NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F056186

Metagenome Family F056186

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F056186
Family Type Metagenome
Number of Sequences 138
Average Sequence Length 63 residues
Representative Sequence MTKAQAAALREKWAEGENLPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI
Number of Associated Samples 101
Number of Associated Scaffolds 138

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 48.55 %
% of genes near scaffold ends (potentially truncated) 26.81 %
% of genes from short scaffolds (< 2000 bps) 72.46 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (87.681 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment
(10.145 % of family members)
Environment Ontology (ENVO) Unclassified
(20.290 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Subsurface (non-saline)
(16.667 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.00%    β-sheet: 15.00%    Coil/Unstructured: 65.00%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 138 Family Scaffolds
PF04298Zn_peptidase_2 13.04
PF00999Na_H_Exchanger 10.87
PF00773RNB 2.17
PF09957VapB_antitoxin 2.17
PF01904DUF72 2.17
PF00072Response_reg 1.45
PF01850PIN 1.45
PF13683rve_3 1.45
PF13185GAF_2 1.45
PF08238Sel1 0.72
PF01384PHO4 0.72
PF12695Abhydrolase_5 0.72
PF13482RNase_H_2 0.72
PF05598DUF772 0.72
PF00892EamA 0.72
PF09836DUF2063 0.72
PF08212Lipocalin_2 0.72
PF01048PNP_UDP_1 0.72
PF16068DUF4810 0.72
PF00528BPD_transp_1 0.72
PF02321OEP 0.72
PF12762DDE_Tnp_IS1595 0.72
PF13487HD_5 0.72
PF01139RtcB 0.72
PF01527HTH_Tnp_1 0.72
PF01370Epimerase 0.72
PF00565SNase 0.72

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 138 Family Scaffolds
COG2738Zn-dependent membrane protease YugPPosttranslational modification, protein turnover, chaperones [O] 13.04
COG0025NhaP-type Na+/H+ or K+/H+ antiporterInorganic ion transport and metabolism [P] 10.87
COG0475Kef-type K+ transport system, membrane component KefBInorganic ion transport and metabolism [P] 10.87
COG3004Na+/H+ antiporter NhaAEnergy production and conversion [C] 10.87
COG3263NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domainsEnergy production and conversion [C] 10.87
COG4651Predicted Kef-type K+ transport protein, K+/H+ antiporter domainInorganic ion transport and metabolism [P] 10.87
COG0557Exoribonuclease RTranscription [K] 2.17
COG1801Sugar isomerase-related protein YecE, UPF0759/DUF72 familyGeneral function prediction only [R] 2.17
COG4776Exoribonuclease IITranscription [K] 2.17
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 1.45
COG0306Phosphate/sulfate permeaseInorganic ion transport and metabolism [P] 0.72
COG0775Nucleoside phosphorylase/nucleosidase, includes 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase MtnN and futalosine hydrolase MqnBNucleotide transport and metabolism [F] 0.72
COG0813Purine-nucleoside phosphorylaseNucleotide transport and metabolism [F] 0.72
COG1690RNA-splicing ligase RtcB, repairs tRNA damageTranslation, ribosomal structure and biogenesis [J] 0.72
COG2820Uridine phosphorylaseNucleotide transport and metabolism [F] 0.72
COG3040Bacterial lipocalin BlcCell wall/membrane/envelope biogenesis [M] 0.72

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms87.68 %
UnclassifiedrootN/A12.32 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918013|NODE_3216_length_1231_cov_8.026808Not Available1263Open in IMG/M
3300000956|JGI10216J12902_110238451All Organisms → cellular organisms → Bacteria → Nitrospirae869Open in IMG/M
3300001372|YBBDRAFT_1151379All Organisms → cellular organisms → Bacteria → Nitrospirae1535Open in IMG/M
3300002124|C687J26631_10230764All Organisms → cellular organisms → Bacteria → Nitrospirae614Open in IMG/M
3300003310|D1draft_1000041All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii257236Open in IMG/M
3300003859|Ga0031653_10001242All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii6305Open in IMG/M
3300003861|Ga0031654_10027386All Organisms → cellular organisms → Bacteria → Nitrospirae1640Open in IMG/M
3300003861|Ga0031654_10174885All Organisms → cellular organisms → Bacteria → Nitrospirae611Open in IMG/M
3300004052|Ga0055490_10078430All Organisms → cellular organisms → Bacteria → Nitrospirae905Open in IMG/M
3300004114|Ga0062593_101954676All Organisms → cellular organisms → Bacteria → Nitrospirae650Open in IMG/M
3300004282|Ga0066599_100604119All Organisms → cellular organisms → Bacteria → Nitrospirae736Open in IMG/M
3300004282|Ga0066599_101582289All Organisms → cellular organisms → Bacteria → Nitrospirae507Open in IMG/M
3300005332|Ga0066388_100176912All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Nitrospira defluvii2739Open in IMG/M
3300005332|Ga0066388_100323126All Organisms → cellular organisms → Bacteria → Nitrospirae2189Open in IMG/M
3300005345|Ga0070692_11078537All Organisms → cellular organisms → Bacteria → Nitrospirae566Open in IMG/M
3300005438|Ga0070701_10503107Not Available787Open in IMG/M
3300005440|Ga0070705_100210836All Organisms → cellular organisms → Bacteria → Nitrospirae1339Open in IMG/M
3300005441|Ga0070700_101257022All Organisms → cellular organisms → Bacteria → Nitrospirae620Open in IMG/M
3300005468|Ga0070707_101590342All Organisms → cellular organisms → Bacteria → Nitrospirae621Open in IMG/M
3300005471|Ga0070698_101157017All Organisms → cellular organisms → Bacteria → Nitrospirae722Open in IMG/M
3300005488|Ga0074213_101456All Organisms → cellular organisms → Bacteria2423Open in IMG/M
3300005536|Ga0070697_101552284All Organisms → cellular organisms → Bacteria → Nitrospirae592Open in IMG/M
3300005545|Ga0070695_101305201Not Available600Open in IMG/M
3300005549|Ga0070704_100568727All Organisms → cellular organisms → Bacteria → Nitrospirae992Open in IMG/M
3300005598|Ga0066706_11397512All Organisms → cellular organisms → Bacteria → Nitrospirae528Open in IMG/M
3300005827|Ga0074478_1281909All Organisms → cellular organisms → Bacteria → Nitrospirae6636Open in IMG/M
3300005829|Ga0074479_10403465Not Available1466Open in IMG/M
3300005829|Ga0074479_10645716All Organisms → cellular organisms → Bacteria3993Open in IMG/M
3300005833|Ga0074472_10041455All Organisms → cellular organisms → Bacteria → Nitrospirae792Open in IMG/M
3300005833|Ga0074472_10069661All Organisms → cellular organisms → Bacteria → Nitrospirae597Open in IMG/M
3300005833|Ga0074472_10303728All Organisms → cellular organisms → Bacteria → Nitrospirae998Open in IMG/M
3300005833|Ga0074472_10304064All Organisms → cellular organisms → Bacteria → Nitrospirae631Open in IMG/M
3300005833|Ga0074472_10340155All Organisms → cellular organisms → Bacteria → Nitrospirae5306Open in IMG/M
3300005833|Ga0074472_10364018Not Available1576Open in IMG/M
3300005833|Ga0074472_11397670All Organisms → cellular organisms → Bacteria3459Open in IMG/M
3300005833|Ga0074472_11509451All Organisms → cellular organisms → Bacteria → Nitrospirae994Open in IMG/M
3300005836|Ga0074470_11252461All Organisms → cellular organisms → Bacteria9749Open in IMG/M
3300005940|Ga0073913_10061385All Organisms → cellular organisms → Bacteria → Nitrospirae611Open in IMG/M
3300005943|Ga0073926_10021065All Organisms → cellular organisms → Bacteria → Nitrospirae1190Open in IMG/M
3300006007|Ga0073917_1022549All Organisms → cellular organisms → Bacteria → Nitrospirae620Open in IMG/M
3300006041|Ga0075023_100015747All Organisms → cellular organisms → Bacteria2029Open in IMG/M
3300006041|Ga0075023_100075500All Organisms → cellular organisms → Bacteria → Nitrospirae1116Open in IMG/M
3300006057|Ga0075026_100709884All Organisms → cellular organisms → Bacteria → Nitrospirae602Open in IMG/M
3300006057|Ga0075026_100829892All Organisms → cellular organisms → Bacteria → Nitrospirae563Open in IMG/M
3300006854|Ga0075425_100038228All Organisms → cellular organisms → Bacteria5350Open in IMG/M
3300009012|Ga0066710_103098464All Organisms → cellular organisms → Bacteria → Nitrospirae → unclassified Nitrospirae → Nitrospirae bacterium643Open in IMG/M
3300009053|Ga0105095_10043596Not Available2414Open in IMG/M
3300009078|Ga0105106_10024938All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira4413Open in IMG/M
3300009078|Ga0105106_10092762All Organisms → cellular organisms → Bacteria2221Open in IMG/M
3300009084|Ga0105046_10048714All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira5916Open in IMG/M
3300009111|Ga0115026_10241855Not Available1231Open in IMG/M
3300009167|Ga0113563_10243169All Organisms → cellular organisms → Bacteria → Nitrospirae1825Open in IMG/M
3300009167|Ga0113563_13179756All Organisms → cellular organisms → Bacteria → Nitrospirae556Open in IMG/M
3300009171|Ga0105101_10155068All Organisms → cellular organisms → Bacteria → Nitrospirae1110Open in IMG/M
3300009176|Ga0105242_10696890All Organisms → cellular organisms → Bacteria → Nitrospirae993Open in IMG/M
3300009777|Ga0105164_10512182All Organisms → cellular organisms → Bacteria → Nitrospirae595Open in IMG/M
3300009798|Ga0105060_103202All Organisms → cellular organisms → Bacteria → Nitrospirae860Open in IMG/M
3300010047|Ga0126382_10518437All Organisms → cellular organisms → Bacteria → Nitrospirae962Open in IMG/M
3300010047|Ga0126382_10572970All Organisms → cellular organisms → Bacteria → Nitrospirae923Open in IMG/M
3300010400|Ga0134122_10371114All Organisms → cellular organisms → Bacteria → Nitrospirae1253Open in IMG/M
3300010400|Ga0134122_12333859All Organisms → cellular organisms → Bacteria → Nitrospirae581Open in IMG/M
3300011406|Ga0137454_1037945All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrificans730Open in IMG/M
3300011414|Ga0137442_1156528All Organisms → cellular organisms → Bacteria → Nitrospirae508Open in IMG/M
3300011421|Ga0137462_1001733All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira3518Open in IMG/M
3300011429|Ga0137455_1044683All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium1244Open in IMG/M
3300012226|Ga0137447_1037486Not Available831Open in IMG/M
3300012226|Ga0137447_1074067All Organisms → cellular organisms → Bacteria → Nitrospirae654Open in IMG/M
3300012226|Ga0137447_1103648All Organisms → cellular organisms → Bacteria → Nitrospirae566Open in IMG/M
3300012668|Ga0157216_10210674Not Available917Open in IMG/M
3300012948|Ga0126375_10030685All Organisms → cellular organisms → Bacteria2659Open in IMG/M
3300012948|Ga0126375_11844590All Organisms → cellular organisms → Bacteria → Nitrospirae529Open in IMG/M
3300014296|Ga0075344_1015226Not Available1125Open in IMG/M
3300014324|Ga0075352_1123407All Organisms → cellular organisms → Bacteria → Nitrospirae703Open in IMG/M
3300015245|Ga0137409_10073682All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira3197Open in IMG/M
3300015360|Ga0163144_10019306All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira13717Open in IMG/M
3300015360|Ga0163144_10164285All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira3220Open in IMG/M
3300015371|Ga0132258_13340647All Organisms → cellular organisms → Bacteria → Nitrospirae1103Open in IMG/M
3300017695|Ga0180121_10012208All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira3097Open in IMG/M
3300017944|Ga0187786_10386957All Organisms → cellular organisms → Bacteria → Nitrospirae603Open in IMG/M
3300018052|Ga0184638_1284442All Organisms → cellular organisms → Bacteria → Nitrospirae562Open in IMG/M
3300018433|Ga0066667_12293310All Organisms → cellular organisms → Bacteria → Nitrospirae505Open in IMG/M
3300018469|Ga0190270_10153338All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira1876Open in IMG/M
3300018469|Ga0190270_11971275All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrificans642Open in IMG/M
3300018476|Ga0190274_12871173All Organisms → cellular organisms → Bacteria → Nitrospirae578Open in IMG/M
3300019360|Ga0187894_10000162All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira88418Open in IMG/M
3300019362|Ga0173479_10873830All Organisms → cellular organisms → Bacteria → Nitrospirae506Open in IMG/M
3300019377|Ga0190264_10006618All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira3172Open in IMG/M
3300019487|Ga0187893_10036410All Organisms → cellular organisms → Bacteria5394Open in IMG/M
3300019882|Ga0193713_1140887All Organisms → cellular organisms → Bacteria → Nitrospirae653Open in IMG/M
3300019997|Ga0193711_1042191All Organisms → cellular organisms → Bacteria → Nitrospirae556Open in IMG/M
3300020057|Ga0163151_10000308All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira87003Open in IMG/M
3300020057|Ga0163151_10054591All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira2859Open in IMG/M
3300020180|Ga0163155_10164167All Organisms → cellular organisms → Bacteria → Nitrospirae1178Open in IMG/M
3300020186|Ga0163153_10000450All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira73497Open in IMG/M
3300021063|Ga0206227_1068470All Organisms → cellular organisms → Bacteria → Nitrospirae669Open in IMG/M
3300022222|Ga0226658_10160055All Organisms → cellular organisms → Bacteria → Nitrospirae1033Open in IMG/M
3300022222|Ga0226658_10425535Not Available593Open in IMG/M
3300024304|Ga0233391_1000010All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira9793Open in IMG/M
3300025159|Ga0209619_10344370All Organisms → cellular organisms → Bacteria → Nitrospirae781Open in IMG/M
3300025312|Ga0209321_10105506All Organisms → cellular organisms → Bacteria1555Open in IMG/M
3300025936|Ga0207670_10538629All Organisms → cellular organisms → Bacteria → Nitrospirae952Open in IMG/M
3300026507|Ga0257165_1081907All Organisms → cellular organisms → Bacteria → Nitrospirae594Open in IMG/M
3300027393|Ga0209867_1020132Not Available955Open in IMG/M
3300027547|Ga0209864_1039765All Organisms → cellular organisms → Bacteria → Nitrospirae597Open in IMG/M
3300027731|Ga0209592_1097930All Organisms → cellular organisms → Bacteria → Nitrospirae1072Open in IMG/M
3300027821|Ga0209811_10216627All Organisms → cellular organisms → Bacteria → Nitrospirae726Open in IMG/M
3300027900|Ga0209253_10013749All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira inopinata6907Open in IMG/M
3300027902|Ga0209048_10179906All Organisms → cellular organisms → Bacteria → Nitrospirae1553Open in IMG/M
3300027910|Ga0209583_10012885All Organisms → cellular organisms → Bacteria2513Open in IMG/M
3300027910|Ga0209583_10141005All Organisms → cellular organisms → Bacteria → Nitrospirae976Open in IMG/M
3300027910|Ga0209583_10173557All Organisms → cellular organisms → Bacteria → Nitrospirae900Open in IMG/M
3300027910|Ga0209583_10260205All Organisms → cellular organisms → Bacteria → Nitrospirae770Open in IMG/M
3300027915|Ga0209069_10159398All Organisms → cellular organisms → Bacteria1127Open in IMG/M
3300027979|Ga0209705_10188712Not Available1087Open in IMG/M
3300027979|Ga0209705_10228770All Organisms → cellular organisms → Bacteria → Nitrospirae967Open in IMG/M
3300028380|Ga0268265_11415963All Organisms → cellular organisms → Bacteria → Nitrospirae697Open in IMG/M
3300031455|Ga0307505_10013858All Organisms → cellular organisms → Bacteria3919Open in IMG/M
3300031834|Ga0315290_10033100All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira4107Open in IMG/M
3300031834|Ga0315290_10062873All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira inopinata3047Open in IMG/M
3300031834|Ga0315290_10083299All Organisms → cellular organisms → Bacteria → Nitrospirae2667Open in IMG/M
3300031834|Ga0315290_10838621Not Available784Open in IMG/M
3300031862|Ga0315280_10038701All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira4388Open in IMG/M
3300032018|Ga0315272_10158170All Organisms → cellular organisms → Bacteria1069Open in IMG/M
3300032163|Ga0315281_10027650All Organisms → cellular organisms → Bacteria7271Open in IMG/M
3300032163|Ga0315281_10243065All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira1988Open in IMG/M
3300032177|Ga0315276_12240306All Organisms → cellular organisms → Bacteria → Nitrospirae552Open in IMG/M
3300032180|Ga0307471_101411158All Organisms → cellular organisms → Bacteria → Nitrospirae856Open in IMG/M
3300032205|Ga0307472_101210450Not Available722Open in IMG/M
3300032256|Ga0315271_10137199All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira1904Open in IMG/M
3300032275|Ga0315270_10278293All Organisms → cellular organisms → Bacteria → Nitrospirae1044Open in IMG/M
3300032275|Ga0315270_10328333Not Available964Open in IMG/M
3300032275|Ga0315270_10508282Not Available778Open in IMG/M
3300032275|Ga0315270_11070533All Organisms → cellular organisms → Bacteria → Nitrospirae535Open in IMG/M
3300032456|Ga0335394_10525077All Organisms → cellular organisms → Bacteria → Nitrospirae956Open in IMG/M
3300033433|Ga0326726_10001864All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira19631Open in IMG/M
3300033433|Ga0326726_10240365All Organisms → cellular organisms → Bacteria → Nitrospirae1683Open in IMG/M
3300034155|Ga0370498_132259All Organisms → cellular organisms → Bacteria → Nitrospirae595Open in IMG/M
3300034155|Ga0370498_171649All Organisms → cellular organisms → Bacteria → Nitrospirae530Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment10.14%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)8.70%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds6.52%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.52%
Freshwater Microbial MatEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat5.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.80%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment5.07%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil5.07%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment3.62%
SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sand3.62%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.17%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.45%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater1.45%
FreshwaterEnvironmental → Aquatic → Freshwater → Pond → Sediment → Freshwater1.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.45%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.45%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.45%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.45%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil1.45%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.45%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.45%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment1.45%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.45%
Microbial Mat On RocksEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks1.45%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland0.72%
SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Sediment0.72%
WastewaterEnvironmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater0.72%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand0.72%
Marine EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine0.72%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.72%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.72%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.72%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.72%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.72%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.72%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.72%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.72%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.72%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.72%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.72%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.72%
Down-Flow Hanging Sponge ReactorEngineered → Bioreactor → Unclassified → Unclassified → Unclassified → Down-Flow Hanging Sponge Reactor0.72%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918013Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)EnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001372YB-Back-sedEnvironmentalOpen in IMG/M
3300002124Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_3EnvironmentalOpen in IMG/M
3300003310Down-flow hanging sponge reactor microbial communities from the University of Illinois at Urbana-Champaign, USA - L1-648F-DHSEngineeredOpen in IMG/M
3300003859Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BREnvironmentalOpen in IMG/M
3300003861Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CREnvironmentalOpen in IMG/M
3300004052Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004282Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sedimentEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005488Sediment ecosystem from Lake Washington, Seattle, Washington, USA - Methane enrichmentEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005827Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.188_CBAEnvironmentalOpen in IMG/M
3300005829Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBCEnvironmentalOpen in IMG/M
3300005833Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBKEnvironmentalOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300005940Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14EnvironmentalOpen in IMG/M
3300005943Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_4-Nov-14EnvironmentalOpen in IMG/M
3300006007Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T3_23-Sept-14EnvironmentalOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009053Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009084Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-03 (megahit assembly)EnvironmentalOpen in IMG/M
3300009111Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1EnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009171Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009777Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking waterEnvironmentalOpen in IMG/M
3300009798Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_40_50EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011406Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT539_2EnvironmentalOpen in IMG/M
3300011414Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2EnvironmentalOpen in IMG/M
3300011421Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT769_2EnvironmentalOpen in IMG/M
3300011429Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2EnvironmentalOpen in IMG/M
3300012226Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT400_2EnvironmentalOpen in IMG/M
3300012668Arctic soils microbial communities. Combined Assembly of 23 SPsEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300014296Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D1EnvironmentalOpen in IMG/M
3300014324Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1EnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015360Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300017695Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)EnvironmentalOpen in IMG/M
3300017944Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MGEnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019360White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaGEnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019487White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaGEnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300019997Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3m2EnvironmentalOpen in IMG/M
3300020057Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2EnvironmentalOpen in IMG/M
3300020180Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.SP4.G1EnvironmentalOpen in IMG/M
3300020186Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1EnvironmentalOpen in IMG/M
3300021063Subsurface sediment microbial communities from Mancos shale, Colorado, United States - Mancos D4EnvironmentalOpen in IMG/M
3300022222Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1 (v2)EnvironmentalOpen in IMG/M
3300024304Subsurface microbial communities from Mancos shale, Colorado, United States - Mancos A_10_July_PBEnvironmentalOpen in IMG/M
3300025159Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3EnvironmentalOpen in IMG/M
3300025312Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 4 - CSP-I_5_4EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026507Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-BEnvironmentalOpen in IMG/M
3300027393Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_4-Nov-14 (SPAdes)EnvironmentalOpen in IMG/M
3300027547Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14 (SPAdes)EnvironmentalOpen in IMG/M
3300027731Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027900Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)EnvironmentalOpen in IMG/M
3300027902Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027979Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031455Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_SEnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031862Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_40EnvironmentalOpen in IMG/M
3300032018Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middleEnvironmentalOpen in IMG/M
3300032163Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0EnvironmentalOpen in IMG/M
3300032177Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300032275Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottomEnvironmentalOpen in IMG/M
3300032456Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - MAT-03 (spades assembly)EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300034155Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Iowa-Corn-GraphCirc_013814102140918013SoilTKAQAAALREKWAEGDNPPCRHLHLELEHDNDDYLTDNYHCTACGELVAANTRDPFQVI
JGI10216J12902_11023845123300000956SoilMTKSQAAALREKWAYGDNPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRDPFQVI
YBBDRAFT_115137953300001372Marine EstuarineMEADIMTKAQAVALREKWAYGDNPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI*
C687J26631_1023076413300002124SoilVDIMTKEQAAALRVQWAEGENPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRNPFQVI*
D1draft_1000041703300003310Down-Flow Hanging Sponge ReactorMTKAQAAALREKWTEGDNPPCRHLHLELEHDNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0031653_1000124243300003859Freshwater Lake SedimentMGVDIMTKAQAAALREKWAEGENLPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRDPFQVI*
Ga0031654_1002738633300003861Freshwater Lake SedimentMGVDIMTKTQAAALREKWAEGENLPCKHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFEVV*
Ga0031654_1017488513300003861Freshwater Lake SedimentMTKAQAAALRAKWAEGENPPCKHLHLELEHNNDDYLTDNYHCTACGELVAANTHDPFQVI
Ga0055490_1007843033300004052Natural And Restored WetlandsMGVDIMTKEQAAALRVQWAEGENPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRNPFQVI*
Ga0062593_10195467623300004114SoilMEVGIMTKAQAAALREKWAEGDNPPCRHLHLELEHDNDDYLTDNYHCTACGELVAANTRDPFQVI*
Ga0066599_10060411923300004282FreshwaterMEVDIMTKSQAAALREKWAYGDNPPCRHLHLELEHNNDNYLTDNYHCTACGELVAANTRDPFQVI*
Ga0066599_10158228913300004282FreshwaterMTKSQAAALREKWAEGDNPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRDPFQ
Ga0066388_10017691213300005332Tropical Forest SoilMTKTQAAALRMQWAEEADQPCKHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0066388_10032312633300005332Tropical Forest SoilMTKAQAAALRMKWAEGEDLPCKHLHLELEHGNDDYMTDNYHCTACGELVAANTHDPFQVI
Ga0070692_1107853713300005345Corn, Switchgrass And Miscanthus RhizosphereMEVGIMTKAQAAALREKWAEGDNPPCRHLHLELEHDNDDYLTDNYHCTACGELVAANTRD
Ga0070701_1050310713300005438Corn, Switchgrass And Miscanthus RhizosphereKAQAAALREKWAEGDNPPCRHLHLELEHDNDDYLTDNYHCTACGELVAANTRDPFQVI*
Ga0070705_10021083613300005440Corn, Switchgrass And Miscanthus RhizosphereMVSDKGVDIMMKAQAAALRMKWAEGVDLHCKHLHLELEHDKDDYLTDNYHCTVCGELVAANTRDPFQVV*
Ga0070700_10125702213300005441Corn, Switchgrass And Miscanthus RhizosphereMVSDKGVDIMMKAQAAALRMKWAEGEDLHCKHLHLELEHDKDDYLTDNYHCTVCGELVAANTRDPFQVV*
Ga0070707_10159034213300005468Corn, Switchgrass And Miscanthus RhizosphereMGVDIMTKAQAAALREKWAEGDNPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRDPFQV
Ga0070698_10115701723300005471Corn, Switchgrass And Miscanthus RhizosphereMGVDIMTKAQAAALREKWAEGENLPCRHLHLELEHNSNDYLTDNYHCTACGELVAANTRDPFQVI*
Ga0074213_10145623300005488SedimentMTKEQAAALRVQWTEGENPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRNPFQVI
Ga0070697_10155228413300005536Corn, Switchgrass And Miscanthus RhizosphereMVSDKGVDIMMKAQAAALRMKWAEGVDLHCKHLHLELEHDKDDYLTDNYHCTVCGELVAANTRDPFQV
Ga0070695_10130520113300005545Corn, Switchgrass And Miscanthus RhizosphereDKGVDIMMKAQAAALRMKWAEGVDLHCKHLHLELEHDKDDYLTDNYHCTVCGELVAANTRDPFQVV*
Ga0070704_10056872713300005549Corn, Switchgrass And Miscanthus RhizosphereVVLKSVDIMTKAQAAALRVKWEEEVDRPCKHLRLELEHNNYYLMDNYHCTACGELVAATTRDPFQVI*
Ga0066706_1139751223300005598SoilMTKAQAAALRVMWAEGVNRPCKHLHLELEHDNDHYLTDNYYCIACGVLVSDNTHDPFHVV
Ga0074478_1281909113300005827Sediment (Intertidal)MGVDIMTKAQAAALREKWAEGENLPCKHLHLELEHNNDDYLTDNYHCTACGELVAANTHDPFQVI*
Ga0074479_1040346513300005829Sediment (Intertidal)MTKSQAAALREKWAEGDNPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0074479_1064571613300005829Sediment (Intertidal)AALREKWAEGENLPCKHLHLELEHNNDDYLTDNYHCTACGELVAANTHDPFQVI*
Ga0074472_1004145523300005833Sediment (Intertidal)MTKEQAASLREKWAEGDNPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANT
Ga0074472_1006966113300005833Sediment (Intertidal)MGVGIMTKEQAASLREKWAEGDNPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRD
Ga0074472_1030372823300005833Sediment (Intertidal)MTKEQAAALREKWGEGENLPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0074472_1030406423300005833Sediment (Intertidal)LREKWAEGENQLCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVV*
Ga0074472_1034015543300005833Sediment (Intertidal)MMIHWTMVFDNEVDIMTKAQAVALRENWAEGESLPCRHLHLELEHNNDDYLTDNYHCTACGELVAANIPDLFQVV*
Ga0074472_1036401833300005833Sediment (Intertidal)MTKSQAAALREKWAEGDNSPCRHLHLELEHNNDNYLTDNYHCTACGELVAANTRDPFQVV
Ga0074472_1139767043300005833Sediment (Intertidal)MTKAQAAALREKWAEGDNPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFEVV
Ga0074472_1150945123300005833Sediment (Intertidal)MGVDIMTKAQAAALREKWEEGENPPCRHLHLELEHNNDDYLTDNYHCTACGELVA
Ga0074470_1125246123300005836Sediment (Intertidal)MTKAQAVALREKWAYGDNPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0073913_1006138513300005940SandMTKSQAAALREKWAEGDNPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTHDPFQVI
Ga0073926_1002106513300005943SandMGMDIMTKSQAAALREKWAEGDNPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI*
Ga0073917_102254913300006007SandMTKEQAAALREKWEEGENPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0075023_10001574723300006041WatershedsMIIGGTTVSDNGVDIMTKEQAAALRVQWAEGENPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRNPFQVI*
Ga0075023_10007550023300006041WatershedsMTKEQAASLREKWAEGDNPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVV
Ga0075026_10070988413300006057WatershedsMGVGIMTKAQAAALREKWAEGDNLPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI*
Ga0075026_10082989223300006057WatershedsMVSDKGVDIMMKAQAAALRVKWAEGVDLHCKHLHLELEHDKDDYLTDNYHCTVCGELVAANTRDPFQVV*
Ga0075425_10003822853300006854Populus RhizosphereMIINLTSVSDKGVDIMTKAQAAALRVKWAEGADLPCKHLHLELEHGNDDYMMDNYHCTACGELIAANTHDPFQVI*
Ga0066710_10309846423300009012Grasslands SoilMTKAQAAALRVMWAEGVNRPCKHLHLELEHDNDHYLTDNYYCIACGELVAA
Ga0105095_1004359623300009053Freshwater SedimentMEVDIMTKAQAAALREKWAEGDNPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI*
Ga0105106_1002493823300009078Freshwater SedimentMEVTIMTKAQAAALREKWAEGDNLPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI*
Ga0105106_1009276233300009078Freshwater SedimentTGQWGVDIMTKAQAAALREKWAEGDNPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI*
Ga0105046_1004871473300009084FreshwaterMEVDIMTKAQAAALREKWAEGDNPPCRHLHLELEHNNNNYLTDNYHCTACGELVAANTRDPFQVI*
Ga0115026_1024185523300009111WetlandLNSDLGQMEAVIMTKTQAAALREKWAEGDNPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI*
Ga0113563_1024316913300009167Freshwater WetlandsMEADIMTKAQAAALREKWAEGDNLPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI*
Ga0113563_1317975613300009167Freshwater WetlandsMEVTIMTKSQAAALREKWAEGDNPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRDPFQVI*
Ga0105101_1015506813300009171Freshwater SedimentMEVDIMTKAQAAALREKWAEGDNPPCRHLHLELEHNNDDYLTDNYHCTAWGELVAANTRDPFQVI
Ga0105242_1069689033300009176Miscanthus RhizosphereKAQAAALRMKWAEGVDLHCKHLHLELEHDKDDYLTDNYHCTVCGELVAANTRDPFQVV*
Ga0105164_1051218213300009777WastewaterMEVGIMTKAQAAALREKWAEGDNPPCRHLHLELEHNNNNYLTDNYHCTACGELVAANTRDPFQVI*
Ga0105060_10320213300009798Groundwater SandMGVDIMTKAQAAALREKWAEGENLPCKHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVV*
Ga0126382_1051843733300010047Tropical Forest SoilMTKTQAAALRMQWAEEAHQPCKHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0126382_1057297013300010047Tropical Forest SoilDIMTKAQADALRLKWAEGENSPCKHLHLELEHNNDEYLTDNYHCTACGELVAANTRDPFQVI*
Ga0134122_1037111423300010400Terrestrial SoilMVLDKGVDIMMKAQAAALRMKWAEGVDLHCKHLHLELEHDKDDYLTDNYHCTVCGELVAANTRDPFQVV*
Ga0134122_1233385913300010400Terrestrial SoilMPKAQATALREKWAEGDNPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRDPFQVI
Ga0137454_103794523300011406SoilAALRVKWAEGENRPCKHLHLELEHSNDDYLTDNYHCTACGELVAANTRNPFQVI*
Ga0137442_115652813300011414SoilMGVDIMTKEQAAALRVQWAEGENPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRNPFQVI*
Ga0137462_100173323300011421SoilVSDKGVDIMTKAQAAGLRVKWAEGEHRPCKHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI*
Ga0137455_104468323300011429SoilMNGETTVSDKGVDIMTKAQAAGLRVKWAEGEHRPCKHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI*
Ga0137447_103748633300012226SoilMEVDTMTKSQAAALREKWAEGDNPPCRHLHLELEHNSNDYLTDNYHCTACGELVAANTRDPFQVI*
Ga0137447_107406723300012226SoilMGVGIMTKEQAVALREKWAEGENLPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVV*
Ga0137447_110364813300012226SoilMGVDIMTKAQAAALREKWAEGENLPCKHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI*
Ga0157216_1021067413300012668Glacier Forefield SoilIMGVDIMTKAQAAALREKWAEGDNPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI*
Ga0126375_1003068523300012948Tropical Forest SoilMTKAQAAALRMKWAEGEDQPCKHLHLELEHGNDDYMTDNYHCTACGELVAANTRDPFQVI
Ga0126375_1184459013300012948Tropical Forest SoilMTKAQAAALRMKWAEGEDLPCKHLHLELEHGNDDYMTDNYHCTACGELVAANT
Ga0075344_101522623300014296Natural And Restored WetlandsMEVGIMTKAQAAALREKWAEGDNPPCRHLHLELEHDNDDYLMDNYHCTACGELVAANTRDPFQVI*
Ga0075352_112340723300014324Natural And Restored WetlandsMGRRYRITGVDIMTKAQAAALRAKWAEGEDLPCKHLHLELEHGNDDYMTDNYHCTACGELVAANTRDPFQVI*
Ga0137409_1007368213300015245Vadose Zone SoilMTKAQAAALCVKWAEGEDRPCKHLHLELEHSNDDYLTDNYHCTACGELVAANTRNPFQVI
Ga0163144_1001930663300015360Freshwater Microbial MatVEVDIMTKAQAAALREKWAEGDNPPCRHLHLELEHNNDNYLTDNYHCTACGELVAANTRDPFQVI*
Ga0163144_1016428543300015360Freshwater Microbial MatMEVAIMTKAQAAALREKWAEGDNPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRDPFQVI*
Ga0132258_1334064733300015371Arabidopsis RhizosphereVSDKGVDIMTKAQAAALRVKWAEGADLPCKHLHLELEHGNDDYMMDNYHCTACGELIAANTHDPFQVI*
Ga0180121_1001220853300017695Polar Desert SandMTKAQAAALREKWTEGDNPPCRHLHLELEHNNDNYLTDNYHCTACGELVAANTRDPFQVI
Ga0187786_1038695713300017944Tropical PeatlandMTKAQAAALRMKWTEGEDQPCKHLHLELEHGNDDYMTDNYHCTACGELVAANTRDPFQVI
Ga0184638_128444213300018052Groundwater SedimentAAALRVKWAEGEDRPCKHLHLELEHSNEDYLTDNYHCTACGELVAANTRNPFQVI
Ga0066667_1229331023300018433Grasslands SoilMTKAQAAALRVMWAEGVNRPCKHLHLELEHDNDHYLTDNYYCIACGELVAANTHDPFQVV
Ga0190270_1015333823300018469SoilMIEQRHWTMGGIMTKAQAAALREKWAEGENLPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0190270_1197127513300018469SoilQAAALRVKWAEGEDRPCKHMHLELEHDNDHYLTDNYHCTACGELVAANTRNPFQVI
Ga0190274_1287117323300018476SoilMTKAQAAALREKWAEGDNPPCRHLHLELEHNNNNYLTDNYHCTACGELVAANTRDPFQVI
Ga0187894_10000162513300019360Microbial Mat On RocksMTKAQAAALREKWAEGDNPPCRHLHLELEHDNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0173479_1087383023300019362SoilMEVGIMTKAQAAALREKWAEGDNPPCRHLHLELEHDNDDYLTDNYHCTACGELVAANTHDPFQVI
Ga0190264_1000661833300019377SoilMWLDHVIIGKEVIIMTKSQAAALREKWAYGDNPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRDPFQVI
Ga0187893_1003641023300019487Microbial Mat On RocksMTKAQAAALREKWAEGENLPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0193713_114088723300019882SoilMGVDIMTKEQAAALRVQWEEGENPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRNPFQVI
Ga0193711_104219113300019997SoilMGVGIMTKAQAAALREKWAEGDNPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRDPFQVI
Ga0163151_10000308593300020057Freshwater Microbial MatMTKAQAAALREKWAEGDNPPCRHLHLELEHNNDNYLTDNYHCTACGELVAANTRDPFQVI
Ga0163151_1005459133300020057Freshwater Microbial MatMTKSQAAALREKWAEGDNPPCRHLHLELEHNSNDYLTDNYHCTACGELVAANTRDPFQVI
Ga0163155_1016416723300020180Freshwater Microbial MatMTKSQAAALREKWAEGDNPPCRHLHLELEHNNNNYLTDNYHCTACGELVAANTRDPFQVI
Ga0163153_10000450113300020186Freshwater Microbial MatMTKSQAAALREKWAEGDNPSCRHLHLELEHNNNNYLTDNYHCTACGELVAANTRDPFQVI
Ga0206227_106847013300021063Deep Subsurface SedimentMGVDIMTKAQAAALREKWAEGENLPCKHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0226658_1016005533300022222Freshwater Microbial MatMVEQRYRTMEVAIMTKAQAAALREKWAEGDNPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRDPFQVI
Ga0226658_1042553513300022222Freshwater Microbial MatSQAAALREKWAEGDNPPCRHLHLELEHNNNNYLTDNYHCTACGELVAANTRDPFQVI
Ga0233391_100001033300024304Deep Subsurface SedimentMGVGIMTKEQAVALREKWAEGENLPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVV
Ga0209619_1034437023300025159SoilVDIMTKEQAAALRVQWAEGENPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRNPFQVI
Ga0209321_1010550633300025312SoilMTKEQAAALRVQWAEGENPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRNPFQVI
Ga0207670_1053862913300025936Switchgrass RhizosphereMTKSQAAALRVKWAEGEDLPCKHLHLELEHGNDDYMMDNYHCTACGELVAANTRDPFQVI
Ga0257165_108190723300026507SoilSYKGVDIMTKAQAAALCVKWAEGEDRPCKHLHLELEHSNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0209867_102013213300027393SandTIGVGVMTKSQAAALREKWAEGDNPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0209864_103976513300027547SandMGMDIMTKSQAAALREKWAEGDNPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0209592_109793023300027731Freshwater SedimentMEVDIMTKAQAAALREKWAEGDNPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0209811_1021662723300027821Surface SoilMVSDKGVDIMMKAQAAALRMKWAEGVDLHCKHLHLELEHDKDDYLTDNYHCTVCGELVAANTRDPFQVV
Ga0209253_1001374953300027900Freshwater Lake SedimentMTKAQAAALREKWAEGENLPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRDPFQVI
Ga0209048_1017990623300027902Freshwater Lake SedimentMGVDIMTKTQAAALREKWAEGENLPCKHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFEVV
Ga0209583_1001288533300027910WatershedsMIIGGTTVSDNGVDIMTKEQAAALRVQWAEGENPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRNPFQVI
Ga0209583_1014100523300027910WatershedsMTKEQAASLREKWAEGDNPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0209583_1017355713300027910WatershedsMVSDKGVDIMMKAQAAALRVKWAEGVDLHCKHLHLELEHDKDDYLTDNYHCTVCGELVAANTRDPFQVV
Ga0209583_1026020513300027910WatershedsMTKAQAAALREKWAEGENLPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVV
Ga0209069_1015939813300027915WatershedsVGIMTKAQAAALREKWAEGDNPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRNPFQVI
Ga0209705_1018871223300027979Freshwater SedimentQAAALREKWAEGDNLPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0209705_1022877023300027979Freshwater SedimentMTKAQAAALREKWAEGDNLPCRHLHLELEHNNDDYLTDNYHCTACGELVAAN
Ga0268265_1141596323300028380Switchgrass RhizosphereMEVGIMTKAQAAALREKWAEGDNPPCRHLHLELEHDNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0307505_1001385823300031455SoilMTKAQAAALREKWVEGENLPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0315290_1003310033300031834SedimentMGVGIMTKAQAAALREKWEEGENPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0315290_1006287343300031834SedimentMTKEQAAALRVQWAEGENPLCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRNPFQVI
Ga0315290_1008329913300031834SedimentMGVDIMTKEQAAALRVQWAEGENPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRNPFQVI
Ga0315290_1083862113300031834SedimentNMTKAQAAALREKWAEGENLPCKHLHLELEHNNDDYLTDNYHCTACGELVAANTHDPFQV
Ga0315280_1003870133300031862SedimentMGVDIMTKEQAAALRVQWAEGENPLCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRNPFQVI
Ga0315272_1015817033300032018SedimentMTKAQAAALREKWAEGENQPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVV
Ga0315281_10027650113300032163SedimentMGVDIMTKEQAAALREKWAEGENPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTREPFQVI
Ga0315281_1024306533300032163SedimentMGVDIMTKEQAAALRVQWAEGENPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRDPFQVI
Ga0315276_1224030613300032177SedimentLRYRIMGVGIMTKAQAAALREKWEEGENPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0307471_10141115823300032180Hardwood Forest SoilMIGGRTMVSDKGVDIMMKAQAAALRMKWAEGVDLHCKHLHLELEHDKDDYLTDNYHCTVCGELVAANTRDPFQVV
Ga0307472_10121045013300032205Hardwood Forest SoilGTSRYALCGPWAEGVDVLCLHLNLELEHSNDGYVTGHYHSTACGELVAAITSDLFQAA
Ga0315271_1013719913300032256SedimentEVDIMTKAQAAALREKWAEGENQPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVV
Ga0315270_1027829333300032275SedimentMTKAQAAALREKWAEGENQPCRHLHLELEHNNDDYLTDNYHCTACGELVAAN
Ga0315270_1032833323300032275SedimentMTKAQAAALREKWEEGENPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANAREPFQVI
Ga0315270_1050828213300032275SedimentMGADIMTKEQAAALRVQWAEGENPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANTRDPFQVI
Ga0315270_1107053313300032275SedimentMTKEQAAALRVQWAEGENPPCRHLHLELEHNNNDYLTDNYHCTACGELVAANT
Ga0335394_1052507723300032456FreshwaterMEVDIMTKAQAAALREKWAEGDNPPCRHLHLELEHNNNNYLTDNYHCTACGELVAANTRDPFQVI
Ga0326726_1000186423300033433Peat SoilMGVGIMTKAQAAALREKWAEGDNPPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0326726_1024036513300033433Peat SoilMTKAQAAALRGTWAEGENLPCRHLHLELEHSNDGYVTGHYHCTVCGELVAAFIPDLIQAA
Ga0370498_132259_110_2923300034155Untreated Peat SoilMTKSQAAALREKWAEGENLPCRHLHLELEHNNDDYLTDNYHCTACGELVAANTRDPFQVI
Ga0370498_171649_228_4103300034155Untreated Peat SoilMTKAQAAALRGTWAEGVDIPCLHLHLELEHSTDGYVTGHYHCTACGELVAAITPDLFQAA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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