Metagenome / Metatranscriptome Family F056013

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F056013
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	83 residues
Representative Sequence	ASIYNHALTVGFSRGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQEAAPQPAAPQPAAVQRHEDRAALAAAVRPCRLC
Number of Associated Samples	123
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.36 %
% of genes near scaffold ends (potentially truncated)	81.88 %
% of genes from short scaffolds (< 2000 bps)	74.64 %
Associated GOLD sequencing projects	117
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (65.217 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.710 % of family members)
Environment Ontology (ENVO)	Unclassified (28.986 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (35.507 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.36% β-sheet: 0.00% Coil/Unstructured: 43.64%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF04075	F420H2_quin_red	8.70
PF00106	adh_short	6.52
PF00248	Aldo_ket_red	5.80
PF00196	GerE	5.07
PF13191	AAA_16	3.62
PF07859	Abhydrolase_3	3.62
PF00296	Bac_luciferase	3.62
PF12680	SnoaL_2	2.90
PF02604	PhdYeFM_antitox	1.45
PF13462	Thioredoxin_4	1.45
PF00491	Arginase	1.45
PF00440	TetR_N	1.45
PF07690	MFS_1	1.45
PF01370	Epimerase	1.45
PF05368	NmrA	0.72
PF13561	adh_short_C2	0.72
PF03795	YCII	0.72
PF13592	HTH_33	0.72
PF00578	AhpC-TSA	0.72
PF13280	WYL	0.72
PF13401	AAA_22	0.72
PF00378	ECH_1	0.72
PF00877	NLPC_P60	0.72
PF13460	NAD_binding_10	0.72
PF13546	DDE_5	0.72
PF01012	ETF	0.72
PF01872	RibD_C	0.72
PF00753	Lactamase_B	0.72
PF08241	Methyltransf_11	0.72
PF01906	YbjQ_1	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	3.62
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	3.62
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	1.45
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	1.45
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	1.45
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.72
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.72
COG0791	Cell wall-associated hydrolase, NlpC_P60 family	Cell wall/membrane/envelope biogenesis [M]	0.72
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.72
COG2025	Electron transfer flavoprotein, alpha subunit FixB	Energy production and conversion [C]	0.72
COG2086	Electron transfer flavoprotein, alpha and beta subunits	Energy production and conversion [C]	0.72
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.22 %
Unclassified	root	N/A	34.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.22 %
Unclassified	root	N/A	34.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.22 %
Unclassified	root	N/A	34.78 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	52.17 %
Unclassified	root	N/A	34.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.45 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	34.78 %
Unclassified	root	N/A	34.78 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.78 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22.46 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.72 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.72 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.78 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	6.52 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.17 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.45 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.45 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	0.72 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.72 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.72 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.78 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	6.52 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.17 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.45 %
Kribbellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae	0.72 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.72 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.72 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.72 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.72 %
Azospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.78 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	6.52 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.17 %
unclassified Azospirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum	0.72 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.72 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.72 %
Saccharomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora	0.72 %
