Metagenome / Metatranscriptome Family F056296

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Overview

Basic Information
Family ID	F056296
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	50 residues
Representative Sequence	LNRSTTTNMKSIICILLSLLAVTNAVELTAENYDELTAGKTVFIKFQAPW
Number of Associated Samples	105
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Eukaryota
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	78.10 %
% of genes from short scaffolds (< 2000 bps)	86.13 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Eukaryota (66.423 % of family members)
NCBI Taxonomy ID	2759
Taxonomy	All Organisms → cellular organisms → Eukaryota

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (56.204 % of family members)
Environment Ontology (ENVO)	Unclassified (71.533 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (67.153 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 50.00% β-sheet: 0.00% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF00085	Thioredoxin	85.40

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.15 %
Unclassified	root	N/A	32.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.42 %
Unclassified	root	N/A	32.85 %
Viruses	superkingdom	All Organisms → Viruses	0.73 %

Name	Rank	Taxonomy	Distribution
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	66.42 %
Unclassified	root	N/A	32.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.85 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	7.30 %
Haptista	clade	All Organisms → cellular organisms → Eukaryota → Haptista	1.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.85 %
Stramenopiles	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles	2.92 %
Haptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta	1.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.85 %
Ochrophyta	clade	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta	2.92 %
Prymnesiophyceae	clade	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae	1.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.85 %
Bacillariophyta	phylum	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta	2.92 %
Isochrysidales	order	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales	1.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.85 %
Coscinodiscophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae	2.92 %
Noelaerhabdaceae	family	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Noelaerhabdaceae	1.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.85 %
Thalassiosirophycidae	subclass	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae	2.92 %
Emiliania	genus	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Noelaerhabdaceae → Emiliania	1.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.85 %
Thalassiosirales	order	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales	2.92 %
Emiliania huxleyi	species	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Noelaerhabdaceae → Emiliania → Emiliania huxleyi	1.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.85 %
Thalassiosiraceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae	2.92 %
Emiliania huxleyi	species	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Noelaerhabdaceae → Emiliania → Emiliania huxleyi	1.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.85 %
Thalassiosira	genus	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira	2.92 %
Emiliania huxleyi	species	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Noelaerhabdaceae → Emiliania → Emiliania huxleyi	1.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.85 %
Thalassiosira pseudonana	species	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	2.92 %
Emiliania huxleyi	species	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Noelaerhabdaceae → Emiliania → Emiliania huxleyi	1.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300008929\|Ga0103732_1015122	Not Available	1063	Open in IMG/M
3300008932\|Ga0103735_1011872	Not Available	1110	Open in IMG/M
3300008935\|Ga0103738_1010586	Not Available	1118	Open in IMG/M
3300008936\|Ga0103739_1010392	Not Available	1102	Open in IMG/M
3300008937\|Ga0103740_1007946	Not Available	1082	Open in IMG/M
3300008958\|Ga0104259_1002645	All Organisms → cellular organisms → Eukaryota	1360	Open in IMG/M
3300009023\|Ga0103928_10049097	All Organisms → cellular organisms → Eukaryota	1197	Open in IMG/M
3300009592\|Ga0115101_1789647	All Organisms → cellular organisms → Eukaryota	1084	Open in IMG/M
3300009599\|Ga0115103_1464235	All Organisms → cellular organisms → Eukaryota	689	Open in IMG/M
3300009606\|Ga0115102_10409920	All Organisms → cellular organisms → Eukaryota	626	Open in IMG/M
3300009739\|Ga0123362_1102364	All Organisms → cellular organisms → Eukaryota	1078	Open in IMG/M
3300009747\|Ga0123363_1084844	All Organisms → cellular organisms → Eukaryota	1061	Open in IMG/M
3300010404\|Ga0129323_1009890	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Noelaerhabdaceae → Emiliania → Emiliania huxleyi	558	Open in IMG/M
3300010981\|Ga0138316_11576200	All Organisms → cellular organisms → Eukaryota	538	Open in IMG/M
3300010987\|Ga0138324_10208295	All Organisms → cellular organisms → Eukaryota	906	Open in IMG/M
3300012408\|Ga0138265_1262392	Not Available	1003	Open in IMG/M
3300012412\|Ga0138266_1115295	All Organisms → cellular organisms → Eukaryota	1036	Open in IMG/M
3300012412\|Ga0138266_1471814	Not Available	1085	Open in IMG/M
3300012413\|Ga0138258_1450517	All Organisms → cellular organisms → Eukaryota → Sar	543	Open in IMG/M
3300012415\|Ga0138263_1196386	Not Available	1008	Open in IMG/M
3300012416\|Ga0138259_1437218	Not Available	1066	Open in IMG/M
3300012419\|Ga0138260_10347444	Not Available	1105	Open in IMG/M
3300012767\|Ga0138267_1239686	All Organisms → cellular organisms → Eukaryota → Sar	889	Open in IMG/M
3300016874\|Ga0186324_108609	All Organisms → cellular organisms → Eukaryota	1101	Open in IMG/M
3300016943\|Ga0186305_109283	All Organisms → cellular organisms → Eukaryota	1276	Open in IMG/M
3300018675\|Ga0193384_1024991	All Organisms → cellular organisms → Eukaryota → Haptista → Haptophyta → Prymnesiophyceae → Isochrysidales → Noelaerhabdaceae → Emiliania → Emiliania huxleyi	638	Open in IMG/M
3300018692\|Ga0192944_1013593	All Organisms → cellular organisms → Eukaryota	1087	Open in IMG/M
3300018718\|Ga0193385_1015105	All Organisms → cellular organisms → Eukaryota	893	Open in IMG/M
3300018724\|Ga0193391_1012310	All Organisms → cellular organisms → Eukaryota	1014	Open in IMG/M
3300018734\|Ga0193290_1024346	All Organisms → cellular organisms → Eukaryota	700	Open in IMG/M
3300018740\|Ga0193387_1046936	All Organisms → cellular organisms → Eukaryota	622	Open in IMG/M
3300018745\|Ga0193000_1015826	All Organisms → cellular organisms → Eukaryota	1083	Open in IMG/M
3300018762\|Ga0192963_1023339	All Organisms → cellular organisms → Eukaryota	1047	Open in IMG/M
3300018762\|Ga0192963_1052851	All Organisms → cellular organisms → Eukaryota	668	Open in IMG/M
3300018766\|Ga0193181_1026886	All Organisms → cellular organisms → Eukaryota	820	Open in IMG/M
3300018800\|Ga0193306_1021972	All Organisms → cellular organisms → Eukaryota	1000	Open in IMG/M
3300018802\|Ga0193388_1018811	All Organisms → cellular organisms → Eukaryota	1081	Open in IMG/M
3300018802\|Ga0193388_1021008	All Organisms → cellular organisms → Eukaryota	1030	Open in IMG/M
3300018821\|Ga0193412_1014611	All Organisms → cellular organisms → Eukaryota	1115	Open in IMG/M
3300018821\|Ga0193412_1019818	All Organisms → cellular organisms → Eukaryota	995	Open in IMG/M
3300018828\|Ga0193490_1046889	All Organisms → cellular organisms → Eukaryota	720	Open in IMG/M
3300018831\|Ga0192949_1089995	All Organisms → cellular organisms → Eukaryota	588	Open in IMG/M
3300018848\|Ga0192970_1027065	All Organisms → cellular organisms → Eukaryota	1063	Open in IMG/M
3300018848\|Ga0192970_1028034	All Organisms → cellular organisms → Eukaryota	1046	Open in IMG/M
3300018858\|Ga0193413_1032524	All Organisms → cellular organisms → Eukaryota	853	Open in IMG/M
3300018874\|Ga0192977_1030944	Not Available	1059	Open in IMG/M
3300018882\|Ga0193471_1026479	All Organisms → cellular organisms → Eukaryota	1098	Open in IMG/M
3300018926\|Ga0192989_10054194	All Organisms → cellular organisms → Eukaryota	1030	Open in IMG/M
3300018942\|Ga0193426_10030298	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	1088	Open in IMG/M
3300018942\|Ga0193426_10031344	All Organisms → cellular organisms → Eukaryota	1075	Open in IMG/M
3300019014\|Ga0193299_10138041	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	1018	Open in IMG/M
3300019024\|Ga0193535_10151260	All Organisms → cellular organisms → Eukaryota	753	Open in IMG/M
3300019153\|Ga0192975_10095084	All Organisms → cellular organisms → Eukaryota	1080	Open in IMG/M
3300019153\|Ga0192975_10106359	Not Available	1021	Open in IMG/M
3300019214\|Ga0180037_1172259	All Organisms → cellular organisms → Eukaryota	690	Open in IMG/M
3300021864\|Ga0063141_102783	All Organisms → cellular organisms → Eukaryota	1096	Open in IMG/M
3300021875\|Ga0063146_106976	All Organisms → cellular organisms → Eukaryota	1013	Open in IMG/M
3300021877\|Ga0063123_1024867	All Organisms → cellular organisms → Eukaryota	942	Open in IMG/M
3300021884\|Ga0063143_1010817	All Organisms → cellular organisms → Eukaryota	1018	Open in IMG/M
3300021887\|Ga0063105_1005822	All Organisms → cellular organisms → Eukaryota → Sar	1101	Open in IMG/M
3300021887\|Ga0063105_1018694	Not Available	927	Open in IMG/M
3300021890\|Ga0063090_1041741	All Organisms → cellular organisms → Eukaryota	884	Open in IMG/M
3300021891\|Ga0063093_1018926	All Organisms → cellular organisms → Eukaryota	902	Open in IMG/M
3300021893\|Ga0063142_1023230	All Organisms → cellular organisms → Eukaryota	1111	Open in IMG/M
3300021893\|Ga0063142_1034834	All Organisms → cellular organisms → Eukaryota	810	Open in IMG/M
3300021896\|Ga0063136_1017488	All Organisms → cellular organisms → Eukaryota	1064	Open in IMG/M
3300021898\|Ga0063097_1043032	Not Available	920	Open in IMG/M
3300021899\|Ga0063144_1041239	All Organisms → cellular organisms → Eukaryota	895	Open in IMG/M
3300021899\|Ga0063144_1042598	All Organisms → cellular organisms → Eukaryota	909	Open in IMG/M
3300021901\|Ga0063119_1036106	All Organisms → cellular organisms → Eukaryota	736	Open in IMG/M
3300021904\|Ga0063131_1005936	All Organisms → cellular organisms → Eukaryota	950	Open in IMG/M
3300021905\|Ga0063088_1004273	All Organisms → cellular organisms → Eukaryota	995	Open in IMG/M
3300021905\|Ga0063088_1024972	Not Available	715	Open in IMG/M
3300021910\|Ga0063100_1025432	All Organisms → cellular organisms → Eukaryota → Sar	1114	Open in IMG/M
3300021912\|Ga0063133_1010254	All Organisms → cellular organisms → Eukaryota	1055	Open in IMG/M
3300021913\|Ga0063104_1009466	All Organisms → cellular organisms → Eukaryota → Sar	1140	Open in IMG/M
3300021930\|Ga0063145_1034894	All Organisms → cellular organisms → Eukaryota	946	Open in IMG/M
3300021934\|Ga0063139_1016368	All Organisms → cellular organisms → Eukaryota	1094	Open in IMG/M
3300021950\|Ga0063101_1032732	All Organisms → cellular organisms → Eukaryota → Sar	1083	Open in IMG/M
3300030670\|Ga0307401_10133599	Not Available	1096	Open in IMG/M
3300030670\|Ga0307401_10169089	All Organisms → cellular organisms → Eukaryota	980	Open in IMG/M
3300030671\|Ga0307403_10204392	Not Available	1031	Open in IMG/M
3300030699\|Ga0307398_10178218	Not Available	1114	Open in IMG/M
3300030699\|Ga0307398_10242621	All Organisms → cellular organisms → Eukaryota	966	Open in IMG/M
3300030699\|Ga0307398_10508964	All Organisms → cellular organisms → Eukaryota	664	Open in IMG/M
3300030702\|Ga0307399_10227477	Not Available	869	Open in IMG/M
3300030709\|Ga0307400_10274722	Not Available	1067	Open in IMG/M
3300030709\|Ga0307400_10312749	All Organisms → cellular organisms → Eukaryota	997	Open in IMG/M
3300030788\|Ga0073964_10015853	All Organisms → cellular organisms → Eukaryota	895	Open in IMG/M
3300030948\|Ga0073977_1012025	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	883	Open in IMG/M
3300031005\|Ga0073974_1749650	All Organisms → cellular organisms → Eukaryota	722	Open in IMG/M
3300031036\|Ga0073978_1023144	All Organisms → cellular organisms → Eukaryota	802	Open in IMG/M
3300031037\|Ga0073979_12356409	All Organisms → cellular organisms → Eukaryota	1091	Open in IMG/M
3300031052\|Ga0073948_1956419	All Organisms → Viruses → Predicted Viral	1032	Open in IMG/M
3300031522\|Ga0307388_10310927	All Organisms → cellular organisms → Eukaryota	999	Open in IMG/M
3300031522\|Ga0307388_10593188	All Organisms → cellular organisms → Eukaryota	735	Open in IMG/M
3300031550\|Ga0307392_1007116	All Organisms → cellular organisms → Eukaryota	1102	Open in IMG/M
3300031550\|Ga0307392_1012115	Not Available	920	Open in IMG/M
3300031674\|Ga0307393_1031234	All Organisms → cellular organisms → Eukaryota	1046	Open in IMG/M
3300031709\|Ga0307385_10092918	All Organisms → cellular organisms → Eukaryota	1107	Open in IMG/M
3300031709\|Ga0307385_10199158	All Organisms → cellular organisms → Eukaryota	760	Open in IMG/M
3300031710\|Ga0307386_10143198	Not Available	1104	Open in IMG/M
3300031725\|Ga0307381_10077736	All Organisms → cellular organisms → Eukaryota	1059	Open in IMG/M
3300031729\|Ga0307391_10190104	Not Available	1071	Open in IMG/M
3300031734\|Ga0307397_10126816	Not Available	1081	Open in IMG/M
3300031734\|Ga0307397_10189959	All Organisms → cellular organisms → Eukaryota	904	Open in IMG/M
3300031737\|Ga0307387_10219683	All Organisms → cellular organisms → Eukaryota	1096	Open in IMG/M
3300031738\|Ga0307384_10147008	All Organisms → cellular organisms → Eukaryota	1008	Open in IMG/M
3300031738\|Ga0307384_10153525	All Organisms → cellular organisms → Eukaryota → Sar → Stramenopiles → Ochrophyta → Bacillariophyta → Coscinodiscophyceae → Thalassiosirophycidae → Thalassiosirales → Thalassiosiraceae → Thalassiosira → Thalassiosira pseudonana	990	Open in IMG/M
3300031739\|Ga0307383_10235546	All Organisms → cellular organisms → Eukaryota	872	Open in IMG/M
3300031739\|Ga0307383_10267095	All Organisms → cellular organisms → Eukaryota	822	Open in IMG/M
3300031742\|Ga0307395_10105365	Not Available	1139	Open in IMG/M
3300031742\|Ga0307395_10119686	All Organisms → cellular organisms → Eukaryota	1077	Open in IMG/M
3300031743\|Ga0307382_10145629	All Organisms → cellular organisms → Eukaryota	1030	Open in IMG/M
3300031743\|Ga0307382_10180836	All Organisms → cellular organisms → Eukaryota	930	Open in IMG/M
3300031750\|Ga0307389_10352640	All Organisms → cellular organisms → Eukaryota	919	Open in IMG/M
3300031750\|Ga0307389_10452620	All Organisms → cellular organisms → Eukaryota	818	Open in IMG/M
3300033572\|Ga0307390_10210274	Not Available	1122	Open in IMG/M

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.62%
Host-Associated	Host-Associated	4.38%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.62%
Human	Host-Associated → Human	4.38%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	95.62%
Digestive System	Host-Associated → Human → Digestive System	4.38%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	62.04%
Unclassified	Environmental → Aquatic → Marine → Unclassified	31.39%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	4.38%
Coastal	Environmental → Aquatic → Marine → Coastal	1.46%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	61.31%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	31.39%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	4.38%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.46%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.73%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.73%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	56.20%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	24.82%
Polar Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Polar Marine	6.57%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	4.38%
Ice Edge, Mcmurdo Sound, Antarctica	Environmental → Aquatic → Marine → Oceanic → Unclassified → Ice Edge, Mcmurdo Sound, Antarctica	3.65%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.73%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.73%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.73%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.73%
Coastal Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Coastal Water	0.73%
Ocean Water	Environmental → Aquatic → Marine → Oceanic → Unclassified → Ocean Water	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300008929	Eukaryotic and microbial communities from ice edge, McMurdo Sound, Antarctica - 1A	Environmental	Open in IMG/M
3300008932	Eukaryotic and microbial communities from ice edge, McMurdo Sound, Antarctica - 2A	Environmental	Open in IMG/M
