Metagenome / Metatranscriptome Family F055998

Basic Information
Family ID	F055998
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	42 residues
Representative Sequence	MSSALSEGPGGPGPGAAAGTVFRSELNPVDFLYRAAYLYPDK
Number of Associated Samples	120
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	2.17 %
% of genes from short scaffolds (< 2000 bps)	1.45 %
Associated GOLD sequencing projects	116
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Most Common Taxonomy
Group	Unclassified (98.551 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.884 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.652 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.71% β-sheet: 0.00% Coil/Unstructured: 84.29%
Feature Viewer

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Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF02913	FAD-oxidase_C	48.55
PF13672	PP2C_2	4.35
PF13376	OmdA	2.90
PF04116	FA_hydroxylase	2.17
PF00501	AMP-binding	1.45
PF14019	DUF4235	1.45
PF00005	ABC_tran	1.45
PF00196	GerE	0.72
PF04075	F420H2_quin_red	0.72
PF06277	EutA	0.72
PF02720	DUF222	0.72
PF03737	RraA-like	0.72
PF00872	Transposase_mut	0.72
PF01565	FAD_binding_4	0.72
PF00355	Rieske	0.72
PF00528	BPD_transp_1	0.72
PF05988	DUF899	0.72
PF00296	Bac_luciferase	0.72
PF04909	Amidohydro_2	0.72
PF13560	HTH_31	0.72
PF12840	HTH_20	0.72
PF12697	Abhydrolase_6	0.72
PF13601	HTH_34	0.72
PF13193	AMP-binding_C	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	48.55
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	2.17
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	0.72
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.72
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.72
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	0.72
COG4819	Ethanolamine utilization protein EutA, possible chaperonin	Amino acid transport and metabolism [E]	0.72

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.55 %
All Organisms	root	All Organisms	1.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.55 %
cellular organisms	root	All Organisms → cellular organisms	1.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.55 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.55 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.55 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.55 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.55 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.55 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.55 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.72 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005537\|Ga0070730_10901953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	554	Open in IMG/M
3300017955\|Ga0187817_10080128	All Organisms → cellular organisms → Bacteria	2040	Open in IMG/M
3300032042\|Ga0318545_10333148	Not Available	546	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.75%
Host-Associated	Host-Associated	7.25%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.06%
Aquatic	Environmental → Aquatic	8.70%
Plants	Host-Associated → Plants	7.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.33%
Freshwater	Environmental → Aquatic → Freshwater	7.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.90%
Sediment	Environmental → Aquatic → Sediment	1.45%
Peat	Environmental → Terrestrial → Peat	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.84%
Loam	Environmental → Terrestrial → Soil → Loam	7.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.45%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.72%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	10.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.52%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.35%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.35%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.17%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.45%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.45%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.45%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.72%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.72%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.72%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010877	Boreal forest soil eukaryotic communities from Alaska, USA - W3-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012517	Unplanted soil (control) microbial communities from North Carolina - M.Soil.6.yng.070610	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024254	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK02	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1002783731	3300002245	Forest Soil	MNAELPGAPGHGNVPGKVFRTELNPVDFLERAAYIY
Ga0062384_1004917092	3300004082	Bog Forest Soil	MSGALSATPGGPGPEAIAGQVFRSELNPVGFLERAAYIYPEKVAIVDGDRRL
Ga0066869_100495911	3300005165	Soil	MSSALSEGPGGPGPEAAAGTVFRSELNPVDFLYRAAYLYPDKVAV
Ga0066684_106243752	3300005179	Soil	MTGVSPAVPGVPAGEAAPGTVFRSELNPVDFLHRAAYLYPDKV
Ga0068868_1018466361	3300005338	Miscanthus Rhizosphere	MSSALSEGPGQPGPGAAAGTVFRSELNPVDFLYRAAYLYPDKVAVAAGKRRYT
Ga0070692_108584711	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MSGAIPAAPGAGAVPGKVFRTELNPVDFLHRAAYMYPEKVAVV
Ga0068867_1004696491	3300005459	Miscanthus Rhizosphere	MSSALSEGPGRPGPGAAAGTVFRSELNPVDFLYRAAYLYPD
Ga0070706_1014630462	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSGALSGDPGVPGPGAAAGAVFRSELNPVDFLHRAAYIYPDNVAVVHGKRR
Ga0070730_109019531	3300005537	Surface Soil	MSGSSAAAAGTGVVPGQVFRSELNPVDFLQRAAYIYPDK
Ga0066694_104119382	3300005574	Soil	MTGVSPAVPGVPAGEAAPGKVFRSELNPVDFLHRAAYLYPDK
Ga0068857_1015863522	3300005577	Corn Rhizosphere	MSGAIPAALGAEAVPGKVFRSELNPVDFLHRAAYMYPEKVAVVH