Kutzneria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	0.72 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.72 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.72 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.78 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	5.07 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.17 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.72 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.72 %
Saccharomonospora cyanea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora cyanea	0.72 %
Azospirillum sp. B510	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B510	0.72 %
Kutzneria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	0.72 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.72 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.72 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.78 %
Streptomyces sp. WAC01280	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WAC01280	3.62 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.17 %
Streptomyces sp. ScaeMP-e10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ScaeMP-e10	0.72 %
Streptomyces sp. G1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. G1	0.72 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.72 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.72 %
Saccharomonospora cyanea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora cyanea	0.72 %
Azospirillum sp. B510	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B510	0.72 %
Kutzneria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	0.72 %
Kribbella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	0.72 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.72 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.72 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559006\|FI_contig27384	All Organisms → cellular organisms → Bacteria → Terrabacteria group	565	Open in IMG/M
3300004091\|Ga0062387_101352600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. ScaeMP-e10	565	Open in IMG/M
3300005434\|Ga0070709_10025611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3487	Open in IMG/M
3300005434\|Ga0070709_10026683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3426	Open in IMG/M
3300005439\|Ga0070711_100103478	Not Available	2075	Open in IMG/M
3300005467\|Ga0070706_102043560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	519	Open in IMG/M
3300005518\|Ga0070699_101621142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	593	Open in IMG/M
3300005610\|Ga0070763_10057529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1866	Open in IMG/M
3300005615\|Ga0070702_100776213	Not Available	739	Open in IMG/M
3300005764\|Ga0066903_104416076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	751	Open in IMG/M
3300005843\|Ga0068860_101558124	Not Available	682	Open in IMG/M
3300006102\|Ga0075015_100222403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1013	Open in IMG/M
3300006173\|Ga0070716_100009315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4892	Open in IMG/M
3300006175\|Ga0070712_100096532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2176	Open in IMG/M
3300006196\|Ga0075422_10005476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3992	Open in IMG/M
3300006845\|Ga0075421_102284085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Azospirillum → unclassified Azospirillum → Azospirillum sp. B510	569	Open in IMG/M
3300006893\|Ga0073928_10249224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1358	Open in IMG/M
3300006903\|Ga0075426_11231236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	568	Open in IMG/M
3300006904\|Ga0075424_102213270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharomonospora → Saccharomonospora cyanea	578	Open in IMG/M
3300006969\|Ga0075419_10077362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2114	Open in IMG/M
3300007076\|Ga0075435_100214982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1631	Open in IMG/M
3300009094\|Ga0111539_12776810	Not Available	567	Open in IMG/M
3300009098\|Ga0105245_10521734	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1206	Open in IMG/M
3300009100\|Ga0075418_13026108	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300009147\|Ga0114129_10024388	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8570	Open in IMG/M
3300009551\|Ga0105238_10406022	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1356	Open in IMG/M
3300009553\|Ga0105249_13568265	Not Available	501	Open in IMG/M
3300010371\|Ga0134125_12120972	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300010375\|Ga0105239_12927616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	557	Open in IMG/M
3300010396\|Ga0134126_10679494	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1172	Open in IMG/M
3300010860\|Ga0126351_1015178	All Organisms → cellular organisms → Bacteria → Terrabacteria group	611	Open in IMG/M
3300010867\|Ga0126347_1083481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	905	Open in IMG/M
3300012210\|Ga0137378_10261685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1610	Open in IMG/M
3300012212\|Ga0150985_120716390	Not Available	551	Open in IMG/M
3300012487\|Ga0157321_1017042	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300012513\|Ga0157326_1013982	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300012924\|Ga0137413_10762380	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300012930\|Ga0137407_10569787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Kribbellaceae → Kribbella	1061	Open in IMG/M
3300012941\|Ga0162652_100054228	All Organisms → cellular organisms → Bacteria → Terrabacteria group	658	Open in IMG/M
3300012944\|Ga0137410_12003210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	515	Open in IMG/M
3300012960\|Ga0164301_11180055	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300012961\|Ga0164302_10871508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	688	Open in IMG/M
3300013104\|Ga0157370_11052620	Not Available	736	Open in IMG/M
3300013104\|Ga0157370_11339065	Not Available	645	Open in IMG/M
3300013104\|Ga0157370_11586946	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300013307\|Ga0157372_11037698	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300013307\|Ga0157372_13221870	All Organisms → cellular organisms → Bacteria → Terrabacteria group	520	Open in IMG/M
3300013308\|Ga0157375_13605470	All Organisms → cellular organisms → Bacteria → Terrabacteria group	515	Open in IMG/M
3300016371\|Ga0182034_11965167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WAC01280	517	Open in IMG/M
3300016422\|Ga0182039_10875020	All Organisms → cellular organisms → Bacteria → Terrabacteria group	801	Open in IMG/M
3300016445\|Ga0182038_11000922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WAC01280	740	Open in IMG/M
3300018075\|Ga0184632_10428284	All Organisms → cellular organisms → Bacteria → Terrabacteria group	551	Open in IMG/M
3300018076\|Ga0184609_10206015	All Organisms → cellular organisms → Bacteria → Terrabacteria group	917	Open in IMG/M
3300018465\|Ga0190269_11785994	All Organisms → cellular organisms → Bacteria → Terrabacteria group	524	Open in IMG/M
3300019767\|Ga0190267_10428879	All Organisms → cellular organisms → Bacteria	751	Open in IMG/M
3300019887\|Ga0193729_1227216	Not Available	613	Open in IMG/M
3300020579\|Ga0210407_10919704	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300021180\|Ga0210396_10086297	All Organisms → cellular organisms → Bacteria	2846	Open in IMG/M
3300021181\|Ga0210388_11120423	All Organisms → cellular organisms → Bacteria → Terrabacteria group	671	Open in IMG/M
3300021403\|Ga0210397_11166858	Not Available	599	Open in IMG/M
3300021404\|Ga0210389_10490810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	966	Open in IMG/M
3300021404\|Ga0210389_11007824	Not Available	646	Open in IMG/M
3300021404\|Ga0210389_11105691	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300021432\|Ga0210384_11079211	All Organisms → cellular organisms → Bacteria → Terrabacteria group	706	Open in IMG/M
3300021433\|Ga0210391_11502757	Not Available	516	Open in IMG/M
3300021478\|Ga0210402_11932545	Not Available	516	Open in IMG/M
3300025320\|Ga0209171_10259360	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300025912\|Ga0207707_10609134	Not Available	924	Open in IMG/M
3300025922\|Ga0207646_11608896	Not Available	560	Open in IMG/M
3300025927\|Ga0207687_10022244	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4217	Open in IMG/M
3300025927\|Ga0207687_11462073	Not Available	587	Open in IMG/M
3300026088\|Ga0207641_12300516	All Organisms → cellular organisms → Bacteria → Terrabacteria group	538	Open in IMG/M
3300026142\|Ga0207698_10571517	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1111	Open in IMG/M
3300026489\|Ga0257160_1077156	All Organisms → cellular organisms → Bacteria → Terrabacteria group	592	Open in IMG/M
3300027855\|Ga0209693_10338333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. G1	731	Open in IMG/M
3300027862\|Ga0209701_10041743	All Organisms → cellular organisms → Bacteria	2962	Open in IMG/M
3300028536\|Ga0137415_10503245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	1019	Open in IMG/M
3300028589\|Ga0247818_10914317	Not Available	617	Open in IMG/M
3300028828\|Ga0307312_10709332	Not Available	666	Open in IMG/M
3300031640\|Ga0318555_10204973	Not Available	1063	Open in IMG/M
3300031719\|Ga0306917_10625937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WAC01280	846	Open in IMG/M
3300031719\|Ga0306917_11013903	All Organisms → cellular organisms → Bacteria → Terrabacteria group	648	Open in IMG/M
3300031720\|Ga0307469_12102967	All Organisms → cellular organisms → Bacteria → Terrabacteria group	549	Open in IMG/M
3300031723\|Ga0318493_10319016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	841	Open in IMG/M
3300031740\|Ga0307468_101258608	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300031751\|Ga0318494_10024664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3023	Open in IMG/M
3300031764\|Ga0318535_10082334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1391	Open in IMG/M
3300031764\|Ga0318535_10145540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1055	Open in IMG/M
3300031765\|Ga0318554_10697140	All Organisms → cellular organisms → Bacteria → Terrabacteria group	570	Open in IMG/M
3300031769\|Ga0318526_10060263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1464	Open in IMG/M
3300031771\|Ga0318546_11224910	All Organisms → cellular organisms → Bacteria → Terrabacteria group	527	Open in IMG/M
3300031777\|Ga0318543_10135431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1076	Open in IMG/M
3300031779\|Ga0318566_10136983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1211	Open in IMG/M
3300031781\|Ga0318547_10256173	Not Available	1056	Open in IMG/M
3300031799\|Ga0318565_10060573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1773	Open in IMG/M
3300031832\|Ga0318499_10027913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2018	Open in IMG/M
3300031835\|Ga0318517_10144330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1062	Open in IMG/M
3300031835\|Ga0318517_10161784	All Organisms → cellular organisms → Bacteria	1003	Open in IMG/M
3300031894\|Ga0318522_10307994	Not Available	600	Open in IMG/M
3300031910\|Ga0306923_10930201	Not Available	950	Open in IMG/M
3300031945\|Ga0310913_11257539	Not Available	514	Open in IMG/M
3300031947\|Ga0310909_10513415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WAC01280	1004	Open in IMG/M
3300031954\|Ga0306926_12192375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. WAC01280	615	Open in IMG/M
3300031962\|Ga0307479_10879734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	869	Open in IMG/M
3300032008\|Ga0318562_10487790	Not Available	715	Open in IMG/M
3300032009\|Ga0318563_10035193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2522	Open in IMG/M
3300032041\|Ga0318549_10358006	Not Available	657	Open in IMG/M
3300032044\|Ga0318558_10461776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	633	Open in IMG/M
3300032059\|Ga0318533_10245430	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1292	Open in IMG/M
3300032063\|Ga0318504_10431023	Not Available	630	Open in IMG/M
3300032064\|Ga0318510_10130825	Not Available	978	Open in IMG/M
3300032065\|Ga0318513_10318930	All Organisms → cellular organisms → Bacteria → Terrabacteria group	755	Open in IMG/M
3300032066\|Ga0318514_10443238	Not Available	690	Open in IMG/M
3300032068\|Ga0318553_10117436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1365	Open in IMG/M
3300032076\|Ga0306924_10024321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	6480	Open in IMG/M
3300032094\|Ga0318540_10281862	All Organisms → cellular organisms → Bacteria → Terrabacteria group	802	Open in IMG/M
3300032261\|Ga0306920_100201971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2966	Open in IMG/M
3300032828\|Ga0335080_10735445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1025	Open in IMG/M
3300033158\|Ga0335077_10913327	Not Available	883	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.43%
Host-Associated	Host-Associated	19.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.09%
Plants	Host-Associated → Plants	19.57%
Aquatic	Environmental → Aquatic	4.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.22%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.35%
Sediment	Environmental → Aquatic → Sediment	2.17%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.45%
Freshwater	Environmental → Aquatic → Freshwater	0.72%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.22%
Loam	Environmental → Terrestrial → Soil → Loam	12.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.17%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.72%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.22%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.17%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.45%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.72%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.52%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.52%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.07%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.62%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.17%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.45%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.45%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.45%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.72%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.72%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.72%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559006	Grass soil microbial communities from Rothamsted Park, UK - FI (heavy metals 2g/kg) assembled	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010867	Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012487	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.4.old.130510	Host-Associated	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025320	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FI_00388150	2166559006	Grass Soil	LPKPGTPPPASIYDHALTVGFSRGFLVAAGIALLALLIAIATIRVRRQDLAGPRPAPDQGAASQPATVRQHQDRAALAAAGRPCRHC
Ga0062387_1013526001	3300004091	Bog Forest Soil	PLPKPGTAPPASIYDHALTVGFSRAFVVAAGIGLLALLIAIVTIRVRRQELAGAGPDPQEAAPQPAESQPVAPQPGTVQRHEDRAALAAAVRPCRLC*
Ga0066388_1001674091	3300005332	Tropical Forest Soil	AIAGGHQLAASPAQLTAHALATGFSRGFLVAAGITLLALLIALATIRVRRQDLIGTRPTPDQGTASQPVTAQQNQDRAALAAAGRPCRHC*
Ga0066388_1002909843	3300005332	Tropical Forest Soil	SPAELTAHALATGFSRGFLVAAGIGLLALLVGLATIRVRREELTGTGPAPQQDTGPQPAAARQQEDQAALAAAVRPCRHC*
Ga0070709_100256111	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	KAGQPLPKPGTPPPVSIYNHALTVGFSRAFEVAAGIALLALLIAIATIRVRRQELAGTAPEPQQAAPQHAAGQSAAPQPGIVQRHEDRAVLAAAVRPCRLC*
Ga0070709_100266833	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RTQVAHAAAAAAKAGQPLPKPGTPPPASIYDHALTVGFSRSFAVAAGIGLLALLIAIATIRIRRQELTGAVPAPQEAAPQPTTVQQQPTTMQQQPTTVQQHENRAALAAAVRPCRFC*
Ga0070711_1001034781	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	AVAAGIGLLALLIAIATIRIRRQELTGAVPAPQEAAPQPTTVQQQPTTMQQQPTTVQQHENRAALAAAVRPCRFC*
Ga0070706_1020435601	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VGFSRGFVVAAGIGLLALLIAIDTIRVSRQELAGAVPGPRETAPQPGTLERHEDQAALAAAVRPCRLR*
Ga0070699_1016211422	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VAAGIGLLALLIAIVTIRVRRQDLAGAAPASEEAAPQPAASQPGTVQPGTVQGDQDRAALAAAVRPCRLC*
Ga0066707_108532872	3300005556	Soil	VGASPAELTVHALATGFSRGFLVAAGIALLALLVALVTVRVRRQDLTGARPAPQEKAVSQPATVRQEHDRAALAAAVRPCRHC*
Ga0070763_100575294	3300005610	Soil	FSRAFLVAAGIGLLALLTAIATIRVRRQELAGAVPAPQEAAPQPAAQQPGTEQRQDDRTAVAAAARPCRLC*
Ga0070702_1007762132	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	ALTVGFSRAFEVAAGIALLALLIAIATIRVRRQELAGTAPEPQQAAPQHAAGQSAAPQPGIVQRHEDRAVLAAAVRPCRLC*
Ga0066903_1010030491	3300005764	Tropical Forest Soil	GRQPAASPAQLTAHALATGFSRGFLAAAGIGLLALLVAIATIRVRRQDLAGVQPTADQDTPRQPATVRQHQDRAALAAAGRPCRHC*
Ga0066903_1028780441	3300005764	Tropical Forest Soil	ASPAQVTAHALATGFSRGFLVAAGIGVLALLIAIATITLRRQDLAGTRPAPDQDTASQPATVQQHEDRAALAAAGRPCRHC*
Ga0066903_1044160761	3300005764	Tropical Forest Soil	ASIYDHALTVGFSRAFVVAAGIALLALLIAIVTIRVSRQELAGAVPESQEPAPQPAAPQPGTVQRHEDRAALAAAVRPCRLC*
Ga0068860_1015581242	3300005843	Switchgrass Rhizosphere	PASIYDHALTVGFSRAFLVAAGIALLALLIAIATIRVRRQELAGAAPEPQQAAVQPAAPQPGIVQRHEDRAVLAAAVRPCRLC*
Ga0075015_1002224033	3300006102	Watersheds	AAGGPGQSNTATAGQPLPKLGAPPPVSIYDHALTVGFSRGFAVAAGIALLALLIGIVTIRITRQELAGAAPEPQEAGPQPAALQPLAPQPGTVQQPEDQAILAAAARPCRLC*
Ga0070716_1000093153	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	AGQPLPKPGTPPPASIYDHALTVGFSRAFAVAAGIGLLALLIAIATIRIRRQELTGAVPAPQEAAPQPPTMQQQPTTVQQQPATVQQHEDRAALAAAARPCRFC*
Ga0070712_1000965321	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	KAGQPLPKPGTPPPASIYDHALTVGFSRAFAVAAGIGLLALLIAIATIRIRRQELTGAVPAPQEAAPQPPTMQQQPTTVQQQPATVQQHEDRAALAAAARPCRFC*
Ga0075422_100054763	3300006196	Populus Rhizosphere	LPKQGISPPASIYDHALAIGFSRVFLVSAGIALLALLVAIATIRVRRQELTGAAPPPQGAAPEPRTVQQHEDRAALAAAVRPCRFC*
Ga0075421_1022840851	3300006845	Populus Rhizosphere	VAAGIGLLGLLIAITTIRVTRQELSGAMPAPPETAPQPAVSQPVAQQPVTAQRQEDRAALAAAARPCRLC*
Ga0073928_102492241	3300006893	Iron-Sulfur Acid Spring	AGRPLPKPGTLPPASIYDHALTAGFSRAFLVAAGIGLLALLIAIVTIRVRRQELSGAVPEPQQAAPHPAAPQPATLQLHEDQVALAAAVRPGRLC*
Ga0075426_112312362	3300006903	Populus Rhizosphere	HALATGFSRGFLTAAGIALLALLIAIATIRVSRQEPTGAVPAPHEPAPQPATVQQHEDQAALAAAVRPCRFC*
Ga0075424_1022132701	3300006904	Populus Rhizosphere	SIYDHALTVGFSRAFVVAAGIALLALLIAIATIRVRRQELAGAATEPQPAAPQPAAPQPGTVQRHEDRAVLAAAVRPCRLC*
Ga0075419_100773622	3300006969	Populus Rhizosphere	LPKQGISPPTSIYDHALAIGFSRGFLVSAGIALLALLVAIATIRVRRQELTGAAPPPQGAAPEPGTVQQHEDRAALAAAVRPCRFC*
Ga0075435_1002149824	3300007076	Populus Rhizosphere	PPPASIYNHALTVGFSRGFVVAAGIALLALLIGIVTIRISRQELAGAVPEPQQAAPQPAAPQPVTVQQLEDRAALAAAARPCRLC*
Ga0111539_127768101	3300009094	Populus Rhizosphere	TGFSRGFLTAAGIALLALLIAIATIRVSRQELTGAMPAPHEAAPQPATMQQQEDRAALAAAVRPCRFC*
Ga0105245_105217342	3300009098	Miscanthus Rhizosphere	AKAGQPLPKPGTPPPVSIYNHALTVGFSRAFEVAAGIALLALLIAIATIRVRRQELAGTAPEPQQAAPQHAAGQSAAPQPGIVQRHEDRAVLAAAVRPCRLC*
Ga0075418_130261082	3300009100	Populus Rhizosphere	GIPPPASIYDHALAIGFSRGFLVSAGIALLALLIAIATIRVRRQELTGAVPAPQEAARQPGAVQQHEARAALAAAVSPCRFC*
Ga0114129_100243881	3300009147	Populus Rhizosphere	TIYYHALTVGFSRAFLVAAVIALLALLIAVATIRVRRQDLTGAVHVPHPATAQQPAAPQPATVQPAIVQKHEDRTALAAAARPCRMC*
Ga0105238_104060222	3300009551	Corn Rhizosphere	LPKPGTPPPVSIYNHALTVGFSRAFEVAAGIALLALLIAIATIRVRRQELAGTAPEPQQAAPQHAAGQSAAPQPGIVQRHEDRAVLAAAVRPCRLC*
Ga0105249_135682652	3300009553	Switchgrass Rhizosphere	HALATGFSRGFLTAAGIALLALLIAIATIRVSRQELTGAMPAPSEAAPQPATVQQHEDRAALAAAVRPCRFC*
Ga0126374_106885232	3300009792	Tropical Forest Soil	AGRQPAASPAELTTHALATGFSRGFLVAAGIGLLALLIGLATIRVRREELTGTGPAPQQVTGRQPAVVRQQEHQAAFAAAVRPCRHC*
Ga0126380_108075601	3300010043	Tropical Forest Soil	PAASPAELTAHALATGFSRGFLVAAGIGLLALLVGLATIRVRREELTGTGPAPQQVAGRQPAVARQQEDQAALAAAVRPCRHC*
Ga0126382_113393951	3300010047	Tropical Forest Soil	ALATGFSRGFLVAAGIGLLALLIAIATIRVRRQDLTGTRPAADQGAAAQPATVRQQDRAALAAASTPCRHC*
Ga0126373_101800964	3300010048	Tropical Forest Soil	SPAQVTAHALATGFSRGFLVAAGIGVLALLVALGTIRVRRQDLAGVQPTAEEDTARQPAPMQQHQDRAALAAAARPCRHC*
Ga0126376_114173911	3300010359	Tropical Forest Soil	GFSRGFLVAAGIALLALLVGLATIRLRRQDLTGTGPMPQEGTTREPATVRQHQDQAALAAAVRPCRHC*
Ga0126376_125779581	3300010359	Tropical Forest Soil	VHALATGFSRGFLVAAGIALLALLVALATIRVRRQDLAGTRPAPDQAAPDQAPADQPADLGQEQDRVALAAAAIPCRHC*
Ga0126372_124581932	3300010360	Tropical Forest Soil	HALATGFSRGFLVAAGIGVLALLIAIATITLRRQDLAGTRPAPDQDTASQPATVQQHEDRAALAAAGRPCRHC*
Ga0126379_136078151	3300010366	Tropical Forest Soil	QLATHALATGFSHGFLVAAGIALLALLVGLATIRLRRQDLTGTGPMPQEGTTREPATVRHHQDQAALAAAVRPCRHC*
Ga0134125_121209721	3300010371	Terrestrial Soil	TVGFSRAFAVAAGIGLLALLIAIATIRIRRQELTGAVPAPQEAAPQPPTVQQPPTTVQQHEDRAALAAAVRPCRFC*
Ga0105239_129276162	3300010375	Corn Rhizosphere	APVAVYDHALTVGFSRAFLVAAGIGLLALLIAIATIRVHREELSGEVPARQDAVPQPEAPLPATVPPNEDYAARAAAARPCRLC*
Ga0126381_1037015552	3300010376	Tropical Forest Soil	SPAELTVHALATGFSRGFLVAAGIALLALLVALATIRIRRQDLTGTRPAPDQPAANQPADLGQEQDRVALAAAAIPCRHC*
Ga0134126_106794941	3300010396	Terrestrial Soil	QPLPKPGTPPPVSIYNHALTVGFSRAFEVAAGIALLALLIAIATIRVRRQELAGTAPEPQQAAPQHAAGQSAAPQPGIVQRHEDRAVLAAAVRPCRLC*
Ga0126351_10151782	3300010860	Boreal Forest Soil	AATAAKAGLPLPKPGTPPPASIYDHALTVGFSRAFEVAAGIGLLALLIAIATIRVRRQELTGTVPEPQEAAPQPAPQPGTAQRPDDRTALAAAVRPCRLC*
Ga0126347_10834812	3300010867	Boreal Forest Soil	LHALTVGFSRGFLVAAGIGLLAVLIAIATIRIRRQDLSGDVPAPPEPAPQSETVQPETVQPETVQPHEERVALAAASRPCRFC*
Ga0137378_102616852	3300012210	Vadose Zone Soil	SRGFVVAAGIGLLALLIAIATIRVRRQELSGAVPAPQESAPQLAAPQPAASQPGTVQWHEDRAAVAAAARPCRLC*
Ga0137377_103034411	3300012211	Vadose Zone Soil	SPAQLTVHALTTGFSRGFLVAAGIALLALLVALATIRVRRQELTGARPAPQEKAAAGQPATVQEQGRVALAAAVRPCRHC*
Ga0150985_1207163901	3300012212	Avena Fatua Rhizosphere	ALATGFSRGFLTAAGIALLALLIAIATIRVSRQELTGAMPAPHEAAPQPATVQEQEDRAALAAAVRPCRFC*
Ga0137372_105413712	3300012350	Vadose Zone Soil	YHHALATGFARGFLAAAVIALIALIIALATIRIRREDLTGIRPAPQQGTVSQPAAARQHEDRAALAAAVRPCRPC*
Ga0157321_10170422	3300012487	Arabidopsis Rhizosphere	GISPPVSVYDHALAIGFSRGFLVSAGIALLALLIAIATIRVRRQELTGAVPPPQGAPPEPGTVQHHKDRAALAAAVRPCRFC*
Ga0157326_10139821	3300012513	Arabidopsis Rhizosphere	KPGIPQPASIYDHALAVGFSRGFLVSAGIALLALLVAIATIRVRRQELTGAVPAPQGAPAEPGTVQQHENRAALAAAVRPCRFC*
Ga0137413_107623801	3300012924	Vadose Zone Soil	IYDHALTVGFSRAFVLAAGIALLALFIAIATIRVSRQELTGVVPAPQEGVVPAPQEGAEPAPHETAPQSAAPQPGTEQRPEDRAALAAAARPCRLC*
Ga0137407_105697871	3300012930	Vadose Zone Soil	ALAVGFSSGFVVAAGIALLGLLIGIATIRVSRQELAGAVPAPQEPASRPAAPRPGTGQRHEDRAALAAAARPCRFC*
Ga0162652_1000542282	3300012941	Soil	PLPASIYDHALAVGFSRGFLVSAGIALLGLLVAIATIRVRRQDLTGAVPAPQEAAPQAATVQQHEDRAALAAAVRPCRFC*
Ga0137410_120032101	3300012944	Vadose Zone Soil	HALAVGFSRAFAVAAGIGLLALLIAIATIRVRRQDLSGDVPAPQGAEPQPAAQLPATEQRSEDLAARAAATRPCRLC*
Ga0164301_111800552	3300012960	Soil	DHALAIGFSRGFLVSAGIALLALLIAIATIRVRRQELAGAAPATQGPAPQPATVQLHQDRAALAAAVRPCRFC*
Ga0164302_108715081	3300012961	Soil	SATPPPAPIYYHALTVGFSRAFVVAAGIGLLALVIAIVTIRVRRQELTGAVPAPQEAAPQLAAVQQHEDRAALAAAARPCRFC*
Ga0164304_103643842	3300012986	Soil	PAQLAAHALATGFSRGFLTAAGIALLALLIAIATIRVSRRELTGEMPAPRDAAPPPETVQQHEDRAALAAAVRPCRFC*
Ga0157370_110526202	3300013104	Corn Rhizosphere	SRGFVVAAGIALLALLIGIVTIRISRQELAGAVPEPQQAAPQPAAPQPVTVQQLEDRAALAAAARPCRLC*
Ga0157370_113390652	3300013104	Corn Rhizosphere	SIYNHALTVGFSRAFEVAAGIALLALLIAIATIRVRRQELAGTAPEPQQAAPQHAAGQSAAPQPGIVQRHEDRAVLAAAVRPCRLC*
Ga0157370_115869461	3300013104	Corn Rhizosphere	PLPKQGISPPASIYGHALAIGFSRVFLVSVGIAQLALLVAIATIRVRRQELAGAVPATQGAAPQSATVQLHQDRAALAAAVRPCRLC*
Ga0157372_110376981	3300013307	Corn Rhizosphere	LTVGFSRAFAVAAGIGLLALLIAIATIRIRRQELTGAVPAPQRAAPEHGTVQHEDRAALAAAVRPCRLC*
Ga0157372_132218702	3300013307	Corn Rhizosphere	PKPGTPPPVSIYNHALTVGFSRAFEVAAGIALLALLIAIATIRVRRQELAGTAPEPQQAAPQHAAGQSAAPQPGIVQRHEDRAVLAAAVRPCRLC*
Ga0157375_136054702	3300013308	Miscanthus Rhizosphere	VSIYNHALTVGFSRAFEVAAGIALLALLIAIATIRVRRQELAGTAPEPQQAAPQHAAGQSAAPQPGIVQRHEDRAVLAAAVRPCRLC*
Ga0182041_102161001	3300016294	Soil	PAHLTAHALATGFSRGFRAPAVIALLALLVALATIRVRRQDLTGTRPAPDQAAPDQPADLGQEQDRAALAAAIPCRHC
Ga0182034_119651671	3300016371	Soil	VGFSRGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQEAAPQPAAPQPAAVQRHEDRAALAAAVRPCRLC
Ga0182039_108750202	3300016422	Soil	TSIYDHALTVGFSRGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQQAAPQPAAQQPGTVQRHEDRAALAVAVRPCRLC
Ga0182038_110009222	3300016445	Soil	ALLAVLIAIVTIRVSRQDLAGAVPEPQEAAPQPTAPQPAASQPATVQRHEDRAALAAAVRPRRLC
Ga0184632_104282842	3300018075	Groundwater Sediment	GQPLPKPGIPPPESIYDHALAVGFSRGFLVSAGIALLALLIAIATIRVRRQELTGAVPEPQEAAPQPATVQQHEDRAALAAAVRPCRLC
Ga0184609_102060151	3300018076	Groundwater Sediment	SIYDHALAVGFSRGFLVSAGIALLALLVAVATIRVRRQDLTGAVPAPQEAAPQAATVQQHEDRAALAAAVRPCRFC
Ga0190269_117859942	3300018465	Soil	RPASIYDHALAIGFSRGFLVSAGIALLALLVAIATIRVRRQELTGAVSPPQGAPPEPGTVQHHEDRAALAAAVRPCRFC
Ga0190267_104288791	3300019767	Soil	GIPPPASIYDHALAVGFSRGFLVSAGIALLALLIAIATIRVRRQELTGAMPVPQEAPPEPGTVQQHQDRAALAAAVRPCRFC
Ga0193729_12272161	3300019887	Soil	FVVAAGIGLLALLTAIATIRVRRQELSGAVPVPQEAAPQPAAPQPGTVQRHDDRAALAAAARPCRLC
Ga0210407_109197041	3300020579	Soil	FSRAFEVAAGIGLVALLIAIVAIRVSRRELAGAVPEPQGAALQAGTVQPATQQPETVQKQEDRAALAAAARPCRLC
Ga0210396_100862971	3300021180	Soil	VALRIAIATIRVRRQDLSGAAPAPQEAALQPAAEKPVAEEPAAQQPGTEEPHEDRTAVAAAARPCRLC
Ga0210388_111204231	3300021181	Soil	VFLVAAGIGLLALLIGIVTIRVRRQDLSGAVPAPQEAAPQPAAHQSAAQQPGTEQRHEDRTAVAAAARPCRLC
Ga0210397_111668581	3300021403	Soil	GFSRAFVVAAGIGLLALLIAIVTIRVRRQDLAGAAPEPEEAASQPAASQPGTVQPGAVQRDEDRAALAAAVRPCRLC
Ga0210389_104908102	3300021404	Soil	EVAAAIALLALLIAIATIRVRRQELTGAVPEPQEASPQPAAPQPGTAQRQQERAGRAAAARPARLC
Ga0210389_110078241	3300021404	Soil	REGGRPLPKPGAPPPASIYLHALTVGISRGFVVAAGIALLALLIAIVTIQVSRQELAAAVPEPQEPAPQPGTRERHEDQAALASAVRPCRLC
Ga0210389_111056912	3300021404	Soil	TQVAHAAKAGRPLPKPGTPPPASIYDHALAVGFPRGFVVAAGIALLALLIAFATIRVRRQELTGAVPEPQETAPQPTAPQPGTVQPGTVQQHEDRAALAAAARPCRLC
Ga0210384_110792111	3300021432	Soil	GTLPPASIYDHALTVGFSRGFLVAAGIGLLALLIAIATIRVRRQELSGAVPAPQEPAPQPAASLPGTAQRHEDQAALAAAARPCRFC
Ga0210391_115027571	3300021433	Soil	FSRAFLVAAGIGLLALLIAIVTIRVRRQDLAGAAPEPEEAASQPAASQPGTVQPGAVQRDEDRAALAAAVRPCRLC
Ga0210402_119325451	3300021478	Soil	PGTLPPASIYYHALTVGFSRAFLVAAGIGLLALLIAIVTIRVRRQDLAGAAPEPEEAASQPAASQPGTVQPGTVQPVAVQRDEDRAALAAAVRPCRLC
Ga0209171_102593601	3300025320	Iron-Sulfur Acid Spring	GTLPPASIYDHALTAGFSRAFLVAAGIGLLALLIAIVTIRVRRQELSGAVPEPQQAAPHPAAPQPATLQLHEDQVALAAAVRPGRLC
Ga0207707_106091341	3300025912	Corn Rhizosphere	AFAVAAGIGLLALLIAIATIRIRRQELTGAVPAPQEAAPQPTTVQQQPTTMQQQPTTVQQHENRAALAAAVRPCRFC
Ga0207646_116088961	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	TPPPVSIYNHALTVGFSRAFEVAAGIALLALLIAIATIRVRRQELAGTAPEPQQAAPQHAAGQSAAPQPGIVQRHEDRAVLAAAVRPCRLC
Ga0207687_100222442	3300025927	Miscanthus Rhizosphere	LPKPGTPPPVSIYNHALTVGFSRAFEVAAGIALLAMLIAIATIRVRRQELAGTAPEPQQAAPQHAAGQSAAPQPGIVQRHEDRAVLAAAVRPCRLC
Ga0207687_114620731	3300025927	Miscanthus Rhizosphere	LPKQGISPPASIYGHALAIGFSRVFLVSAGIAQLALLVAIATIRVRRQELTGAAPPPQGAAPEPRTVQQHEDRAALAAAVRPCRFC
Ga0207641_123005161	3300026088	Switchgrass Rhizosphere	KPGTPPPVSIYNHALTVGFSRAFEVAAGIALLALLIAIATIRVRRQELAGTAPEPQQAAPQHAAGQSAAPQPGIVQRHEDRAVLAAAVRPCRLC
Ga0207698_105715171	3300026142	Corn Rhizosphere	PKPGTPPPVSIYNHALTVGFSRAFEVAAGIALLALLIAIATIRVRRQELAGTAPEPQQAAPQHAAGQSAAPQPGIVQRHEDRAVLAAAVRPCRLC
Ga0257160_10771561	3300026489	Soil	AAAAAKAGRPVPKPGTPPPASIYDHALTVGFPRGFFVAAGIGLLALLIGIVTIRVRRQELAGAALEPQEAVPQPAVPQEAVPQPAAPQPGTVQRHEDRAALAAAARPCRFC
Ga0209693_103383332	3300027855	Soil	FVVAAGIGLLALLIAIATIRVRRHELSGAVPAPQEAAPQPAAPQPTALQPRTEQRYEDQAARAAAARPCRFC
Ga0209701_100417434	3300027862	Vadose Zone Soil	VGFSRGFVVAAGIGLLALLIAIATIRVGRQELSGAVPAPQEPAPQPAASQPGTAQRHEDRAALAAAARPCRFC
Ga0137415_105032452	3300028536	Vadose Zone Soil	AANAGGAVPASVYNHALAVGFSRGFDVAAGVSLLALLIALATIRVRRRELTGAVPEPPSAVPQPEDRIALAKAVRPCRLC
Ga0247818_109143172	3300028589	Soil	IPTYVHLRSRPGDRLSRGFLVSAGIALLALLVAIATIRVRRQELTGAAPPPQGAAPEPGTVQQHEDRAALAAAVRPCQFC
Ga0307312_107093321	3300028828	Soil	GTPPPASIYDHALTAGFPRAFAVAAGIALLAMFIAIATIRVRRQDLSGAVPAPQQAAPQPGTEQRHEDQTALAAAARPCRLC
Ga0318555_102049732	3300031640	Soil	VRTQVAAAAKAGRPLPKPGAPLPASIYNHALTVGFSRGFVVAAGIALLALLIGILTIRISRQELAGAVPEPQQAAPQPAASQPGTVQLHEDRAALAATVRPCRLC
Ga0306917_106259372	3300031719	Soil	KPGTPPPASIYNHALTVGFSRGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQEAAPQPAAPQPAAVQRHEDRAALAAAVRPCRLC
Ga0306917_110139032	3300031719	Soil	PPPASIYDHALTVGFSRGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQQAAPQPAAPQPAAQQPGTVQRHEDRAALAAAVRPCRLC
Ga0307469_121029672	3300031720	Hardwood Forest Soil	PPPASIYDHALAIGFSRGFLVSAGIALLALLVAIATIRVRRQELTGAVPAPQEAAPQPTTVQQQPTTMQQQPTTVQQHENRAALAAAVRPCRFC
Ga0318493_103190162	3300031723	Soil	VVAAGIALLALLIGIVTIRVSRQELAGAVPEPQQAAPQPAAPQPAAQQPGTVQRHEDRAALAAAVRPCRLC
Ga0307468_1012586082	3300031740	Hardwood Forest Soil	PPPASIYDHALAIGFSRGFLVSAGIALLALLIAIATVRVRRQELTGAVPAPQGAAPEPGTVQQHKDRAALAAAVRPCRFC
Ga0318494_100246641	3300031751	Soil	IYNHALTVGFSRGFMVAAGIALLALLIGIVTIRVSRQELAGAVPEPQEAAPQPAAPQPAAVQRHEDRAALAAAVRPCRLC
Ga0318535_100823341	3300031764	Soil	IYNHALTVGFSRGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQEAAPQPAAPQPAAVQRHEDRAALAAAVRPCRLC
Ga0318535_101455401	3300031764	Soil	PTSIYDHALTVGFSRGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQQAAPQPAAQQPGTVQRHEDRAALAVAVRPCRLC
Ga0318554_106971402	3300031765	Soil	PPPASIYDHALTVGFSRGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQQAAPQPAAQQPGTVQRHEDRAALAVAVRPCRLC
Ga0318526_100602633	3300031769	Soil	LPKPGTPPPASIYDHALTVGFSRGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQAAVPQPAAPQPAAVQRHEDRAALAAAVRPCRLC
Ga0318546_112249101	3300031771	Soil	LRTQVAHAAAAAAKAGRPLPKPGTPPPTSIYDHALTVGFSRGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQQAAPQPAAQQPGTVQRHEDRAALAVAVRPCRLC
Ga0318543_101354313	3300031777	Soil	FVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQEAAPQPAAPQPAAVQRHEDRAALAAAVRPRRLC
Ga0318566_101369831	3300031779	Soil	LTVGFSRGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQEAAPQPAAPQPAAVQRHEDRAALAAAVRPCRLC
Ga0318547_102561731	3300031781	Soil	ASIYNHALTVGFSRGFVVAAGIALLALLIGILTIRISRQELAGAVPEPQQAAPQPAASQPGTVQLHEDRAALAATVRPCRLC
Ga0318565_100605731	3300031799	Soil	GRPLPKPGTPPPASIYDHALTVGFSRGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQQAAPQPAAQQPGTVQRHEDRAALAAAVRPCRLC
Ga0318499_100279131	3300031832	Soil	GFSRGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQEAAPQPAAPQPAAVQRHEDRAALAAAVRPCRLC
Ga0318517_101443303	3300031835	Soil	IYNHALTVGFSRGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQEAAPQPAAPQPAAVQRHEDRAALAAAVRPRRLC
Ga0318517_101617841	3300031835	Soil	FVVAAGIALLALLIGILTIRISRQELAGAVPEPQQAAPQPAASQPGTVQLHEDRAALAATVRPCRLC
Ga0318522_103079942	3300031894	Soil	WPKPGAPLPASIYNHALTVGFSRGFVVAAGIALLALLIGILTIRISRQELAGAVPEPQQAAPQPAASQPGTVQLHEDRAALAATVRPCRLC
Ga0306923_109302011	3300031910	Soil	VAAAAKAGRPLPKPGAPLPASIYNHALTVGFSRGFVVAAGIALLALLIGILTIRISRQELAGAVPEPQQAAPQPAASQPGTVQLHEDRAALAATVRPCRLC
Ga0310913_112575391	3300031945	Soil	SIYNHALTVGFSRGFAVAAGIALLALLIAIVTIRISRQELAGAVPEPRQVAPQPAAPRPGTVPRQEDRAALAAAARPCRFC
Ga0310909_105134151	3300031947	Soil	AAAKAGRPLPKPGTPPPASIYNHALTVGFSRGFMVAAGIALLALLIGIVTIRVSRQELAGAVPEPQEAAPQPAAPQPAAVQRHEDRAALAAAVRPCRLC
Ga0306926_121923751	3300031954	Soil	TVGFSRGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQEAAPQPAAPQPAAVQRHEDRAALAAAVRPRRLC
Ga0307479_108797341	3300031962	Hardwood Forest Soil	YDHALAVGISRAFVVAAGVALLALLIAIVTIRVSRQDLADAGPEPQEPAPQPATVQQQDDQAALAAAARPCRLC
Ga0318562_104877902	3300032008	Soil	ALTVGFSRGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQQAAPQPAAQQPGTVQRHEDRAALAVAVRPCRLC
Ga0318563_100351931	3300032009	Soil	FVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQEAAPQPAAPQPAAVQRHEDRAALAAAVRPCRLC
Ga0318549_103580061	3300032041	Soil	SVRTQVAAAAKAGRPLPKPGAPLPASIYNHALTVGFSRGFVVAAGIALLALLIGILTIRISRQELAGAVPEPQQAAPQPAASQPGTVQLHEDRAALAATVRPCRLC
Ga0318558_104617761	3300032044	Soil	SRAFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQEAAPQPAAPQPGTVQRQEDRASLAAAARPCRLC
Ga0318533_102454301	3300032059	Soil	YDHALTVGFSRGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQEAAPQPAAPQPAVQQPEDQAVLAAAARPCRLC
Ga0318504_104310231	3300032063	Soil	RGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQQAAPQPAAPQPAAQQPGTVQRHEDRAALAVAVRPCRLC
Ga0318510_101308251	3300032064	Soil	IYNHALTVGFSRGFVVAAGIALLALLIGILTIRISRQELAGAVPEPQQAAPQPAASQPGTVQLHEDRAALAATVRPCRLC
Ga0318513_100621403	3300032065	Soil	PAELTVHALATGFSRGFLVAAGIALLALLVALATIRVRRQDLAGIRPAPDQAAADQPADLGQEQDRVALAAAAIPCRHC
Ga0318513_103189301	3300032065	Soil	NSVRTQVAAAAKAGRPLPKPGTPPPTSIYDHALTVGFSRGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQQAAPQPAAQQPGTVQRHEDRAALAVAVRPCRLC
Ga0318514_104432381	3300032066	Soil	YNHALTVGFSRGFAVAAGIALLALLIGIVTIRISRQELAGAVPEPQQVAPQPAASSQPAAPRPGTVQRHEDRAALAAAVRPCRFC
Ga0318553_101174363	3300032068	Soil	HALTVGFSRGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQEAAPQPAAPQPAAVQRHEDRAALAAAVRPCRLC
Ga0306924_100243219	3300032076	Soil	GVPRGGGRGRRAARRLLIGIVTIRISRQELAGAAPEPQEAAPKEAAPQPAAPQPATVQQHEDRAALAAAVRPCRLC
Ga0318540_102818622	3300032094	Soil	ALLGTVAWTAAAKAGRPLPKPGTPPPASIYDHALTVGFSRGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQQAAPQPAAQQPGTVQRHEDRAALAVAVRPCRLC
Ga0306920_1002019714	3300032261	Soil	ASIYNHALTVGFSRGFVVAAGIALLALLIGIVTIRVSRQELAGAVPEPQEAAPQPAAPQPAAVQRHEDRAALAAAVRPCRLC
Ga0335080_107354451	3300032828	Soil	IYDHALTVGFSRAFVVAAGIGLLALLIAVATIRVRRQELSGAVPAPQEAASQPATVQQHEDRAALAATARPCRFC
Ga0335077_109133272	3300033158	Soil	PGTAPPASIYNHALTVGFSRAFDVAAGIGLLALLIGIVTIRVSRQELAAAVPEPQAAAPQPATLERHEDQAALASAVRPCWLC

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056013

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences