthus Rhizosphere	ASVAAGQDRPAPTITSSRSRTRTTPRLVPHTIQLCIQCRHNPAGFWVSYASGQTVRRPWCLSCCQDLDPRCHHIKPFDS*
Ga0079221_112024312	3300006804	Agricultural Soil	ASRPGRDGQNRPAPAATASRRRTITVSGLLPRTIQLCIHCQRNPAGFWVSRDSGQTVRRPWCLSCCQNLDPGYCHVQPFDS*
Ga0075436_1014542281	3300006914	Populus Rhizosphere	QDLSAAASVAAGHNRPAPTTTNSRQRRITALRLLPHTIQLCIHCRQNPAGFWVSRDSGQTARRPWCLSCCQDLDAGRYHVTPFDS*
Ga0105243_124347722	3300009148	Miscanthus Rhizosphere	MNLTLLRQILVRRPGTATANRRRRTMTAPRRLPRTIQLCIHCRNNPAGFWVSRSSGQTVRRPWCLSCCQDLDPRCHHIKPFDS*
Ga0105242_120142971	3300009176	Miscanthus Rhizosphere	MNLTLLRQILVRRPGTATANRRRRTMTAPRRLPRTIQLCIHCRNNPAGFWVSRSSGQTVRRPWCLSCCQNLDRAGYHVQPFP
Ga0105248_119977831	3300009177	Switchgrass Rhizosphere	VMNLTLLRQILVRRPGTATANRRRRTMTAPRRLPRTIQLCIHCRNNPAGFWVSRSSGQTVRRPWCLSCCQNLDRAGYHVQPFPS*
Ga0105238_119436781	3300009551	Corn Rhizosphere	TARFVQDLAAGAGVTAGRPGPASTITNPRLRTITMPRLLPHTIQLCIHCRQNPAGFWVSHNGGQTVRRPWCLSCCQDLDPGWYHIKPFDS*
Ga0126374_117440471	3300009792	Tropical Forest Soil	DQDLAAAASVVAGQNKPARTTTNSWRRTMTMPRLLPRTVQLCIHCRQFPAGFWVSRNGDQTVRRPWCLSCCQHLDPGWYHVASFES*
Ga0126380_100649371	3300010043	Tropical Forest Soil	MPDENGIPPSRRNVDQDLAAAASVVAGQNKPARTTTNSWRRTMTMPRLLPRTVQLCIHCRQFPAGFWVSRNGDQTVRRPWCLSCCQHLDPGWYHVASFES*
Ga0126376_101690983	3300010359	Tropical Forest Soil	MNLTLRQILARRPSARTMSAPRRLPRTIQLCIHCRHNPAGFWVSRSSSQTVRRPWCLSCCQNLDPGRYHVQPFAS*
Ga0134128_104613921	3300010373	Terrestrial Soil	VAADRNKPAPTTKTRRRTITTARLLPHTIQVCIHRRQNPAGFWVSPTSGQTVRRPWCLSCCQDLDPGRYLAKPFDS*
Ga0134128_104874793	3300010373	Terrestrial Soil	GQDKPAPTITNSQRRTITTHRLLLHSIQLCIHCRQNPAGFWVSRDNSQVVRRPWCLSCCQHLDPARHRVQPFDS*
Ga0126381_1034324942	3300010376	Tropical Forest Soil	VAAGQHWPAPATANSRRRTITMPRLLPHTIQLCIHCRHNPAGFWASHTGDQTVRRPWCLSCCQQLDPGHHRLIPFDG*
Ga0134126_102144813	3300010396	Terrestrial Soil	VAADRNKPAPTTKTRRRTITTARLLPHTIQVCIHCRQNPAGFWVSPTSGQTVRRPWCLSCCQDLDPGRYLAKPFDS*
Ga0134126_102506941	3300010396	Terrestrial Soil	MAAGQNRPAPATANRRRRTTTTARPLPHTIQLCIHCRRNPAGFWVSRNGSQTVRRPWCLSCCQDLDPDANRIKPFDD*
Ga0134126_106919801	3300010396	Terrestrial Soil	VAAAATVAAGQNRPGTATANGWRRTMTAPRRLPHTIQLCIHCRHNPAGFWVSRNSSQTVRRPWCLSCCQNLDPGRYHVQPFDS*
Ga0134124_106226811	3300010397	Terrestrial Soil	PGTATANRRRRTMTAPRRLPRTIQLCIHCRNNPAGFWVSRSSGQTVRRPWCLSCCQNLDRAGYHVQPFPS*