Ga0075017_1008624282	3300006059	Watersheds	MSDVLSATPGVPGPGAVPGKVFRSELNPVDFLRRAAYM
Ga0070716_1002760392	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSSAVSEGPGGPGPGAAAGTVFRSELNPVDFLYRAAYLYPDKV
Ga0070712_1015960301	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MGDVFSAATGAPGAVPGQVFRSELNPVDFLHRAAYIYPD
Ga0074053_120002671	3300006575	Soil	MSSALSEGPGGPGPGAAAGTVFRSELNPVDFLYRAAYLY
Ga0074064_118139571	3300006603	Soil	MSGAPPGHPGGPGPGAAAGTVFRSELNPVDFLYRAAYLYPDKVAVAAGKRRY
Ga0074062_129156811	3300006606	Soil	MSGAPPEHPGGPGPGAEAGTVFRSELNPVDFLYRAA
Ga0075425_1026236502	3300006854	Populus Rhizosphere	MSSALSEGPGRPGPGAAAGTVFRSELNPVDFLYRAAYLYPDK
Ga0075424_1013339541	3300006904	Populus Rhizosphere	MSSALSEGPGGPGPGAAAGTVFRSELNPVDFLYRAAYLYPDK
Ga0079219_111416681	3300006954	Agricultural Soil	MSEAASEHPGGPGPGAAAGTVFRSELNPVDFLYRAAYLYPDKVAVV
Ga0079219_114906781	3300006954	Agricultural Soil	MSGVLSESPGAPGPGAAAGTVFRSELNPVDFLRRAAYIYPEK
Ga0099794_107589082	3300007265	Vadose Zone Soil	MSGALSGNPGGPGPGAAAGTVFRSELNPVDFLHRAAYIG*
Ga0105245_117702951	3300009098	Miscanthus Rhizosphere	MMSSALSEGPGRPGPGAAAGTVFRSELNPVDFLYRAAYLYPDKVAVAA
Ga0116214_14329911	3300009520	Peatlands Soil	MMSGALSATPDAPGPGAVAGKVFRSELNPVGFLDRAAYI
Ga0116222_12755422	3300009521	Peatlands Soil	MMSGVLSAAPGVPGPEAVAGKVFRSELNPVDFLDRAAY
Ga0116216_108052641	3300009698	Peatlands Soil	MMSGALSAPPGVPGPGVVAGKVFRSELNPVGFLDRAAYIYPGKVAVVDGDR
Ga0116217_106504592	3300009700	Peatlands Soil	MSGMFSATPGAPGPEAVPGKVFRSELNPVDFLRRAAYMYPAKVAVVDG
Ga0126380_122945891	3300010043	Tropical Forest Soil	MGDVLSAATGAPGAVSGSVFRSELNPVDFLHRAAYIYPDKTAVVSG
Ga0126373_112749361	3300010048	Tropical Forest Soil	MGDVLSAATGTPGAVSGKVFRSELNPVEFLHRAAYIYPDKTA
Ga0126318_102366681	3300010152	Soil	MSGALSQSPGVPGPGAAAGAVFRSELNPVDFLRRAAYIYPEKVAVVDGGR
Ga0126370_100745773	3300010358	Tropical Forest Soil	MGDVLSAATSTPGAVSGKVFRSELNPVEFLHRAAYIYPDK
Ga0126372_121390582	3300010360	Tropical Forest Soil	MGDVLSVAAGAPGAVSGSVFRSELNPVDFLHRAAYIY
Ga0136449_1002230885	3300010379	Peatlands Soil	MMSGALSATPDAPGPGAVAGKVFRSELNPVDFLDRAAYIYPEKVAVVD
Ga0136449_1015064491	3300010379	Peatlands Soil	MMSGALSAPPGVPGPGVVAGKVFRSELNPVGFLDRAAYIYPGKVAVVDGDRRLRYRE
Ga0136449_1020312961	3300010379	Peatlands Soil	MSDVLSATPGVPGPEAVPGKVFRSELNPVDFLRRAAYM
Ga0136449_1028902371	3300010379	Peatlands Soil	MMSGVLSATPGVPGPEAVAGKVFRSELNPVDFLDRA
Ga0136449_1030381552	3300010379	Peatlands Soil	MSGALAEVPGPGAVPGRVFRSELNPVDFLHRAAYIYPDKIAVVDGGRRY
Ga0134124_105495812	3300010397	Terrestrial Soil	MMSSALSEGPGRPGPGAAAGTVFRSELNPVDFLYRAAY
Ga0134121_115391801	3300010401	Terrestrial Soil	MSSALSEGPGRPGPGAAAGTVFRSELNPVDFLYRAAYLYPDKV
Ga0126356_101066532	3300010877	Boreal Forest Soil	MMSGALSEDPGRPGPGAAAGTVFRSELNPVDFLYRAAYLYPDKVAVAAG
Ga0137391_110322171	3300011270	Vadose Zone Soil	MSEAPLGTPGVPGPGAGAGTVFRSELNPVDFLHRAAYMYP
Ga0137374_106843501	3300012204	Vadose Zone Soil	MSGVFSAPPGVPAGGTVPGKVFRSELNPVDFLHRAAYLYPDKV
Ga0157354_10076521	3300012517	Unplanted Soil	RRHAMSEAPSEHPGGPEPGAAAGTVFRSELNPVDFLYRAAYL*
Ga0134087_106620021	3300012977	Grasslands Soil	MSGAPPEHPGGPRPGAAAGTVFRSELNPVDFLYRAAYL
Ga0157375_127301272	3300013308	Miscanthus Rhizosphere	MSSALSEGPGRPGPGAAAGTVFRSELNPVDFLYRA
Ga0182041_101703441	3300016294	Soil	MGDVLSAATGASGAVSGKVFRSELNPVDFLHRAAYIYPDKTAVV
Ga0182033_116012911	3300016319	Soil	MGDVLSAATGASGAVSGKVFRSELNPVDFLHRAAYI
Ga0182033_120383632	3300016319	Soil	MSEALSPNPGGHGAGAGAGTVFRSELNPVDFLHRAAYLYPDKVAVV
Ga0182035_119089212	3300016341	Soil	MGDVFSAATGVPGRVFRSELNPVDFLYRAAYIYPDKTAVVSG
Ga0182040_119394891	3300016387	Soil	MSGVLSEAPGVPGSGAVPGQVFRSELNPVDFLHRAAYIYPEQ
Ga0182037_106768293	3300016404	Soil	VTSTYSEIPGVPGAAAASGKVFRSELNPVDFLHRAAYI
Ga0187802_101195342	3300017822	Freshwater Sediment	MSALSGAPGTGTVPGQVFRSELNPVDFLHRAAYIYPD
Ga0187807_10176182	3300017926	Freshwater Sediment	MSGALSESPGRPGPEAGAGTVFRPELNPVDFLYRAA
Ga0187807_13233212	3300017926	Freshwater Sediment	MSGDFAAVPGVTADEAAPAKVFRSELNPVEFLHRAAYL
Ga0187817_100140082	3300017955	Freshwater Sediment	MSGALSESPGRPGPEAGAGTVFRPELNPVGFLYRAA
Ga0187817_100801285	3300017955	Freshwater Sediment	MSDVLSATPGVPGPEAVPGKVFRSELNPVDFLRRAAYMYPEKV
Ga0187779_101932012	3300017959	Tropical Peatland	MVTSSYSEIPGVPGAEAASAQVFRSELNPVDFLSRAA
Ga0187780_109868892	3300017973	Tropical Peatland	MSSALSEASGVPGTGAVAETVFRSELNPVDFLHRAAYI
Ga0187782_103273444	3300017975	Tropical Peatland	MSGVLSQAPGGPGPQAVPGQVFRSELNPVDFLYRAAYIYP
Ga0187822_103201731	3300017994	Freshwater Sediment	QAMSGALSESPGRPGPEAGAGTVFRPELNPVDFLYRAA
Ga0187887_108624472	3300018043	Peatland	MSGVLSAAPGVPGPEAAAGKVYRSEQNPVDFLDRAAY
Ga0187766_112782811	3300018058	Tropical Peatland	MISTYSARPDAAATETAVGKVFRSELNPVDFLHRAAYMYPDKIAVVDRERRYSYRQL
Ga0187773_104904951	3300018064	Tropical Peatland	MSEALVGTAGGLAPGAGAGTVFRSELNPVDFLHRAAYMY
Ga0187771_111827161	3300018088	Tropical Peatland	MSGVLSEAFGVPGPEAVPGKVFRSELNPVDFLHRSAYIYPDK
Ga0193730_11403261	3300020002	Soil	MTSALSPNPGGPGAGAGAGTVFRSELNPVEFLNRAAYMYPD
Ga0206353_115400891	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MSGAISAAPGAEAVPGKVFRSELNPVDFLHRAAYMYPE
Ga0210396_105400423	3300021180	Soil	MSGATLETSGMPGPGAAAGKVFRTELNPVDFLYRAAYIYPEKIAVVDGERRY
Ga0210396_116744922	3300021180	Soil	MSGATLETSGVPGPGAAAGKVFRTELNPVDFLYRAAYIYPEKIAVVDGERRY
Ga0210383_100205508	3300021407	Soil	MSGALSEDPGRPRLGAAARTVFRSELNPVDFLYRAAYLYPDKVAATGWQA
Ga0210398_113929891	3300021477	Soil	MSGVLSAAQGVPGPETATGKADKVFRSEQNPVDFLNRAA
Ga0210402_109799381	3300021478	Soil	MSEALSPNPGGPGPDAGAGTVSRSELNPVDFLHRAAYV
Ga0210402_119539451	3300021478	Soil	MSEALSPNPGGPGAGTGAGTAFRSELNPVDFLYRAAYL
Ga0247661_10624442	3300024254	Soil	MSSALSEGPGRPGPGAAAGTVFRSELNPVDFLYRAAYVY
Ga0207692_109717962	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MSDAFSETPDGPGAGAGAGTVFRSELNPVDFLYRAAYLYPDKVAVA
Ga0207647_107324922	3300025904	Corn Rhizosphere	MSGAIPAALGAEAVPGKVFRSELNPVDFLHRAAYMYPEKIAV
Ga0207663_102275673	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MGDMLPAATGVPGTVPGKVFRSELNPVDFLHRAAYIYPDKTAVVSAD
Ga0207681_107880731	3300025923	Switchgrass Rhizosphere	MSDALSKGPGRPGSGAAAGTVFRSELNPVDFLYRAAYLY
Ga0207664_100543891	3300025929	Agricultural Soil	MSEALAGTPGVPGPGTGAGTVFRSELNPVDFLNRAAYMYP
Ga0207664_106915362	3300025929	Agricultural Soil	MSGAIPAALGAEAVPGKVFRSELNPVDFLHRAAYMYPE
Ga0207709_105715862	3300025935	Miscanthus Rhizosphere	MSSALSEGPGRPGPGAAAGTVFRSELNPVDFLYRAAYLYPDNVAVAAGK
Ga0208199_10560341	3300027497	Peatlands Soil	MSGVLSATPGVPGPEAVAGKVFRSELNPVDFLDRAA
Ga0208324_11873222	3300027604	Peatlands Soil	MSEAPSGTPGVPGPGPGAGTVFRSELNPVDFLHRAAYMYPDKVAVVYG
Ga0209530_10929962	3300027692	Forest Soil	MSGALSATPDVPGPEAVAGQVFRSELNPVGFLDRAAYI
Ga0207862_10834681	3300027703	Tropical Forest Soil	MVTSTYSEIPGRSGVGEASGQVFRSELNPVDFLHRAAYIYPDKAAVVDGERR
Ga0209039_103286831	3300027825	Bog Forest Soil	MSDVLSATPGVPGPEAVPGKVFRSELNPVDFLRRAAYMY
Ga0209415_106207632	3300027905	Peatlands Soil	MSGVLSAAPGVPGPEAVAGKVFRSELNPVDFLDRAAYIYPEKVAVVDGDRRLR
Ga0209698_104202321	3300027911	Watersheds	MSVFSAIPGAAGTGAVPEKVFRSELNPVDFLYRAAYVY
Ga0307309_102030811	3300028714	Soil	MSGAPPEYPGGPGPGAAAGTVFRSELNPVDFLYRAA
Ga0307280_100184952	3300028768	Soil	MSGAPPEYPGGPGPGAAAGTVFRSELNPVDFLYRAAYLYPD
Ga0307312_101541231	3300028828	Soil	MSGAPPEYPGGPGPGAAAGTVFRSELNPVDFLYRAAYLYPDKVGVAAGKRR
Ga0311370_102078041	3300030503	Palsa	MSGVLSAAPGGPGPETAAGKADKVFRSEQNPVDFL
Ga0265760_102815571	3300031090	Soil	MSGVASAAAGGPGPGVAAGKVFRSELNPVDFLVRAAFVYPEKVAV
Ga0318516_102857672	3300031543	Soil	MSGVLSAAPEPSAAGAVPGKVFRSELNPVDFLDRAAYIYPDKTA
Ga0318516_103777031	3300031543	Soil	MNDALSPNPGGPGAGAVAGTVFRSELNPVDFLHRASYMYPD
Ga0318516_108674762	3300031543	Soil	MSEALLRPAGEPGPGAEAGTVFRSELNPVDFLHRAAYMYPDKVA
Ga0318538_100763521	3300031546	Soil	MGDVLSAATDASEAVSAKVFRSELNPVDFLHRAAYIYPD
Ga0318515_100122675	3300031572	Soil	MGDVLSAATGASGAVSGKVFRSELNPVDFLHRAAYIYPDKTAVVSG
Ga0310915_105470792	3300031573	Soil	MSEALSPDPGRPGPGAGAGTVFRSELNPVDFLHRAAY
Ga0310686_1122524711	3300031708	Soil	MSGDFAAVPGVTADGAAPAKVFRSELNPVEFLHRAAYLYPVKVAVVDGGRRYRYRDLAERSWR
Ga0318496_102281301	3300031713	Soil	MGDVLSAATGASGAVSGKVFRSELNPVDFLHRAAYIYPDKTAVVSGHR
Ga0318496_103904351	3300031713	Soil	MSGVLSEAPGAPGSGTVPGQVSRSELNPVDFLHRAAYIYPEQVAVVD
Ga0318493_106538081	3300031723	Soil	MGDVFSAAAGVPGQVYRSELNPVDFLHRAAYIYPDR
Ga0318500_103073881	3300031724	Soil	MGDVLSAATDASEAVSAKVFRSELNPVDFLHRAAYI
Ga0318501_105350872	3300031736	Soil	MGDVLSAATDASGAVPGKVFRSELNPVDFLHRAAYI
Ga0318501_106161751	3300031736	Soil	MSGVLSEAPGVPGSEAVPGKVFRSELNPVDFLHRAAYIY
Ga0318502_103571111	3300031747	Soil	MGDVLSAATGASGAVSGKVFRSELNPVDFLHRAAYIYPDKTA
Ga0318494_108487682	3300031751	Soil	MGDVFSAAAGVPGQVYRSELNPVDFLHRAAYIYPDRTAV
Ga0318535_101350441	3300031764	Soil	MGDVLSAATDASEAVSAKVFRSELNPVDFLHRAAYIYPDKTAVV
Ga0318509_107043071	3300031768	Soil	MSEALSPNPGGHGADAGAGTVFRSELNPVDFLHRAAYLYPDKV
Ga0318566_100453362	3300031779	Soil	MNDALSPNPGGPGAGAVAGTVFRSELNPVDFLHRASY
Ga0318547_101069004	3300031781	Soil	MSGVLSAAPEPSAAGAVPGKVFRSELNPVDFLDRAAYIY
Ga0318497_102951852	3300031805	Soil	MGDVLSAATGASGAVSGKVFRSELNPVDFLHRAAYIYPDKTAV
Ga0318499_103744452	3300031832	Soil	MSEALSPNPGGPGAGAGAGTAFRSELNPVDFLYRAAYLYPDK
Ga0306925_122384772	3300031890	Soil	MTDVLSAAPEPPGAGAVPGKVFRSELNPVDFLERAA
Ga0318536_105215401	3300031893	Soil	MSGVLSAAPEPSAAGAVPGKVFRSELNPVDFLDRAAYIYPDK
Ga0318522_101148692	3300031894	Soil	MGDVLSAATGASGAVSGKVFRSELNPVDFLHRAAY
Ga0318551_100849451	3300031896	Soil	MGDVLSAATGASGAVSGKVFRSELNPVDFLHRAAYIYPDKTAVVS
Ga0318520_104843012	3300031897	Soil	MSGVLSEAPGVPGSEAVPGKVFRSELNPVDFLHRAAYIYPDQV
Ga0310916_105113962	3300031942	Soil	VTSTYSEIPGVPGAAAASGKVFRSELNPVDFLHRAAYIYPDKIA
Ga0310910_114646302	3300031946	Soil	MGDVLSAATGASGAVSGKVFRSELNPVDFLHRAAYIYPDK
Ga0318530_102997951	3300031959	Soil	MSGVLSAAPEPSAAGAVPGKVFRSELNPVDFLDRAAYI
Ga0318563_105922652	3300032009	Soil	MSEALSPNPGGHGAGAGTGTVFRSELNPVDFLHRAAYLYPDKVAVVH
Ga0318569_101664482	3300032010	Soil	MSEALSPDPGRPGPGAGAGTVFRSELNPVDFLHRAAYMYPDNVAVVHGKRRY
Ga0318569_104210181	3300032010	Soil	MSVFSATPGTAGTGVVPAKVFRSEMNPVDFLHRAAYVYPDKVAVVDS
Ga0318507_102138252	3300032025	Soil	MNDALSPNPGGPGAGAVAGTVFRSELNPVDFLHRASYMYPDKVAVA
Ga0310911_101749751	3300032035	Soil	MSEALSPDPGRPGPGAGAGTVFRSELNPVDILHRAAYMYPDN
Ga0318559_104045332	3300032039	Soil	MNDALSPNPGGPGAGAVAGTVFRSELNPVDFLHRASYM
Ga0318545_103331482	3300032042	Soil	VSTVSASPDTADAEPVPGKVFRSELNPVDFLHRAAYMYPDK
Ga0306924_120355051	3300032076	Soil	MSVFSATPSAGGTGVVPDKVFRSELNPVDFLYRAAYVYPDKAAVV
Ga0306924_120891061	3300032076	Soil	MSGVLSEAPGVPGSEAVPGKVFRSELNPVDFLHRAAYIYPD
Ga0318525_103052691	3300032089	Soil	MGDVLSAATGASGAVSGKVFRSELNPVDFLHRAAYIYPD
Ga0318577_101685351	3300032091	Soil	MSEALSPDPGRPGPGAGAGTVFRSELNPVDFLHRAAYMYPDNVAVVHGTRRYSY
Ga0311301_102340751	3300032160	Peatlands Soil	MSGALSATPDAPGPGAVAGKVFRSELNPVDFLDRAAYIYPEKVAVVD
Ga0311301_112147061	3300032160	Peatlands Soil	MSGALSAPPGVPGPGVVAGKVFRSELNPVGFLDRAAYIYPGKVAVVDGDRRLRYREL
Ga0335069_118979652	3300032893	Soil	MSGVLSESPGVPGPGAAAGTVFRSELNPVDFLHRAAYIYPEKVAVVDGGRRYT
Ga0335083_104854152	3300032954	Soil	MSEALSPNPGRPGPDAGAGTVSRSELNPVDFLHRAAYMYPDKV
Ga0335076_114864761	3300032955	Soil	MSSALSEGPGRPGPGAAAGTVFRSELNPVDFLYRAAYLYPDKVA
Ga0318519_104906252	3300033290	Soil	MSEALLRTAGEPGPGGGAGTVFRSELNPVDFLYRAAYM

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055998

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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