NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F056092

Metagenome / Metatranscriptome Family F056092

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F056092
Family Type Metagenome / Metatranscriptome
Number of Sequences 138
Average Sequence Length 44 residues
Representative Sequence SAATEQQIASLGELTTTSQHLSVAAAKLSETIQRFNVNGKA
Number of Associated Samples 112
Number of Associated Scaffolds 137

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.74 %
% of genes near scaffold ends (potentially truncated) 95.65 %
% of genes from short scaffolds (< 2000 bps) 78.99 %
Associated GOLD sequencing projects 102
AlphaFold2 3D model prediction Yes
3D model pTM-score0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (77.536 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(27.536 % of family members)
Environment Ontology (ENVO) Unclassified
(63.768 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(69.565 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 56.52%    β-sheet: 0.00%    Coil/Unstructured: 43.48%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.61
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 137 Family Scaffolds
PF02678Pirin 15.33
PF01979Amidohydro_1 12.41
PF13442Cytochrome_CBB3 6.57
PF05726Pirin_C 5.84
PF00210Ferritin 4.38
PF00196GerE 2.19
PF14417MEDS 2.19
PF08281Sigma70_r4_2 1.46
PF04542Sigma70_r2 1.46
PF00135COesterase 1.46
PF00033Cytochrome_B 0.73
PF01292Ni_hydr_CYTB 0.73
PF00174Oxidored_molyb 0.73
PF00080Sod_Cu 0.73
PF00005ABC_tran 0.73
PF12102MrcB_N 0.73
PF12704MacB_PCD 0.73
PF00015MCPsignal 0.73
PF03466LysR_substrate 0.73

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 137 Family Scaffolds
COG1741Redox-sensitive bicupin YhaK, pirin superfamilyGeneral function prediction only [R] 21.17
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 1.46
COG0840Methyl-accepting chemotaxis protein (MCP)Signal transduction mechanisms [T] 1.46
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 1.46
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 1.46
COG2272Carboxylesterase type BLipid transport and metabolism [I] 1.46
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 1.46
COG1290Cytochrome b subunit of the bc complexEnergy production and conversion [C] 0.73
COG1969Ni,Fe-hydrogenase I cytochrome b subunitEnergy production and conversion [C] 0.73
COG2032Cu/Zn superoxide dismutaseInorganic ion transport and metabolism [P] 0.73
COG2041Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductasesEnergy production and conversion [C] 0.73
COG2864Cytochrome b subunit of formate dehydrogenaseEnergy production and conversion [C] 0.73
COG3038Cytochrome b561Energy production and conversion [C] 0.73
COG3658Cytochrome b subunit of Ni2+-dependent hydrogenaseEnergy production and conversion [C] 0.73
COG3915Uncharacterized conserved proteinFunction unknown [S] 0.73
COG4117Thiosulfate reductase cytochrome b subunitInorganic ion transport and metabolism [P] 0.73

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms77.54 %
UnclassifiedrootN/A22.46 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001661|JGI12053J15887_10060301All Organisms → cellular organisms → Bacteria2109Open in IMG/M
3300002560|JGI25383J37093_10101897All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium837Open in IMG/M
3300002560|JGI25383J37093_10101897All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium837Open in IMG/M
3300002560|JGI25383J37093_10106233All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300002560|JGI25383J37093_10208958All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300002561|JGI25384J37096_10003048All Organisms → cellular organisms → Bacteria5884Open in IMG/M
3300002562|JGI25382J37095_10004128All Organisms → cellular organisms → Bacteria4996Open in IMG/M
3300002562|JGI25382J37095_10272330All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300005171|Ga0066677_10567880All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300005172|Ga0066683_10452139All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium787Open in IMG/M
3300005174|Ga0066680_10061978All Organisms → cellular organisms → Bacteria2223Open in IMG/M
3300005174|Ga0066680_10265552All Organisms → cellular organisms → Bacteria1092Open in IMG/M
3300005177|Ga0066690_10122147All Organisms → cellular organisms → Bacteria1692Open in IMG/M
3300005178|Ga0066688_10516417All Organisms → cellular organisms → Bacteria768Open in IMG/M
3300005178|Ga0066688_11026920All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300005179|Ga0066684_10362604All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium970Open in IMG/M
3300005179|Ga0066684_11109809All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium505Open in IMG/M
3300005180|Ga0066685_10090983All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2026Open in IMG/M
3300005180|Ga0066685_11008615Not Available549Open in IMG/M
3300005186|Ga0066676_11065314All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300005187|Ga0066675_10531009All Organisms → cellular organisms → Bacteria881Open in IMG/M
3300005440|Ga0070705_101300926All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300005444|Ga0070694_101906883All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300005446|Ga0066686_10725415All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300005536|Ga0070697_100036996All Organisms → cellular organisms → Bacteria3943Open in IMG/M
3300005553|Ga0066695_10783568All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300005554|Ga0066661_10935922Not Available507Open in IMG/M
3300005558|Ga0066698_10465098All Organisms → cellular organisms → Bacteria861Open in IMG/M
3300005560|Ga0066670_10161832All Organisms → cellular organisms → Bacteria1317Open in IMG/M
3300005574|Ga0066694_10578715All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium523Open in IMG/M
3300005586|Ga0066691_10599112All Organisms → cellular organisms → Bacteria655Open in IMG/M
3300005586|Ga0066691_10818090Not Available549Open in IMG/M
3300005587|Ga0066654_10531277All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300005598|Ga0066706_10124462All Organisms → cellular organisms → Bacteria1907Open in IMG/M
3300006031|Ga0066651_10051829All Organisms → cellular organisms → Bacteria1923Open in IMG/M
3300006163|Ga0070715_10872185All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300006796|Ga0066665_11426703All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300006796|Ga0066665_11681149All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300006797|Ga0066659_11210194All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300006804|Ga0079221_10059346All Organisms → cellular organisms → Bacteria1746Open in IMG/M
3300006847|Ga0075431_101107784All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300006854|Ga0075425_100084501All Organisms → cellular organisms → Bacteria3592Open in IMG/M
3300006914|Ga0075436_100047486All Organisms → cellular organisms → Bacteria2961Open in IMG/M
3300009012|Ga0066710_102309427All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium782Open in IMG/M
3300009012|Ga0066710_104797501All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium 13_2_20CM_70_9506Open in IMG/M
3300009038|Ga0099829_10103710Not Available2216Open in IMG/M
3300009089|Ga0099828_11996129All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium507Open in IMG/M
3300009089|Ga0099828_12000882All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium507Open in IMG/M
3300009090|Ga0099827_10043361All Organisms → cellular organisms → Bacteria3342Open in IMG/M
3300009137|Ga0066709_102996915Not Available620Open in IMG/M
3300009143|Ga0099792_10852515Not Available600Open in IMG/M
3300009147|Ga0114129_11913343All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300010085|Ga0127445_1045427Not Available747Open in IMG/M
3300010117|Ga0127449_1114416Not Available570Open in IMG/M
3300010124|Ga0127498_1154784All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300010301|Ga0134070_10022135All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2073Open in IMG/M
3300010304|Ga0134088_10027446All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2552Open in IMG/M
3300010304|Ga0134088_10364828Not Available702Open in IMG/M
3300010320|Ga0134109_10385959All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300010321|Ga0134067_10068554All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1170Open in IMG/M
3300010321|Ga0134067_10300324All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium619Open in IMG/M
3300010335|Ga0134063_10003826All Organisms → cellular organisms → Bacteria5471Open in IMG/M
3300010335|Ga0134063_10012889All Organisms → cellular organisms → Bacteria3315Open in IMG/M
3300010335|Ga0134063_10519782All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium598Open in IMG/M
3300010336|Ga0134071_10048246All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1924Open in IMG/M
3300010336|Ga0134071_10052387All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1854Open in IMG/M
3300010364|Ga0134066_10138327All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium752Open in IMG/M
3300010396|Ga0134126_10838341Not Available1037Open in IMG/M
3300011269|Ga0137392_10119114Not Available2103Open in IMG/M
3300011270|Ga0137391_10475668All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1060Open in IMG/M
3300011414|Ga0137442_1130660All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300012199|Ga0137383_11029328All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium599Open in IMG/M
3300012201|Ga0137365_10092006All Organisms → cellular organisms → Bacteria2284Open in IMG/M
3300012201|Ga0137365_10579040All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium823Open in IMG/M
3300012203|Ga0137399_11650535Not Available529Open in IMG/M
3300012204|Ga0137374_11099840All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium566Open in IMG/M
3300012349|Ga0137387_10089120All Organisms → cellular organisms → Bacteria → Proteobacteria2134Open in IMG/M
3300012353|Ga0137367_10602145All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium769Open in IMG/M
3300012357|Ga0137384_10789138All Organisms → cellular organisms → Bacteria → Proteobacteria768Open in IMG/M
3300012359|Ga0137385_11560010All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes524Open in IMG/M
3300012360|Ga0137375_10517926All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1011Open in IMG/M
3300012362|Ga0137361_11521279All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium591Open in IMG/M
3300012363|Ga0137390_10478445All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1220Open in IMG/M
3300012376|Ga0134032_1131932Not Available634Open in IMG/M
3300012407|Ga0134050_1377285Not Available611Open in IMG/M
3300012685|Ga0137397_10835479Not Available683Open in IMG/M
3300012917|Ga0137395_10992054All Organisms → cellular organisms → Bacteria602Open in IMG/M
3300012918|Ga0137396_10088552All Organisms → cellular organisms → Bacteria2193Open in IMG/M
3300012922|Ga0137394_10144308Not Available2023Open in IMG/M
3300012925|Ga0137419_10488156All Organisms → cellular organisms → Bacteria976Open in IMG/M
3300012929|Ga0137404_10814773Not Available848Open in IMG/M
3300012930|Ga0137407_11192747All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300012972|Ga0134077_10479341All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes548Open in IMG/M
3300012976|Ga0134076_10479519All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300014154|Ga0134075_10175673All Organisms → cellular organisms → Bacteria919Open in IMG/M
3300014154|Ga0134075_10301071All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium698Open in IMG/M
3300014157|Ga0134078_10502980Not Available564Open in IMG/M
3300015359|Ga0134085_10396420All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium619Open in IMG/M
3300017656|Ga0134112_10035352All Organisms → cellular organisms → Bacteria1774Open in IMG/M
3300017656|Ga0134112_10068795Not Available1303Open in IMG/M
3300017656|Ga0134112_10110440Not Available1038Open in IMG/M
3300017657|Ga0134074_1029045All Organisms → cellular organisms → Bacteria1842Open in IMG/M
3300018431|Ga0066655_10724878All Organisms → cellular organisms → Bacteria674Open in IMG/M
3300018433|Ga0066667_10844370All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300018468|Ga0066662_10781836Not Available923Open in IMG/M
3300018482|Ga0066669_11614356All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300018482|Ga0066669_12032805All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300025905|Ga0207685_10248550Not Available859Open in IMG/M
3300025905|Ga0207685_10367066All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae730Open in IMG/M
3300026277|Ga0209350_1034270All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1506Open in IMG/M
3300026296|Ga0209235_1000208All Organisms → cellular organisms → Bacteria28233Open in IMG/M
3300026296|Ga0209235_1208294Not Available656Open in IMG/M
3300026296|Ga0209235_1259946All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium534Open in IMG/M
3300026297|Ga0209237_1159638Not Available847Open in IMG/M
3300026301|Ga0209238_1017369All Organisms → cellular organisms → Bacteria2772Open in IMG/M
3300026313|Ga0209761_1152290All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1089Open in IMG/M
3300026317|Ga0209154_1286222All Organisms → cellular organisms → Bacteria547Open in IMG/M
3300026318|Ga0209471_1010597All Organisms → cellular organisms → Bacteria4825Open in IMG/M
3300026324|Ga0209470_1020713All Organisms → cellular organisms → Bacteria3556Open in IMG/M
3300026325|Ga0209152_10239014All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium676Open in IMG/M
3300026330|Ga0209473_1004939All Organisms → cellular organisms → Bacteria7067Open in IMG/M
3300026331|Ga0209267_1005004All Organisms → cellular organisms → Bacteria7950Open in IMG/M
3300026334|Ga0209377_1256014All Organisms → cellular organisms → Bacteria576Open in IMG/M
3300026538|Ga0209056_10007563All Organisms → cellular organisms → Bacteria11183Open in IMG/M
3300026540|Ga0209376_1094479All Organisms → cellular organisms → Bacteria1549Open in IMG/M
3300026542|Ga0209805_1112263All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1294Open in IMG/M
3300027181|Ga0208997_1065332Not Available544Open in IMG/M
3300027383|Ga0209213_1042325Not Available861Open in IMG/M
3300027882|Ga0209590_10803988All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium597Open in IMG/M
3300027886|Ga0209486_10921804All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300028065|Ga0247685_1042273All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium560Open in IMG/M
3300028536|Ga0137415_10400200Not Available1177Open in IMG/M
3300031152|Ga0307501_10037021Not Available1032Open in IMG/M
3300031720|Ga0307469_11028966All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium770Open in IMG/M
3300031962|Ga0307479_12091194All Organisms → cellular organisms → Bacteria514Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil27.54%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil20.29%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil20.29%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil15.94%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.35%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.90%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.17%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.45%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.45%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.72%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.72%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.72%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cmEnvironmentalOpen in IMG/M
3300002561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300010085Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010117Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010124Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011414Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012376Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012407Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026318Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300027181Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027383Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027886Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)EnvironmentalOpen in IMG/M
3300028065Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12053J15887_1006030113300001661Forest SoilAQGAEQTSAATEEQIASLGELTTTSQHLSVAAAKLTETIQRFNVNGKG*
JGI25383J37093_1010189723300002560Grasslands SoilVAGIADSAAHGAEQTSGATELQIASLGDLTTTEQHLSVAAAKLTETIQRFTVDGKA*
JGI25383J37093_1010189733300002560Grasslands SoilLGELTTTSQQLSVAAARLTETIQRFNVNGAKLPPRNSPASP*
JGI25383J37093_1010623313300002560Grasslands SoilAATEQQIASLGELTMTSQHLSVAAAKLSETIQRFNVNGKA*
JGI25383J37093_1020895823300002560Grasslands SoilSAAQGAEQTSAATAEQIASLDELTTTSQQLSAAATKLTETIQRFNVNGKA*
JGI25384J37096_1000304843300002561Grasslands SoilMEEVAGIADSAAHGAEQTSGATELQIASLGDLTTTEQHLSVAAAKLTETIQRFTVDGKA*
JGI25382J37095_1000412813300002562Grasslands SoilQGAEQTSAATEEQIASLGELTTTSQHLSVAAAKLTETIQRFNVNGKA*
JGI25382J37095_1027233013300002562Grasslands SoilTGARQTSAATAQQIASLGELTTTSQHLSDAAATLSQTIRRFRVKGNGL*
Ga0066677_1056788023300005171SoilEVAGIADSAAQGAEQTSAVTEQQIASLGELTTTSQHLSVAAARLTETMQRFTLNGKA*
Ga0066683_1045213933300005172SoilATEQQIASLSELTTTTQHLSVAAAKLTETIERFNVNGKAGRSA*
Ga0066680_1006197833300005174SoilAATEEQIASLGELTTTSQHLSVAAAKLTETIQRFRVNGKS*
Ga0066680_1026555213300005174SoilAATEQQIASLSELTTTTQHLSVAAAKLTETIERFNVNGKE*
Ga0066690_1012214733300005177SoilAAQGAEQTSAATEQQIASLGELTTTSQHLSVAAARLTETMQRFNVNGKA*
Ga0066688_1051641713300005178SoilAETAAQGAERTSAATEQQIASLGELTTTSQQLAVAAAKLTETIQQFNVNGASLPTPE*
Ga0066688_1102692023300005178SoilAATAQQIAALDELTTTSQQLSAAAAKLTETIQRFVVNGKA*
Ga0066684_1036260413300005179SoilERQIASLGELTTTSQQLAVAAARLTETMQRFNVNGASLPAPE*
Ga0066684_1110980913300005179SoilERQIASLGELTTTSQQLAVAAARLTETMQRFNVNGASLPASE*
Ga0066685_1009098333300005180SoilTAAQGAEQTSAATEEQIASLGELTTTSQHLSVAAAKLTETIRRFTVNGKP*
Ga0066685_1100861523300005180SoilAATEQQIASLSELTTTTQHLSVAAAKLTETIERFNVNGKAGRSA*
Ga0066676_1106531413300005186SoilAEQTSAATEEQIASLGELTTTSQHLSVAAAKLTETIQRFNVNGKA*
Ga0066675_1053100923300005187SoilATEQQIASLGELTTTSQQLAVAAAKLTETIQQFNVNGASLPTPE*
Ga0070705_10130092613300005440Corn, Switchgrass And Miscanthus RhizosphereGAQQTSAATEEQIASLGELTATSQHLSNAAAKLTQTIQRFTVNGAGASH*
Ga0070694_10190688313300005444Corn, Switchgrass And Miscanthus RhizosphereSAATSEQIASLGELTATSQHLSNAAAKLAETIQRFTVNGAGGPVH*
Ga0066686_1072541533300005446SoilAATEQQIASLSELTTTTQHLSVAAAKLTETIERFNVNGKA*
Ga0070697_10003699653300005536Corn, Switchgrass And Miscanthus RhizosphereAAQGAEQTSAATEEQIASLGELTTTSQHLSVAAAKLTETIQRFNVNGKG*
Ga0066695_1078356813300005553SoilQQTSAATAQQIVSLSELTTTSQQLSDAAAALARTIQRFRSD*
Ga0066661_1093592213300005554SoilFGELTTTSQHLSVAAAKLSETIQRFHVNGEGSDSPAPQ*
Ga0066707_1000648613300005556SoilSLGELTTTSQHLSVAAARLTETMQRFNVNGLATARGR*
Ga0066698_1046509813300005558SoilTAAQGAEQTSAATEQQIASLGELTMTSQHLSVAAAKLSETIQRFNVNGKA*
Ga0066700_1051535123300005559SoilAGIAETAAQGAEQTSAATAQQIASLSELTTTTQHLSVAAAKLTETIEHFTVNGKA*
Ga0066670_1016183233300005560SoilAERTSAATEQQIASLGELTTTSQQLAVAAAKLTETIQQFNVNGASLPTPE*
Ga0066694_1057871523300005574SoilQIASLGELTTTSQQLAVAAAKLTETIQQFNVNGASLPTPE*
Ga0066691_1059911223300005586SoilSSFGELTTTSQHLSVAAAKLSETIQRFHVNGEGAASPPVQ*
Ga0066691_1081809023300005586SoilQQIASLGELTTTSQHLSVAAAKLTETTQRFNVNGTA*
Ga0066654_1053127723300005587SoilQMEEVAGIADSAAQGAEQTSAVTEQQIASLGELTTTSQHLSVAAARLTETMQRFTLNGKA
Ga0066706_1012446213300005598SoilAERTSAATEQQIASLGELTTTSQQLAVAAAKLTQTIHQFNVNGASLPTPE*
Ga0066651_1005182933300006031SoilTAQQIASLNALTATSQHISDAAATLSETIQRFRA*
Ga0070715_1087218523300006163Corn, Switchgrass And Miscanthus RhizosphereETAAQGAEQTSAATEQQIASLSELTTTSQHLSVAAAKLSETIQRFNVNGKA*
Ga0066665_1142670323300006796SoilSAATEQQIASLSELTTTTQHLSVAAAKLTETIERFNVNGKA*
Ga0066665_1168114933300006796SoilAATEQQIASLGELTTTSQHLSVAAARLTETMQRFTVNGKA*
Ga0066659_1121019413300006797SoilGAQRTSAATEQQIASLGELTTTSQQLAVAAAKLPETIQQFNVNGASLPTPE*
Ga0079221_1005934633300006804Agricultural SoilQQIASLGELSMTSQHLSVAAAKLSETIQRFNVNGKA*
Ga0075431_10110778423300006847Populus RhizosphereQIASLGELTTTSQHLSTAASTLTETIQRFNVNGSR*
Ga0075425_10008450153300006854Populus RhizosphereTSAATAKQMSSLNDLTTTSQHLSDAAAALSETIQRFRA*
Ga0075436_10004748613300006914Populus RhizosphereEQASAATQQQIASLGELTTTSQQLSVAAAKLSETIQRFSVNGGSSPPTR*
Ga0066710_10230942733300009012Grasslands SoilSAATEQQIASLSELTTTTQHLSVAAAKLTETIERFNVNGKA
Ga0066710_10479750123300009012Grasslands SoilEQTSAATEQQIASLSELTTTTQHLSVAVAKLTETIERFNVNGKA
Ga0099829_1010371013300009038Vadose Zone SoilQGAEQTSAATQQQIASLGELTTTSQHLSVAAAKLSETIQRFNVNGKA*
Ga0099828_1199612923300009089Vadose Zone SoilAQGAQQTTAATQQQIASLGELTATSQHLSVAAAKLTETIQRFTVNGKSKP*
Ga0099828_1200088223300009089Vadose Zone SoilAQGAQQTTAATQQQIASLGELTATSQHLSVAAAKLTETIQRFTVNGKSGP*
Ga0099827_1004336113300009090Vadose Zone SoilTEEQIASLSELTTTSQHLSVAAAKLTETIQRFRVNGKS*
Ga0066709_10299691533300009137Grasslands SoilQASAATAEQIASLGELTATSQHLSVAAAKLTETIRRFNVDGRA*
Ga0099792_1085251513300009143Vadose Zone SoilSAATEQQIASLGELTMTSQHLSVAAAKLTETIQRFNVNGKA*
Ga0114129_1191334313300009147Populus RhizosphereAAQGAEQTSAATEQQIASLGELTTTSQHLSVAAAQLSETIQRFNVNGKA*
Ga0127445_104542713300010085Grasslands SoilIASLGELTMTSQHLSVAAAKLSETIQRFNVNGKA*
Ga0127449_111441623300010117Grasslands SoilAEQTSAATEQQIASLGELTMTSQHLSVAAAKLSETIQRFNVNGKA*
Ga0127498_115478413300010124Grasslands SoilEEQIASLGELTTTSQHLSVAAAKLTETIQRFRVNGKS*
Ga0134070_1002213513300010301Grasslands SoilTAQQIASLSELTTTSEHLSDAAATLSVTIQRFRIKANGG*
Ga0134088_1002744643300010304Grasslands SoilGAEQTSAATEQQIASLSELTTTTQHLSVAAAKLTETIERFNVNGKA*
Ga0134088_1036482813300010304Grasslands SoilQQIASLSELTTTTQHLSVAAAKLTETIERFNVNGKAGRSA*
Ga0134088_1055454013300010304Grasslands SoilEQQIASLGELTTTSQHLSVAAARLTETMQRFNVNGLATARGR*
Ga0134109_1038595923300010320Grasslands SoilAATEEQIASLSELTTTSQHLSVAAAKLTETIQRFRVNGKS*
Ga0134067_1006855433300010321Grasslands SoilIASLGELTTTSQQLAVAAARLTETMQRFNVNGASLPAPE*
Ga0134067_1030032413300010321Grasslands SoilQGAEQTSAATERQIASLGELSTTSQQLAVAAAKLIETIQHFNVNGASLPAAE*
Ga0134063_1000382673300010335Grasslands SoilIASLGELTTTSQHLSVAAARLTETIQRFNVNGKA*
Ga0134063_1001288953300010335Grasslands SoilQQIASLGQLTTTSQHLSVAAAKLTETIQRFHVNGKA*
Ga0134063_1051978213300010335Grasslands SoilHGAEQTSAATEQQIASLGELTTTSQQLAVAAARLTETIQRFNVDGAKLPPPQ*
Ga0134071_1004824613300010336Grasslands SoilASLSELTTTTQHLSVAAAKLTETIERFNVNGKAGRSA*
Ga0134071_1005238733300010336Grasslands SoilAQQIASLSELTSTSQRLSDAATVLAQTIKRFRISGNGGGAP*
Ga0134066_1013832713300010364Grasslands SoilVCSAPCIAETAAQGAEQTSAATERQIASLGELTTTSQQLAVAAAKLTETIQQFNVNGASLPTPE*
Ga0134126_1083834123300010396Terrestrial SoilGAEQTSAATEQQIASLSELTTTSQHLSVAAAKLSETIQRFNVNGKA*
Ga0137392_1011911413300011269Vadose Zone SoilQTSAATQQQIASLGELTTTSQHLSVAAAKLSETIQRFNVNGKA*
Ga0137391_1047566813300011270Vadose Zone SoilQIASLGELTTTSQHLAVAAAKLAQTIQRFSANGGRLPPPQ*
Ga0137442_113066013300011414SoilTEEQIASLGELTATSQHLSVAASKLAQTIKRFTVNGAGPGAKH*
Ga0137383_1102932823300012199Vadose Zone SoilQTSAATAQQILSLNELTTTSQHLSDAAAALSETIQRFRA*
Ga0137365_1009200633300012201Vadose Zone SoilAEQTSAATEQQIAALGELTTTSQQLSVAAARLTETIQRFNVDGRT*
Ga0137365_1057904013300012201Vadose Zone SoilAEQTSAATEQQIAALGELTTTSQQLSVAAARLTETIQRFNVNGAKLPPPK*
Ga0137399_1165053523300012203Vadose Zone SoilAATEQQIASLSELTTTSQHLSVAAAKLTETIQRFNVSGKA*
Ga0137374_1109984023300012204Vadose Zone SoilEQASAATEQQIASLGELTTTSQHLSVAAAKLTETIQRFNVNGKE*
Ga0137387_1008912023300012349Vadose Zone SoilAAHGAEQTSAATEQQIASLGELTTTSQHLSVAAAKLSETIQRFNVNGKA*
Ga0137367_1060214513300012353Vadose Zone SoilAAQGAEQASAATQEQIASLGELTATSQHLSVAAAKLTETIQRFHVNGTA*
Ga0137384_1078913823300012357Vadose Zone SoilAEQTSAATEQQIASLGELTTTSQHLSVAAAKLTETIQRFKVNGKA*
Ga0137385_1156001013300012359Vadose Zone SoilSAATEQQIASLGELTTTSQHLSVAAAKLSETIQRFNVNGKA*
Ga0137375_1051792613300012360Vadose Zone SoilEQIASLGELTATSQHLSVAAAKLTETIQRFNVNGTA*
Ga0137361_1152127923300012362Vadose Zone SoilAQQIASLSELTTTSQHLSDAAATLTETIRRFRINGKSG*
Ga0137390_1047844533300012363Vadose Zone SoilAATEQQIASLGELTTTSQHLAVAAAKLAQTIQRFSANGGRLPPPQ*
Ga0134032_113193213300012376Grasslands SoilEQIASLGELTTTSQHLSVAAAKLTETIQRFNVNGKA*
Ga0134050_137728513300012407Grasslands SoilQQIASLGELTMTSQHLAVAAAKLSETIQRFNVNGKA*
Ga0137397_1083547923300012685Vadose Zone SoilQIASLSELTTTSQHLSVAAAKLSETIQRFNVNGKT*
Ga0137395_1099205413300012917Vadose Zone SoilAATERQIASLGELTAVSQQLSATATALTETIRRFRTNGAA*
Ga0137396_1008855213300012918Vadose Zone SoilAATAEQIASLDELSTTSQHLSTAAAKLTETIQRFVVNGKT*
Ga0137394_1014430843300012922Vadose Zone SoilQIASLSELTTTSQHLSVAAAKLTETIQRFNVNGKT*
Ga0137419_1048815613300012925Vadose Zone SoilTATEGAQQTSAATEEQIASLGELTTTSQHLSVAAAKLTETIQRFRVNGKS*
Ga0137404_1081477313300012929Vadose Zone SoilETAAQGAEQTSAATEQQIASLGELTTTSQHLSVAAAKLSETIQRFNVNGKV*
Ga0137407_1119274713300012930Vadose Zone SoilHIAAGAADGAQQTSAATQEQIASLGELTATSQHLSNAAAKLAQTIQRFTVNGAGASH*
Ga0134077_1047934113300012972Grasslands SoilIASLGELTTTTQHLSVAAAKLTETIERFNVNGKAGRSA*
Ga0134076_1047951913300012976Grasslands SoilATAQQIASLSELTSTSQRLSDAATVLAQTIKRFRISGNGGGAP*
Ga0134075_1017567313300014154Grasslands SoilGAEQASAATAQQIAALDELTTTSQHLSAAAAKLTETIQQFVVNGKA*
Ga0134075_1030107123300014154Grasslands SoilSAATEQQIASLAQLTTTSQQLSVAAAKLAQTIQRFNVNGGSSPAPQ*
Ga0134078_1050298023300014157Grasslands SoilAAQGAEQTSAATEQQIASLGEFTTTSQHLSVAAAKLIETIQLFNVNGKA*
Ga0134085_1039642013300015359Grasslands SoilASAATAEQITSLGELTATSRHLSVGAAQLAETIRPFNVDGRA*
Ga0134112_1003535233300017656Grasslands SoilLGELTTTTQHLSVAAAKLTETIQRFNVDGAKSPPSQ
Ga0134112_1006879533300017656Grasslands SoilSAATEQQIASLGELTTTSQHLSVAAAKLSETIQRFNVNGKA
Ga0134112_1011044023300017656Grasslands SoilAATQQQIASLGELTTTSQQLSVAAAKLSETIQRFNLNGKA
Ga0134074_102904513300017657Grasslands SoilASLSDLTTTSQHLSDAAATLSQTIQRFRVSGNGLPASE
Ga0066655_1072487823300018431Grasslands SoilATAQQIAALDELTTTSQHLSAAAAKLTETIQRFVVNGKA
Ga0066667_1084437013300018433Grasslands SoilCGSIGELTTTPQHLSVAAAKLSKTIQRCHVNGEGSDSPAPQ
Ga0066662_1078183613300018468Grasslands SoilTEEQIASLGELTTTSHHLSVAAAKLTETIQRFTVNGKA
Ga0066669_1161435613300018482Grasslands SoilAATAQQIASLIELTATSEHLSDAAATLSETIQRFRA
Ga0066669_1203280513300018482Grasslands SoilATEQQIASLGELTTTSQQLAVAAAKLTETIQQFNVNGASLPTPE
Ga0207685_1024855023300025905Corn, Switchgrass And Miscanthus RhizosphereETAAQGAEQTSAATEQQIASLSELTTTSQHLSVAAAKLSETIQRFNVNGKA
Ga0207685_1036706623300025905Corn, Switchgrass And Miscanthus RhizosphereGAEQTSAATEQQIASLGELTMTSQHLSVAAAKLSETIQRFHVNGKA
Ga0209350_103427033300026277Grasslands SoilAEQTSAATEQQIASLSELTTTTQHLSVAAAKLTETIERFNVNGKE
Ga0209235_100020833300026296Grasslands SoilMEEVAGIADSAAHGAEQTSGATELQIASLGDLTTTEQHLSVAAAKLTETIQRFTVDGKA
Ga0209235_120829413300026296Grasslands SoilQTSAATEQQIASLSELTTTTQHLSVAAAKLTETIERFNVNGKA
Ga0209235_125994613300026296Grasslands SoilAHGAEQTSAATEQQIASLGQLTTTSQHLSVAAAKLTETIQRFHVNGAKLPPPK
Ga0209237_115963823300026297Grasslands SoilQQIASLGELTTTSQHLSVAAAKLTETIQRFNVNGKA
Ga0209238_101736913300026301Grasslands SoilQIASLGELTTTSQHLSVAAARLTETMQRFTLNGKA
Ga0209761_115229013300026313Grasslands SoilQTSAATEQQIASLSELTTTTQHLSVAAAKLTETIERFNVNGKE
Ga0209154_128622213300026317SoilEQTSAATAEQIASLDELTTTSQQLSAAATKLTETIQRFNVNGKA
Ga0209471_101059713300026318SoilTAQQIASLDELTTTSRHLSAAATKLTETIQRFVVNGKA
Ga0209470_102071313300026324SoilTEQQIASLGELTMTSQHLSVAAAKLSETIQRFNVNGKA
Ga0209152_1023901413300026325SoilQRQIASLGELSTTSQQLAVAAAKLSETIERFNVNGASLPASE
Ga0209473_100493913300026330SoilSAATEEQIASLGELTTTSQHLSVAAAKLTETIQRFNVNGKA
Ga0209267_1005004103300026331SoilASLGELTTTSQQLAVAAAKLTETIQQFNVNGASLPTPE
Ga0209377_125601413300026334SoilAAQGAEQTSAATEQQIASLGELTTTSQHLSVAAARLTETIQRFTVNGKA
Ga0209056_10007563123300026538SoilAEQTSAATEQQIASLGELTTTSQHLSVAAARLTETMQRFNVNGLATARGR
Ga0209376_109447933300026540SoilTAAQGAEQTSAATEQQIASLGELTMTSQHLSVAAAKLSETIQRFNVNGKA
Ga0209805_111226333300026542SoilVRRMDEAAGIAETAAQGAEQTSAATERQIVSLGELSTTSQQLAVAAAKLIETIQHFNVNGASLPAAE
Ga0208997_106533223300027181Forest SoilDTAAQGAEQTSAATEEQIASLGELTTTSQHLSVAAAKLTETIQRFNVNGKG
Ga0209213_104232523300027383Forest SoilEQIASLSELTTTSQHLSVAAAKLTETIQRFNVNGKG
Ga0209590_1080398813300027882Vadose Zone SoilEQTSAATEQQIASLSELTATSQQLSVAAAKLTDTIQRFNVNGKA
Ga0209486_1092180423300027886Agricultural SoilMEEVAGIADGAAQGAEQASTATQQQIASLGELATTSRHLSAAAAKLTETIQRLNVDGKV
Ga0247685_104227323300028065SoilEQASAATQQQIASLGELTTTSQQLSVAAAKLSETIQRFSVNGSSSPPTS
Ga0137415_1040020023300028536Vadose Zone SoilTEQQIASLSELTTTSQHLSVAAAKLSETIQRFNVNGKG
Ga0307501_1003702123300031152SoilTEEQIASLGELTTTSQHLSVAAAKLTETIRRFNVNGKG
Ga0307469_1102896623300031720Hardwood Forest SoilQQIASLGELTTTSQQLSVAAAKLSETIQRFNVNGSSSPPPR
Ga0307479_1209119423300031962Hardwood Forest SoilVATEQQIASLGELTTTSQQLAVAAAKLIETMQRFNVNGASLPASQ

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.