Ga0134124_125286301	3300010397	Terrestrial Soil	TVAAGQNRPGTTTANLRRRTITAPRRLPHTIQLCIHCRHNPAGFWVSRNSSQTVRRPWCLSCCQNLDPGRYHVQPFDN*
Ga0134121_122895501	3300010401	Terrestrial Soil	VVAATVAAGQNRPGTTTANRRRRTITAPRRLPHTIQLCIHCRHNPAGFWVSRNSSQTVCRPWCLCCCQNLDPGCYHVQPFDS*
Ga0137365_109196571	3300012201	Vadose Zone Soil	RPAPTTTSSRRRTITTPRLLPHTIQLCIHCRHNPAGFWVSRNSGQTVRRPWCLSCCQDLDPGCYHVNPFDS*
Ga0137370_109049551	3300012285	Vadose Zone Soil	TPTTTGSGQRTTTMPRLLPHTIQLCVHCRHNPAGFWVSRNGGRTARRPWCLSCCQDLDPGCYHVNPFDS*
Ga0137371_113926441	3300012356	Vadose Zone Soil	GASRAVGKNRPAPTTTSSRRRTITTPRLLPHTIQLCIHCRHNPAGFWVSRNSGQTVRRPWCLSCCQDLDPGCYHVNPFDS*
Ga0157302_100637802	3300012915	Soil	MSRIPRAGQHRPAATTTNSRRRAITKPRLLPHTIQLCIHCRQNPAGFWVSRNRSQTVRRPWCLSCCDDLDRERCDMIPFGR*
Ga0164301_113386831	3300012960	Soil	MNLTLLRQILVRRPGTATANRRRRTMTAPRRLPRTIQLCIHCRNNPAGFWVSRSSGQTVRRPWCLSCCQNLDPGRYHVQPFDS*
Ga0126369_102092003	3300012971	Tropical Forest Soil	RPSPPGAGQPQPGQFSGHRLPAGRRRLHTIQLCIHCRHNPAGFWVSRNGSQTVRRPWCLSCCQSLDPGCYHVRPFES*
Ga0164306_110826161	3300012988	Soil	MAHRIWAKAVMNLTLLRQILARRPSPPGAGQPQAGQLSSRRRTMSAPRRLPHTTQQCIHCRHNPAGFWVSRNSSQTVRRPWCLSCCQNLDPGRYHVQP
Ga0164305_107543141	3300012989	Soil	PGRDGLAGRFTQDLASAASVAAGQCRSAPAATASRRRTITVSGLLPRTIQLCIRCRRNPAGFWVSRDSGQTTRRPWCLSCCQDLDPRRYHVQPFDS*
Ga0157369_109048111	3300013105	Corn Rhizosphere	MNLTLLRQILVRRPGTATANRRRRTTTTARPLPHTIQLCIHCRRNPAGFWVSRNGSQTVRRPWCLSCCQDLDPDGNRIK
Ga0157375_120640411	3300013308	Miscanthus Rhizosphere	APAATASRRRTITVSGLLPRTIQLCIHCQRNPAGFWVSRDSGQTVRRPWCLSCCQNLDPGCCHVQPFDS*
Ga0157377_113328952	3300014745	Miscanthus Rhizosphere	MNLTLLLQILVRRPGTATANRRRRTMTAPRRLPRTIQLCIHCRNNPAGFWVSRSSGQTVRRPWCLSCCQNLDRAGYHVQPFPS*
Ga0132256_1008240982	3300015372	Arabidopsis Rhizosphere	ATASRRRTITVSGLLPRTIQLCIHCQRNPAGFWVSRDSGQTVRRPWCLSCCQNLDPGCCHVQPFDS*
Ga0182041_121885492	3300016294	Soil	DPAAAAPVGAGQNWPAPATAIPRRRTIAMPRLLPHTIQLCIHCQRNPAGFWVSRTSGQTARRPWCLSCCHDLDPPCYHIKPFDS
Ga0182037_119259142	3300016404	Soil	NTRQRTMAAPRLLPHTIQLCIHCQQNPAGFGVSRTSDQTVRRPWCLSCCQDLDPARHHIRPFDLQYLR
Ga0187812_10317963	3300017821	Freshwater Sediment	MVELTGPETATSFAAPGQTRPAPAGTSSRRRTIISRLRPHTIQLCIHCRQNPAGFWASRNGDQTVRRPWCLSCCQDLDPACHHVRPFDS
Ga0187812_11392042	3300017821	Freshwater Sediment	AGQTRPALATTNSRQRTIPMPRLLPHTIQLCIHCRQNPAGFWVSRDSDQTVRRPWCLLCCQGLDPACHHIRPFDLQYLR
Ga0187816_100551983	3300017995	Freshwater Sediment	MVELTGPETATSFAAPGQTRPAPAGTSSRRRTIISRLRPHTIQLCIHCRQNPAGFWASRNGDQTVRRPWCLSCCQDLDPA
Ga0187788_103081551	3300018032	Tropical Peatland	FTQDLAAAASMAAGQNRPAPAATASRRRTISMSGLLPRTIQLCIHCRRNPAGFWVSRDSGQTVRRPWCLSCCQNLDPGRCHVQPFDS
Ga0210399_112946852	3300020581	Soil	SPTPTTTRSRQWTTTMPRLLPHTIQLCIHCRHNPAGFWVSRNGSRTARRPWCLSCCQDLDPGCYHVNPFDS
Ga0210404_106252462	3300021088	Soil	DPGGCVTAGPTRPAPPTMNSRRRTLAMPRLLPHTIQLCIHCRDRPAGFWVSCTGGQTVRRPWCLSCCEGLDRDRSDVIPFDS
Ga0247664_11061722	3300024232	Soil	MNLTLLRQILVRRPGTAIANRRRRTMTAPRRLPRTIQLCIHCRNNPAGFWVSRSSGQTVRRPWCLSCCQNLDRAGYHVQPFPS
Ga0247678_10942241	3300024325	Soil	MNLTLLRQILVRRPGTATANRRRRTTTAPRRLPRTIQLCIHCRNNPAGFWVSRSSGQTVRRPWCLSCCQNLD
Ga0207692_101317053	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSRIPRAGQHRPAATTTNSRRRAITKPRLLPHTIQLCIHCRQNPAGFWVSRNRSQTVRRPWCLSCCQALDPGRYHVRPFDS
Ga0207692_103391721	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	IRTKAVMNLTPLRQILARRPSPPAAGQPQPGPRPRTMTAPRRLPRTIQLCIHCRHNPAGFWVSRSSSQTVRRPWCLSCCQNLDPGRYHVQPFDN
Ga0207692_103967672	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VTAGHNKPALATANSARRTMTVPCLLPRTIQLCIHCGHNPAGFWVSRNSGQTVRRPWCLSCCQNLDQRCYRVQPFDG
Ga0207699_102216612	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MREEITMSRIPRAGQHRPAATTTNSRRRAITKPRLLPHTIQLCIHCRQNPAGFWVSRNRSQTVRRPWCLSCCQALDPGRYHVRPFDS
Ga0207693_100496071	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	AGSVAADRNKPAPTTKTRRSTITTARLLPHTIQVCIHCRQNPAGFWVSPTSGQTVRRPWCLSCCQDLDPGRYLAKPFDS
Ga0207693_105641042	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	HRIWAKAVMNLTLLRQILARRPSAPGAGQPQAGQLSSRRRTMSAPRRLPHTIQQCIHCRHNPAGFWVSRNSSQTVRRPWCLSCCQNLDPGRYHVQPFDS
Ga0207693_110434642	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MNLTPLRQILARRPSPPAGGQPQPGPRPRTMTAPRRLPRTIQLCIHCRHNPAGFWVSRSSSQTVRRPWCLSCCQNLDPGRYHVQPFDS
Ga0207693_112642001	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MREEITMSRIPRAGQHRPAATTTNSRRRAITKPRLLPHTIQLCIHCRHNPAGFWVSRNSDQTVRRPWCLSCCQYLDPARHHIRPFDP
Ga0207663_101197421	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VAADRNKPAPTTKTRRRTITTARLLPHTIQVCIHCRQNPAGFWVSPTSGQTVRRPWCLSCCQNLDQRCYRVQPFDG
Ga0207663_103060052	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MNLTPLRQILARRPSPPGAGHRRRRTMTARPRLPRTIQLCIHCRHNPAGFWVSRNSSQTVRRPWCLSCCQNLDPGRYHVQPFDN
Ga0207663_107107302	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MNLTLLRQILARRPGTATANRRRRTRTAPWRRPHTIQLCIHCRHNPAGFWVSRNSSQTVRRPWCLSCCQNLDPGPYHVQPFGS
Ga0207662_103188833	3300025918	Switchgrass Rhizosphere	MNLTLLRQILVRRPGTATANRRRRTMTAPRRLPRTIQLCIHCRDNPAGFWVSRSSGQTVRRPWCLSCCQNLDRAGYHVQPFPS
Ga0207687_113611181	3300025927	Miscanthus Rhizosphere	GFAGQFAPDVLAAATMAAGQNRPAPATANRRRRTTTTARPLPHTIQLCIHCRRNPAGFWVSRNGSQTVRRPWCLSCCQDLDPDANRIKPFDD
Ga0207664_101893582	3300025929	Agricultural Soil	MNLTLLRQILGRRPSPPAAGHRRRRTMTARPRLPRTIQLCIHCRHNPAGFWVSRNSSQTVRRPWCLSCCQNLDPGRYHAQPFGS
Ga0207665_104263942	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MNLTLLRQILARRPSAPGAGQPQAGQLSSRRRTMSAPRRLPHTIQQCIHCRHNPAGFWVSRNSSQTVRRPWCLSCCQNLDPGRYHVQPFDS
Ga0207674_118240882	3300026116	Corn Rhizosphere	QILVRRPGTATANRRRRTMTAPRRLPRTIQLCIHCRNNPAGFWVSRSSGQTVRRPWCLSCCQNLDRAGYHVQPFPS
Ga0247684_10642762	3300028138	Soil	MNLTLLRQILAGQNRPGTATASRRRRTRTAPRRLPHTIQLCIHCRHNPAGFWVSRTSSQTARRPWCLSCCQHLDPGRHHVQPFGS
Ga0247689_10030332	3300028281	Soil	MNLTLLRQILVRRPGTATANRRRRTTTAPRRLPRTIQLCIHCRNNPAGFWVSRSSGQTVRRPWCLSCCQNLDRAGYHVQPFPS
Ga0268264_101355442	3300028381	Switchgrass Rhizosphere	MNRTLLRQILVRRPGTATANRRRRTMTAPRRLPRTIQLCIHCRNNPAGFWVSRSSGQTVRRPWCLSCCQNLDRAGYHVQPFPS
Ga0307305_101246991	3300028807	Soil	VAAGQNRPGTATANRRRRTMTAPRRLPHTIQLCIHCRHNPAGFWVSRNSSQTVRRPWCLSCCQNLDPGRYHVQPFDS
Ga0307305_104130081	3300028807	Soil	VAADQHRPTPTTTGSRQRTTTMPRLLPHTIQLCIHCRHNPAGFWVSRNGSRTARRPWCLSCCQDLDPGCYHVYPFDS
Ga0318516_104350062	3300031543	Soil	MNLTPLRQILARRPSPPSAGQPQPGQPQPGQLSRHRLPAGRWRPHTIQLCIHCQHNPAGFWVSRNSSQTVRRPWCLSCCQSLDPGCYHVRPFES
Ga0318534_102052771	3300031544	Soil	VAAGQNRPAAPATANPRRPSITVPFRLTHTIQLCIHCRHNPAGFWVSHSGGQTVRRPWCLSCCQNLDPACHHVTPLDSQNNAKAGTPRPFDAHPPRH
Ga0318541_106736012	3300031545	Soil	RGPERGDRQNRPTLVTANSGRRAMAMPRLLPYTIQLCIHCRHNPAGFWVSRSTGQTVRRPWCLSCCQDLDPRCYHVQPFDS
Ga0318538_101649532	3300031546	Soil	VAAGQNRPAAPATANPRRPSITVPFRLTHTIQLCIHCRHNPAGFWVSHSGGQTVRRPWCLSCCQNLDPACHHV
Ga0318538_102347542	3300031546	Soil	VHPGASRGPERGDRQNRPTLVTANSGRRAMAMPRLLPYTIQLCIHCRHNPAGFWVSRSTGQTVRRPWCLSCCQDLDPRCYHVQPFDS
Ga0310915_102799552	3300031573	Soil	ASVAAGRTRPAPTTASSRRRPIPVLRLLPHTIQLCIHCRHNPAGFWVSRDSRQTVRRPWCLSCCQHLDPASHHIAPFDP
Ga0318555_107796181	3300031640	Soil	TLEAGQNWPARATANTRQRTMAAPRLLPHTIQLCIHCRQNPAGFWVSRASDQTVRRPWCLSCCQDLDPACHHIRPFDLQYLR
Ga0318561_101834021	3300031679	Soil	VAAGQNRPAAPATANPRRPSITVPFRLTHTIQLCIHCRHNPAGFWVSHSGGQTVRRPWCLSCCQNLDPACHHVTPLDS
Ga0318561_104433252	3300031679	Soil	PSTANSRRRTIPTPRLRLHTIQQCIHCRHNPAGFWVSRDSRQTVRRPWCLSCCQHLDPASHHIAPFDP
Ga0318574_103792731	3300031680	Soil	QDRPAPTMTSSRWRTRTTPRLVPRTIQLCIHCRHNPAGFWVSRTGDQTVRRPWCLFCCHDLDPDCYHIKPFDS
Ga0318560_102336902	3300031682	Soil	VAAGQNRPAAPATANPRRPSITVPFRLTHTIQLCIHCRHNPAGFWVSHSGGQTVRRPWCLSCCQNLDP
Ga0306917_105420252	3300031719	Soil	SVTVGQAGPAPSTANSRRRTIPTPRLRLHTIQQCIHCRHNPAGFWVSRDSRQTVRRPWCLSCCQHLDPASHHIAPFDP
Ga0307469_110372932	3300031720	Hardwood Forest Soil	RGFAARCIQAVAAAATVAAGQNRPGTATANRRRRTRTAPRRLPHTIQLCIHCRHNPAGFWVSRNSSQTVRRPWCLSCCQNLDRAGYHVQPFPS
Ga0318493_101940491	3300031723	Soil	VAAGQNRPAAPATANPRRPSITVPFRLTHTIQLCIHCRHNPAGFWVSHSGGQTVRRPWCLSCCQNLDPACHHVTPLDSQNNAK
Ga0318501_102181521	3300031736	Soil	VAAGQNRPAAPATANPRRPSITVPFRLTHTIQLCIHCRHNPAGFWVSHSGGQTVRRPWCLSCCQNLDPACHHVTPLDSQN
Ga0318494_102198842	3300031751	Soil	GQAGPAPSTANSRRRTIPTPRLRLHTIQQCIHCRHNPAGFWVSRDSRQTVRRPWCLSCCQHLDPASHHIAPFDP
Ga0318521_108835701	3300031770	Soil	ATSNFRRRTIPMPRLLPHTIQLCIHCRQNPAGFWVSRDCDQTVRRPWCLSCCQDLDPASHHIRPFDLQYLR
Ga0318498_100948041	3300031778	Soil	DRPAPTMTSSRWRTRTTPRLVPRTIQLCIHCRHNPAGFWVSRTGDQTVRRPWCLFCCHDLDPDCYHIKPFDS
Ga0318548_103383971	3300031793	Soil	VAAGQNRPAAPATANPRRPSITVPFRLTHTIQLCIHCRHNPAGFWVSRSTGQTVRRPWCLSCCQDLDPRC
Ga0318548_105055931	3300031793	Soil	AGPAPSTANSRRRTIPTPRLRLHTIQQCIHCRHNPAGFWVSRDSRQTVRRPWCLSCCQHLDPASHHIAPFDP
Ga0318557_100873911	3300031795	Soil	NWPAPATANSRRRTITMPRLLPHTIQLCIHCRQNPAGFWVSRDCDQTVRRPWCLSCCQDLDPARHHIRPFDLQYLR
Ga0318557_101753162	3300031795	Soil	GASRGPERGDRQNRPTLVTANSGRRAMAMPRLLPYTIQLCIHCRHNPAGFWVSRSTGQTVRRPWCLSCCQDLDPRCYHVQPFDS
Ga0318576_105741102	3300031796	Soil	RHRPAPATENHRRHTMTTPFPQLHTIQLCIHCRQNPAGFWVSRDCDQTVRRPWCLSCCQDLDPARHHIRPFDLQYLR
Ga0318567_101674861	3300031821	Soil	ARTRPAPTTASCRRRPIPVLRLLPHTIQLCIHCRHNPAGFWVSRTGDQTVRRPWCLFCCHDLDPDCYHIKPFDS
Ga0318567_103142752	3300031821	Soil	ERGDRQNRPTLVTANSGRRAMAMPRLLPYTIQLCIHCRHNPAGFWVSRSTGQTVRRPWCLSCCQDLDPRCYHVQPFDS
Ga0318567_105977771	3300031821	Soil	VGQAGPAPSTANSRRRTIPTPRLRLHTIQQCIHCRHNPAGFWVSRDSRQTVRRPWCLSCCQHLDPASHHIAPFDP
Ga0306919_102226001	3300031879	Soil	VAAGQNRPAAPATANPRRPSITVPFRLTHTIQLCIHCRHNPAGFWVSHSGGQTVRRPWCLSCCQNLDPACHHVTPLDSQNNAKAGTP
Ga0306919_112757581	3300031879	Soil	AHVTAGQTRPVPATTNSRRHAITTPGLLPHTIQLCVHCRHNPAGFWISHDSDQTVRRPWCLCCCQDLDPACHHIKPFDP
Ga0306925_117243291	3300031890	Soil	SLAAGQDRPPAATTNSRRRTIPVPHLLHTIQLCIHCRHNPAGFWVSGTGGQTVRRPWCLSCCQDLDPACHHIRPFDLEYLR
Ga0318522_104180132	3300031894	Soil	AATASVAAGRTRPAPTTASSRRRPIPVLRLLPHTIQLCIHCRHNPAGFWVSRTGDQTVRRPWCLFCCHDLDPDCYHIKPFDS
Ga0318551_100686152	3300031896	Soil	IQDIAAAASVTVGQAGPAPSTANSRRRTIPTPRLRLHTIQQCIHCRHNPAGFWVSRDSRQTVRRPWCLSCCQHLDPASHHIAPFDP
Ga0318520_109060431	3300031897	Soil	TANSRRRTIPTPRLRLHTIQQCIHCRHNPAGFWVSRDSRQTVRRPWCLSCCQHLDPASHHIAPFDP
Ga0318531_105235791	3300031981	Soil	VTVGQAGPAPSTANSRRRTIPTPRLRLHTIQQCIHCRHNPAGFWVSRDSRQTVRRPWCLSCCQHLDPASHHIAPFDP
Ga0318506_104699791	3300032052	Soil	PERGDRQNRPTLVTANSGRRAMAMPRLLPYTIQLCIHCRHNPAGFWVSRSTGQTVRRPWCLSCCQDLDPRCYHVQPFDS
Ga0318524_106152642	3300032067	Soil	AGQTRPVPATTNSRRHAITTPGLLPHTIQLCVHCRHNPAGFWISHDSDQTVRRPWCLCCCQDLDPACHHIKPFDP
Ga0306924_104208311	3300032076	Soil	VAAGQNRPAAPATANPRRPSITVPFRLTHTIQLCIHCRHNPAGFWVSHSGGQTVRRPWCLSCCQNLDPACHHVTPLDSQNNAKAGTPRPFD
Ga0306920_1012007562	3300032261	Soil	AGQNWPAPATAIPRRRTIAMPRLLPHTIQLCIHCQRNPAGFWVSRTSGQTARRPWCLSCCHDLDPPCYHIKPFDS
Ga0306920_1019494121	3300032261	Soil	NTRQRTMAAPGLLTHTIQLCIHCRQNPAGFWVSRTSDRTVRRPWCLSCCQDLDPACHHVRPFDLQYLR
Ga0335081_103597161	3300032892	Soil	EDASVVAGVNRPAPTTANSRRRAMTMPRLLPRTIQLCIHCRQNPAGFWVSRNSGQTVRRPWCLTCCQNLDPRRYHVQPLDS
Ga0335081_126118121	3300032892	Soil	RPAPTITSSRWRTRTTLRLVPRTIQPCIHCRHNPAGFWVSYTSGQTVRRPWCLSCCQDLDPRCHHIQPFDS
Ga0335073_119012841	3300033134	Soil	VQHMAAAASVAADEHRPAPTTTGSRQRTTTMLRLLPHTIQLCIHCRHNPAGFWVSRNDSRTSRRPWCLSCCQDLDPGCYHVNSFDS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F055990

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences