Basic Information | |
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Family ID | F056189 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 138 |
Average Sequence Length | 93 residues |
Representative Sequence | QRATWPPSAAVRQRSMADITFSWSRLTCPALALRHAAPWSRKISATSSAGRDTAAGGYAGCGAFLLLLGFLRDCVSRSSGLSMLAIMPVATRV |
Number of Associated Samples | 126 |
Number of Associated Scaffolds | 138 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 28.26 % |
% of genes near scaffold ends (potentially truncated) | 68.12 % |
% of genes from short scaffolds (< 2000 bps) | 96.38 % |
Associated GOLD sequencing projects | 122 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.28 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (94.203 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.362 % of family members) |
Environment Ontology (ENVO) | Unclassified (29.710 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (58.696 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 41.32% β-sheet: 0.00% Coil/Unstructured: 58.68% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.28 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 138 Family Scaffolds |
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PF00589 | Phage_integrase | 67.39 |
PF13495 | Phage_int_SAM_4 | 19.57 |
PF13408 | Zn_ribbon_recom | 0.72 |
PF14319 | Zn_Tnp_IS91 | 0.72 |
PF03458 | Gly_transporter | 0.72 |
PF00496 | SBP_bac_5 | 0.72 |
PF04986 | Y2_Tnp | 0.72 |
PF02899 | Phage_int_SAM_1 | 0.72 |
PF08388 | GIIM | 0.72 |
PF04828 | GFA | 0.72 |
PF00078 | RVT_1 | 0.72 |
PF12833 | HTH_18 | 0.72 |
COG ID | Name | Functional Category | % Frequency in 138 Family Scaffolds |
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COG2860 | Uncharacterized membrane protein YeiH | Function unknown [S] | 0.72 |
COG3791 | Uncharacterized conserved protein | Function unknown [S] | 0.72 |
COG4973 | Site-specific recombinase XerC | Replication, recombination and repair [L] | 0.72 |
COG4974 | Site-specific recombinase XerD | Replication, recombination and repair [L] | 0.72 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 94.20 % |
Unclassified | root | N/A | 5.80 % |
Visualization |
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Powered by ApexCharts |
Scaffold | Taxonomy | Length | IMG/M Link |
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3300000651|AP72_2010_repI_A10DRAFT_1024891 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 765 | Open in IMG/M |
3300001081|JGI12662J13196_1003556 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1195 | Open in IMG/M |
3300001169|JGI12661J13543_100601 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1096 | Open in IMG/M |
3300001369|JGI12701J14581_1006946 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 744 | Open in IMG/M |
3300001418|JGI20188J14859_1009441 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1232 | Open in IMG/M |
3300001527|A3513AW1_1000203 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 604 | Open in IMG/M |
3300002906|JGI25614J43888_10047226 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1316 | Open in IMG/M |
3300002910|JGI25615J43890_1013523 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1329 | Open in IMG/M |
3300003218|JGI26339J46600_10082868 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 806 | Open in IMG/M |
3300004091|Ga0062387_101545004 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 534 | Open in IMG/M |
3300004114|Ga0062593_100702122 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 987 | Open in IMG/M |
3300004268|Ga0066398_10021938 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1083 | Open in IMG/M |
3300004463|Ga0063356_102101256 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 857 | Open in IMG/M |
3300004479|Ga0062595_100228154 | All Organisms → cellular organisms → Bacteria | 1184 | Open in IMG/M |
3300004633|Ga0066395_10714026 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 596 | Open in IMG/M |
3300005166|Ga0066674_10486347 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 558 | Open in IMG/M |
3300005179|Ga0066684_10535956 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 785 | Open in IMG/M |
3300005330|Ga0070690_101403432 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 562 | Open in IMG/M |
3300005333|Ga0070677_10142977 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1105 | Open in IMG/M |
3300005354|Ga0070675_101836277 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 559 | Open in IMG/M |
3300005364|Ga0070673_100493332 | All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium BMS3Abin11 | 1107 | Open in IMG/M |
3300005406|Ga0070703_10278137 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. | 690 | Open in IMG/M |
3300005444|Ga0070694_100237873 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1372 | Open in IMG/M |
3300005535|Ga0070684_101724973 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 591 | Open in IMG/M |
3300005557|Ga0066704_10824792 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 576 | Open in IMG/M |
3300005574|Ga0066694_10562397 | Not Available | 531 | Open in IMG/M |
3300005616|Ga0068852_102006597 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 601 | Open in IMG/M |
3300005712|Ga0070764_10303581 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 922 | Open in IMG/M |
3300005764|Ga0066903_105237053 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 686 | Open in IMG/M |
3300006050|Ga0075028_100665998 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 624 | Open in IMG/M |
3300006580|Ga0074049_10024593 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1238 | Open in IMG/M |
3300006791|Ga0066653_10225990 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 952 | Open in IMG/M |
3300006871|Ga0075434_100334145 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1536 | Open in IMG/M |
3300006918|Ga0079216_11780650 | Not Available | 528 | Open in IMG/M |
3300006953|Ga0074063_10043545 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 768 | Open in IMG/M |
3300006969|Ga0075419_11380665 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 525 | Open in IMG/M |
3300016294|Ga0182041_10252857 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1435 | Open in IMG/M |
3300016319|Ga0182033_11324391 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 647 | Open in IMG/M |
3300016341|Ga0182035_10647441 | All Organisms → cellular organisms → Bacteria | 917 | Open in IMG/M |
3300016341|Ga0182035_11549471 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 597 | Open in IMG/M |
3300016371|Ga0182034_11784496 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 542 | Open in IMG/M |
3300016387|Ga0182040_10432790 | Not Available | 1039 | Open in IMG/M |
3300017823|Ga0187818_10536437 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 527 | Open in IMG/M |
3300017933|Ga0187801_10446739 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 542 | Open in IMG/M |
3300017959|Ga0187779_11053147 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 566 | Open in IMG/M |
3300017961|Ga0187778_10028494 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 3412 | Open in IMG/M |
3300017961|Ga0187778_10671884 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 699 | Open in IMG/M |
3300017972|Ga0187781_11436103 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 511 | Open in IMG/M |
3300017975|Ga0187782_11694409 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 500 | Open in IMG/M |
3300018028|Ga0184608_10438296 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 563 | Open in IMG/M |
3300018032|Ga0187788_10080337 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1152 | Open in IMG/M |
3300018062|Ga0187784_10929708 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 692 | Open in IMG/M |
3300018086|Ga0187769_10662748 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 789 | Open in IMG/M |
3300018433|Ga0066667_10515343 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 987 | Open in IMG/M |
3300018468|Ga0066662_10797373 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 916 | Open in IMG/M |
3300018482|Ga0066669_11576887 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 599 | Open in IMG/M |
3300019789|Ga0137408_1059609 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 674 | Open in IMG/M |
3300020140|Ga0179590_1143438 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 651 | Open in IMG/M |
3300020579|Ga0210407_10618468 | Not Available | 843 | Open in IMG/M |
3300020581|Ga0210399_10319016 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1297 | Open in IMG/M |
3300020581|Ga0210399_11212739 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 598 | Open in IMG/M |
3300021178|Ga0210408_10951826 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 666 | Open in IMG/M |
3300021384|Ga0213876_10000982 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 18733 | Open in IMG/M |
3300021384|Ga0213876_10542567 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 619 | Open in IMG/M |
3300021404|Ga0210389_10627951 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 843 | Open in IMG/M |
3300021404|Ga0210389_11449474 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AS23.2 | 523 | Open in IMG/M |
3300021406|Ga0210386_11133749 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 663 | Open in IMG/M |
3300021478|Ga0210402_11968017 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 510 | Open in IMG/M |
3300021560|Ga0126371_12064057 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 686 | Open in IMG/M |
3300022214|Ga0224505_10210418 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 743 | Open in IMG/M |
3300025898|Ga0207692_10238751 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1085 | Open in IMG/M |
3300025911|Ga0207654_10201871 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1309 | Open in IMG/M |
3300025935|Ga0207709_10446045 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 999 | Open in IMG/M |
3300025945|Ga0207679_11370272 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 649 | Open in IMG/M |
3300025961|Ga0207712_11568391 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 590 | Open in IMG/M |
3300026095|Ga0207676_10601191 | Not Available | 1056 | Open in IMG/M |
3300026351|Ga0257170_1058500 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 539 | Open in IMG/M |
3300026489|Ga0257160_1053844 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 697 | Open in IMG/M |
3300026489|Ga0257160_1108254 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 502 | Open in IMG/M |
3300026536|Ga0209058_1137811 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1175 | Open in IMG/M |
3300026824|Ga0207723_115163 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 594 | Open in IMG/M |
3300026880|Ga0209623_1001480 | Not Available | 1182 | Open in IMG/M |
3300026895|Ga0207758_1026224 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 551 | Open in IMG/M |
3300027019|Ga0207857_1071901 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 505 | Open in IMG/M |
3300027039|Ga0207855_1013593 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales | 1135 | Open in IMG/M |
3300027045|Ga0207726_1031553 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 756 | Open in IMG/M |
3300027058|Ga0209111_1004567 | Not Available | 1341 | Open in IMG/M |
3300027073|Ga0208366_1005966 | Not Available | 1219 | Open in IMG/M |
3300027119|Ga0209522_1033221 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 632 | Open in IMG/M |
3300027161|Ga0208368_101502 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1036 | Open in IMG/M |
3300027330|Ga0207777_1025850 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1100 | Open in IMG/M |
3300027605|Ga0209329_1086261 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 683 | Open in IMG/M |
3300027654|Ga0209799_1030672 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1191 | Open in IMG/M |
3300027655|Ga0209388_1204607 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 546 | Open in IMG/M |
3300027684|Ga0209626_1056121 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 989 | Open in IMG/M |
3300027703|Ga0207862_1098307 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 880 | Open in IMG/M |
3300027812|Ga0209656_10291478 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 757 | Open in IMG/M |
3300027824|Ga0209040_10530527 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 516 | Open in IMG/M |
(restricted) 3300027856|Ga0255054_10612765 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 526 | Open in IMG/M |
3300027874|Ga0209465_10497121 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 609 | Open in IMG/M |
3300027903|Ga0209488_10740721 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 701 | Open in IMG/M |
3300028047|Ga0209526_10595155 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 709 | Open in IMG/M |
3300029636|Ga0222749_10366698 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 757 | Open in IMG/M |
3300030916|Ga0075386_10000412 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 518 | Open in IMG/M |
3300031543|Ga0318516_10045886 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 2365 | Open in IMG/M |
3300031545|Ga0318541_10518426 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 667 | Open in IMG/M |
3300031545|Ga0318541_10619230 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 605 | Open in IMG/M |
3300031547|Ga0310887_10158664 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 1193 | Open in IMG/M |
3300031572|Ga0318515_10376896 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 760 | Open in IMG/M |
3300031573|Ga0310915_10255459 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1233 | Open in IMG/M |
3300031573|Ga0310915_10574404 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 799 | Open in IMG/M |
3300031713|Ga0318496_10831783 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 509 | Open in IMG/M |
3300031719|Ga0306917_10269142 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1310 | Open in IMG/M |
3300031740|Ga0307468_102000784 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 555 | Open in IMG/M |
3300031744|Ga0306918_10046206 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 2865 | Open in IMG/M |
3300031744|Ga0306918_11059184 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 629 | Open in IMG/M |
3300031744|Ga0306918_11114941 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 611 | Open in IMG/M |
3300031747|Ga0318502_10319668 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 915 | Open in IMG/M |
3300031777|Ga0318543_10499431 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 545 | Open in IMG/M |
3300031778|Ga0318498_10358078 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 651 | Open in IMG/M |
3300031782|Ga0318552_10645282 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 540 | Open in IMG/M |
3300031792|Ga0318529_10574686 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 523 | Open in IMG/M |
3300031805|Ga0318497_10674870 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 579 | Open in IMG/M |
3300031833|Ga0310917_10647877 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 716 | Open in IMG/M |
3300031897|Ga0318520_10351885 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 894 | Open in IMG/M |
3300031941|Ga0310912_10760547 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 749 | Open in IMG/M |
3300031941|Ga0310912_10841929 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 707 | Open in IMG/M |
3300031962|Ga0307479_11691144 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 586 | Open in IMG/M |
3300032001|Ga0306922_10296620 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSPM299 | 1736 | Open in IMG/M |
3300032035|Ga0310911_10148610 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1317 | Open in IMG/M |
3300032035|Ga0310911_10678495 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 597 | Open in IMG/M |
3300032068|Ga0318553_10349320 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 774 | Open in IMG/M |
3300032076|Ga0306924_10999631 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 918 | Open in IMG/M |
3300032094|Ga0318540_10317990 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 751 | Open in IMG/M |
3300032174|Ga0307470_10911057 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 691 | Open in IMG/M |
3300032205|Ga0307472_101785955 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 610 | Open in IMG/M |
3300032261|Ga0306920_100285447 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 2460 | Open in IMG/M |
3300033290|Ga0318519_10684038 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 626 | Open in IMG/M |
Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Habitat | Taxonomy | Distribution |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 25.36% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 9.42% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 8.70% |
Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 7.97% |
Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 5.80% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 4.35% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 3.62% |
Bog Forest Soil | Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil | 2.90% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 2.90% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.90% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 2.17% |
Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 1.45% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.45% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.45% |
Plant Roots | Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots | 1.45% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 1.45% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 1.45% |
Seawater | Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater | 0.72% |
Sediment | Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment | 0.72% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.72% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 0.72% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 0.72% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.72% |
Arctic Peat Soil | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil | 0.72% |
Permafrost | Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost | 0.72% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 0.72% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 0.72% |
Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil | 0.72% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.72% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.72% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.72% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.72% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 0.72% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.72% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.72% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.72% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 0.72% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 0.72% |
Visualization |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Taxon OID | Sample Name | Habitat Type | IMG/M Link |
---|---|---|---|
3300000651 | Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10 | Environmental | Open in IMG/M |
3300001081 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 | Environmental | Open in IMG/M |
3300001169 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 | Environmental | Open in IMG/M |
3300001369 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 | Environmental | Open in IMG/M |
3300001418 | Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 | Environmental | Open in IMG/M |
3300001527 | Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-5cm-13A)- 1 week illumina | Environmental | Open in IMG/M |
3300002906 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm | Environmental | Open in IMG/M |
3300002910 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm | Environmental | Open in IMG/M |
3300003218 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 | Environmental | Open in IMG/M |
3300004091 | Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3 | Environmental | Open in IMG/M |
3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
3300004268 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio | Environmental | Open in IMG/M |
3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300004479 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs | Environmental | Open in IMG/M |
3300004633 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio | Environmental | Open in IMG/M |
3300005166 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 | Environmental | Open in IMG/M |
3300005179 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 | Environmental | Open in IMG/M |
3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Environmental | Open in IMG/M |
3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Host-Associated | Open in IMG/M |
3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Host-Associated | Open in IMG/M |
3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Host-Associated | Open in IMG/M |
3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Environmental | Open in IMG/M |
3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Environmental | Open in IMG/M |
3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Environmental | Open in IMG/M |
3300005557 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 | Environmental | Open in IMG/M |
3300005574 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 | Environmental | Open in IMG/M |
3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Host-Associated | Open in IMG/M |
3300005712 | Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 | Environmental | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300006050 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014 | Environmental | Open in IMG/M |
3300006580 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006791 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 | Environmental | Open in IMG/M |
3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
3300006918 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 | Environmental | Open in IMG/M |
3300006953 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
3300016294 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 | Environmental | Open in IMG/M |
3300016319 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H | Environmental | Open in IMG/M |
3300016341 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 | Environmental | Open in IMG/M |
3300016371 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 | Environmental | Open in IMG/M |
3300016387 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 | Environmental | Open in IMG/M |
3300017823 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3 | Environmental | Open in IMG/M |
3300017933 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1 | Environmental | Open in IMG/M |
3300017959 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG | Environmental | Open in IMG/M |
3300017961 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG | Environmental | Open in IMG/M |
3300017972 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG | Environmental | Open in IMG/M |
3300017975 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG | Environmental | Open in IMG/M |
3300018028 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex | Environmental | Open in IMG/M |
3300018032 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG | Environmental | Open in IMG/M |
3300018062 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG | Environmental | Open in IMG/M |
3300018086 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG | Environmental | Open in IMG/M |
3300018433 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116 | Environmental | Open in IMG/M |
3300018468 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111 | Environmental | Open in IMG/M |
3300018482 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118 | Environmental | Open in IMG/M |
3300019789 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction) | Environmental | Open in IMG/M |
3300020140 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300020579 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M | Environmental | Open in IMG/M |
3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
3300021178 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M | Environmental | Open in IMG/M |
3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Host-Associated | Open in IMG/M |
3300021404 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O | Environmental | Open in IMG/M |
3300021406 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O | Environmental | Open in IMG/M |
3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
3300022214 | Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_4_1 | Environmental | Open in IMG/M |
3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) | Environmental | Open in IMG/M |
3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026351 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B | Environmental | Open in IMG/M |
3300026489 | Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A | Environmental | Open in IMG/M |
3300026536 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes) | Environmental | Open in IMG/M |
3300026824 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 27 (SPAdes) | Environmental | Open in IMG/M |
3300026880 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M1 (SPAdes) | Environmental | Open in IMG/M |
3300026895 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 12 (SPAdes) | Environmental | Open in IMG/M |
3300027019 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 22 (SPAdes) | Environmental | Open in IMG/M |
3300027039 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 14 (SPAdes) | Environmental | Open in IMG/M |
3300027045 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes) | Environmental | Open in IMG/M |
3300027058 | Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O1 (SPAdes) | Environmental | Open in IMG/M |
3300027073 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF010 (SPAdes) | Environmental | Open in IMG/M |
3300027119 | Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O2 (SPAdes) | Environmental | Open in IMG/M |
3300027161 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF032 (SPAdes) | Environmental | Open in IMG/M |
3300027330 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes) | Environmental | Open in IMG/M |
3300027605 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes) | Environmental | Open in IMG/M |
3300027654 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes) | Environmental | Open in IMG/M |
3300027655 | Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes) | Environmental | Open in IMG/M |
3300027684 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes) | Environmental | Open in IMG/M |
3300027703 | Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes) | Environmental | Open in IMG/M |
3300027812 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes) | Environmental | Open in IMG/M |
3300027824 | Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes) | Environmental | Open in IMG/M |
3300027856 (restricted) | Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_23 | Environmental | Open in IMG/M |
3300027874 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes) | Environmental | Open in IMG/M |
3300027903 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes) | Environmental | Open in IMG/M |
3300028047 | Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes) | Environmental | Open in IMG/M |
3300029636 | Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300030916 | Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
3300031543 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20 | Environmental | Open in IMG/M |
3300031545 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26 | Environmental | Open in IMG/M |
3300031547 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4 | Environmental | Open in IMG/M |
3300031572 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19 | Environmental | Open in IMG/M |
3300031573 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111 | Environmental | Open in IMG/M |
3300031713 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22 | Environmental | Open in IMG/M |
3300031719 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2) | Environmental | Open in IMG/M |
3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
3300031744 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2) | Environmental | Open in IMG/M |
3300031747 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22 | Environmental | Open in IMG/M |
3300031777 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24 | Environmental | Open in IMG/M |
3300031778 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24 | Environmental | Open in IMG/M |
3300031782 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20 | Environmental | Open in IMG/M |
3300031792 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23 | Environmental | Open in IMG/M |
3300031805 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23 | Environmental | Open in IMG/M |
3300031833 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178 | Environmental | Open in IMG/M |
3300031897 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16 | Environmental | Open in IMG/M |
3300031941 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080 | Environmental | Open in IMG/M |
3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
3300032001 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2) | Environmental | Open in IMG/M |
3300032035 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170 | Environmental | Open in IMG/M |
3300032068 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21 | Environmental | Open in IMG/M |
3300032076 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2) | Environmental | Open in IMG/M |
3300032094 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25 | Environmental | Open in IMG/M |
3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
3300032261 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2) | Environmental | Open in IMG/M |
3300033290 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
AP72_2010_repI_A10DRAFT_10248911 | 3300000651 | Forest Soil | RQFSIADITLSWPKLTWLALAWRHAGPWPRKISATSNTGRDMAAGGYAGGGSFLFFLGLRGNDNRSSGLSMAAIMPVATRV* |
JGI12662J13196_10035561 | 3300001081 | Forest Soil | MTVCEHFSQRSTWPPSAAVRQRSMADITLICSRLTWPALAERHAAPWSRKISATSSFGRDTAAGYAGSCTSLRFLAVFLGRASRSSGLSTAEIKPVATWR* |
JGI12661J13543_1006012 | 3300001169 | Forest Soil | SIALITFIWSRLTCPALALRHAAPWSRKMSATSSTGRDTAVSRYAGSWAFLLLLGFLRGCDSRSSGLSMPAIMPVATRV* |
JGI12701J14581_10069462 | 3300001369 | Forest Soil | MADITFNWSRLTCPALARRHAAPWPRKISATSSAGRDTAPGRYAGDFLGFLRGCESRSSGLSMAAIMPVATRV* |
JGI20188J14859_10094411 | 3300001418 | Arctic Peat Soil | VWAQVSFSQRATWPPSAAVRQRSIALMTFNWPRLTWPALARRHVAPWSRKISATSSAGRDTAPGRYAGGGSFLLFLGLLRGCDSRSSGLSIAAIMPVATRV* |
A3513AW1_10002031 | 3300001527 | Permafrost | ATWPPSAAVRQRSIALMTFNWPRLTWPALARRHVAPWSRKISATSSAGRDTAPGRYAGGGSFLLFLGLLRGCDSRSSGLSIAAIMPVATRV* |
JGI25614J43888_100472262 | 3300002906 | Grasslands Soil | MRVCEHFSQRATWPPSAAVRQRSMADITFIWSRLTCPALTKRHAAPWSRKISATSSAGRDMTAGGYASGRSSLRFLGFLRGCASRSSGLSTLAIMPVATRV* |
JGI25615J43890_10135233 | 3300002910 | Grasslands Soil | AAVRQFSIADITLSWPRLTWPALAWRHAGPWPRKISATSNAGRGKAVSRYAGGWSFRLLGFLRGRDSRSSGLSMPAIMPVATRV* |
JGI26339J46600_100828682 | 3300003218 | Bog Forest Soil | MIVYAQPSQRATWPPSAAVRQRSIALITFIWSRLTWPALALRHAAPWSRKISATSSNGRDIAAGGYAGSGSFRLVLGFLRGSASRSSGLSMFAIMPVATRV* |
Ga0062387_1015450042 | 3300004091 | Bog Forest Soil | ADITFIWSRLTCSALALRHVAPWSRKISATSNTGRGTAAGGYAGSGSFRLCLGFLRGCDNRSSGLSTPAIMPVATRV* |
Ga0062593_1007021221 | 3300004114 | Soil | ATWPPSATVRQRSMADITFNWSRLTRPALARRQAAPWPRKISATSSAGRDTAAGRYAGGWSFLLLPGFWRGCDSRSSGLSMAAIMPVATRV* |
Ga0066398_100219381 | 3300004268 | Tropical Forest Soil | TVLAQFSQRATWPPSAIVRQRSMADITFSWSRLTCPALALRHAAPWSRKISATSNAGRGTAAGGYAGDGSFRLFLGFLRGCDSRSSGLSTPAIMPVATRV* |
Ga0063356_1021012562 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MADITFNWSRLTRPALARRQAAPWPRKISATSSAGRDTAAGRYAGGWSFLLLPGFWRGCDSRSSGLSMAAIMPVATRV* |
Ga0062595_1002281542 | 3300004479 | Soil | PSAAVRQRSIADITFIWSRLTWPALAARHAGPWLRKISATSNVGPDKAAGGYAGGWSFSPVSGVLQGFLPGFFLRGRDSRSSGLSIFAIMPVATWV* |
Ga0066395_107140262 | 3300004633 | Tropical Forest Soil | AVRQRSIALITFSWSRLTWPALTERHAAPLSRKISATSSAGRDTAVDGYAGCRAFLLTFGFLRGCVSRSSGLSILAIMPVATRV* |
Ga0066674_104863471 | 3300005166 | Soil | MWVCEHFSQRATWPPSAAVRQPSIALMTFIWPRLTWPALARRHAAPWSRKISATSSTGRDTTVGRYAGGWTVWFVVRLFLGFFLRGCDSRSSGLSILAIMPVATRV* |
Ga0066684_105359561 | 3300005179 | Soil | AQSSQRATWPPSATVRQRSMADITFSWSRLTCPALALRHAAPWSRKISATSNAGRGTAAGGYAGSGSSRLFLRFLRGCDSRSSGLSTPAIMPVATRV* |
Ga0070690_1014034321 | 3300005330 | Switchgrass Rhizosphere | PPSAAVRQRSMADITFNWSRLTWPALAERHAAPWSRRISATSSAGRDTAVGGYAGCRAFLLTFGFLRGCVSRSSGLSILAIMPVATRV* |
Ga0070677_101429771 | 3300005333 | Miscanthus Rhizosphere | MTVCAQSSQRATWPPSATVRQRSMADITFNWSRLTRPALARRQAAPWPRKISATSSAGRDTAAGRYAGGWSFLLLPGFWRGCDSRSSGLSMAAIMPVATRV* |
Ga0070675_1018362771 | 3300005354 | Miscanthus Rhizosphere | RQRSIALITFSWSRLMWPTLALRHAAPWSRKISATSNPGRDTVGGYAAVSCLLLLGFLRRCDSKSRGLSTLAIMPVATRV* |
Ga0070673_1004933321 | 3300005364 | Switchgrass Rhizosphere | MADITFNWSRLTWPALAERHAAPWSRRISATSSAGRDTAVGGYAGCRAFLLTFGFLRGCVSR |
Ga0070703_102781373 | 3300005406 | Corn, Switchgrass And Miscanthus Rhizosphere | SQRATWPPSATVRQRSMADITFNWSRLTRPALARRQAAPWPRKISATSSAGRDTAAGRYAGGWSFLLFLGFLRGCDSRSSGLSMAAIMPVATRV* |
Ga0070694_1002378732 | 3300005444 | Corn, Switchgrass And Miscanthus Rhizosphere | VCAQSSQRATWPPSATVRQRSMADITFNWSRLTRPALARRQAAPWPRKISATSSAGRDTAAGRYAGGWSFLLLPGFWRGCDSRSSGLSMAAIMPVATRV* |
Ga0070684_1017249731 | 3300005535 | Corn Rhizosphere | RQRSIALITFSWSRLMWPTLALRHAAPWSRKIYATSNPGRDTVGGYAAVSCLLLLGFLRRCDSKSRGLSTLAIMPVATRV* |
Ga0066704_108247922 | 3300005557 | Soil | VRQRSMADITFIWSRLTCPALARRHAAPWSRKISATSNAGRGTAAGGYAGSGFFRLFLGFLRGCESRSSGLSTPAIMPVATRV* |
Ga0066694_105623971 | 3300005574 | Soil | ALMTFIWPRLTGPALARRHAAPSRKISATSSTGRDTTVGRYAGGWTVWFVVRLFLGFFLRGCDSRSSGLSILAIMPVATRV* |
Ga0068852_1020065971 | 3300005616 | Corn Rhizosphere | TVRQRSMADITFNWSRLTCPALARRQAAPWPRKISATSSAGRDTAAGRYAGGWSFLLLPGFWRGCDSRSSGLSMAAIMPVATRV* |
Ga0070764_103035811 | 3300005712 | Soil | MMVCEHFSQRSTCPPSAAVRQRSIADITFNWSRLTWPALAARHAAPWPRKISATSSFGRDTAAGYAGGGSVLLASVLVCGAFCCGFLGFLRGCASMSSGLLMLAIMPVATRV* |
Ga0066903_1052370532 | 3300005764 | Tropical Forest Soil | MSVCAQSSQRATWPPSAAVRQRSMADITFNWSRLTWPELALRHAAPWSRKISATSRTGRRTAGSGYAGGWTSVLLFSAFPDLLRFGCDSRSSRLLTAEIMPAAT* |
Ga0075028_1006659982 | 3300006050 | Watersheds | WPPRAAVRQSSIADMTFSWPRLTWPALAARHAAPWPRKISATSKAGRDTIAGGYAGGESVSSVAGFLGGFLLLFRRDCDSRSSGLSTRAIMPVATRV* |
Ga0074049_100245931 | 3300006580 | Soil | MMVCEHFSQRSTCPPSAAVRQRSMADITFNWSRLTCPALAERHAAPWSRKISAASSFGRDTAAGYAGGCTSLRLFSAFLGLLCFGRASRSSGLSTAEIMP |
Ga0066653_102259901 | 3300006791 | Soil | VCEHFSQRATWPPSAAVRQRSMADITFNWSRLTWPALAARHAAPWSRKISATSSAGRDTVAGGYAGGGSFLLLLGFLPGFNSRSSGLSMLEIIPVATRVYRAVVSNLS* |
Ga0075434_1003341451 | 3300006871 | Populus Rhizosphere | AVRQRSIADITLSWSRLTWLALACRHAGPWSRKMSATSSTGRDTGAGGYAGAGPFSSGSGFLPGFLIGFLRGWDSKSSGLLTFAIMPVATRA* |
Ga0079216_117806501 | 3300006918 | Agricultural Soil | MSVCAQSSQRATCPPRAAVRQRSIADITFNWSRLTCPALPERHAAPWSRKISATSNAGRDTAAGGYACGFLFLLLLRFLRGCDNRSSGLSMAEIMPVATRT* |
Ga0074063_100435451 | 3300006953 | Soil | MTVCEQFSQRSTCPPSAAVRQRSMADITFNWSRLTCPALAERHAAPWSRKISATSSFGRDTAAGYAGGCTSLRFFSAFLGLLCFGRANRSSGLSTAEITPVATWR* |
Ga0075419_113806652 | 3300006969 | Populus Rhizosphere | VRQRSMADITFNWSKLMCPALAFRHAAPWSRKISATSSTGRDTAASRYAGGGSFLLFLGFLRGCDSRSSGLSTLAIMPVATRV* |
Ga0182041_102528573 | 3300016294 | Soil | ADITLSWPKLTWLALAWRHAGPWPRKISATSNTGRDMTADGYAGGGSFLFFLGLRGNDSRSSGLSIAAITPVATRV |
Ga0182033_113243911 | 3300016319 | Soil | SAAVRQRSMALITFSCSRLTWPVLALRHAAPWSRKIPATSNAGRDTAVGGYAGGGSFRFFLGFLRGCDSRSSGLSMPAIIPVATRV |
Ga0182035_106474413 | 3300016341 | Soil | MTVCAQSSQRATWPPSAAVRQCSIALITFIWSRLTCAALALRHAAPWSRKISATSSTGRDTAVSHYAGSWAFLLLLGFLRGNDSRSSGLSMPAIRPVATRRSAPWCLICRDPEALG |
Ga0182035_115494712 | 3300016341 | Soil | VCEQFSQRSTWPPSAAVRQRSMADITFNWSRLMRPALAERHAAPWSRKISATSSFGRNIAAGGYAGGCSVVVVSALGLRVLCCGFLGFLRGCPSRSSGLSILAIMPVATRV |
Ga0182034_117844962 | 3300016371 | Soil | MSVCEHFSQRATWPPSAAVRQRSMADITFNWSRLMCPALAARHAAPWSRKISATSRAGRDTVVGCYAGGRSSLCFLGFLQGFDNRSSGLSMLAIMPV |
Ga0182040_104327901 | 3300016387 | Soil | MTVCAQSSQRATWPPSAAVWHCSIALITFIWSRLTCAALALRHAAPWSRKISATSSTGRDTAVSRYAGSWAFLLLLGFLRGNDSRSSGLSMPAIRPVATRV |
Ga0187818_105364372 | 3300017823 | Freshwater Sediment | SAAVRQRSMADITFNWSRLTWPVLALRHAAPRSRKISATSSVGRDMAGGRYAVGCSLLFLLGLLRGSDSRSSGLSMPAIMPVATRV |
Ga0187801_104467391 | 3300017933 | Freshwater Sediment | ITFNWSRLTWPALARRHAAPWSRKISATSSAGRDMAAGGYAGCGALLLLLGLLRDCVSRSSGLSMLAIMPVATRV |
Ga0187779_110531471 | 3300017959 | Tropical Peatland | MSVCEHFSQRATCPPSAAVRQRSMADITFIWARLTCPALARRHAAPWSRKISATSNAGRGTVAGCYAGGGSFLFFLGLLRGCDSRSSGLLMPAIMPVATRA |
Ga0187778_100284941 | 3300017961 | Tropical Peatland | MSVCEHFSQRATCPPSAAVRQRSIAFITFIWSRLTWLALALRHAAPWSRKISATSSAGRDTAADRYAGGWSLLLLLELLRGCDSRSSGLSIAAIMPVATRV |
Ga0187778_106718842 | 3300017961 | Tropical Peatland | SQRATCPPSAAVRQRSIALITFNWSRLTWPALAVRHAAPWSRKISATSSAGRDTATGGYAGGGSFLPSPGLLPGALPDFLPGFLRGSDSRSSGLLMFAIMSVATRV |
Ga0187781_114361032 | 3300017972 | Tropical Peatland | PPSAVVRQRSMADITLSCSRLTWPALADRHAAGWSRKISATSSAARDTAVGGYAGGGAFPFFDFLRDCDSRSSGLSMLAIMPVATRV |
Ga0187782_116944091 | 3300017975 | Tropical Peatland | RATWPPSAAVRQRSMADITFIWSRLTCPALALRHAAPWSRKISATSNAGRGTAAGYDTGVGSFRLFLGCLRGCESRSSGLSMLAIMPVATRV |
Ga0184608_104382961 | 3300018028 | Groundwater Sediment | IALMTFIWSRLTCPALALRHAAPWSRKISATSSAGRDMAAGGYAGGGSFLFFLGLLRGRDSKSSGLSIRAIMPVATRV |
Ga0187788_100803373 | 3300018032 | Tropical Peatland | FATRDMAAERGCAARSIALITFIWSRLTWPALALRHAAPWSRKISATSSNGRDIAAGGYAGSGSFRLVLGFLRGSASRSSGLSMFAIMPVATRV |
Ga0187784_109297082 | 3300018062 | Tropical Peatland | VCAHFSQRRTCPPSATVRQFSIADITLSWSRLTCPALAERHAGPWSRKISATSSAGRDTAASTYAGGRSSSSFFFGVLLLFGFLLGFDS |
Ga0187769_106627481 | 3300018086 | Tropical Peatland | MSVCEHFSQRATCPPSAAVRQRSIAFITFSWSRLTWLALALRHAAPWSRKISASSSAGRDTAADRYAGGWWFLLLLEFLRGCDSRSSGLSIAAIMPVATRV |
Ga0066667_105153432 | 3300018433 | Grasslands Soil | MIVCEHFSQRATWPPSAAVRQRSMADITFNWSRLTWPALAARHAAPWSRKISATSSAGRDTVAGGYAGGGSFLLLLGFLPGFNSRSSGLSMLEIIPVATRVYRAVVSNLS |
Ga0066662_107973732 | 3300018468 | Grasslands Soil | MSVCEQSSQRATWPPSAAVRQRSMADITFNWSRLTWPALAARHAAPWSRKISATSSAGRDTVAGGYAGGGSFLLLLGFLPGFNSRSSGLSMLEIIPVATRVYRAVVSNLS |
Ga0066669_115768872 | 3300018482 | Grasslands Soil | WPPSATVRQRAMADITFSWSRLTCPALALRHAAPWSRKISATSNAGRSTAAGGYAGDEAFRLFLGFLRGCDSRSSGLSTPAIMPVATRV |
Ga0137408_10596091 | 3300019789 | Vadose Zone Soil | SIALTVRQPSIALMTFIWPRLTWPALARRHAAPWSRKISATSSTGRDTTVGRYAGGWTVWFVVRLFLGFFLRGCDTRSSGLSILAIMPVATRV |
Ga0179590_11434382 | 3300020140 | Vadose Zone Soil | ATVRQRSMADITFIWSRLTCPALALRHAAPWSRKISATSNAGRGTAAGGYAGSGSFRLFLGFLRGCDSRSSGLSTLAIMPVATRV |
Ga0210407_106184681 | 3300020579 | Soil | TWPPSATVRQRSMADITFIWSRLTCPALALRHAARWSRKISATSNAGRGTAASGYAGSGSFRLFLGFLRGCGSRPSGLSTPAIMPVATRV |
Ga0210399_103190162 | 3300020581 | Soil | QLLYEIWVCAHFSQRATWPPSAAVRQRSIALMTFNRPRLTWPALARRHAAPWSRKISATSNAGRHMAAGCYVGGESFSPLSGFLPGFLRGCDSRSSGLLMLAIMPVATRV |
Ga0210399_112127392 | 3300020581 | Soil | MRRCAQSSQRSTCPPSATVRQRSMADITFIWSRLTCPALARRHAAPWSRKISATSNAGRGTAAGGYAGDGSFRLFLGFLRGCDSRSSGLSTPAIMPVATRV |
Ga0210408_109518262 | 3300021178 | Soil | ATVRQRSMADITFSWSRLTCPALALRHAVPWSRKISATSSAGRGTAAGRYAGGESLRLFLGFLRGCDNRSSGLSMPAIMPVATRV |
Ga0213876_1000098225 | 3300021384 | Plant Roots | MIVCGQSSQRATWPLSAAVRQRSMVDITFIWSRLTWPTLARRHAAPWSRKISATSSTGRDMTAGCYVGGWSFSSVGGFLPGFLRGCDSRSSGLLMLEIMPVATRV |
Ga0213876_105425672 | 3300021384 | Plant Roots | MTVCEHFSQRSTWPPSAAVRQRSMADITFNWSRLTCPALAERHAAPWSRKISATSRLGRDTAARYAGGWSVLVASALTCCIFCMSFCWGFLPFRRGCPSMSSGLSMLAIMPVATRI |
Ga0210389_106279511 | 3300021404 | Soil | MTVCEHFSQRSTCPPSAAVRQRSIADITLSWPRLIRPALAERHAAPWSRKISATSSFGRDTAAGYAGGCSVLLASVLVCGAFCCGFLGFLRGCASMSSGLLMLAIMPVATRV |
Ga0210389_114494742 | 3300021404 | Soil | TWPALARRHAAPWLRKISATSSAGRDMAAGGYAGCGALLLLLGLLRDCVSRSSGLSMLAIMPVATRV |
Ga0210386_111337492 | 3300021406 | Soil | MTTGDKHKASDSQHRLSDQVSANHMTVWAQFSQRATWPPSATVRQRSMADITFSWSRLTCPALALRHAAPWSRKISATSNAGRGTAAGGYAGDGSFRLFLGFLRGCDSRSSGLSTPAIMPVATRV |
Ga0210402_119680172 | 3300021478 | Soil | QRSMADITFIWSRLTCPALARRHAAPWSRKISATSNAGRGTAAGGYTGGGSFRLFLGFLRGCDNRSSGLSTPAIIPVATRV |
Ga0126371_120640572 | 3300021560 | Tropical Forest Soil | AAAAWHFGQCRLRQLLQAMTVLAQSSQRATWPPSAIVRQRSMADITFIWSRLTCPALALRHAAPWLRKISATSNAGRGTAAGGYAGDGSFRLFLGFLRGCDSRSSGLSTPAIMPVATRV |
Ga0224505_102104181 | 3300022214 | Sediment | MTVWVQSSQRATWPPSAAVRQRSMADITFIWSRLTCSALARRHAAPWSRKMSATSGETRSVSAASAGRDMAAGRYAGGWSFWLLLGLLRGSDNRSRGLSMPAIMPVATRV |
Ga0207692_102387511 | 3300025898 | Corn, Switchgrass And Miscanthus Rhizosphere | QRATWPPSAAVRQRSIALITFNWSRLMWPALARRHAAPWSRKISATSSAGRDTAAGGYAGCGAFLLLLGFLRDCVSRSSGLSMLAIMPVATRV |
Ga0207654_102018711 | 3300025911 | Corn Rhizosphere | TVRQRSMADITFNWSRLTRPALARRQAAPWPRKISATSSAGRDTAAGRYAGGWSFLLLPGFWRGCDSRSSGLSMAAIMPVATRV |
Ga0207709_104460451 | 3300025935 | Miscanthus Rhizosphere | MWVCEHFSQRATWPPSAAVRQPSIALMTFIWPRLTWPALARRHAAPWSRKISATSSTGRDTTVGRYAGGWTVWFAVRLFLGFFLRGCDSRSSGLSILAIMPVATRV |
Ga0207679_113702721 | 3300025945 | Corn Rhizosphere | AVLQLSIALMTFIGARLTWPALARRHAAPWSRKISATSSTGRDTTVGCYPGGWTVWFVVRLFLGFFLRGCDSRSSGLSILAIMPVATRV |
Ga0207712_115683912 | 3300025961 | Switchgrass Rhizosphere | TFSWSRLTCPALALRHAAPWLRKISATSNAGRGTAAGGYAGAGSFRLFLGFLRGCDSRSSGLSTPAIMPVATRV |
Ga0207676_106011911 | 3300026095 | Switchgrass Rhizosphere | RQRSMADITFNWSRLTWPALAERHAAPWSRRISATSSAGRDTAVGGYAGCRAFLLTFGFLRGCVSRSSGLSILAIMPVATRV |
Ga0257170_10585002 | 3300026351 | Soil | ISQLLYEIWVCAHFSQRATWPPSAAVRQRSIALMTFNWPRLTWPALARRHAAPWSRKISATSSAGRDTAPSRYAGGWSFLLFLGLLRGCDSRSSGLSMPAIMPVATRV |
Ga0257160_10538443 | 3300026489 | Soil | PSAAVRQRSMADITFSWSRLTCPALALRHAAPWLRKISATSNTGRGTAVGGYAGSGSFRLFLGFLRGCDSRSSGLSTPAIMPVATRV |
Ga0257160_11082542 | 3300026489 | Soil | LRNLPIRQLLYEIWVCAHFSQRATWPPSAAVRQRSIALMTFNWPRLTWPALARRHAAPWSRKISATSSAGRDTAPSRYAGGWSFLLFLGLLRGCDSRSSGLSMPAIMPVATRV |
Ga0209058_11378112 | 3300026536 | Soil | RATWPPSAAVRQRSMADITFNWSRLTWPALAARHAAPWSRKISATSSAGRDTVAGGYAGGGSFLLLLGFLPGFNSRSSGLSMLEIIPVATRVYRAVVSNLS |
Ga0207723_1151632 | 3300026824 | Tropical Forest Soil | PRATVRQRSMADITFSWSRLTCPALALRHAAPWSRKISATSNAGRGTAAGGYAGDGSFRLFLGFLRGCDSRSSGLSTPAIMPVATRV |
Ga0209623_10014801 | 3300026880 | Forest Soil | MTVCEHFSQRSTWPPSAAVRQRSMADITLICSRLTWPALAERHAAPWSRKISATSSFGRDTAAGYAGSCTSLRFLAVFLGRASRSSGLSTAEIKPVATWR |
Ga0207758_10262242 | 3300026895 | Tropical Forest Soil | SMADITFSWSRLTCPALALRHAAPWSRKISATSNAGRGTAAGGYAGDGSFRLFLGFLRGCDSRSSGLSTPAIMPVATRV |
Ga0207857_10719012 | 3300027019 | Tropical Forest Soil | VRQRSMADITFSWSRLTCPALALRHAAPWSRKISATSNAGRGTAAGGYAGDGSFRLFLGFLRGCDSRSSGLSTPAIMPVATRV |
Ga0207855_10135931 | 3300027039 | Tropical Forest Soil | VRQRSMALITFNWLRLTCPALALRHAAPWSRKISATSNAGRGTAAGCYAGGASFRLLLGFLRDCDSRSSGLAMPAIMPVATRV |
Ga0207726_10315532 | 3300027045 | Tropical Forest Soil | RATVRQRSMADITFSWSRLTCPALALRHAAPWSRKISATSNAGRGTAAGGYAGDGSFRLFLGFLRGCDSRSSGLSTPAIMPVATRV |
Ga0209111_10045671 | 3300027058 | Forest Soil | ATWPPSAAVRQRSIALITFNWSRLMWPALARRHAAPWSRKISATSSAGRDTAAGGYAGCGAFLLLLGFLRDCVSRSSGLSMLAIMPVATRV |
Ga0208366_10059662 | 3300027073 | Forest Soil | TFNWSRLTWPALAERHAAPWLRKISATSRAGRDMAVGGYAGCRAFLLTLGFLRDCDSRSSGLAMLAIMPVATRV |
Ga0209522_10332211 | 3300027119 | Forest Soil | QRATWPPSAAVRQRSMADITFSWSRLTCPALALRHAAPWSRKISATSSAGRDTAAGGYAGCGAFLLLLGFLRDCVSRSSGLSMLAIMPVATRV |
Ga0208368_1015022 | 3300027161 | Forest Soil | MTVCEQFSQRSTWPPSAAVRQRSMADITLICSRLTWPALAERHAAPWSRKISATSSFGRDTAAGYAGSCTSLRFLAVFLGRASRSSGLSTAEIKPVATWR |
Ga0207777_10258501 | 3300027330 | Tropical Forest Soil | RQRSIALITFNWSRLTCPALALRHAAPWSRKISATSNAGRGTAAGCYAGGASFRLLLGFLRDCDSRSSGLAMPAIMPVATRV |
Ga0209329_10862612 | 3300027605 | Forest Soil | MTVCEHFSQRSTCPPSAAVRQRSIADITLSWPRLIRPALAERHAAPWSRKISATSSFGRDTAAGYAGGCTSLRFFSAFLGLLCFGRASRSSGLSTAEIMPVATWR |
Ga0209799_10306722 | 3300027654 | Tropical Forest Soil | SAAVRQFSIADITLSWPKLTWLALAWRHAGPWSRKISATSNTGRDMAAGGYAGGGSFLFFLGLRGNDSRSSGLSMAAIMPVATRV |
Ga0209388_12046071 | 3300027655 | Vadose Zone Soil | HFGQCRLRQLLYEIWVCAHFSQRATWPPSAAVRQRSIALMTFNWPRLTWPALARRHAAPWSRKISATSSAGRDTAPSRYAGGWSFLLFLGLLRGCDSRSSGLSMPAIMPVATRV |
Ga0209626_10561212 | 3300027684 | Forest Soil | MMVCEHFSQRSTCPPSAAVRQRSIADITFNWSRLTWPALAARHAAPWPRKISATSSFGRDTAAGYAGGGSVLLASVLVCGAFCCGFLGFLRGCASMSSGLLMLAIMPVATRV |
Ga0207862_10983072 | 3300027703 | Tropical Forest Soil | TWPPSAAVRQFSIADITLSWSRLTWPALAFRHAGPWSRKISATSNAGRDIPAGGYAASGGAFLFFLAFFTGCDSRSSGLLMLEIMPVATCA |
Ga0209656_102914783 | 3300027812 | Bog Forest Soil | MIVYAQPSQRATWPPSAAVRQRSIALITFIWSRLTWPALALRHAAPWSRKISATSSNGRDIAAGGYAGSGSFRLVLGFLRGSASRSSGLSMFAIMPVATRV |
Ga0209040_105305272 | 3300027824 | Bog Forest Soil | PWHFGQCRLRQELYEIWVCAHFSQRATWPPSAAVRQRSIALMTFNWPRLTWPALARRHAAPCSRKISATSSAGRDTAPSRYAGGWSFLLFLGLLRGCDSRSSGLSMPAIMPVATRV |
(restricted) Ga0255054_106127652 | 3300027856 | Seawater | VRQRSMALITFIWSRLTWPTLARRHAAPWSRKISATSNDGRATAAGRYAGSGFFLFLGLPRGPVSTSSGLSMLAIMAVATRV |
Ga0209465_104971211 | 3300027874 | Tropical Forest Soil | AVRQRSIALITFSWSRLTWPALTERHAAPLSRKISATSSAGRDTAVDGYAGCRAFLLTFGFLRGCVSRSSGLSILAIMPVATRV |
Ga0209488_107407211 | 3300027903 | Vadose Zone Soil | CPPSAAVRQRSMADITFNWPRLTCPALAERHAAPWSRKISATSSFGRDTAAGYAGGCTSLRFFSAFLGLLCFGRASRSSGLSTAEIMPVATWR |
Ga0209526_105951551 | 3300028047 | Forest Soil | MTVCEHFSQRSTCPPSAAVRQRSIADITFNWSRLTCPALAERHAAPWSRKISATSSFGRDTAAGYAGGCTSLRFFSAFLGLLCFGRASRSSGLSTAEIMPVATWR |
Ga0222749_103666981 | 3300029636 | Soil | WPPSATVRQRSMADITFIWSRLTCPALARRHAAPWSRKISATSNAGRGTAAGGYAGGGSFWLFLGFLRGCDNRSSGLSTPAIMPVATRV |
Ga0075386_100004121 | 3300030916 | Soil | MRLCEHFSQRSTWPPSAAVRQRSMADITLICSRLTWPALAERHAAPWSRKISATSSFGRDTAAGYAGSCTSLRFLAVFLGRASRSSGLSTAEIKPVATWR |
Ga0318516_100458864 | 3300031543 | Soil | MADITFIWSRLTCPALALRHAAPWSRKRSATSNAGRDTAAGCYAGGGSLRLFLGFLRGCDSRSSGLSMPAIMPVATRV |
Ga0318541_105184262 | 3300031545 | Soil | MSVWAQSWQRAIWPPSAAVRQRSIADITFNCSRLTWPVLAARHAAPWSRKTSATSSAGRDTIAGGYAGVRAFLHLPRFLPSRSSASSGLSILAIIPVATRV |
Ga0318541_106192302 | 3300031545 | Soil | SMADITFIWSRLTCPALALRHAAPWSRKISATSNAGRDTAAGGYAGDGSLRLFLGFLRGCDSRSSGLSMPAIMPVATRV |
Ga0310887_101586642 | 3300031547 | Soil | MTVWAQLSQRATWPPSAAVRQRSIADITLSWSRLTWLALACRHAGPWSRKMSATSSTGRDTGAGGYAGAGPFSSGSGFLPGFLIGFLRGWDSKSSGLLTFAIMPVATRA |
Ga0318515_103768961 | 3300031572 | Soil | MWAQSSQRATCPPSAAVRQRSMALITFSCSRLTWPVLALRHAAPWSRKIPATSNAGRDTAVGGYAGGGSFRFFLGFLRGCDSRSSGLSMPAIIPVATRV |
Ga0310915_102554592 | 3300031573 | Soil | ATVRQRSMADITFSWSRLTCPALALRHAAPWSRKISATSNAGRGTAAGGYAGDGSFRLFLGFLRGCDSRSSGLSTPAIMPVATRV |
Ga0310915_105744042 | 3300031573 | Soil | IVRQRTMADITFIWSRLTCPALALRHAAPWSRKISATSNAGRDTAAGCYAGGGSLRLFLGFLRGCDSKSSGLSMPAIIPVATRV |
Ga0318496_108317832 | 3300031713 | Soil | MSVCEHFSQRATWPPSAAVRQRSMADITFNWSRLMCPALAARHAAPWSRKISATSSARRDTVVGCYAGGRSSLCFLGFLQGFDNRSSGLSMLAIMPVATRV |
Ga0306917_102691422 | 3300031719 | Soil | MSVCAQSWQRAIWPPSAAVRQRSIADITFNCSRLTWPVLAARHAAPWSRKTSATSSAGRDTIAGGYAGVRAFLLLPRFLPSRSSASSGLSILAIIPVATRV |
Ga0307468_1020007841 | 3300031740 | Hardwood Forest Soil | MTVLAQFSQRATWPPSAAGRQRSMADITLIWSRLTCPALALRHAAPWSRKISATSNAGRGTAAGGYAGDGSFRLFLGFLRGCDSRSSGLSTPAIMPVATRV |
Ga0306918_100462061 | 3300031744 | Soil | IVRQRSMADITFIWSRLTCPALALRHAAPWSRKISATSNAGRDTAAGGYAGDGSLRLFLGFLRGCDSRSSGLSMPAIMPVATRV |
Ga0306918_110591841 | 3300031744 | Soil | MTVCAQSSQRATWPPSAAVRQCSIALITFIWSRLTCAALALRHAAPWSRKISATSSTGRDTAVSRYAGSWAFLLLLGFLRGNDSRSSGLSMPAIRPVATRV |
Ga0306918_111149412 | 3300031744 | Soil | MSVCAQSWQRATWPPSAAVRQRSIADITFNCSRLTWPVLAARHAAPWSRKTSATSSAGRDTIAGGYAGVRAFLLLPRFLPSRSSASSGLSILAIIPVATRV |
Ga0318502_103196682 | 3300031747 | Soil | AITFNWSRLMWPALARRHAAPWSRKISATSSAGRDTAAGGYAGWGAFLLLLGFLRDCVSRSSGLSMLAIMPVATRV |
Ga0318543_104994312 | 3300031777 | Soil | ESQSLATPRHLGQCRLRQLLSAMTVSAQSSQRATWPLSAIVRQRSIADITFIWSRLTCPALALRHAAPWSRKASAASNAGQGTAAGCYAGGEWFRLFLGFL |
Ga0318498_103580782 | 3300031778 | Soil | CATWPPSAAVRQRSMAAITFNWSRPMWPALARRHAAPWSRKISATSSAGRDTAAGGYAGWGAFLLLLGFLRGCVSRSSGLSMLAIMPVATRV |
Ga0318552_106452821 | 3300031782 | Soil | MVLAQFSQRATCPPSAIVRQRSIADITFIWSRLTCPALALRHAAPWSRKISATSNAGRDTAAGGYAGDGSLRLFLGFLRGCDSRSSGLSMPAIMPVATRV |
Ga0318529_105746861 | 3300031792 | Soil | MTVRPHFSFSQRMTCPPSAAVRQRSIADITFSWPRLTCPALALRHAAPWSWKISATSNAGRGTAVGCYAGAGSLLSSAGLLPGLFFGFLRGSDSRSSGLLMFAIMSVATRV |
Ga0318497_106748701 | 3300031805 | Soil | VRQRSMADITFNWSRLMCPALAARHAAPWSRKISATSSAGRDTVVGCYAGGRSSLCFLGFLQGFDNRSSGLSMLAIMPVATRV |
Ga0310917_106478772 | 3300031833 | Soil | MSVCEHFSQRATWPPSAAVRQRSMADITFNWSRLMCPALAARHAAPWSRKISATSRAGRDTVVGCYAGGRSSLCFLGFLQGFDNRSSGLSMLAIMPVATRV |
Ga0318520_103518852 | 3300031897 | Soil | MSVCEHFSQRATWPPSAAVRQRSMADITFNWSRLMCPALAARHAAPWSRKISATSSAGRDTVVGCYAGGRSSLCFLGFLQGFDNRSSGLSMLAIMPVATRV |
Ga0310912_107605473 | 3300031941 | Soil | LAQFSQRATCPPSAIVRQRSMADITFIWSRLTCPALALRHAAPWSRKRSATSNAGRDTAAGCYAGGGSLRLFLGFLRGCDSRSSGLSMPAIMPVATRV |
Ga0310912_108419291 | 3300031941 | Soil | MCEQFSQRSTWPPSAAVRQRSMADITFNWSRLMRPALAERHAAPWSRKISATSSFGRNIAAGGYAGGCSVVVVSALGLRVLCCGFLGFLRGCPSRSSGLSILAIMPVATRV |
Ga0307479_116911442 | 3300031962 | Hardwood Forest Soil | SATVRQRSMADITFSWSRLTCPALALRHAVPWSRKTSATSNAGRGTAAGGYAGGGSFRLFLGFLRGCDSRSSGLSTPAIMPVATRV |
Ga0306922_102966201 | 3300032001 | Soil | MSVCEHFSQRATWPPSAAVRQRSMADITFNWSRLMCPALAARHAAPWSRKISATSRAGRDTVVGCYAGGRSSLCFLGFLQGFDNRSSGLSMLAIMPVAT |
Ga0310911_101486102 | 3300032035 | Soil | MSVCAQSWQRATWPPSAAVRHRSIADITFNCSRLTWPVLAARHAAPWSRKTSATSSAGRDTIAGGYAGVRAFLLLPRFLPSRSSASSGLSILAIIPVATRV |
Ga0310911_106784952 | 3300032035 | Soil | TFNWSRLTWPALARRHAAPWSRKISATSSAGRDTAAGGYAGWGALLLLLGFLRGCVSRSSGLSMLAIMPVATRV |
Ga0318553_103493202 | 3300032068 | Soil | TFNWSRPMWPALARRHAAPWSRKISATSSAGRDTAAGGYAGWGAFLLLLGFLRGCVSRSSGLSMLAIMPVATRV |
Ga0306924_109996311 | 3300032076 | Soil | DITFSWSRLTCPALALRHAAPWSRKISATSNAGRGTTAGGYAGDGSFRLFLGFLRGCDSRSSGLSTPAIMPVATRV |
Ga0318540_103179902 | 3300032094 | Soil | RTMADITFIWSRLTCPALALRHAAPWSRKISATSNAGRDTAAGCYAGGGSLRLFLGFLRGCDSKSSGLSMPAIIPVATRV |
Ga0307470_109110572 | 3300032174 | Hardwood Forest Soil | PSAAVRRRAIALITFIWSRLTCPALALRHAAPWSRKMSATSSAGRDTAVSRYAGSWAFLLLLGFLRGSDSRSSGLSMPAIMPVATRV |
Ga0307472_1017859551 | 3300032205 | Hardwood Forest Soil | AAITFNWSRLMCPALAERHAAPWSRKISATSSAGRDMPAGVYAGGGSSLCFLGFLRDCDSRSSGLSTLAIMPVATRV |
Ga0306920_1002854473 | 3300032261 | Soil | TFIWSRLTCPALALRHAAPWSRKISATSNAGRDTAAGCYAGGGSLRLFLGFLRGCDSKSSGLSMPAIIPVATRV |
Ga0318519_106840381 | 3300033290 | Soil | AVRQRSMADITLSWSRLTWPAWAERHAAPWSRKISATSSAGRGTAVGSYTGGCFCVLFPSVFLGFLRLGCDSRSSGLSTAEIIPVATWT |
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