3300008935	Eukaryotic and microbial communities from ice edge, McMurdo Sound, Antarctica - 3A	Environmental	Open in IMG/M
3300008936	Eukaryotic and microbial communities from ice edge, McMurdo Sound, Antarctica - 3B	Environmental	Open in IMG/M
3300008937	Eukaryotic and microbial communities from ice edge, McMurdo Sound, Antarctica - 3C	Environmental	Open in IMG/M
3300008958	Marine microbial communities from eastern North Pacific Ocean - P1 particle-associated	Environmental	Open in IMG/M
3300009023	Planktonic microbial communities from coastal waters of California, USA - Canon-29	Environmental	Open in IMG/M
3300009543	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009592	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_20Mar14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009599	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009606	Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M2_3um Metatranscriptome (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009739	Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_194_18m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009747	Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_197_2m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010404	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010981	Metatranscriptome of Marine eukaryotic phytoplankton communities from the Antarctic Ocean - ANT-7 (Eukaryote Community Metatranscriptome) (version 4)	Environmental	Open in IMG/M
3300010987	Metatranscriptome of Marine eukaryotic phytoplankton communities from the Antarctic Ocean - ANT-7 (Eukaryote Community Metatranscriptome) (version 6)	Environmental	Open in IMG/M
3300012394	Marine microbial and viral communities from Louisana Shelf, Gulf of Mexico - GoM_2015_C6C_201_2m (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012408	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 192hr light incubation - RNA23.A_192.20151118 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012412	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 192hr light incubation - RNA24.B_192.20151118 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012413	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA6.ICE_1m.20151110 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012415	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA15.ICE_1m.20151115 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012416	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 24hr light incubation - RNA9.A_24.20151111 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012419	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Palmer Station, Antarctica after 24hr light incubation - RNA10.B_24.20151111 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012767	Metatranscriptomics of polar marine prokaryotic and eukaryotic communities from Arthur Harbor ice station, Antarctica - RNA29.ICE_1m.20151125 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300016794	Metatranscriptome of marine eukaryotic communities from North Pacific Ocean in Standard Aquil medium with 100 uM EDTA, 12 C, 32 psu salinity and 600 ?mol photons light - Pseudo-nitzschia delicatissima UNC1205 (MMETSP1432)	Host-Associated	Open in IMG/M
3300016852	Metatranscriptome of marine eukaryotic communities from Pacific Ocean in enriched f/2 medium with seawater, 16 C, 35 psu salinity and 90 ?mol photons light - Pseudo-nitzschia fraudulenta WWA7 (MMETSP0850)	Host-Associated	Open in IMG/M
3300016874	Metatranscriptome of marine eukaryotic communities from Pacific Ocean in enriched f/2 medium with seawater, 10.6uM sodium metasilicate, 16 C, 35 psu salinity and 441 ?mol photons light - Pseudo-nitzschia fraudulenta WWA7 (MMETSP0853)	Host-Associated	Open in IMG/M
3300016927	Metatranscriptome of marine eukaryotic communities from Mediterranean Sea in f/2 medium, 20 C, 36 psu salinity and 689 ?mol photons light - Pseudo-nitzschia delicatissima B596 (MMETSP0327)	Host-Associated	Open in IMG/M
3300016943	Metatranscriptome of marine eukaryotic communities from Pacific Ocean in f/2 medium, 13 C, 21 psu salinity and 100 ?mol photons light - Pseudo-nitzschia pungens cf. cingulata (MMETSP1060)	Host-Associated	Open in IMG/M
3300016978	Metatranscriptome of marine eukaryotic communities from Mediterranean Sea in f/2 medium, 20 C, 36 psu salinity and 297 ?mol photons light - Pseudo-nitzschia arenysensis B593 (MMETSP0329)	Host-Associated	Open in IMG/M
3300018675	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_123 - TARA_N000001994 (ERX1789575-ERR1719413)	Environmental	Open in IMG/M
3300018692	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001382 (ERX1782155-ERR1712153)	Environmental	Open in IMG/M
3300018718	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_123 - TARA_N000001994 (ERX1789426-ERR1719437)	Environmental	Open in IMG/M
3300018724	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_124 - TARA_N000002036 (ERX1789589-ERR1719194)	Environmental	Open in IMG/M
3300018734	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_100 - TARA_N000001612 (ERX1789403-ERR1719254)	Environmental	Open in IMG/M
3300018740	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_123 - TARA_N000001996 (ERX1789647-ERR1719307)	Environmental	Open in IMG/M
3300018745	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_110 - TARA_N000001746 (ERX1782385-ERR1712134)	Environmental	Open in IMG/M
3300018762	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_084 - TARA_N000001006 (ERX1789586-ERR1719157)	Environmental	Open in IMG/M
3300018766	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_036 - TARA_N000000317 (ERX1789428-ERR1719465)	Environmental	Open in IMG/M
3300018800	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_102 - TARA_N000001650 (ERX1789422-ERR1719172)	Environmental	Open in IMG/M
3300018802	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_123 - TARA_N000001996 (ERX1789649-ERR1719297)	Environmental	Open in IMG/M
3300018821	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_125 - TARA_N000002021 (ERX1789489-ERR1719145)	Environmental	Open in IMG/M
3300018828	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_137 - TARA_N000002925 (ERX1789466-ERR1719252)	Environmental	Open in IMG/M
3300018831	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_082 - TARA_N000001386 (ERX1789378-ERR1719149)	Environmental	Open in IMG/M
3300018848	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_084 - TARA_N000001442 (ERX1789421-ERR1719148)	Environmental	Open in IMG/M
3300018858	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_125 - TARA_N000002021 (ERX1789628-ERR1719293)	Environmental	Open in IMG/M
3300018874	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_085 - TARA_N000001024 (ERX1809749-ERR1740115)	Environmental	Open in IMG/M
3300018882	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_135 - TARA_N000002185 (ERX1789654-ERR1719480)	Environmental	Open in IMG/M
3300018926	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_092 - TARA_N000001309 (ERX1789376-ERR1719276)	Environmental	Open in IMG/M
3300018942	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_128 - TARA_N000002295 (ERX1782357-ERR1712003)	Environmental	Open in IMG/M
3300019014	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_100 - TARA_N000001620 (ERX1789400-ERR1719204)	Environmental	Open in IMG/M
3300019024	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_152 - TARA_N000002797 (ERX1789427-ERR1719237)	Environmental	Open in IMG/M
3300019153	Metatranscriptome of marine eukaryotic protist communities collected during Tara Oceans survey from station TARA_085 - TARA_N000001019 (ERX1789708-ERR1719469)	Environmental	Open in IMG/M
3300019214	Estuarine microbial communities from the Columbia River estuary - R.1189 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021350	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 40m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021864	Metatranscriptome of Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Stratiphyt 2011 S21 C1 B12 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021875	Metatranscriptome of Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Stratiphyt 2011 S30 C1 B23 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021877	Metatranscriptome of Marine eukaryotic phytoplankton communities from the Antarctic Ocean - ANT-17 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021884	Metatranscriptome of Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Stratiphyt 2011 S25 C1 B22 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021887	Metatranscriptome of marine eukaryotic phytoplankton communities from the Arctic Ocean - ARK-132M (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021890	Metatranscriptome of marine eukaryotic phytoplankton communities from the Arctic Ocean - ARK-3M (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021891	Metatranscriptome of marine eukaryotic phytoplankton communities from the Arctic Ocean - ARK-20M (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021893	Metatranscriptome of Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Stratiphyt 2011 S23 C1 B24 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021896	Metatranscriptome of Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Stratiphyt 2011 S13 C1 B13 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021898	Metatranscriptome of marine eukaryotic phytoplankton communities from the Arctic Ocean - ARK-55S (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021899	Metatranscriptome of Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Stratiphyt 2011 S27 C1 B23 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021901	Metatranscriptome of Marine eukaryotic phytoplankton communities from the Antarctic Ocean - ANT-12 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021904	Metatranscriptome of Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Stratiphyt 2011 S5 C1 B9 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021905	Metatranscriptome of marine eukaryotic phytoplankton communities from the Arctic Ocean - ARK-2S (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021906	Metatranscriptome of marine eukaryotic phytoplankton communities from the Arctic Ocean - ARK-2M (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021910	Metatranscriptome of marine eukaryotic phytoplankton communities from the Arctic Ocean - ARK-87M (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021912	Metatranscriptome of Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Stratiphyt 2011 S7 C1 B21 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021913	Metatranscriptome of marine eukaryotic phytoplankton communities from the Arctic Ocean - ARK-130M (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021930	Metatranscriptome of Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Stratiphyt 2011 S29 C1 B24 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021934	Metatranscriptome of Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Stratiphyt 2011 S18 C1 B14 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300021950	Metatranscriptome of marine eukaryotic phytoplankton communities from the Arctic Ocean - ARK-118M (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300027859	Marine eukaryotic phytoplankton communities from Atlantic Ocean - South Atlantic ANT15 Metagenome (SPAdes)	Environmental	Open in IMG/M
3300030670	Metatranscriptome of marine eukaryotic phytoplankton communities from Antarctic Ocean - PS103-23 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030671	Metatranscriptome of marine eukaryotic phytoplankton communities from Antarctic Ocean - PS103-34 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030699	Metatranscriptome of marine eukaryotic phytoplankton communities from Antarctic Ocean - PS103-11 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030702	Metatranscriptome of marine eukaryotic phytoplankton communities from Antarctic Ocean - PS103-14 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030709	Metatranscriptome of marine eukaryotic phytoplankton communities from Antarctic Ocean - PS103-17 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030788	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E6_R_0.2 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030868	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E4_R_0.2 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030948	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E7_V_0.2 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031005	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E7_R_0.2 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031036	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E7_X_0.2 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031037	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_S2_5 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031052	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - DeepDOM_E4_X_0.2 metaT (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031522	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-3.R2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031550	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-4.R3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031674	Metatranscriptome of marine eukaryotic phytoplankton communities from Antarctic Ocean - PS103-5.R1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031709	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-2.R2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031710	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-2.R3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031725	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-1.R1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031729	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-4.R2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031734	Metatranscriptome of marine eukaryotic phytoplankton communities from Antarctic Ocean - PS103-7 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031737	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-3.R1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031738	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-2.R1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031739	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-1.R3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031742	Metatranscriptome of marine eukaryotic phytoplankton communities from Antarctic Ocean - PS103-5.R3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031743	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-1.R2 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031750	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-3.R3 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300033572	Metatranscriptome of marine eukaryotic phytoplankton communities from South Atlantic Ocean ? PS103-4.R1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0103732_10151221	3300008929	Ice Edge, Mcmurdo Sound, Antarctica	VSNNTTSNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW*
Ga0103735_10118721	3300008932	Ice Edge, Mcmurdo Sound, Antarctica	MDFMLLVVLFDTSTIIEVSNNTTSNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW*
Ga0103738_10105861	3300008935	Ice Edge, Mcmurdo Sound, Antarctica	MLLVVLFDTSTIIEVSNNTTSNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW*
Ga0103739_10103922	3300008936	Ice Edge, Mcmurdo Sound, Antarctica	SNNNTTSNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW*
Ga0103740_10079462	3300008937	Ice Edge, Mcmurdo Sound, Antarctica	LIIEVSNTTSNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW*
Ga0104259_10026452	3300008958	Ocean Water	ASMKSIISILLTLFAVSNAVELTLDNYDELTAGKTIFVKFLAPW*
Ga0103928_100490972	3300009023	Coastal Water	MKSIITILLSLLAVSNAVELTPDNYDEMVAGKTVFIKFLAPW*
Ga0115099_108060852	3300009543	Marine	MKTIISILLSLMAVANAVELTPDNFEELTAGKTVFIKFQAPW*
Ga0115101_17896471	3300009592	Marine	MKSIISLLLSLVAVSNAVELNKDNFDELTAGKTVFIKFLAPW*
Ga0115103_14642351	3300009599	Marine	QVLNRSETSNMKSIISLLLSLVAVSNAVELNKDNFDELTAGKTVFIKFLAPW*
Ga0115102_104099201	3300009606	Marine	FFVESKKTTTTMKSIVAVLISLLAVSNAVELTLENFEEKTAGKTVFIKFLAPW*
Ga0123362_11023642	3300009739	Marine	KNFLLNQSKTTTMKYIISVLLSLMAVSNAVELNQDNFDSLTAGKTVFIKFLAPW*
Ga0123363_10848442	3300009747	Marine	ESKAITSMKSIISILLTLFAVSNAVELTVDNYDELTAGKTIFVKFLAPW*
Ga0129323_10098902	3300010404	Aqueous	EHKNFLLNQSKTTTMKYIISVLLSLMAVSNAVELNQDNFDSLTAGKTVFIKFLAPW*
Ga0138316_115762002	3300010981	Marine	INRSTKPTMKSIISILLSLVAITNAVELDSSNFDELTAGKTVFIKFLAPW*
Ga0138324_102082952	3300010987	Marine	RDINRSTKPTMKSIISILLSLVAITNAVELDSSNFDELTAGKTVFIKFLAPW*
Ga0123365_10651232	3300012394	Marine	IISILLTLFAVSNAVELTLDNYDELTAGKTIFVKFLAPW*
Ga0138265_12623921	3300012408	Polar Marine	IEVSNNTTSNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW*
Ga0138265_13501282	3300012408	Polar Marine	CILLSLLAVTNAVELTAENYDELTAGKTVFIKFQAPW*
Ga0138266_11152952	3300012412	Polar Marine	EILNRSTTTNMKSIICILLSLLAVTNAVELTAENYDELTAGKTVFIKFQAPW*
Ga0138266_14718141	3300012412	Polar Marine	NNTTSNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW*
Ga0138258_14505173	3300012413	Polar Marine	EVSNNTTSNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW*
Ga0138263_11963861	3300012415	Polar Marine	IEVSNNNTTSNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW*
Ga0138259_14372181	3300012416	Polar Marine	IIEVSKNNTTSNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW*
Ga0138260_103474442	3300012419	Polar Marine	SLPEVSNNTTSNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW*
Ga0138267_12396861	3300012767	Polar Marine	SNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW*
Ga0160422_104389941	3300012919	Seawater	MKSIIAIVLSLLAVSNAVELTPDNYDEMVAGKTVFI
Ga0186354_1060302	3300016794	Host-Associated	MKSIISLFLSLMAVANAVELNADNYDELTAGKTVFIKFLAPW
Ga0186321_1070612	3300016852	Host-Associated	MKSIVAVLISLLAVSNAVELTLENFEEKTAGKTVFIKFLAPW
Ga0186324_1086091	3300016874	Host-Associated	NNTFFVESKKTTTTMKSIVAVLISLLAVSNAVELTLENFEEKTAGKTVFIKFLAPW
Ga0186393_1086452	3300016927	Host-Associated	MKSIISLFLSLMAVANAVELTADNYDELTAGKTVFIKFLAPW
Ga0186305_1092831	3300016943	Host-Associated	MKSIISILLTLFAVSNAVELTLDNYDELTAGKTIFVKFLAPW
Ga0186394_1092292	3300016978	Host-Associated	MKTIISILLSLMAVANAVELTPDNFEELTAGKTVFIKFQAPW
Ga0193384_10249911	3300018675	Marine	SKITNMKSIISILLSLVAVSNAVELTKDNFDEVTAGKTVFIKFLAPW
Ga0192944_10135931	3300018692	Marine	MKSIISLLLSLLAVSNAVELNKDNFDELTAGKTVFIKFLAPW
Ga0193385_10151051	3300018718	Marine	PNMKSIISVLLSLLAITNAVELNSDNYDELTAGKTVFIKFLAPW
Ga0193391_10123101	3300018724	Marine	RDINRSTKPTMKSIISILLSLVAITNAVELDSSNFDELTAGKTVFIKFLAPW
Ga0193290_10243461	3300018734	Marine	RSKATNMKSIISILLSLVAISNAVELNSDNFDDLTAGKTVFIKFLAPW
Ga0193387_10469361	3300018740	Marine	EKILNRSKITNMKSIVAILLSLVAVSNAVELNSNNFDELTAGKTVFIKFLAPW
Ga0193000_10158262	3300018745	Marine	MGKSIISILLSLVAITNAVELDSSNFDELTAGKTVFIKFLAPW
Ga0192963_10233391	3300018762	Marine	TLIIVILNRSTTTNMKYITSILLSLLAVTDAVELTQDNYDEKTAGKTVFIKFQAPW
Ga0192963_10528512	3300018762	Marine	MKSIIAIILSLLAVSNAVELNSENYDGLTSGKTVFIKFQAPW
Ga0193181_10268861	3300018766	Marine	KPTMKSIISILLSLVAITNAVELDSSNFDELTAGKTVFIKFLAPW
Ga0193306_10219722	3300018800	Marine	DINRSTKPTMKSIISILLSLVAITNAVELDSSNFDELTAGKTVFIKFLAPW
Ga0193388_10188112	3300018802	Marine	YEKILNRSKITNMKSIVAILLSLVAVSNAVELNSNNFDELTAGKTVFIKFLAPW
Ga0193388_10210082	3300018802	Marine	KILNRSKITNMKYIISFLLSLVAVSNAVELNSDNFDELTAGKTVFIKFLAPW
Ga0193412_10146112	3300018821	Marine	KKILNRSKITNMKYIISFLLSLVAVSNAVELNSDNFDELTAGKTVFIKFLAPW
Ga0193412_10198181	3300018821	Marine	KKILNRSKITNMKSIISILLSLVAISNAVELNSDNFDELTAGKTVFIKFLAPW
Ga0193490_10468892	3300018828	Marine	MKSIISILLSLVAITNAVELDSSNFDELTAGKTVFIKFLAPW
Ga0192949_10899952	3300018831	Marine	QVLNRSETSNMKSIISLLLSLLAVSNAVELNKDNFDELTAGKTVFIKFLAPW
Ga0192970_10270652	3300018848	Marine	KILLNQSLTTNMKYIISFLLSLVAVSTATELTPTNFDELTAGKTVLIKFLAPW
Ga0192970_10280341	3300018848	Marine	EILNRSTTTNMKSIICILLSLLAVTNAVELTAENYDELTAGKTVFIKFQAPW
Ga0193413_10325241	3300018858	Marine	EKILNRSKITNMKYIISFLLSLVAVSNAVELNSDNFDELTAGKTVFIKFLAPW
Ga0192977_10309442	3300018874	Marine	IIEVSNTTSNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW
Ga0193471_10264791	3300018882	Marine	RSTTTNMKSIITILLSLLAVTNAVELTSDNYDDMVAGKTVFIKFLAPW
Ga0192989_100541941	3300018926	Marine	RSETSNMKSIISLLLSLVAVSNAVELNKDNFDELTAGKTVFIKFLAPW
Ga0192989_100726981	3300018926	Marine	VFALLGLAAAVGAVELTAENYDELTAGKTVFIKFLAPW
Ga0193426_100302982	3300018942	Marine	TTNMKSIISLFLSLVAVSNAIELTPANFDEKTAGKTVFIKFLAPW
Ga0193426_100313441	3300018942	Marine	TNMKYIISFLLSLVAVSNAVELNSDNFDELTAGKTVFIKFLAPW
Ga0193299_101380411	3300019014	Marine	HRSTTTNMKSIISLFLSLVAVSNAIELTPANFDEKTAGKTVFIKFLAPW
Ga0193535_101512602	3300019024	Marine	KILNRSKITNMKSIISILLSLVAISNAVELNSDNFDELTAGKTVFIKFLAPW
Ga0192975_100950841	3300019153	Marine	MKYIISFLLSLVAVSTATELTTTNFDELTAGKTVLIKFLAPW
Ga0192975_101063592	3300019153	Marine	EVSNTTSNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW
Ga0180037_11722592	3300019214	Estuarine	MKSIISLLLSLVAVSNAVELNKDNFDELTAGKTVFIKFLAPW
Ga0206692_18281302	3300021350	Seawater	KGLFLLPLLAVTHAVDLNAKNFDELTAGKAAFIKFLAPW
Ga0063141_1027831	3300021864	Marine	MKSIISLLLSLVAVSNALELTTENYDEKTAGKTVFIKFLAPW
Ga0063146_1069761	3300021875	Marine	GILNRSTTSNMKYIVSILLSLLAVTNAVELTADNYDDKTAGKTVFIKFQAPW
Ga0063123_10248671	3300021877	Marine	RSKATNIMKSIISILLSLVAISNAVELNSDNFDELTAGKTVFIKFLAPW
Ga0063143_10108171	3300021884	Marine	FVESKKTTTTMKSIVAVLISLLAVSNAVELTLENFEEKTAGKTVFIKFLAPW
Ga0063105_10058221	3300021887	Marine	MKSIISILLGLMAVANAVELDSDNYDDLTAGKTVFIKFQAPW
Ga0063105_10186941	3300021887	Marine	AIDVFNNTTTTNMKSIISILLALVAIANAVELDADNYGELTAGKTVFIKFQAPW
Ga0063090_10417411	3300021890	Marine	SHRSKTTTTMKYIISALLSLLAVANAVELTQENFAEKTAGKTVFIKFLAPW
Ga0063093_10189261	3300021891	Marine	KILNRSKITNMKSIVAILLSLVAISNAVELNSDNFDELTAGKTVFIKFLAPW
Ga0063142_10232301	3300021893	Marine	TEILNRSKTIMKSIISILLSLLAVSNAVELNSGNFDELTAGKTVFIKFLAPW
Ga0063142_10271361	3300021893	Marine	IAILLSLLAVANAVELTADNYDELTAGKTVFIKFQAPW
Ga0063142_10348341	3300021893	Marine	YSHRSKTTTTMKYIISALLSLLAVANAVELTQENFAEKTAGKTVFIKFLAPW
Ga0063136_10174881	3300021896	Marine	KILNRSKITNMKYIISFLLSLVAVSNAVELNSDNFDELTAGKTVLIKFLAPW
Ga0063097_10430321	3300021898	Marine	YIIIAIDVFNNTTTTNMKSIISILLALLAIANAVELDADNYGELTAGKTVFIKFQAPW
Ga0063144_10412391	3300021899	Marine	RRQYSHRSKTTTTMKYIISALLSLLAVANAVELTQENFAEKTAGKTVFIKFLAPW
Ga0063144_10425981	3300021899	Marine	FFVESKKTTTTMKSIVAVLISLLAVSNAVELTLENFEEKTAGKTVFIKFLAPW
Ga0063119_10361061	3300021901	Marine	KSIMKPIISILFSILAVSNAVELNSNNYDELTAGKTVFIKFLAPW
Ga0063131_10059361	3300021904	Marine	KILNRSKLTNMKSIVAILLSLVAISNAVELNSDNFDEMTAGKTVFIKFLAPW
Ga0063088_10042731	3300021905	Marine	QYQRYSNRNTTNTMMKSIIAILLSLLAVANAVELTADNYDELTAGKTVFIKFQAPW
Ga0063088_10249721	3300021905	Marine	VFNNTTTTNMKSIISILLALLAIANAVELDADNYGELTAGKTVFIKFQAPW
Ga0063087_10042951	3300021906	Marine	MMKSIIAILLSLLAVANAVELTADNYDELTAGKTVFIKFQAPW
Ga0063100_10254321	3300021910	Marine	YRDILTSKYNTITNMKSIISILLGLMAVANAVELDSDNYDDLTAGKTVFIKFQAPW
Ga0063133_10102541	3300021912	Marine	QVLNRSETSNMKSIISLLLSLVAVSNAVELNKDNFDELTAGKTVFIKFLAPW
Ga0063104_10094661	3300021913	Marine	DILTSKYNTITNMKSIISILLGLMAVANAVELDSDNYDDLTAGKTVFIKFQAPW
Ga0063145_10348941	3300021930	Marine	RQYSHRSKTTTTMKYIISALLSLLAVANAVELTQENFAEKTAGKTVFIKFLAPW
Ga0063139_10163681	3300021934	Marine	IDNNTFFVESKKTTTTMKSIVAVLISLLAVSNAVELTLENFEEKTAGKTVFIKFLAPW
Ga0063101_10327321	3300021950	Marine	RDILTSKYNTITNMKSIISILLGLMAVANAVELDSDNYDDLTAGKTVFIKFQAPW
Ga0209503_104932432	3300027859	Marine	MKSIISILLSLVAITNAVELDSSNFDELTAGKTVFIKF
Ga0307401_101335991	3300030670	Marine	STIIEVSNTTSNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW
Ga0307401_101690892	3300030670	Marine	LNRSTTTNMKYITSILLSLLAVTDAVELTQDNYDEKTAGKTVFIKFQAPW
Ga0307403_102043921	3300030671	Marine	IEVSNTTSNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW
Ga0307398_101782181	3300030699	Marine	PLGFITSTIIEVSNTTSNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW
Ga0307398_102426211	3300030699	Marine	SIILEILNRSTTTNMKSIICILLSLLAVTNAVELTAENYDELTAGKTVFIKFQAPW
Ga0307398_105089641	3300030699	Marine	QYQKYSNRNTTNTMMKSIIAILLSLLAVANAVELTADNYDELTAGKTVFIKFQAPW
Ga0307399_102274772	3300030702	Marine	DVLNNTTTTNMKSIISILLALLAIANAVELDADNYGELTAGKTVFIKFQAPW
Ga0307400_102747222	3300030709	Marine	MKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW
Ga0307400_103127492	3300030709	Marine	LEILNRSTTTNMKSIICILLSLLAVTNAVELTAENYDELTAGKTVFIKFQAPW
Ga0073964_100158531	3300030788	Marine	YYTRSTTTNMKSIITILLSLLAVSNAVELTPDNYDEMVAGKTVFIKFLAPW
Ga0073940_14299082	3300030868	Marine	MKTIISILLSLMAVANAVELTSDNFEELTAGKTVFIKFLAPW
Ga0073977_10120253	3300030948	Marine	QYHRIPIDIKPITMKSIISILLSLVAVANAVELTPANFEELTAGKTVFIKFLAPW
Ga0073974_17496501	3300031005	Marine	QEHKNFLLNQSKTTTMKYIISVLLSLMAVSNAVELNQDNFDSLTAGKTVFIKFLAPW
Ga0073978_10228592	3300031036	Marine	IITILLSLLAVSNAVELTPDNYDEMVAGKTVFIKFLAPW
Ga0073978_10231441	3300031036	Marine	TTTNMKSIITILLSLLAVSNAVELTPDNYDEMVAGKTVFIKFLAPW
Ga0073979_123564091	3300031037	Marine	FILQKVSNRSEISNMKSIISILLSLVAVSNAVELNSDNFDELTAGKTVFIKFLAPW
Ga0073948_19564192	3300031052	Marine	RYSNRSTTTTMKFVLSMLLSLLAVTNAVDLTESNFDEMTAGKTVFIKFLAPW
Ga0307388_103109271	3300031522	Marine	QYQRYSNRNTTNTMMKSIIAILLSLLAVANAVELTAENYDELTAGKTVFIKFQAPW
Ga0307388_105931882	3300031522	Marine	IASIESIETTNMKSIISLLLSLVAVSNAVELNKDNYDELTAGKTVFIKFLAPW
Ga0307392_10071161	3300031550	Marine	NRKILLNQSLTTNMKYIISFLLSLVAVSTATELTTTNFDELTAGKTVLIKFLAPW
Ga0307392_10121151	3300031550	Marine	TIIEVSNTTSNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW
Ga0307393_10312342	3300031674	Marine	IILEILNRSTTTNMKSIICILLSLLAVTNAVELTAENYDELTAGKTVFIKFQAPW
Ga0307385_100929181	3300031709	Marine	KILLNQSLTTNMKYIISFLLSLVAVSTATELTTTNFDELTAGKTVLIKFLAPW
Ga0307385_101015081	3300031709	Marine	MKSIICILLSLLAVTNAVELTAENYDELTAGKTVFIKFQAPW
Ga0307385_101991581	3300031709	Marine	NIDSKYQRYSNRNTTHTMMKSIIAILLSLLAVANAVELTAENYDELTAGKTVFIKFQAPW
Ga0307386_101061633	3300031710	Marine	MKSIISLLLSLVAVSNAVELNKDNYDELTAGKTVFIKFLAPW
Ga0307386_101431981	3300031710	Marine	MKSIISILLALLAIANAVELDADNYGELTAGKTVFIKFQAPW
Ga0307386_103500551	3300031710	Marine	MMKSIIAILLSLLAVANAVELTAENYDELTAGKTVFIKFQAPW
Ga0307381_100777361	3300031725	Marine	TETSNMKSIISLLLCLLDVSNEDELNKDNFDELTAGKTVFIKFLAPW
Ga0307391_101901041	3300031729	Marine	TSNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW
Ga0307397_101268163	3300031734	Marine	LITSTIIEVSNTTSNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW
Ga0307397_101899592	3300031734	Marine	RNRKILLNQSLTTNMKYIISFLLSLVAVSTATELTTTNFDELTAGKTVLIKFLAPW
Ga0307387_102196832	3300031737	Marine	KSIILEILNRSTTTNMKSIICILLSLLAVTNAVELTAENYDELTAGKTVFIKFQAPW
Ga0307384_101470081	3300031738	Marine	YQRYSNRNTTNTMMKSIIAILLSLLAVANAVELTAENYDELTAGKTVFIKFQAPW
Ga0307384_101535252	3300031738	Marine	RVLHRSKITNMNSIISILLSLVAVSSAVELTPANFDELTGGKTVFIKFLAPW
Ga0307383_102355461	3300031739	Marine	NMKSIISLLLSLVAVSNAVELNKDNYDELTAGKTVFIKFLAPW
Ga0307383_102670951	3300031739	Marine	RYSNRNTTNTMMKSIIAILLSLLAVANAVELTAENYDELTAGKTVFIKFQAPW
Ga0307395_101053651	3300031742	Marine	CRAGSQPPLGLITSTIIEVSNNTTSNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW
Ga0307395_101196862	3300031742	Marine	NRKILLNQSLTTNMKYIISFLLSLVAVSTATELTPTNFDELTAGKTVLIKFLAPW
Ga0307382_101456291	3300031743	Marine	LNRSTTTNMKSIICILLSLLAVTNAVELTAENYDELTAGKTVFIKFQAPW
Ga0307382_101808361	3300031743	Marine	IASIESIETTNMKSIISLLLSLVAVSNAVELNKDNYAELTAGKTVFIKFLAPW
Ga0307389_103526401	3300031750	Marine	ASIESIETTNMKSIISLLLSLVAVSNAVELNKDNYDELTAGKTVFIKFLAPW
Ga0307389_104526201	3300031750	Marine	TTNTMMKSIIAILLSLLAVANAVELTAENYDELTAGKTVFIKFQAPW
Ga0307389_105414772	3300031750	Marine	ILSLLAVSNAVELNSENYDALTSGKTVFIKFQAPW
Ga0307390_102102742	3300033572	Marine	GQPPLGLITSTIIEVSNTTSNMKSIISILLAIMAIANAVELDADNYGKLTAGKTVFIKFQAPW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056296

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences